Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKRD27	0	genome.wustl.edu	37	19	33131213	33131214	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	19	33131213	33131214	CA	-	DEL	ANKRD27	ENST00000306065	human	ensembl	69_37n	-1	known	frame_shift_del	c.983_982	p.W328fs	1.000:1.000	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186	55	0	0.00	17	9	34.62	-	-	-
BPIFB3	0	genome.wustl.edu	37	20	31652537	31652538	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	20	31652537	31652538	-	C	INS	BPIFB3	ENST00000375494	human	ensembl	69_37n	+1	known	frame_shift_ins	c.810_811	p.K272fs	0.996:0.997	superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB3	HGNC	ENSG00000186190	53	0	0.00	18	3	14.29	-	-	-
BRAF	0	genome.wustl.edu	37	7	140439646	140439646	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	7	140439646	140439646	T	C	SNP	BRAF	ENST00000288602	human	ensembl	69_37n	-1	known	missense	c.2093	p.K698R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	BRAF	HGNC	ENSG00000157764	77	0	0.00	81	67	45.27	-	-	-
C14orf45	0	genome.wustl.edu	37	14	74489668	74489669	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	14	74489668	74489669	-	C	INS	C14orf45	ENST00000394009	human	ensembl	69_37n	+1	known	frame_shift_ins	c.106_107	p.S37fs	1.000:0.987	NULL	NULL	-	no_errors	C14orf45	HGNC	ENSG00000119636	58	0	0.00	21	3	12.50	-	-	-
CACNA1C-AS1	0	genome.wustl.edu	37	12	2786404	2786405	+	RNA	DEL	GG	GG	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	12	2786404	2786405	GG	-	DEL	CACNA1C-AS1	ENST00000501371	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CACNA1C-AS1	HGNC	ENSG00000246627	47	0	0.00	16	35	67.31	-	-	-
CACNA1C-AS1	0	genome.wustl.edu	37	12	2786413	2786413	+	RNA	DEL	C	C	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	12	2786413	2786413	C	-	DEL	CACNA1C-AS1	ENST00000501371	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CACNA1C-AS1	HGNC	ENSG00000246627	44	0	0.00	13	35	72.92	-	-	-
COL8A1	0	genome.wustl.edu	37	3	99514533	99514534	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	3	99514533	99514534	-	C	INS	COL8A1	ENST00000261037	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1788_1789	p.H598fs	0.906:0.314	NULL	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	COL8A1	HGNC	ENSG00000144810	59	0	0.00	33	4	10.81	-	-	-
CPA2	0	genome.wustl.edu	37	7	129915037	129915037	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	7	129915037	129915037	C	A	SNP	CPA2	ENST00000222481	human	ensembl	69_37n	+1	known	missense	c.535	p.H179N	1.000	pfam_Peptidase_M14,smart_Peptidase_M14,prints_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA2	HGNC	ENSG00000158516	126	0	0.00	376	87	18.79	-	-	-
DBC1	0	genome.wustl.edu	37	9	121976161	121976162	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	9	121976161	121976162	-	C	INS	DBC1	ENST00000373964	human	ensembl	69_37n	-1	known	frame_shift_ins	c.958_957	p.P319fs	0.001:0.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	DBC1	HGNC	ENSG00000078725	52	0	0.00	52	6	10.34	-	-	-
ELN	0	genome.wustl.edu	37	7	73452051	73452051	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	7	73452051	73452051	G	C	SNP	ELN	ENST00000358929	human	ensembl	69_37n	+1	known	missense	c.178	p.G60R	1.000	NULL	prints_Tropoelastin	-	no_errors	ELN	HGNC	ENSG00000049540	77	0	0.00	37	15	28.85	-	-	-
ESRP2	0	genome.wustl.edu	37	16	68266395	68266395	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	16	68266395	68266395	G	T	SNP	ESRP2	ENST00000565858	human	ensembl	69_37n	-1	known	missense	c.863	p.A288E	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom	-	no_errors	ESRP2	HGNC	ENSG00000103067	80	0	0.00	63	9	12.50	-	-	-
FAT3	0	genome.wustl.edu	37	11	92532819	92532819	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	11	92532819	92532819	G	-	DEL	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	frame_shift_del	c.6640	p.E2214fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	37	0	0.00	35	28	41.79	-	-	-
FGF9	0	genome.wustl.edu	37	13	22255226	22255226	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	13	22255226	22255226	G	A	SNP	FGF9	ENST00000382353	human	ensembl	69_37n	+1	known	missense	c.323	p.R108Q	1.000	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	-	no_errors	FGF9	HGNC	ENSG00000102678	225	0	0.00	186	25	11.85	-	-	-
HOXA9	0	genome.wustl.edu	37	7	27208959	27208959	+	RNA	DEL	G	G	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	7	27208959	27208959	G	-	DEL	HOXA9	ENST00000497089	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HOXA9	HGNC	ENSG00000078399	21	0	0.00	8	2	20.00	-	-	-
KIAA1107	0	genome.wustl.edu	37	1	92649706	92649706	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	1	92649706	92649706	T	-	DEL	KIAA1107	ENST00000409154	human	ensembl	69_37n	+1	known	frame_shift_del	c.4049	p.L1350fs	1.000	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	71	0	0.00	63	37	37.00	-	-	-
KLHL34	0	genome.wustl.edu	37	X	21674481	21674481	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	X	21674481	21674481	C	-	DEL	KLHL34	ENST00000379499	human	ensembl	69_37n	-1	known	frame_shift_del	c.1426	p.V476fs	0.031	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915	28	0	0.00	4	2	33.33	-	-	-
LRIG1	0	genome.wustl.edu	37	3	66436432	66436433	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	3	66436432	66436433	-	C	INS	LRIG1	ENST00000273261	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1762_1761	p.S587fs	1.000:1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LRIG1	HGNC	ENSG00000144749	122	0	0.00	164	127	43.64	-	-	-
LRRN4	0	genome.wustl.edu	37	20	6025283	6025283	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	20	6025283	6025283	G	A	SNP	LRRN4	ENST00000378858	human	ensembl	69_37n	-1	known	nonsense	c.904	p.Q302*	0.919	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4	HGNC	ENSG00000125872	222	1	0.45	53	115	68.45	-	-	-
MIR548D2	0	genome.wustl.edu	37	17	65467663	65467664	+	RNA	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	17	65467663	65467664	-	C	INS	MIR548D2	ENST00000384955	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.295:0.292	-	-	-	no_errors	MIR548D2	HGNC	ENSG00000207688	113	0	0.00	3	3	50.00	-	-	-
MTUS2	0	genome.wustl.edu	37	13	29599116	29599117	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	13	29599116	29599117	-	C	INS	MTUS2	ENST00000431530	human	ensembl	69_37n	+1	known	frame_shift_ins	c.311_312	p.L105fs	0.478:0.460	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	108	0	0.00	18	2	10.00	-	-	-
MYH13	0	genome.wustl.edu	37	17	10216067	10216068	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	17	10216067	10216068	-	T	INS	MYH13	ENST00000252172	human	ensembl	69_37n	-1	known	frame_shift_ins	c.4189_4188	p.L1396fs	1.000:0.998	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH13	HGNC	ENSG00000006788	134	0	0.00	61	18	22.78	-	-	-
PLEKHH1	0	genome.wustl.edu	37	14	68038517	68038517	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	14	68038517	68038517	T	-	DEL	PLEKHH1	ENST00000329153	human	ensembl	69_37n	+1	known	frame_shift_del	c.1483	p.S495fs	1.000	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690	95	0	0.00	41	22	33.85	-	-	-
PMPCA	0	genome.wustl.edu	37	9	139316462	139316462	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	9	139316462	139316462	A	C	SNP	PMPCA	ENST00000444897	human	ensembl	69_37n	+1	known	missense	c.566	p.Q189P	0.000	NULL	pfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd	-	no_start_codon	PMPCA	HGNC	ENSG00000165688	9	0	0.00	4	38	90.48	-	-	-
POLR3GL	0	genome.wustl.edu	37	1	145457994	145457994	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	1	145457994	145457994	C	T	SNP	POLR3GL	ENST00000369314	human	ensembl	69_37n	-1	known	missense	c.266	p.R89H	1.000	pfam_RNA_pol_III_Rpc31	pfam_RNA_pol_III_Rpc31	-	no_errors	POLR3GL	HGNC	ENSG00000121851	115	0	0.00	161	20	11.05	-	-	-
PPP1R3F	0	genome.wustl.edu	37	X	49126982	49126983	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	X	49126982	49126983	-	G	INS	PPP1R3F	ENST00000055335	human	ensembl	69_37n	+1	known	frame_shift_ins	c.650_651	p.I217fs	1.000:0.999	pfam_CBM_21,pfscan_CBM_21	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3F	HGNC	ENSG00000049769	20	0	0.00	7	6	46.15	-	-	-
PRKCD	0	genome.wustl.edu	37	3	53217170	53217171	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	3	53217170	53217171	-	G	INS	PRKCD	ENST00000330452	human	ensembl	69_37n	+1	known	frame_shift_ins	c.605_606	p.D202fs	1.000:1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCD	HGNC	ENSG00000163932	84	0	0.00	41	41	50.00	-	-	-
RALGAPA2	0	genome.wustl.edu	37	20	20517353	20517353	+	Silent	SNP	G	G	A			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	20	20517353	20517353	G	A	SNP	RALGAPA2	ENST00000202677	human	ensembl	69_37n	-1	known	silent	c.3361	p.L1121	0.836	superfamily_ARM-type_fold	pfam_Rap_GAP,superfamily_ARM-type_fold,pfscan_Rap_GAP	-	no_errors	RALGAPA2	HGNC	ENSG00000188559	148	0	0.00	74	26	26.00	-	-	-
SLC2A5	0	genome.wustl.edu	37	1	9101751	9101751	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	1	9101751	9101751	G	A	SNP	SLC2A5	ENST00000377414	human	ensembl	69_37n	-1	known	missense	c.664	p.L222F	0.000	pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Fru_transpt_5,prints_Sugar/inositol_transpt	-	no_errors	SLC2A5	HGNC	ENSG00000142583	75	0	0.00	35	14	28.57	-	-	-
SORL1	0	genome.wustl.edu	37	11	121466411	121466411	+	Silent	SNP	G	G	T			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	11	121466411	121466411	G	T	SNP	SORL1	ENST00000260197	human	ensembl	69_37n	+1	known	silent	c.4449	p.T1483	0.996	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	64	0	0.00	31	4	11.43	-	-	-
STARD9	0	genome.wustl.edu	37	15	42986022	42986023	+	In_Frame_Ins	INS	-	-	CAG			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	15	42986022	42986023	-	CAG	INS	STARD9	ENST00000290607	human	ensembl	69_37n	+1	known	in_frame_ins	c.12246_12247	p.4083in_frame_insQ	0.000:0.001	NULL	pfam_Kinesin_motor_dom,pfam_START_lipid-bd,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	18	0	0.00	8	9	52.94	-	-	-
TBX10	0	genome.wustl.edu	37	11	67402624	67402625	+	Frame_Shift_Ins	INS	-	-	CAGG			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	11	67402624	67402625	-	CAGG	INS	TBX10	ENST00000335385	human	ensembl	69_37n	-1	known	frame_shift_ins	c.118_117	p.C39fs	0.101:0.090	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX10	HGNC	ENSG00000167800	26	0	0.00	47	38	44.71	-	-	-
TNRC6C	0	genome.wustl.edu	37	17	76079237	76079237	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	17	76079237	76079237	A	-	DEL	TNRC6C	ENST00000335749	human	ensembl	69_37n	+1	known	frame_shift_del	c.3458	p.Q1153fs	1.000	NULL	pfam_Argonaute_hook_dom,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687	49	0	0.00	23	66	73.33	-	-	-
ZNF791	0	genome.wustl.edu	37	19	12739046	12739046	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FN-01A-11W-A050-09	TCGA-AN-A0FN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8f583981-b257-43ee-9c9e-71a192a49d38	cab9af86-5f00-4d36-8d62-424add7d7492	19	12739046	12739046	G	A	SNP	ZNF791	ENST00000343325	human	ensembl	69_37n	+1	known	missense	c.703	p.E235K	0.476	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF791	HGNC	ENSG00000173875	65	0	0.00	33	9	21.43	-	-	-
