Blacklisted Samples
2015_04_02 Data Snapshot
In certain circumstances, replicate filtering may choose the less favorable among two or more aliquots. For instance, an analyst may manually review two aliquots for a given individual and determine that one is superior. If the replicate filtering would choose the inferior sample, then the inferior sample can be added to this blacklist. This would result in the desired sample being chosen. This table lists those blacklisted samples and a reason for their being blacklisted.
Table 1. Get Full Table These samples were blacklisted and removed from the run.
| TCGA.ID | Tumor.Type | Blacklist.Reason |
|---|---|---|
| TCGA-BR-4376 | STAD | Henry Song, Chris Bristow, and Sahil Seth at Harvard GCC uncovered a sample swap for this sample. |