Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKRD30BL	0	genome.wustl.edu	37	2	133015302	133015302	+	RNA	SNP	T	T	G			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	2	133015302	133015302	T	G	SNP	ANKRD30BL	ENST00000470729	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046	10	0	0.00	42	25	37.31	-	-	-
ARMCX2	0	genome.wustl.edu	37	X	100911424	100911424	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	X	100911424	100911424	C	T	SNP	ARMCX2	ENST00000328766	human	ensembl	69_37n	-1	known	missense	c.1151	p.G384D	0.998	pfam_ARM-rpt_dom	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ARMCX2	HGNC	ENSG00000184867	80	0	0.00	103	66	39.05	-	-	-
BPHL	0	genome.wustl.edu	37	6	3119540	3119540	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	6	3119540	3119540	C	A	SNP	BPHL	ENST00000424847	human	ensembl	69_37n	+1	known	nonsense	c.129	p.Y43*	0.001	NULL	NULL	-	no_errors	BPHL	HGNC	ENSG00000137274	37	0	0.00	55	7	11.29	-	-	-
C7orf71	0	genome.wustl.edu	37	7	26686000	26686001	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	7	26686000	26686001	-	AA	INS	C7orf71	ENST00000409974	human	ensembl	69_37n	+1	known	frame_shift_ins	c.351_352	p.A118fs	0.769:0.680	NULL	NULL	-	no_errors	C7orf71	HGNC	ENSG00000222004	94	0	0.00	293	48	14.08	-	-	-
CELSR2	0	genome.wustl.edu	37	1	109808508	109808509	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	1	109808508	109808509	-	T	INS	CELSR2	ENST00000271332	human	ensembl	69_37n	+1	known	frame_shift_ins	c.5879_5880	p.A1962fs	1.000:0.968	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_GPCR_2_extracellular_dom	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EGF-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126	26	0	0.00	15	29	65.91	-	-	-
CFHR4	0	genome.wustl.edu	37	1	196884227	196884227	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	1	196884227	196884227	C	A	SNP	CFHR4	ENST00000367416	human	ensembl	69_37n	+1	known	missense	c.1496	p.T499K	0.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR4	HGNC	ENSG00000134365	159	0	0.00	293	82	21.87	-	-	-
CLIP4	0	genome.wustl.edu	37	2	29366667	29366667	+	Silent	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	2	29366667	29366667	C	A	SNP	CLIP4	ENST00000402240	human	ensembl	69_37n	+1	known	silent	c.741	p.I247	1.000	NULL	pfam_CAP-Gly_domain,pfam_Ankyrin_rpt,superfamily_CAP-Gly_domain,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_CAP-Gly_domain	-	no_errors	CLIP4	HGNC	ENSG00000115295	68	0	0.00	79	46	36.80	-	-	-
COL6A3	0	genome.wustl.edu	37	2	238290029	238290029	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	2	238290029	238290029	C	A	SNP	COL6A3	ENST00000295550	human	ensembl	69_37n	-1	known	nonsense	c.1426	p.E476*	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	28	0	0.00	34	13	27.66	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16955128	16955128	+	RNA	SNP	A	A	G			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	1	16955128	16955128	A	G	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.562	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	8	0	0.00	44	11	20.00	-	-	-
DGKI	0	genome.wustl.edu	37	7	137092668	137092668	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	7	137092668	137092668	G	A	SNP	DGKI	ENST00000424189	human	ensembl	69_37n	-1	known	missense	c.2906	p.A969V	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680	140	0	0.00	403	106	20.83	-	-	-
ELTD1	0	genome.wustl.edu	37	1	79358816	79358816	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	1	79358816	79358816	A	G	SNP	ELTD1	ENST00000370742	human	ensembl	69_37n	-1	known	missense	c.1808	p.L603S	0.989	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_GPS_dom,pfam_EGF-like_Ca-bd,smart_EGF-like,smart_EGF-like_Ca-bd,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	ELTD1	HGNC	ENSG00000162618	81	0	0.00	113	28	19.86	-	-	-
FAM22A	0	genome.wustl.edu	37	10	88988363	88988363	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	10	88988363	88988363	G	T	SNP	FAM22A	ENST00000451286	human	ensembl	69_37n	+1	known	missense	c.58	p.V20L	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	FAM22A	HGNC	ENSG00000184923	13	0	0.00	14	7	33.33	-	-	-
FAM9B	0	genome.wustl.edu	37	X	8998340	8998340	+	Silent	SNP	G	G	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	X	8998340	8998340	G	A	SNP	FAM9B	ENST00000327220	human	ensembl	69_37n	-1	known	silent	c.243	p.N81	0.047	pfam_Cor1/Xlr/Xmr	pfam_Cor1/Xlr/Xmr	-	no_errors	FAM9B	HGNC	ENSG00000177138	402	0	0.00	433	183	29.66	-	-	-
FAM9B	0	genome.wustl.edu	37	X	9000382	9000382	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	X	9000382	9000382	C	A	SNP	FAM9B	ENST00000327220	human	ensembl	69_37n	-1	known	missense	c.149	p.G50V	0.023	NULL	pfam_Cor1/Xlr/Xmr	-	no_errors	FAM9B	HGNC	ENSG00000177138	224	0	0.00	278	123	30.67	-	-	-
GCFC1	0	genome.wustl.edu	37	21	34127560	34127560	+	Silent	SNP	C	C	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	21	34127560	34127560	C	T	SNP	GCFC1	ENST00000331923	human	ensembl	69_37n	-1	known	silent	c.1488	p.S496	1.000	NULL	pfam_GCFC_dom	-	no_errors	GCFC1	HGNC	ENSG00000159086	56	0	0.00	118	50	29.59	-	-	-
GRIN3A	0	genome.wustl.edu	37	9	104432629	104432629	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	9	104432629	104432629	C	A	SNP	GRIN3A	ENST00000361820	human	ensembl	69_37n	-1	known	missense	c.2065	p.A689S	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	43	0	0.00	54	49	47.57	-	-	-
HIRA	0	genome.wustl.edu	37	22	19348811	19348811	+	Silent	SNP	T	T	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	22	19348811	19348811	T	C	SNP	HIRA	ENST00000263208	human	ensembl	69_37n	-1	known	silent	c.2034	p.A678	1.000	NULL	pfam_Hira,pfam_WD40_repeat,pfam_HIRA_B_motif,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	HIRA	HGNC	ENSG00000100084	108	0	0.00	288	74	20.44	-	-	-
KIAA1045	0	genome.wustl.edu	37	9	34976648	34976648	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	9	34976648	34976648	G	T	SNP	KIAA1045	ENST00000242315	human	ensembl	69_37n	+1	known	missense	c.760	p.A254S	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	KIAA1045	HGNC	ENSG00000122733	33	0	0.00	74	24	24.49	-	-	-
KLHL22	0	genome.wustl.edu	37	22	20843516	20843516	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	22	20843516	20843516	C	T	SNP	KLHL22	ENST00000444967	human	ensembl	69_37n	-1	putative	missense	c.79	p.D27N	0.004	NULL	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_stop_codon:bad_bp_length_for_coding_region	KLHL22	HGNC	ENSG00000099910	36	0	0.00	111	24	17.78	-	-	-
LHFPL4	0	genome.wustl.edu	37	3	9547779	9547779	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	3	9547779	9547779	G	T	SNP	LHFPL4	ENST00000287585	human	ensembl	69_37n	-1	known	nonsense	c.515	p.S172*	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL4	HGNC	ENSG00000156959	41	0	0.00	61	18	22.50	-	-	-
MLANA	0	genome.wustl.edu	37	9	5892543	5892543	+	Silent	SNP	G	G	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	9	5892543	5892543	G	A	SNP	MLANA	ENST00000381471	human	ensembl	69_37n	+1	known	silent	c.69	p.T23	0.038	NULL	NULL	-	no_errors	MLANA	HGNC	ENSG00000120215	35	0	0.00	80	33	29.20	-	-	-
MUC16	0	genome.wustl.edu	37	19	9091513	9091513	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	19	9091513	9091513	G	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.302	p.T101N	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	75	0	0.00	522	143	21.47	-	-	-
NETO1	0	genome.wustl.edu	37	18	70417577	70417577	+	Silent	SNP	G	G	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	18	70417577	70417577	G	T	SNP	NETO1	ENST00000327305	human	ensembl	69_37n	-1	known	silent	c.1261	p.R421	1.000	NULL	pfam_CUB,pfam_LDrepeatLR_classA_rpt,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,smart_CUB,smart_LDrepeatLR_classA_rpt,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt	-	no_errors	NETO1	HGNC	ENSG00000166342	112	0	0.00	192	95	33.10	-	-	-
NRXN2	0	genome.wustl.edu	37	11	64374729	64374729	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	11	64374729	64374729	G	A	SNP	NRXN2	ENST00000265459	human	ensembl	69_37n	-1	known	missense	c.5078	p.P1693L	0.958	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076	51	0	0.00	41	46	52.87	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123615786	123615786	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	X	123615786	123615786	C	A	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	missense	c.3745	p.A1249S	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	81	0	0.00	107	55	33.95	-	-	-
OR8H2	0	genome.wustl.edu	37	11	55873220	55873220	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	11	55873220	55873220	G	T	SNP	OR8H2	ENST00000313503	human	ensembl	69_37n	+1	known	missense	c.702	p.K234N	0.031	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR8H2	HGNC	ENSG00000181767	167	0	0.00	340	93	21.48	-	-	-
PARPBP	0	genome.wustl.edu	37	12	102572481	102572481	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	12	102572481	102572481	G	C	SNP	PARPBP	ENST00000358383	human	ensembl	69_37n	+1	known	missense	c.1117	p.A373P	1.000	NULL	NULL	-	no_errors	PARPBP	HGNC	ENSG00000185480	147	0	0.00	190	103	35.15	-	-	-
PGAP1	0	genome.wustl.edu	37	2	197709278	197709278	+	Silent	SNP	G	G	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	2	197709278	197709278	G	A	SNP	PGAP1	ENST00000354764	human	ensembl	69_37n	-1	known	silent	c.2307	p.S769	0.996	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121	14	0	0.00	41	21	33.87	-	-	-
PHRF1	0	genome.wustl.edu	37	11	607853	607853	+	Silent	SNP	G	G	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	11	607853	607853	G	C	SNP	PHRF1	ENST00000264555	human	ensembl	69_37n	+1	known	silent	c.2397	p.T799	0.061	NULL	pfam_Znf_PHD-finger,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	PHRF1	HGNC	ENSG00000070047	16	0	0.00	47	13	21.67	-	-	-
POU4F3	0	genome.wustl.edu	37	5	145718682	145718682	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	5	145718682	145718682	G	C	SNP	POU4F3	ENST00000230732	human	ensembl	69_37n	+1	known	missense	c.7	p.A3P	0.999	NULL	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,prints_POU,pfscan_Homeodomain,pfscan_POU_specific	-	no_errors	POU4F3	HGNC	ENSG00000091010	26	0	0.00	48	29	37.66	-	-	-
PPM1E	0	genome.wustl.edu	37	17	57057757	57057757	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	17	57057757	57057757	C	T	SNP	PPM1E	ENST00000308249	human	ensembl	69_37n	+1	known	missense	c.1633	p.R545C	1.000	NULL	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1E	HGNC	ENSG00000175175	51	0	0.00	203	31	13.14	-	-	-
PRRC2C	0	genome.wustl.edu	37	1	171527109	171527109	+	Nonsense_Mutation	SNP	C	C	G			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	1	171527109	171527109	C	G	SNP	PRRC2C	ENST00000392078	human	ensembl	69_37n	+1	known	nonsense	c.5858	p.S1953*	0.989	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	125	0	0.00	265	81	23.41	-	-	-
SIM1	0	genome.wustl.edu	37	6	100841453	100841453	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	6	100841453	100841453	C	T	SNP	SIM1	ENST00000262901	human	ensembl	69_37n	-1	known	missense	c.1480	p.A494T	0.950	pfam_SIM_C	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_PAS,smart_PAC,pfscan_PAS,pfscan_HLH_DNA-bd	-	no_errors	SIM1	HGNC	ENSG00000112246	23	0	0.00	59	11	15.71	-	-	-
SIRPB1	0	genome.wustl.edu	37	20	1559200	1559200	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	20	1559200	1559200	C	A	SNP	SIRPB1	ENST00000381605	human	ensembl	69_37n	-1	known	missense	c.217	p.A73S	0.003	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	SIRPB1	HGNC	ENSG00000101307	224	0	0.00	197	151	43.27	-	-	-
SOD2	0	genome.wustl.edu	37	6	160183182	160183182	+	RNA	SNP	G	G	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	6	160183182	160183182	G	C	SNP	SOD2	ENST00000535372	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SOD2	HGNC	ENSG00000112096	13	0	0.00	34	10	22.73	-	-	-
USP9X	0	genome.wustl.edu	37	X	41075185	41075185	+	Silent	SNP	T	T	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	X	41075185	41075185	T	C	SNP	USP9X	ENST00000324545	human	ensembl	69_37n	+1	known	silent	c.5365	p.L1789	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,superfamily_ARM-type_fold,pfscan_Peptidase_C19	-	no_errors	USP9X	HGNC	ENSG00000124486	63	0	0.00	87	49	36.03	-	-	-
YEATS2	0	genome.wustl.edu	37	3	183442226	183442226	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	3	183442226	183442226	G	C	SNP	YEATS2	ENST00000305135	human	ensembl	69_37n	+1	known	missense	c.557	p.G186A	0.807	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	YEATS2	HGNC	ENSG00000163872	108	0	0.00	177	65	26.86	-	-	-
ZFYVE9	0	genome.wustl.edu	37	1	52811772	52811772	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0T3-01A-21D-A10Y-09	TCGA-A2-A0T3-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0ca029bb-3b3a-48ec-8ade-5591e8e8629f	2c1a2795-e195-4f8d-a062-373aab5c50fc	1	52811772	52811772	C	T	SNP	ZFYVE9	ENST00000287727	human	ensembl	69_37n	+1	known	missense	c.4157	p.S1386L	0.998	pfam_DUF3480,pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077	73	0	0.00	46	104	69.33	-	-	-
