Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS7	0	genome.wustl.edu	37	15	79058298	79058298	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	15	79058298	79058298	T	C	SNP	ADAMTS7	ENST00000388820	human	ensembl	69_37n	-1	known	missense	c.3955	p.T1319A	0.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378	8	0	0.00	3	3	50.00	-	-	-
ANKRD12	0	genome.wustl.edu	37	18	9255050	9255051	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	18	9255050	9255051	AA	-	DEL	ANKRD12	ENST00000262126	human	ensembl	69_37n	+1	known	frame_shift_del	c.1785_1786	p.S596fs	0.892:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD12	HGNC	ENSG00000101745	18	0	0.00	10	4	28.57	-	-	-
CHTF18	0	genome.wustl.edu	37	16	845185	845186	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	16	845185	845186	TG	-	DEL	CHTF18	ENST00000317063	human	ensembl	69_37n	+1	known	frame_shift_del	c.2631_2632	p.V880fs	0.001:0.996	NULL	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_AAA+_ATPase	-	no_errors	CHTF18	HGNC	ENSG00000127586	27	0	0.00	15	2	11.76	-	-	-
DUS4L	0	genome.wustl.edu	37	7	107215657	107215657	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	7	107215657	107215657	G	T	SNP	DUS4L	ENST00000422290	human	ensembl	69_37n	+1	known	missense	c.263	p.G88V	0.999	NULL	pfam_tRNA_hU_synthase	-	no_errors	DUS4L	HGNC	ENSG00000105865	55	0	0.00	28	4	12.50	-	-	-
EHMT1	0	genome.wustl.edu	37	9	140710464	140710464	+	Silent	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	9	140710464	140710464	G	A	SNP	EHMT1	ENST00000460843	human	ensembl	69_37n	+1	known	silent	c.3324	p.A1108	0.912	pfam_Pre-SET_dom,smart_Pre-SET_Zn-bd_sub,pfscan_Pre-SET_dom	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC	ENSG00000181090	31	0	0.00	17	5	22.73	-	-	-
FAM179B	0	genome.wustl.edu	37	14	45465069	45465069	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	14	45465069	45465069	G	T	SNP	FAM179B	ENST00000361577	human	ensembl	69_37n	+1	known	missense	c.2167	p.D723Y	0.999	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	95	0	0.00	49	10	16.95	-	-	-
FBXO15	0	genome.wustl.edu	37	18	71797870	71797870	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	18	71797870	71797870	G	C	SNP	FBXO15	ENST00000419743	human	ensembl	69_37n	-1	known	nonsense	c.356	p.S119*	0.955	superfamily_F-box_dom_cyclin-like	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO15	HGNC	ENSG00000141665	60	0	0.00	31	11	26.19	-	-	-
FLI1	0	genome.wustl.edu	37	11	128628222	128628222	+	Splice_Site	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	11	128628222	128628222	G	A	SNP	FLI1	ENST00000429175	human	ensembl	69_37n	+1	known	splice_site	c.230+1	e2+1	1.000	-	-	-	no_errors	FLI1	HGNC	ENSG00000151702	48	0	0.00	25	7	21.88	-	-	-
FOLR1	0	genome.wustl.edu	37	11	71906691	71906691	+	Silent	SNP	C	C	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	11	71906691	71906691	C	T	SNP	FOLR1	ENST00000312293	human	ensembl	69_37n	+1	known	silent	c.393	p.N131	0.328	pfam_Folate_rcpt-like	pfam_Folate_rcpt-like	-	no_errors	FOLR1	HGNC	ENSG00000110195	43	0	0.00	26	10	27.78	-	-	-
FOXA1	0	genome.wustl.edu	37	14	38060747	38060748	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	14	38060747	38060748	-	T	INS	FOXA1	ENST00000250448	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1242_1241	p.L415fs	1.000:1.000	pfam_Forkhead_box_C	pfam_TF_fork_head,pfam_Fork-head_N,pfam_Forkhead_box_C,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXA1	HGNC	ENSG00000129514	55	0	0.00	31	6	16.22	-	-	-
KRI1	0	genome.wustl.edu	37	19	10676488	10676488	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	19	10676488	10676488	C	-	DEL	KRI1	ENST00000361821	human	ensembl	69_37n	-1	putative	frame_shift_del	c.79	p.A27fs	0.000	NULL	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347	10	0	0.00	4	2	33.33	-	-	-
LAMA5	0	genome.wustl.edu	37	20	60937537	60937537	+	Silent	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	20	60937537	60937537	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	69_37n	-1	known	silent	c.369	p.G123	1.000	pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	38	0	0.00	21	8	27.59	-	-	-
LUC7L2	0	genome.wustl.edu	37	7	139083442	139083445	+	Frame_Shift_Del	DEL	ATGT	ATGT	-			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	ATGT	ATGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	7	139083442	139083445	ATGT	-	DEL	LUC7L2	ENST00000541515	human	ensembl	69_37n	+1	known	frame_shift_del	c.452_453	p.D151fs	1.000:1.000	pfam_LUC7-rel	pfam_LUC7-rel	-	no_errors	LUC7L2	HGNC	ENSG00000146963	107	0	0.00	62	9	12.68	-	-	-
LYSMD1	0	genome.wustl.edu	37	1	151137721	151137721	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	1	151137721	151137721	G	A	SNP	LYSMD1	ENST00000368908	human	ensembl	69_37n	-1	known	missense	c.14	p.S5F	0.995	NULL	pfam_Peptidoglycan-bd_lysin,smart_Peptidoglycan-bd_Lysin_subgr	-	no_errors	LYSMD1	HGNC	ENSG00000163155	17	0	0.00	11	4	26.67	-	-	-
MATN2	0	genome.wustl.edu	37	8	99039661	99039661	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	8	99039661	99039661	A	C	SNP	MATN2	ENST00000254898	human	ensembl	69_37n	+1	known	missense	c.1960	p.I654L	0.004	smart_VWF_A	pfam_VWF_A,pfam_EGF-like_Ca-bd,pfam_EGF-like_dom,pfam_Matrilin_coiled-coil_trimer,smart_VWF_A,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	MATN2	HGNC	ENSG00000132561	31	0	0.00	11	6	35.29	-	-	-
MCC	0	genome.wustl.edu	37	5	112824048	112824049	+	In_Frame_Ins	INS	-	-	GCC			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	5	112824048	112824049	-	GCC	INS	MCC	ENST00000408903	human	ensembl	69_37n	-1	putative	in_frame_ins	c.64_63	p.21in_frame_insG	0.854:0.894	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	MCC	HGNC	ENSG00000171444	10	0	0.00	4	4	50.00	-	-	-
MIR635	0	genome.wustl.edu	37	17	66420616	66420616	+	RNA	SNP	C	C	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	17	66420616	66420616	C	A	SNP	MIR635	ENST00000384830	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR635	HGNC	ENSG00000207561	65	0	0.00	28	12	30.00	-	-	-
MYB	0	genome.wustl.edu	37	6	135511266	135511266	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	6	135511266	135511266	T	C	SNP	MYB	ENST00000341911	human	ensembl	69_37n	+1	known	missense	c.308	p.V103A	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513	77	0	0.00	28	5	15.15	-	-	-
NUP107	0	genome.wustl.edu	37	12	69135710	69135710	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	12	69135710	69135710	T	C	SNP	NUP107	ENST00000229179	human	ensembl	69_37n	+1	known	missense	c.2620	p.C874R	0.997	pfam_Nup84_Nup100	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581	107	0	0.00	33	12	26.67	-	-	-
OSBPL9	0	genome.wustl.edu	37	1	52227617	52227617	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	1	52227617	52227617	A	T	SNP	OSBPL9	ENST00000371710	human	ensembl	69_37n	+1	known	missense	c.806	p.H269L	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL9	HGNC	ENSG00000117859	82	0	0.00	30	5	14.29	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	55	0	0.00	28	21	42.86	-	-	-
PLD6	0	genome.wustl.edu	37	17	17106185	17106185	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	17	17106185	17106185	G	A	SNP	PLD6	ENST00000321560	human	ensembl	69_37n	-1	known	missense	c.655	p.P219S	0.054	NULL	smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD6	HGNC	ENSG00000179598	42	0	0.00	43	10	18.87	-	-	-
RBM20	0	genome.wustl.edu	37	10	112583260	112583260	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	10	112583260	112583260	G	T	SNP	RBM20	ENST00000369519	human	ensembl	69_37n	+1	known	missense	c.3339	p.M1113I	0.821	NULL	smart_Znf_U1,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	RBM20	HGNC	ENSG00000203867	31	0	0.00	11	5	31.25	-	-	-
RHOBTB1	0	genome.wustl.edu	37	10	62671216	62671216	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	10	62671216	62671216	G	A	SNP	RHOBTB1	ENST00000337910	human	ensembl	69_37n	-1	known	missense	c.85	p.R29C	1.000	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB1	HGNC	ENSG00000072422	65	0	0.00	34	15	30.61	-	-	-
SCN9A	0	genome.wustl.edu	37	2	167141168	167141171	+	Frame_Shift_Del	DEL	ACAA	ACAA	-			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	2	167141168	167141171	ACAA	-	DEL	SCN9A	ENST00000303354	human	ensembl	69_37n	-1	known	frame_shift_del	c.1772_1769	p.F590fs	1.000:0.499:0.383:1.000	pfam_DUF3451	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	47	0	0.00	40	8	16.00	-	-	-
SEC24A	0	genome.wustl.edu	37	5	133996823	133996823	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	5	133996823	133996823	G	A	SNP	SEC24A	ENST00000398844	human	ensembl	69_37n	+1	known	missense	c.112	p.A38T	0.648	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615	40	0	0.00	18	5	21.74	-	-	-
SLC6A14	0	genome.wustl.edu	37	X	115574821	115574821	+	Silent	SNP	T	T	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	X	115574821	115574821	T	C	SNP	SLC6A14	ENST00000371900	human	ensembl	69_37n	+1	known	silent	c.519	p.C173	0.998	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A14	HGNC	ENSG00000087916	53	0	0.00	24	10	29.41	-	-	-
TPRXL	0	genome.wustl.edu	37	3	14106354	14106354	+	Silent	SNP	C	C	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	3	14106354	14106354	C	T	SNP	TPRXL	ENST00000326972	human	ensembl	69_37n	+1	known	silent	c.678	p.S226	0.580	NULL	NULL	-	no_errors	TPRXL	HGNC	ENSG00000180438	8	0	0.00	3	4	57.14	-	-	-
TTYH1	0	genome.wustl.edu	37	19	54941109	54941109	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	19	54941109	54941109	C	G	SNP	TTYH1	ENST00000376531	human	ensembl	69_37n	+1	known	missense	c.857	p.T286S	1.000	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH1	HGNC	ENSG00000167614	48	0	0.00	25	4	13.79	-	-	-
ULK3	0	genome.wustl.edu	37	15	75131031	75131031	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	15	75131031	75131031	T	C	SNP	ULK3	ENST00000440863	human	ensembl	69_37n	-1	known	missense	c.1055	p.N352S	1.000	smart_MIT	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIT,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_MIT,pfscan_Prot_kinase_cat_dom	-	no_errors	ULK3	HGNC	ENSG00000140474	19	0	0.00	14	6	30.00	-	-	-
VSIG1	0	genome.wustl.edu	37	X	107310235	107310235	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	X	107310235	107310235	G	T	SNP	VSIG1	ENST00000415430	human	ensembl	69_37n	+1	known	missense	c.391	p.D131Y	0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	VSIG1	HGNC	ENSG00000101842	53	0	0.00	35	4	10.26	-	-	-
ZNF879	0	genome.wustl.edu	37	5	178459857	178459857	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A1FZ-01A-51D-A17G-09	TCGA-A2-A1FZ-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0f7038bb-fd25-468e-8bd9-dcd4312d13cb	d8d7bb7f-6f0a-4eb4-aa04-61b5bffb24e1	5	178459857	178459857	T	A	SNP	ZNF879	ENST00000444149	human	ensembl	69_37n	+1	known	missense	c.908	p.L303H	0.849	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF879	HGNC	ENSG00000234284	35	0	0.00	10	10	50.00	-	-	-
