Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACACA	0	genome.wustl.edu	37	17	35454000	35454000	+	Silent	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	35454000	35454000	A	G	SNP	ACACA	ENST00000353139	human	ensembl	69_37n	-1	known	silent	c.6822	p.P2274	0.994	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142	92	0	0.00	53	22	29.33	-	-	-
ACSS1	0	genome.wustl.edu	37	20	24988539	24988539	+	Silent	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	20	24988539	24988539	G	A	SNP	ACSS1	ENST00000323482	human	ensembl	69_37n	-1	known	silent	c.1929	p.V643	1.000	tigrfam_Ac_CoA_lig	pfam_AMP-dep_Synth/Lig,pfam_Acyl-CoA_synth_DUF3448,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930	62	0	0.00	37	31	45.59	-	-	-
ALS2	0	genome.wustl.edu	37	2	202606414	202606414	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	202606414	202606414	G	C	SNP	ALS2	ENST00000264276	human	ensembl	69_37n	-1	known	missense	c.2334	p.F778L	1.000	pfam_DH-domain,superfamily_DH-domain,pfscan_DH-domain	pfam_Reg_chr_condens,pfam_MORN,pfam_VPS9,pfam_DH-domain,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_DH-domain,smart_MORN,prints_Reg_chr_condens,pfscan_VPS9,pfscan_Reg_chr_condens,pfscan_DH-domain	-	no_errors	ALS2	HGNC	ENSG00000003393	77	0	0.00	40	36	47.37	-	-	-
ARMCX1	0	genome.wustl.edu	37	X	100809228	100809228	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	X	100809228	100809228	G	A	SNP	ARMCX1	ENST00000372829	human	ensembl	69_37n	+1	known	missense	c.1315	p.D439N	0.997	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMCX1	HGNC	ENSG00000126947	353	0	0.00	208	110	34.59	-	-	-
AXDND1	0	genome.wustl.edu	37	1	179337954	179337955	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	179337954	179337955	-	A	INS	AXDND1	ENST00000367618	human	ensembl	69_37n	+1	known	frame_shift_ins	c.117_118	p.N41fs	0.827:0.781	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779	102	0	0.00	97	23	19.17	-	-	-
BLK	0	genome.wustl.edu	37	8	11405607	11405608	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	8	11405607	11405608	-	G	INS	BLK	ENST00000259089	human	ensembl	69_37n	+1	known	frame_shift_ins	c.242_243	p.E83fs	1.000:1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	BLK	HGNC	ENSG00000136573	31	0	0.00	18	2	10.00	-	-	-
C20orf96	0	genome.wustl.edu	37	20	259038	259038	+	Silent	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	20	259038	259038	C	T	SNP	C20orf96	ENST00000360321	human	ensembl	69_37n	-1	known	silent	c.498	p.K166	0.414	NULL	NULL	-	no_errors	C20orf96	HGNC	ENSG00000196476	69	0	0.00	65	21	24.14	-	-	-
CAMSAP1	0	genome.wustl.edu	37	9	138714836	138714836	+	Silent	SNP	C	C	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	9	138714836	138714836	C	A	SNP	CAMSAP1	ENST00000409386	human	ensembl	69_37n	-1	known	silent	c.1704	p.P568	0.000	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrell-like,superfamily_CH-domain	-	no_errors	CAMSAP1	HGNC	ENSG00000130559	105	0	0.00	26	27	50.94	-	-	-
CCDC138	0	genome.wustl.edu	37	2	109489964	109489964	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	109489964	109489964	C	G	SNP	CCDC138	ENST00000295124	human	ensembl	69_37n	+1	known	missense	c.1751	p.S584C	0.982	NULL	NULL	-	no_errors	CCDC138	HGNC	ENSG00000163006	170	0	0.00	148	64	30.19	-	-	-
CCDC47	0	genome.wustl.edu	37	17	61829358	61829359	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	61829358	61829359	-	T	INS	CCDC47	ENST00000225726	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1313_1312	p.R438fs	1.000:0.998	pfam_DUF1682	pfam_DUF1682	-	no_errors	CCDC47	HGNC	ENSG00000108588	124	0	0.00	192	31	13.90	-	-	-
CCDC74A	0	genome.wustl.edu	37	2	132289293	132289293	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	132289293	132289293	T	C	SNP	CCDC74A	ENST00000295171	human	ensembl	69_37n	+1	known	missense	c.601	p.S201P	0.019	NULL	NULL	-	no_errors	CCDC74A	HGNC	ENSG00000163040	22	0	0.00	6	3	33.33	-	-	-
CCNA2	0	genome.wustl.edu	37	4	122740585	122740585	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	4	122740585	122740585	A	G	SNP	CCNA2	ENST00000274026	human	ensembl	69_37n	-1	known	missense	c.944	p.L315P	1.000	pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNA2	HGNC	ENSG00000145386	134	0	0.00	59	21	26.25	-	-	-
CDH1	0	genome.wustl.edu	37	16	68842662	68842662	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	16	68842662	68842662	C	-	DEL	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_del	c.598	p.P201fs	0.992	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	112	0	0.00	62	71	52.21	-	-	-
CDH1	0	genome.wustl.edu	37	16	68842664	68842664	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	16	68842664	68842664	C	A	SNP	CDH1	ENST00000561751	human	ensembl	69_37n	+1	known	missense	c.367	p.P123T	0.691	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,pfscan_Cadherin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CDH1	HGNC	ENSG00000039068	114	0	0.00	59	76	55.07	-	-	-
CDH1	0	genome.wustl.edu	37	16	68842665	68842665	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	16	68842665	68842665	C	G	SNP	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	missense	c.601	p.P201A	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	114	0	0.00	61	77	55.80	-	-	-
CERS6	0	genome.wustl.edu	37	2	169312982	169312982	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	169312982	169312982	C	G	SNP	CERS6	ENST00000305747	human	ensembl	69_37n	+1	known	missense	c.24	p.F8L	1.000	pirsf_Longevity_assurance_LAG1_LAC1	pfam_TLC-dom,pfam_Homeodomain,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeodomain	-	no_errors	CERS6	HGNC	ENSG00000172292	43	0	0.00	23	5	17.86	-	-	-
CTTN	0	genome.wustl.edu	37	11	70256029	70256029	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	11	70256029	70256029	G	C	SNP	CTTN	ENST00000301843	human	ensembl	69_37n	+1	known	missense	c.254	p.G85A	1.000	pfam_Hs1_Cortactin,pfscan_Hs1_Cortactin	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733	96	0	0.00	61	178	74.48	-	-	-
DUSP6	0	genome.wustl.edu	37	12	89743172	89743172	+	Silent	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	89743172	89743172	G	A	SNP	DUSP6	ENST00000279488	human	ensembl	69_37n	-1	known	silent	c.1005	p.N335	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,prints_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP6	HGNC	ENSG00000139318	104	0	0.00	42	13	23.64	-	-	-
DYNC1H1	0	genome.wustl.edu	37	14	102481649	102481649	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	14	102481649	102481649	G	A	SNP	DYNC1H1	ENST00000360184	human	ensembl	69_37n	+1	known	missense	c.7222	p.A2408T	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	42	0	0.00	45	11	19.64	-	-	-
EPHA3	0	genome.wustl.edu	37	3	89448571	89448571	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	89448571	89448571	G	A	SNP	EPHA3	ENST00000336596	human	ensembl	69_37n	+1	known	missense	c.1535	p.R512Q	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	143	0	0.00	81	52	39.10	-	-	-
FANCL	0	genome.wustl.edu	37	2	58456952	58456952	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	58456952	58456952	T	A	SNP	FANCL	ENST00000233741	human	ensembl	69_37n	-1	known	missense	c.213	p.Q71H	0.883	pfam_FancL_WD-rpt_cont_dom	pfam_FancL_WD-rpt_cont_dom	-	no_errors	FANCL	HGNC	ENSG00000115392	120	0	0.00	109	35	24.31	-	-	-
GIGYF1	0	genome.wustl.edu	37	7	100280053	100280053	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	7	100280053	100280053	C	T	SNP	GIGYF1	ENST00000275732	human	ensembl	69_37n	-1	known	missense	c.2653	p.E885K	1.000	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830	18	0	0.00	8	5	38.46	-	-	-
GLI2	0	genome.wustl.edu	37	2	121726426	121726426	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	121726426	121726426	C	G	SNP	GLI2	ENST00000361492	human	ensembl	69_37n	+1	known	missense	c.780	p.I260M	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047	24	0	0.00	15	8	34.78	-	-	-
GNPTAB	0	genome.wustl.edu	37	12	102164928	102164928	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	102164928	102164928	A	-	DEL	GNPTAB	ENST00000299314	human	ensembl	69_37n	-1	known	frame_shift_del	c.779	p.L260fs	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_HAND_2,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	181	0	0.00	161	83	33.33	-	-	-
HOOK2	0	genome.wustl.edu	37	19	12874242	12874242	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	12874242	12874242	T	-	DEL	HOOK2	ENST00000397668	human	ensembl	69_37n	-1	known	frame_shift_del	c.2014	p.M672fs	0.993	pfam_HOOK	pfam_HOOK,superfamily_UBA-like	-	no_errors	HOOK2	HGNC	ENSG00000095066	84	0	0.00	29	65	67.71	-	-	-
IL11RA	0	genome.wustl.edu	37	9	34655616	34655616	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	9	34655616	34655616	C	T	SNP	IL11RA	ENST00000318041	human	ensembl	69_37n	+1	known	nonsense	c.115	p.Q39*	1.000	smart_Ig_sub,pfscan_Ig-like	superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	IL11RA	HGNC	ENSG00000137070	41	0	0.00	21	16	43.24	-	-	-
KANSL1	0	genome.wustl.edu	37	17	44117113	44117113	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	44117113	44117113	G	-	DEL	KANSL1	ENST00000262419	human	ensembl	69_37n	-1	known	frame_shift_del	c.2158	p.R720fs	0.996	NULL	NULL	-	no_errors	KANSL1	HGNC	ENSG00000120071	123	0	0.00	115	151	53.55	-	-	-
KIAA0430	0	genome.wustl.edu	37	16	15696497	15696498	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	16	15696497	15696498	-	C	INS	KIAA0430	ENST00000344181	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3322_3321	p.P1107fs	0.001:0.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	14	0	0.00	12	11	47.83	-	-	-
KRT2	0	genome.wustl.edu	37	12	53040550	53040550	+	Silent	SNP	G	G	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	53040550	53040550	G	T	SNP	KRT2	ENST00000309680	human	ensembl	69_37n	-1	known	silent	c.1443	p.R481	0.886	pfam_F	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT2	HGNC	ENSG00000172867	246	0	0.00	295	44	12.98	-	-	-
KTN1	0	genome.wustl.edu	37	14	56130713	56130713	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	14	56130713	56130713	C	T	SNP	KTN1	ENST00000395309	human	ensembl	69_37n	+1	known	missense	c.3131	p.A1044V	1.000	NULL	NULL	-	no_errors	KTN1	HGNC	ENSG00000126777	151	0	0.00	105	53	33.54	-	-	-
LEPREL1	0	genome.wustl.edu	37	3	189705453	189705453	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	189705453	189705453	C	T	SNP	LEPREL1	ENST00000319332	human	ensembl	69_37n	-1	known	missense	c.961	p.E321K	0.935	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	LEPREL1	HGNC	ENSG00000090530	122	0	0.00	126	70	35.71	-	-	-
MCM3AP	0	genome.wustl.edu	37	21	47692480	47692480	+	Silent	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	21	47692480	47692480	G	A	SNP	MCM3AP	ENST00000291688	human	ensembl	69_37n	-1	known	silent	c.2460	p.I820	0.997	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	MCM3AP	HGNC	ENSG00000160294	92	0	0.00	27	25	48.08	-	-	-
MPP3	0	genome.wustl.edu	37	17	41888280	41888280	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	41888280	41888280	G	T	SNP	MPP3	ENST00000398389	human	ensembl	69_37n	-1	known	missense	c.1353	p.F451L	1.000	pfam_Guanylate_kin,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_Guanylate_kin	pfam_Guanylate_kin,pfam_L27_C,pfam_PDZ,pfam_SH3_2,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin	-	no_errors	MPP3	HGNC	ENSG00000161647	187	0	0.00	558	82	12.81	-	-	-
MSL3	0	genome.wustl.edu	37	X	11783719	11783719	+	Silent	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	X	11783719	11783719	C	T	SNP	MSL3	ENST00000312196	human	ensembl	69_37n	+1	known	silent	c.1042	p.L348	0.999	pfam_MRG	pfam_MRG,pfam_Tudor-knot,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	-	no_errors	MSL3	HGNC	ENSG00000005302	166	0	0.00	67	52	43.33	-	-	-
MUC4	0	genome.wustl.edu	37	3	195492266	195492266	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	195492266	195492266	C	T	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.13673	p.R4558H	0.997	pfam_AMOP,smart_AMOP,pfscan_AMOP	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	15	0	0.00	12	9	42.86	-	-	-
NFAT5	0	genome.wustl.edu	37	16	69726520	69726521	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	16	69726520	69726521	-	A	INS	NFAT5	ENST00000432919	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2792_2793	p.E932fs	0.998:0.206	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908	235	0	0.00	80	115	58.97	-	-	-
NOA1	0	genome.wustl.edu	37	4	57842681	57842681	+	Silent	SNP	C	C	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	4	57842681	57842681	C	G	SNP	NOA1	ENST00000264230	human	ensembl	69_37n	-1	known	silent	c.1071	p.T357	0.982	NULL	NULL	-	no_errors	NOA1	HGNC	ENSG00000084092	43	0	0.00	17	14	45.16	-	-	-
OR2T34	0	genome.wustl.edu	37	1	248737930	248737930	+	Silent	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	248737930	248737930	G	A	SNP	OR2T34	ENST00000328782	human	ensembl	69_37n	-1	known	silent	c.129	p.A43	0.020	pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T34	HGNC	ENSG00000183310	385	0	0.00	470	90	16.07	-	-	-
OTOP1	0	genome.wustl.edu	37	4	4199564	4199564	+	Silent	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	4	4199564	4199564	G	A	SNP	OTOP1	ENST00000296358	human	ensembl	69_37n	-1	known	silent	c.997	p.L333	0.841	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	45	0	0.00	49	21	30.00	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	186	1	0.53	162	95	36.96	-	-	-
PRR3	0	genome.wustl.edu	37	6	30529872	30529872	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	6	30529872	30529872	C	T	SNP	PRR3	ENST00000376560	human	ensembl	69_37n	+1	known	missense	c.431	p.P144L	0.950	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	PRR3	HGNC	ENSG00000204576	132	0	0.00	89	47	34.56	-	-	-
QSER1	0	genome.wustl.edu	37	11	32996910	32996911	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	11	32996910	32996911	-	A	INS	QSER1	ENST00000524678	human	ensembl	69_37n	+1	putative	frame_shift_ins	c.2150_2151	p.M720fs	0.003:0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	QSER1	HGNC	ENSG00000060749	52	0	0.00	88	19	17.76	-	-	-
RHBG	0	genome.wustl.edu	37	1	156347927	156347928	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	156347927	156347928	-	G	INS	RHBG	ENST00000368246	human	ensembl	69_37n	+1	known	frame_shift_ins	c.521_522	p.V176fs	1.000:0.995	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like,prints_RhesusRHD	-	no_errors	RHBG	HGNC	ENSG00000132677	24	0	0.00	12	2	14.29	-	-	-
RYR1	0	genome.wustl.edu	37	19	39025994	39025994	+	Silent	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	39025994	39025994	C	T	SNP	RYR1	ENST00000359596	human	ensembl	69_37n	+1	known	silent	c.11478	p.G3826	0.999	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	211	0	0.00	195	79	28.83	-	-	-
SCCPDH	0	genome.wustl.edu	37	1	246930542	246930542	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	246930542	246930542	G	T	SNP	SCCPDH	ENST00000366510	human	ensembl	69_37n	+1	known	missense	c.1230	p.L410F	1.000	pfam_Saccharopine_DH/HSpermid_syn	pfam_Saccharopine_DH/HSpermid_syn	-	no_errors	SCCPDH	HGNC	ENSG00000143653	51	0	0.00	75	16	17.58	-	-	-
SHC1	0	genome.wustl.edu	37	1	154938889	154938890	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	154938889	154938890	-	C	INS	SHC1	ENST00000448116	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1088_1087	p.V363fs	0.985:0.930	NULL	pfam_PTyr_interaction_dom,pfam_SH2,smart_PTyr_interaction_dom,smart_SH2,pfscan_PTyr_interaction_dom,pfscan_SH2,prints_PID_domain,prints_SH2	-	no_errors	SHC1	HGNC	ENSG00000160691	15	0	0.00	13	2	13.33	-	-	-
SIAE	0	genome.wustl.edu	37	11	124518025	124518025	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	11	124518025	124518025	G	C	SNP	SIAE	ENST00000263593	human	ensembl	69_37n	-1	known	missense	c.769	p.L257V	1.000	pfam_DUF303_acetylest,superfamily_Esterase_SGNH_hydro-type	pfam_DUF303_acetylest,superfamily_Esterase_SGNH_hydro-type	-	no_errors	SIAE	HGNC	ENSG00000110013	151	0	0.00	49	90	64.75	-	-	-
SLC13A1	0	genome.wustl.edu	37	7	122757567	122757567	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	7	122757567	122757567	A	T	SNP	SLC13A1	ENST00000194130	human	ensembl	69_37n	-1	known	missense	c.1608	p.N536K	1.000	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A1	HGNC	ENSG00000081800	173	0	0.00	178	36	16.82	-	-	-
SLC38A4	0	genome.wustl.edu	37	12	47173756	47173756	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	47173756	47173756	A	G	SNP	SLC38A4	ENST00000266579	human	ensembl	69_37n	-1	known	missense	c.551	p.F184S	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A4	HGNC	ENSG00000139209	229	0	0.00	148	122	45.19	-	-	-
SMG8	0	genome.wustl.edu	37	17	57288244	57288244	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	57288244	57288244	G	C	SNP	SMG8	ENST00000300917	human	ensembl	69_37n	+1	known	missense	c.832	p.E278Q	0.985	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447	112	0	0.00	93	58	38.41	-	-	-
SMTN	0	genome.wustl.edu	37	22	31487798	31487799	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	22	31487798	31487799	-	C	INS	SMTN	ENST00000347557	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1597_1598	p.S536fs	1.000:0.994	NULL	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963	17	0	0.00	3	2	40.00	-	-	-
SNORD3A	0	genome.wustl.edu	37	17	19091383	19091383	+	RNA	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	19091383	19091383	G	A	SNP	SNORD3A	ENST00000365494	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	SNORD3A	HGNC	ENSG00000202364	177	0	0.00	123	17	12.14	-	-	-
SNORD3B-2	0	genome.wustl.edu	37	17	18967436	18967436	+	RNA	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	18967436	18967436	G	A	SNP	SNORD3B-2	ENST00000364880	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.210	-	-	-	no_errors	SNORD3B-2	HGNC	ENSG00000201750	20	0	0.00	21	6	22.22	-	-	-
STAB2	0	genome.wustl.edu	37	12	104106175	104106175	+	Silent	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	104106175	104106175	A	G	SNP	STAB2	ENST00000388887	human	ensembl	69_37n	+1	known	silent	c.4365	p.S1455	0.001	smart_EGF-like_Ca-bd,smart_EGF-like,smart_Prot_inh_squash,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt,smart_EGF-like,smart_EGF_laminin,smart_Prot_inh_squash,smart_EGF-like_Ca-bd,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	116	0	0.00	107	29	21.32	-	-	-
STARD13	0	genome.wustl.edu	37	13	33859766	33859766	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	13	33859766	33859766	G	A	SNP	STARD13	ENST00000336934	human	ensembl	69_37n	-1	known	nonsense	c.10	p.Q4*	0.995	NULL	pfam_START_lipid-bd,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom	-	no_errors	STARD13	HGNC	ENSG00000133121	290	0	0.00	59	188	76.11	-	-	-
STK3	0	genome.wustl.edu	37	8	99591915	99591915	+	Silent	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	8	99591915	99591915	A	G	SNP	STK3	ENST00000419617	human	ensembl	69_37n	-1	known	silent	c.925	p.L309	0.982	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_SARAH_domain,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SARAH,pfscan_Prot_kinase_cat_dom	-	no_errors	STK3	HGNC	ENSG00000104375	318	0	0.00	1121	207	15.58	-	-	-
TBX5	0	genome.wustl.edu	37	12	114793477	114793477	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	114793477	114793477	G	C	SNP	TBX5	ENST00000310346	human	ensembl	69_37n	-1	known	missense	c.1417	p.Q473E	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225	23	0	0.00	24	19	44.19	-	-	-
TFIP11	0	genome.wustl.edu	37	22	26890837	26890837	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	22	26890837	26890837	C	T	SNP	TFIP11	ENST00000405938	human	ensembl	69_37n	-1	known	missense	c.1918	p.D640N	1.000	pfam_GCFC_dom	pfam_GCFC_dom,pfam_TIP_N,pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	TFIP11	HGNC	ENSG00000100109	142	1	0.70	95	27	22.13	-	-	-
THBS3	0	genome.wustl.edu	37	1	155171777	155171777	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	155171777	155171777	C	G	SNP	THBS3	ENST00000368378	human	ensembl	69_37n	-1	known	missense	c.1147	p.D383H	1.000	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231	77	0	0.00	42	9	17.65	-	-	-
THRAP3	0	genome.wustl.edu	37	1	36766611	36766611	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	36766611	36766611	G	A	SNP	THRAP3	ENST00000354618	human	ensembl	69_37n	+1	known	missense	c.2428	p.D810N	1.000	NULL	NULL	-	no_errors	THRAP3	HGNC	ENSG00000054118	85	0	0.00	34	30	46.88	-	-	-
TRIM24	0	genome.wustl.edu	37	7	138203954	138203954	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	7	138203954	138203954	C	T	SNP	TRIM24	ENST00000343526	human	ensembl	69_37n	+1	known	nonsense	c.652	p.Q218*	1.000	smart_Znf_B-box,pfscan_Znf_B-box	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM24	HGNC	ENSG00000122779	100	0	0.00	77	48	38.40	-	-	-
TUBGCP4	0	genome.wustl.edu	37	15	43687823	43687823	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	15	43687823	43687823	C	A	SNP	TUBGCP4	ENST00000260383	human	ensembl	69_37n	+1	known	missense	c.1108	p.Q370K	1.000	pfam_Spc97_Spc98	pfam_Spc97_Spc98	-	no_errors	TUBGCP4	HGNC	ENSG00000137822	665	0	0.00	542	196	26.56	-	-	-
WFDC2	0	genome.wustl.edu	37	20	44108611	44108611	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	20	44108611	44108611	A	G	SNP	WFDC2	ENST00000372676	human	ensembl	69_37n	+1	known	missense	c.253	p.I85V	0.000	pfam_Whey_acidic_protein_4-diS_core,superfamily_Whey_acidic_protein_4-diS_core,smart_Whey_acidic_protein_4-diS_core	pfam_Whey_acidic_protein_4-diS_core,superfamily_Whey_acidic_protein_4-diS_core,smart_Whey_acidic_protein_4-diS_core,prints_4-disulphide_core	-	no_errors	WFDC2	HGNC	ENSG00000101443	355	0	0.00	113	108	48.65	-	-	-
WSCD2	0	genome.wustl.edu	37	12	108634315	108634315	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	108634315	108634315	G	A	SNP	WSCD2	ENST00000261400	human	ensembl	69_37n	+1	known	missense	c.1339	p.G447S	1.000	NULL	pfam_WSC_carb-bd,smart_WSC_carb-bd_subgr,pfscan_WSC_carb-bd	-	no_errors	WSCD2	HGNC	ENSG00000075035	48	0	0.00	27	11	28.95	-	-	-
ZHX1	0	genome.wustl.edu	37	8	124266785	124266785	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	8	124266785	124266785	G	A	SNP	ZHX1	ENST00000297857	human	ensembl	69_37n	-1	known	missense	c.1402	p.R468W	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZHX1	HGNC	ENSG00000165156	300	0	0.00	1024	124	10.79	-	-	-
ZNF281	0	genome.wustl.edu	37	1	200376828	200376828	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	200376828	200376828	G	C	SNP	ZNF281	ENST00000294740	human	ensembl	69_37n	-1	known	missense	c.2006	p.S669C	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF281	HGNC	ENSG00000162702	120	0	0.00	69	62	47.33	-	-	-
ZNF431	0	genome.wustl.edu	37	19	21366706	21366706	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	21366706	21366706	C	T	SNP	ZNF431	ENST00000311048	human	ensembl	69_37n	+1	known	missense	c.1600	p.H534Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF431	HGNC	ENSG00000196705	212	0	0.00	224	155	40.90	-	-	-
ZNF592	0	genome.wustl.edu	37	15	85327107	85327107	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	15	85327107	85327107	C	T	SNP	ZNF592	ENST00000299927	human	ensembl	69_37n	+1	known	missense	c.1201	p.P401S	0.902	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	67	0	0.00	63	17	21.25	-	-	-
ZSWIM5	0	genome.wustl.edu	37	1	45516765	45516765	+	Silent	SNP	C	C	T			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	45516765	45516765	C	T	SNP	ZSWIM5	ENST00000359600	human	ensembl	69_37n	-1	known	silent	c.1413	p.Q471	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM5	HGNC	ENSG00000162415	149	0	0.00	107	83	43.68	-	-	-
