Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADH7	0	genome.wustl.edu	37	4	100341731	100341731	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	4	100341731	100341731	C	T	SNP	ADH7	ENST00000209665	human	ensembl	69_37n	-1	known	missense	c.820	p.V274M	0.164	pfam_ADH_C	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like	-	no_errors	ADH7	HGNC	ENSG00000196344	99	0	0.00	149	34	18.58	-	-	-
ATG2B	0	genome.wustl.edu	37	14	96797849	96797849	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	14	96797849	96797849	T	C	SNP	ATG2B	ENST00000359933	human	ensembl	69_37n	-1	known	missense	c.1594	p.N532D	0.798	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739	90	0	0.00	158	30	15.96	-	-	-
ATP2B3	0	genome.wustl.edu	37	X	152807217	152807217	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	X	152807217	152807217	G	T	SNP	ATP2B3	ENST00000263519	human	ensembl	69_37n	+1	known	missense	c.497	p.C166F	0.879	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B3	HGNC	ENSG00000067842	93	0	0.00	202	33	14.04	-	-	-
BMPR2	0	genome.wustl.edu	37	2	203242213	203242213	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	2	203242213	203242213	C	T	SNP	BMPR2	ENST00000374580	human	ensembl	69_37n	+1	known	nonsense	c.16	p.Q6*	0.233	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217	120	0	0.00	116	40	25.64	-	-	-
CDKN1B	0	genome.wustl.edu	37	12	12871146	12871147	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	12	12871146	12871147	-	C	INS	CDKN1B	ENST00000228872	human	ensembl	69_37n	+1	known	frame_shift_ins	c.373_374	p.E126fs	0.665:0.670	NULL	pfam_CDI	-	no_errors	CDKN1B	HGNC	ENSG00000111276	14	0	0.00	20	15	42.86	-	-	-
DIRAS2	0	genome.wustl.edu	37	9	93375893	93375893	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	9	93375893	93375893	G	A	SNP	DIRAS2	ENST00000375765	human	ensembl	69_37n	-1	known	missense	c.217	p.R73W	1.000	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS2	HGNC	ENSG00000165023	89	0	0.00	185	65	26.00	-	-	-
EFR3A	0	genome.wustl.edu	37	8	132998454	132998454	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	8	132998454	132998454	G	-	DEL	EFR3A	ENST00000254624	human	ensembl	69_37n	+1	known	frame_shift_del	c.1883	p.R628fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	EFR3A	HGNC	ENSG00000132294	198	0	0.00	114	47	28.14	-	-	-
FAM120C	0	genome.wustl.edu	37	X	54161503	54161503	+	Silent	SNP	T	T	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	X	54161503	54161503	T	A	SNP	FAM120C	ENST00000375180	human	ensembl	69_37n	-1	known	silent	c.1377	p.P459	0.963	NULL	NULL	-	no_errors	FAM120C	HGNC	ENSG00000184083	166	0	0.00	269	50	15.67	-	-	-
FMO1	0	genome.wustl.edu	37	1	171236862	171236862	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	1	171236862	171236862	C	A	SNP	FMO1	ENST00000354841	human	ensembl	69_37n	+1	known	missense	c.313	p.Q105K	1.000	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO1	HGNC	ENSG00000010932	102	0	0.00	289	49	14.50	-	-	-
GLT1D1	0	genome.wustl.edu	37	12	129467539	129467539	+	Silent	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	12	129467539	129467539	C	T	SNP	GLT1D1	ENST00000442111	human	ensembl	69_37n	+1	known	silent	c.945	p.N315	0.000	pfam_Glyco_trans_1	pfam_Glyco_trans_1	-	no_errors	GLT1D1	HGNC	ENSG00000151948	169	1	0.59	283	53	15.77	-	-	-
GPA33	0	genome.wustl.edu	37	1	167024281	167024281	+	Silent	SNP	G	G	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	1	167024281	167024281	G	T	SNP	GPA33	ENST00000367868	human	ensembl	69_37n	-1	known	silent	c.759	p.G253	0.003	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	GPA33	HGNC	ENSG00000143167	61	0	0.00	200	28	12.23	-	-	-
GPR98	0	genome.wustl.edu	37	5	90086905	90086905	+	Silent	SNP	T	T	C			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	5	90086905	90086905	T	C	SNP	GPR98	ENST00000405460	human	ensembl	69_37n	+1	known	silent	c.14259	p.S4753	0.993	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	177	0	0.00	393	77	16.38	-	-	-
KIF16B	0	genome.wustl.edu	37	20	16486798	16486798	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	20	16486798	16486798	C	T	SNP	KIF16B	ENST00000408042	human	ensembl	69_37n	-1	known	missense	c.737	p.S246N	1.000	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC	ENSG00000089177	38	0	0.00	81	44	35.20	-	-	-
KRT35	0	genome.wustl.edu	37	17	39633898	39633898	+	Silent	SNP	G	G	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	17	39633898	39633898	G	T	SNP	KRT35	ENST00000393989	human	ensembl	69_37n	-1	known	silent	c.1092	p.A364	0.000	pfam_F,prints_Keratin_I	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT35	HGNC	ENSG00000197079	103	0	0.00	210	110	34.27	-	-	-
LARP4B	0	genome.wustl.edu	37	10	871788	871788	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	10	871788	871788	C	A	SNP	LARP4B	ENST00000316157	human	ensembl	69_37n	-1	known	missense	c.1148	p.G383V	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929	89	0	0.00	46	54	54.00	-	-	-
LINGO2	0	genome.wustl.edu	37	9	27949369	27949369	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	9	27949369	27949369	G	T	SNP	LINGO2	ENST00000308675	human	ensembl	69_37n	-1	known	missense	c.1301	p.A434E	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO2	HGNC	ENSG00000174482	116	0	0.00	296	55	15.67	-	-	-
MDGA1	0	genome.wustl.edu	37	6	37612289	37612290	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	6	37612289	37612290	TA	-	DEL	MDGA1	ENST00000297153	human	ensembl	69_37n	-1	known	frame_shift_del	c.2397_2396	p.I799fs	0.998:1.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl,smart_MAM_dom,pfscan_MAM_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like	-	no_errors	MDGA1	HGNC	ENSG00000112139	134	0	0.00	149	26	14.69	-	-	-
MLL3	0	genome.wustl.edu	37	7	151851131	151851132	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	7	151851131	151851132	-	A	INS	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	frame_shift_ins	c.12411_12410	p.S4138fs	0.927:0.999	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	192	0	0.00	227	95	29.50	-	-	-
OR10A2	0	genome.wustl.edu	37	11	6891161	6891161	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	11	6891161	6891161	G	T	SNP	OR10A2	ENST00000307322	human	ensembl	69_37n	+1	known	missense	c.176	p.G59V	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10A2	HGNC	ENSG00000170790	173	1	0.57	496	97	16.36	-	-	-
OR4S2	0	genome.wustl.edu	37	11	55419253	55419253	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	11	55419253	55419253	G	T	SNP	OR4S2	ENST00000312422	human	ensembl	69_37n	+1	known	missense	c.874	p.V292L	0.972	pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	88	0	0.00	163	96	37.07	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	111	0	0.00	197	33	14.35	-	-	-
PKHD1	0	genome.wustl.edu	37	6	51637584	51637584	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	6	51637584	51637584	A	T	SNP	PKHD1	ENST00000371117	human	ensembl	69_37n	-1	known	missense	c.8558	p.V2853D	1.000	pfam_G8_domain	pfam_IPT_TIG_rcpt,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT_TIG_rcpt,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	140	1	0.71	116	86	42.36	-	-	-
PRSS33	0	genome.wustl.edu	37	16	2834663	2834663	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	16	2834663	2834663	C	G	SNP	PRSS33	ENST00000293851	human	ensembl	69_37n	-1	known	missense	c.825	p.Q275H	0.961	superfamily_Pept_cys/ser_Trypsin-like,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	PRSS33	HGNC	ENSG00000103355	43	0	0.00	51	23	31.08	-	-	-
PTEN	0	genome.wustl.edu	37	10	89693002	89693003	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	10	89693002	89693003	-	A	INS	PTEN	ENST00000371953	human	ensembl	69_37n	+1	known	frame_shift_ins	c.486_487	p.V165fs	1.000:1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	70	0	0.00	56	73	56.59	-	-	-
RAPGEF3	0	genome.wustl.edu	37	12	48141337	48141337	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	12	48141337	48141337	G	A	SNP	RAPGEF3	ENST00000389212	human	ensembl	69_37n	-1	known	nonsense	c.1546	p.R516*	1.000	superfamily_Ras_GEF_dom,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_DEP_dom,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF3	HGNC	ENSG00000079337	48	0	0.00	107	35	22.01	-	-	-
RPLP0P2	0	genome.wustl.edu	37	11	61404548	61404548	+	RNA	SNP	G	G	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	11	61404548	61404548	G	A	SNP	RPLP0P2	ENST00000496593	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742	48	0	0.00	82	36	30.51	-	-	-
S1PR5	0	genome.wustl.edu	37	19	10625096	10625096	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	19	10625096	10625096	C	T	SNP	S1PR5	ENST00000333430	human	ensembl	69_37n	-1	known	missense	c.592	p.V198M	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_S1P_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_EDG8_S1P_rcpt,prints_S1P_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	S1PR5	HGNC	ENSG00000180739	9	0	0.00	10	9	47.37	-	-	-
TAS2R16	0	genome.wustl.edu	37	7	122635049	122635049	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	7	122635049	122635049	G	A	SNP	TAS2R16	ENST00000249284	human	ensembl	69_37n	-1	known	missense	c.640	p.H214Y	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R16	HGNC	ENSG00000128519	125	0	0.00	269	60	18.18	-	-	-
TBL1XR1	0	genome.wustl.edu	37	3	176752091	176752091	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	3	176752091	176752091	T	C	SNP	TBL1XR1	ENST00000430069	human	ensembl	69_37n	-1	known	missense	c.1145	p.N382S	0.987	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TBL1XR1	HGNC	ENSG00000177565	142	0	0.00	187	41	17.98	-	-	-
TRIM16L	0	genome.wustl.edu	37	17	18638608	18638608	+	Silent	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	17	18638608	18638608	C	T	SNP	TRIM16L	ENST00000395902	human	ensembl	69_37n	+1	known	silent	c.1044	p.G348	0.291	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIM16L	HGNC	ENSG00000108448	173	0	0.00	267	112	29.47	-	-	-
VNN1	0	genome.wustl.edu	37	6	133015262	133015262	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	6	133015262	133015262	T	C	SNP	VNN1	ENST00000367928	human	ensembl	69_37n	-1	known	missense	c.401	p.Y134C	0.995	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299	249	0	0.00	309	65	17.38	-	-	-
VPS13D	0	genome.wustl.edu	37	1	12445347	12445347	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	1	12445347	12445347	G	A	SNP	VPS13D	ENST00000358136	human	ensembl	69_37n	+1	known	missense	c.11399	p.S3800N	1.000	NULL	pfam_VPSAP,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	116	0	0.00	103	36	25.90	-	-	-
ZBTB10	0	genome.wustl.edu	37	8	81412499	81412499	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	8	81412499	81412499	A	-	DEL	ZBTB10	ENST00000426744	human	ensembl	69_37n	+1	known	frame_shift_del	c.1743	p.R583fs	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB10	HGNC	ENSG00000205189	15	0	0.00	35	7	16.67	-	-	-
ZNF292	0	genome.wustl.edu	37	6	87865327	87865327	+	Silent	SNP	C	C	T			TCGA-A2-A0CS-01A-11D-A10Y-09	TCGA-A2-A0CS-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	fe96b832-cb86-4499-948a-5124a43d5c95	748f5a6c-a00e-4da7-a556-d5460c51923d	6	87865327	87865327	C	T	SNP	ZNF292	ENST00000369577	human	ensembl	69_37n	+1	known	silent	c.18	p.A6	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	27	0	0.00	27	9	25.00	-	-	-
