Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC6	0	genome.wustl.edu	37	16	16315440	16315440	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	16	16315440	16315440	G	C	SNP	ABCC6	ENST00000575728	human	ensembl	69_37n	-1	putative	missense	c.285	p.N95K	0.005	NULL	NULL	-	no_errors	ABCC6	HGNC	ENSG00000091262	77	0	0.00	11	4	26.67	-	-	-
ACSF2	0	genome.wustl.edu	37	17	48548486	48548487	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	17	48548486	48548487	CT	-	DEL	ACSF2	ENST00000300441	human	ensembl	69_37n	+1	known	frame_shift_del	c.1313_1314	p.T440fs	0.987:0.969	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSF2	HGNC	ENSG00000167107	75	0	0.00	14	2	12.50	-	-	-
ACTL6B	0	genome.wustl.edu	37	7	100246265	100246265	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	7	100246265	100246265	C	-	DEL	ACTL6B	ENST00000160382	human	ensembl	69_37n	-1	known	frame_shift_del	c.583	p.A195fs	1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTL6B	HGNC	ENSG00000077080	98	0	0.00	9	2	18.18	-	-	-
ARHGAP5	0	genome.wustl.edu	37	14	32560757	32560757	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	14	32560757	32560757	T	A	SNP	ARHGAP5	ENST00000345122	human	ensembl	69_37n	+1	known	missense	c.882	p.S294R	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	62	0	0.00	63	21	25.00	-	-	-
BMX	0	genome.wustl.edu	37	X	15568080	15568080	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	X	15568080	15568080	C	T	SNP	BMX	ENST00000342014	human	ensembl	69_37n	+1	known	missense	c.1913	p.S638L	0.055	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_Pleckstrin_homology,pfam_Znf_Btk_motif,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_Znf_Btk_motif,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_cat_dom	-	no_errors	BMX	HGNC	ENSG00000102010	163	0	0.00	29	6	17.14	-	-	-
C20orf26	0	genome.wustl.edu	37	20	20269354	20269354	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	20	20269354	20269354	C	A	SNP	C20orf26	ENST00000245957	human	ensembl	69_37n	+1	known	missense	c.2898	p.N966K	0.030	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	70	0	0.00	37	16	30.19	-	-	-
C4orf21	0	genome.wustl.edu	37	4	113539671	113539671	+	Missense_Mutation	SNP	A	A	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	4	113539671	113539671	A	T	SNP	C4orf21	ENST00000505019	human	ensembl	69_37n	-1	known	missense	c.1527	p.D509E	0.000	NULL	pfam_DUF2439,pfam_Znf_GRF	-	no_errors	C4orf21	HGNC	ENSG00000138658	101	0	0.00	89	54	37.76	-	-	-
CACNA1E	0	genome.wustl.edu	37	1	181688931	181688931	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	1	181688931	181688931	A	C	SNP	CACNA1E	ENST00000367573	human	ensembl	69_37n	+1	known	missense	c.1683	p.R561S	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	191	0	0.00	107	13	10.83	-	-	-
CD248	0	genome.wustl.edu	37	11	66082629	66082629	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	11	66082629	66082629	G	A	SNP	CD248	ENST00000311330	human	ensembl	69_37n	-1	known	nonsense	c.1870	p.Q624*	0.405	NULL	pfam_C-type_lectin,pfam_EGF-like_Ca-bd,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_C-type_lectin	-	no_errors	CD248	HGNC	ENSG00000174807	105	0	0.00	10	11	52.38	-	-	-
CD3E	0	genome.wustl.edu	37	11	118185202	118185202	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	11	118185202	118185202	A	G	SNP	CD3E	ENST00000361763	human	ensembl	69_37n	+1	known	missense	c.560	p.D187G	1.000	pfam_Phos_immunorcpt_sig_ITAM,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	-	no_errors	CD3E	HGNC	ENSG00000198851	62	0	0.00	7	11	61.11	-	-	-
CLASP1	0	genome.wustl.edu	37	2	122106150	122106152	+	In_Frame_Del	DEL	CGA	CGA	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	CGA	CGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	2	122106150	122106152	CGA	-	DEL	CLASP1	ENST00000263710	human	ensembl	69_37n	-1	known	in_frame_del	c.4351_4349	p.V1450in_frame_del	1.000:0.564:0.985	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	111	0	0.00	16	2	11.11	-	-	-
CNBD1	0	genome.wustl.edu	37	8	88249321	88249321	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	8	88249321	88249321	T	A	SNP	CNBD1	ENST00000518476	human	ensembl	69_37n	+1	known	missense	c.752	p.L251Q	0.000	superfamily_cNMP-bd-like	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNBD1	HGNC	ENSG00000176571	88	0	0.00	46	74	61.16	-	-	-
CNNM2	0	genome.wustl.edu	37	10	104816543	104816543	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	10	104816543	104816543	T	C	SNP	CNNM2	ENST00000457502	human	ensembl	69_37n	+1	known	missense	c.1898	p.I633T	1.000	NULL	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	72	0	0.00	29	27	48.21	-	-	-
COG5	0	genome.wustl.edu	37	7	106877126	106877126	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	7	106877126	106877126	T	A	SNP	COG5	ENST00000297135	human	ensembl	69_37n	-1	known	missense	c.1953	p.L651F	0.001	NULL	pfam_COG_su5,pfam_Vps51	-	no_errors	COG5	HGNC	ENSG00000164597	89	0	0.00	48	12	20.00	-	-	-
CSNK1E	0	genome.wustl.edu	37	22	38694855	38694855	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	22	38694855	38694855	C	T	SNP	CSNK1E	ENST00000359867	human	ensembl	69_37n	-1	known	missense	c.821	p.R274H	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CSNK1E	HGNC	ENSG00000213923	124	1	0.79	17	10	37.04	-	-	-
DNAH17	0	genome.wustl.edu	37	17	76490785	76490785	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	17	76490785	76490785	A	C	SNP	DNAH17	ENST00000389840	human	ensembl	69_37n	-1	known	missense	c.6118	p.F2040V	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	60	0	0.00	2	4	66.67	-	-	-
EIF4ENIF1	0	genome.wustl.edu	37	22	31867874	31867874	+	Silent	SNP	G	G	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	22	31867874	31867874	G	C	SNP	EIF4ENIF1	ENST00000330125	human	ensembl	69_37n	-1	known	silent	c.126	p.P42	0.985	pfam_eIF4E_transporter	pfam_eIF4E_transporter	-	no_errors	EIF4ENIF1	HGNC	ENSG00000184708	134	0	0.00	189	62	24.70	-	-	-
FABP6	0	genome.wustl.edu	37	5	159656619	159656619	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	5	159656619	159656619	A	C	SNP	FABP6	ENST00000393980	human	ensembl	69_37n	+1	known	missense	c.202	p.M68L	0.999	superfamily_Calycin-like,prints_Fatty_acid-bd	superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP6	HGNC	ENSG00000170231	106	0	0.00	40	9	18.37	-	-	-
HIRA	0	genome.wustl.edu	37	22	19349295	19349295	+	Silent	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	22	19349295	19349295	C	T	SNP	HIRA	ENST00000263208	human	ensembl	69_37n	-1	known	silent	c.1935	p.R645	0.951	NULL	pfam_Hira,pfam_WD40_repeat,pfam_HIRA_B_motif,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	HIRA	HGNC	ENSG00000100084	170	0	0.00	29	13	30.95	-	-	-
HLTF	0	genome.wustl.edu	37	3	148793804	148793806	+	In_Frame_Del	DEL	GTT	GTT	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	3	148793804	148793806	GTT	-	DEL	HLTF	ENST00000310053	human	ensembl	69_37n	-1	known	in_frame_del	c.259_257	p.Q86in_frame_del	1.000:1.000:1.000	pfam_HIP116_Rad5p_N,smart_HIP116_Rad5p_N	pfam_SNF2_N,pfam_HIP116_Rad5p_N,pfam_Helicase_C,smart_HIP116_Rad5p_N,smart_Helicase_ATP-bd,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HLTF	HGNC	ENSG00000071794	108	0	0.00	255	108	29.43	-	-	-
IGSF5	0	genome.wustl.edu	37	21	41137704	41137704	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	21	41137704	41137704	C	-	DEL	IGSF5	ENST00000380588	human	ensembl	69_37n	+1	novel	frame_shift_del	c.343	p.S116fs	0.002	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	IGSF5	HGNC	ENSG00000183067	114	0	0.00	15	2	11.76	-	-	-
MORC2	0	genome.wustl.edu	37	22	31336819	31336819	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	22	31336819	31336819	T	C	SNP	MORC2	ENST00000397641	human	ensembl	69_37n	-1	known	missense	c.830	p.Y277C	1.000	superfamily_ATPase-like_ATP-bd	pfam_Znf_CW,pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,superfamily_Carb-bd_dom,pfscan_Znf_CW	-	no_errors	MORC2	HGNC	ENSG00000133422	89	0	0.00	33	8	19.51	-	-	-
MTR	0	genome.wustl.edu	37	1	237023140	237023140	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	1	237023140	237023140	G	C	SNP	MTR	ENST00000366577	human	ensembl	69_37n	+1	known	missense	c.1961	p.G654A	0.831	pirsf_MetH,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	111	0	0.00	95	29	23.39	-	-	-
MUC17	0	genome.wustl.edu	37	7	100686212	100686212	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	7	100686212	100686212	C	T	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	missense	c.11515	p.P3839S	0.029	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	94	0	0.00	45	17	27.42	-	-	-
PALM2	0	genome.wustl.edu	37	9	112705127	112705127	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	9	112705127	112705127	G	A	SNP	PALM2	ENST00000448454	human	ensembl	69_37n	+1	known	missense	c.664	p.V222I	0.289	pfam_Paralemmin	pfam_Paralemmin	-	no_errors	PALM2	HGNC	ENSG00000243444	78	0	0.00	54	19	26.03	-	-	-
PATE4	0	genome.wustl.edu	37	11	125708299	125708299	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	11	125708299	125708299	A	G	SNP	PATE4	ENST00000457514	human	ensembl	69_37n	+1	known	missense	c.274	p.R92G	0.040	NULL	NULL	-	no_errors	PATE4	HGNC	ENSG00000237353	113	0	0.00	27	22	44.90	-	-	-
PCDHA10	0	genome.wustl.edu	37	5	140235801	140235801	+	Silent	SNP	G	G	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	5	140235801	140235801	G	A	SNP	PCDHA10	ENST00000307360	human	ensembl	69_37n	+1	known	silent	c.168	p.A56	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120	79	0	0.00	7	10	58.82	-	-	-
PMEL	0	genome.wustl.edu	37	12	56349080	56349080	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	12	56349080	56349080	C	-	DEL	PMEL	ENST00000360714	human	ensembl	69_37n	-1	known	frame_shift_del	c.1849	p.V617fs	0.972	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	PMEL	HGNC	ENSG00000185664	95	0	0.00	15	2	11.76	-	-	-
POLQ	0	genome.wustl.edu	37	3	121158894	121158894	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	3	121158894	121158894	C	A	SNP	POLQ	ENST00000264233	human	ensembl	69_37n	-1	known	missense	c.7334	p.G2445V	1.000	pfam_DNA-dir_DNA_pol_A_palm_dom,smart_DNA-dir_DNA_pol_A_palm_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	216	0	0.00	193	82	29.71	-	-	-
ROBO2	0	genome.wustl.edu	37	3	77612343	77612343	+	Silent	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	3	77612343	77612343	C	T	SNP	ROBO2	ENST00000461745	human	ensembl	69_37n	+1	known	silent	c.1545	p.N515	1.000	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO2	HGNC	ENSG00000185008	72	0	0.00	45	25	35.71	-	-	-
SAGE1	0	genome.wustl.edu	37	X	134986704	134986704	+	Silent	SNP	T	T	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	X	134986704	134986704	T	C	SNP	SAGE1	ENST00000324447	human	ensembl	69_37n	+1	known	silent	c.289	p.L97	0.023	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433	121	0	0.00	45	20	30.77	-	-	-
SLC25A13	0	genome.wustl.edu	37	7	95751180	95751180	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	7	95751180	95751180	C	-	DEL	SLC25A13	ENST00000416240	human	ensembl	69_37n	-1	known	frame_shift_del	c.1724	p.G575fs	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,prints_Mit_carrier,pfscan_EF_HAND_2,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A13	HGNC	ENSG00000004864	122	0	0.00	93	32	25.40	-	-	-
SPICE1	0	genome.wustl.edu	37	3	113166914	113166914	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	3	113166914	113166914	G	T	SNP	SPICE1	ENST00000467618	human	ensembl	69_37n	-1	putative	missense	c.398	p.S133Y	0.995	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SPICE1	HGNC	ENSG00000163611	271	0	0.00	204	47	18.73	-	-	-
TACC2	0	genome.wustl.edu	37	10	123988915	123988915	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	10	123988915	123988915	C	T	SNP	TACC2	ENST00000334433	human	ensembl	69_37n	+1	known	missense	c.7951	p.H2651Y	0.852	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162	146	0	0.00	23	19	45.24	-	-	-
TEX14	0	genome.wustl.edu	37	17	56679891	56679891	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	17	56679891	56679891	T	A	SNP	TEX14	ENST00000240361	human	ensembl	69_37n	-1	known	missense	c.1415	p.N472I	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TEX14	HGNC	ENSG00000121101	95	0	0.00	44	30	40.54	-	-	-
THOC3	0	genome.wustl.edu	37	5	175388335	175388335	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	5	175388335	175388335	T	C	SNP	THOC3	ENST00000505969	human	ensembl	69_37n	-1	putative	missense	c.82	p.R28G	0.366	pfam_WD40_repeat,superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	THOC3	HGNC	ENSG00000051596	8	0	0.00	0	3	100.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7578263	7578263	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	17	7578263	7578263	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.586	p.R196*	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	142	0	0.00	37	28	43.08	-	-	-
TSC22D3	0	genome.wustl.edu	37	X	106959960	106959960	+	Silent	SNP	G	G	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	X	106959960	106959960	G	A	SNP	TSC22D3	ENST00000372397	human	ensembl	69_37n	-1	known	silent	c.82	p.L28	0.999	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D3	HGNC	ENSG00000157514	108	0	0.00	31	19	38.00	-	-	-
TTC4	0	genome.wustl.edu	37	1	55188450	55188450	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	1	55188450	55188450	G	C	SNP	TTC4	ENST00000371281	human	ensembl	69_37n	+1	known	missense	c.572	p.R191T	1.000	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC4	HGNC	ENSG00000243725	94	0	0.00	52	8	13.33	-	-	-
UNC5D	0	genome.wustl.edu	37	8	35608151	35608151	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	8	35608151	35608151	C	A	SNP	UNC5D	ENST00000404895	human	ensembl	69_37n	+1	known	missense	c.1987	p.P663T	1.000	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death,pfam_Immunoglobulin,superfamily_DEATH-like,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like	-	no_errors	UNC5D	HGNC	ENSG00000156687	168	0	0.00	49	31	38.75	-	-	-
UTRN	0	genome.wustl.edu	37	6	144768443	144768443	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	6	144768443	144768443	C	T	SNP	UTRN	ENST00000367545	human	ensembl	69_37n	+1	known	nonsense	c.1711	p.R571*	0.999	smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	207	0	0.00	78	71	47.65	-	-	-
VPS11	0	genome.wustl.edu	37	11	118948934	118948934	+	RNA	DEL	A	A	-			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	11	118948934	118948934	A	-	DEL	VPS11	ENST00000300793	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	VPS11	HGNC	ENSG00000160695	111	0	0.00	12	2	14.29	-	-	-
ZNF781	0	genome.wustl.edu	37	19	38160608	38160608	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B6-A0RU-01A-11D-A099-09	TCGA-B6-A0RU-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	251371ac-ef46-4e11-b45e-a2aaa986a2d2	5a22cccd-1c8a-425c-bc7c-3043bf4d8d15	19	38160608	38160608	G	A	SNP	ZNF781	ENST00000358582	human	ensembl	69_37n	-1	known	nonsense	c.442	p.Q148*	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF781	HGNC	ENSG00000196381	124	0	0.00	166	68	28.94	-	-	-
