FFPE Cases
2015_04_02 Data Snapshot
FFPE description from TCGA Tissue Sample Requirements (2013)

FFPE (formalin fixed paraffin embedded) samples are not suitable for molecular analysis because the RNA and DNA are trapped in the nucleic acid-protein cross linking from the fixation process.

Table 1.  Get Full Table

Barcode UUID Date Type Category Notes
TCGA-A7-A0DB-01A-11D-A272-09 a0fd4e0e-e23b-46f0-a8d9-17d3c0235cf1 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DB-01A-11R-A277-07 b629190c-9d4b-4cb4-8b3d-c0137774cc72 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DB-01A-11R-A27D-13 8299a499-6166-4340-adc5-bd225ea35ab6 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DB-10A-02D-A272-09 b9e04a17-821c-4e9f-a161-459e74727817 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DC-01B-04D-A22N-09 532e757d-f1f4-49a8-8b7b-942f55f98d0a NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 01/09/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2008.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 02/27/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2009.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 05/17/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2010.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 07/28/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2011.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 08/08/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2012.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 09/12/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2005.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 09/20/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2006.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 09/28/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2007.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22Q-01 e781547e-415c-4656-b656-c1df8cc22fc3 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A10_1147968.tangent.copynumber.data.txt'.
TCGA-A7-A0DC-01B-04D-A22R-05 b623e1a0-b6c0-4146-bdf3-fbc35ecfdf6e NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DC-01B-04D-A22S-26 a253b105-73b8-4e33-8870-b31ccfb02847 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DC-01B-04R-A22O-07 22fe5cac-0623-4d0a-a158-f15fb5477d8f NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A0DC-01B-04R-A22P-13 42d5e036-ae73-4f11-8a2e-32a2b90eb623 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13D-01A-13D-A272-09 3e0f9b90-88f4-41f1-91b2-2f4bcdfaaebb NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13D-01A-13R-A277-07 24664b94-f5b5-4a99-a09b-66e23edf5916 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13D-01A-13R-A27D-13 f7a557cd-2ac0-46cd-bde2-c3e3a6420a22 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13D-10A-02D-A272-09 2fc0129f-0a1c-4f01-85a1-d447fc9d348b NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13E-01A-11D-A272-09 6744be0d-06f5-48a8-b0b6-8cd72bba0aea NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13E-01A-11R-A277-07 d3c9cc63-ca20-47de-b635-f843c7d3a824 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13E-01A-11R-A27D-13 46638e3b-72a3-4439-8a50-6acc7ec30c21 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13E-10A-02D-A272-09 9bd41c60-2384-4ea1-99a2-cc4a8ebf19cc NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13G-01B-04D-A22N-09 f727c1cf-fea5-4627-a20f-6a385f55d58f NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 01/09/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2008.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 02/27/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2009.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 05/17/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2010.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 07/28/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2011.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 08/08/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2012.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 09/12/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2005.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 09/20/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2006.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 09/28/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2007.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22Q-01 defdce72-fa52-4bbc-8f34-b3e9e1c3f12d 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A07_1147964.tangent.copynumber.data.txt'.
TCGA-A7-A13G-01B-04D-A22R-05 fafd9319-a6e1-4a29-8312-699276011c5c NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13G-01B-04R-A22O-07 95817802-63d7-4dd4-902f-3c61332e017c NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A13G-01B-04R-A22P-13 c7c61845-bee5-4445-993b-7f49f1920777 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-01A-11D-A272-09 a2bbb02b-3046-4633-9b5c-6ff4222a10d8 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-01A-11D-A275-01 a1eac6e1-39d3-4e29-a381-1bd7848b7bc2 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-01A-11D-A27B-05 00f17d05-c711-41e0-ab96-f2d4a2253124 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-01A-11R-A277-07 44be9bd3-c7ab-4310-898d-c462a88926d2 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-01A-11R-A27D-13 b59cdd43-6669-40e1-bd78-343589279905 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-01B-06D-A275-01 2b8ab526-01bc-4c93-b019-273a04d94c8c 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C12_1347490.tangent.copynumber.data.txt'.
TCGA-A7-A26E-10A-01D-A272-09 d2ed0f51-2c5c-44b5-97a2-b3e83b1467ed NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26E-10A-01D-A275-01 bb4f8a52-ec2b-490e-b8cb-04cd8a184b5c NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26F-01B-04D-A22N-09 7923054e-1127-4d95-b439-10098d49cb58 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 01/09/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2008.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 02/27/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2009.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 05/17/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2010.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 07/28/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2011.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 08/08/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2012.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 09/12/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2005.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 09/20/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2006.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 09/28/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2007.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22Q-01 2d32a4ba-d5da-4f17-915c-ac1c1bceac01 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_A09_1147944.tangent.copynumber.data.txt'.
TCGA-A7-A26F-01B-04D-A22R-05 2edc2d17-4e86-434d-9fd3-f5878a2a54ba NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26F-01B-04D-A22S-26 a723de1e-a9e0-487d-8d86-7aa4a062a1c2 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26F-01B-04R-A22O-07 1b907925-b33c-4e4a-96e0-65f15b4712b9 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26F-01B-04R-A22P-13 97fb255f-95e2-4874-a297-2774b4ad6f5a NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26I-01B-06D-A22N-09 0467a2fb-339a-4bd6-b5a0-8359626bc9db NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26I-01B-06R-A22O-07 e5949631-ebaf-4ec2-aac8-b0a6fd51d946 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26I-01B-06R-A22P-13 d075d69a-8edf-48a9-b986-6d50d99bdb9a NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01A-11D-A272-09 6f2b1732-2f2d-46a9-8665-9f5373768a5e NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01A-11D-A275-01 fa523b14-e71e-4e6f-a1f3-b445af1ff788 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01A-11D-A27B-05 aa9623d1-d03a-4888-93bd-c3294230eea4 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01A-11D-A27F-26 b85f1e68-6b9f-4206-aadc-cbba4b0667ba NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01A-11R-A277-07 00683b30-d386-48a8-ad29-4f4698864c66 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01A-11R-A27D-13 54db4e7a-b1b8-4797-b50b-c68fe051c1e8 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-01B-02D-A275-01 f373fd2d-5d41-4ade-ba39-f290ef8482ce 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C06_1347318.tangent.copynumber.data.txt'.
TCGA-A7-A26J-10A-01D-A272-09 14e32cc8-ff98-4842-9ab9-022358584e94 NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-10A-01D-A275-01 119c237c-94a4-4b42-9b43-3c4d325834fc NA BRCA Item is noncanonical FFPE Validation
TCGA-A7-A26J-10A-01D-A27F-26 5842ff7e-d8e4-4459-b387-b36b20d937b3 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A2QH-01B-04D-A22N-09 c738b558-9cc9-4756-bbe6-c8498008d6ad NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 01/09/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2008.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 02/27/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2009.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 05/17/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2010.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 07/28/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2011.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 08/08/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2012.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 09/12/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2005.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 09/20/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2006.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 09/28/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2007.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22Q-01 86c22622-a7fb-4c73-8d6a-40be9a307dbe 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_G04_1147836.tangent.copynumber.data.txt'.
TCGA-AC-A2QH-01B-04D-A22R-05 8a5452f6-5f95-48ce-9ff5-10c433aefb1a NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A2QH-01B-04D-A22S-26 6ca7f995-df23-4f00-9e5f-c759d44d9d39 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A2QH-01B-04R-A22O-07 eeef0334-de2a-4206-84ad-cd18e349635e NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A2QH-01B-04R-A22P-13 417748c9-a3a1-42e4-9246-aca2e11ee5ea NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3OD-01B-06D-A22N-09 be2289c3-491b-4571-b79a-6dbee48e172c NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 01/09/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2008.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 01/30/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2017.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 02/27/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2009.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 03/13/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2018.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 04/04/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2019.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 05/17/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2010.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 05/31/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2020.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 07/28/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2011.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 08/06/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2021.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 08/08/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2012.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 09/06/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2013.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 09/12/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2005.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 09/20/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2006.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 09/27/2014 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2022.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 09/28/2012 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2007.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 10/10/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2014.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 10/22/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2015.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22Q-01 339d0eca-df55-41e8-8415-9017c03018df 12/18/2013 BRCA Item flagged DNU SDRF in broad.mit.edu_BRCA.Genome_Wide_SNP_6.mage-tab.1.2016.0 flagged aliquot to be excluded for analysis based on file 'CHILE_p_TCGASNP_230_231_FFPE_N_GenomeWideSNP_6_E04_1147978.tangent.copynumber.data.txt'.
TCGA-AC-A3OD-01B-06D-A22R-05 834ff46c-1a08-42b9-a0c4-c681e1e9df38 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3OD-01B-06D-A22S-26 f80de3da-1128-4e5a-add7-6298b5169247 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3OD-01B-06R-A22O-07 89a6d94d-59fc-45aa-859a-3b24e6691fe8 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3OD-01B-06R-A22P-13 19e14c18-72ac-47fe-bfe5-fd82fb058736 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3QQ-01B-06D-A22N-09 f7f12021-2bb4-45a0-89f0-7d9b0eed60d8 NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3QQ-01B-06R-A22O-07 40263202-5826-4059-b7f4-56b1be17b65e NA BRCA Item is noncanonical FFPE Validation
TCGA-AC-A3QQ-01B-06R-A22P-13 6fcb469c-7c2e-44d7-a544-357a49eceeab NA BRCA Item is noncanonical FFPE Validation