Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA1	0	genome.wustl.edu	37	9	107584791	107584791	+	Silent	SNP	C	C	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	9	107584791	107584791	C	A	SNP	ABCA1	ENST00000374736	human	ensembl	69_37n	-1	known	silent	c.2814	p.G938	0.990	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029	56	0	0.00	47	32	40.51	-	-	-
ACAN	0	genome.wustl.edu	37	15	89400043	89400043	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	15	89400043	89400043	G	C	SNP	ACAN	ENST00000439576	human	ensembl	69_37n	+1	known	missense	c.4227	p.E1409D	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EGF-like_dom,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EGF-like,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	21	0	0.00	13	6	31.58	-	-	-
ADNP2	0	genome.wustl.edu	37	18	77894253	77894253	+	Silent	SNP	C	C	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	18	77894253	77894253	C	A	SNP	ADNP2	ENST00000262198	human	ensembl	69_37n	+1	known	silent	c.957	p.L319	0.001	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544	62	0	0.00	58	32	35.56	-	-	-
ALMS1P	0	genome.wustl.edu	37	2	73912256	73912256	+	RNA	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	2	73912256	73912256	G	A	SNP	ALMS1P	ENST00000450720	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ALMS1P	HGNC	ENSG00000163016	33	0	0.00	32	6	15.79	-	-	-
BTNL8	0	genome.wustl.edu	37	5	180374624	180374624	+	Splice_Site	SNP	G	G	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	5	180374624	180374624	G	T	SNP	BTNL8	ENST00000503543	human	ensembl	69_37n	+1	known	splice_site	c.122-1	e2-1	0.000	-	-	-	no_errors	BTNL8	HGNC	ENSG00000113303	21	0	0.00	32	12	27.27	-	-	-
CDH1	0	genome.wustl.edu	37	16	68772218	68772218	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	16	68772218	68772218	C	T	SNP	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	nonsense	c.67	p.Q23*	0.982	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	96	0	0.00	43	46	51.69	-	-	-
CDKAL1	0	genome.wustl.edu	37	6	21065365	21065365	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	6	21065365	21065365	T	C	SNP	CDKAL1	ENST00000274695	human	ensembl	69_37n	+1	known	missense	c.1142	p.V381A	1.000	pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_MiaB-like_B,tigrfam_Methylthiotransferase	pfam_Methylthiotransferase_N,pfam_rSAM,pfam_TRAM_dom,smart_Elp3/MiaB/NifB,pfscan_TRAM_dom,tigrfam_MiaB-like_B,tigrfam_Methylthiotransferase	-	no_errors	CDKAL1	HGNC	ENSG00000145996	49	0	0.00	55	17	23.61	-	-	-
CLASP2	0	genome.wustl.edu	37	3	33552254	33552254	+	Silent	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	3	33552254	33552254	C	T	SNP	CLASP2	ENST00000399362	human	ensembl	69_37n	-1	known	silent	c.4134	p.V1378	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539	31	0	0.00	27	18	40.00	-	-	-
GATA3	0	genome.wustl.edu	37	10	8111500	8111500	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	10	8111500	8111500	G	A	SNP	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	missense	c.989	p.R330K	1.000	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	84	0	0.00	76	29	27.62	-	-	-
GPR101	0	genome.wustl.edu	37	X	136113330	136113330	+	Silent	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	X	136113330	136113330	G	A	SNP	GPR101	ENST00000298110	human	ensembl	69_37n	-1	known	silent	c.504	p.Y168	0.882	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR101	HGNC	ENSG00000165370	39	0	0.00	39	23	37.10	-	-	-
GPR139	0	genome.wustl.edu	37	16	20043437	20043437	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	16	20043437	20043437	C	T	SNP	GPR139	ENST00000570682	human	ensembl	69_37n	-1	known	missense	c.682	p.A228T	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR139	HGNC	ENSG00000180269	32	0	0.00	57	21	26.92	-	-	-
GPR161	0	genome.wustl.edu	37	1	168056825	168056825	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	1	168056825	168056825	T	C	SNP	GPR161	ENST00000537209	human	ensembl	69_37n	-1	known	missense	c.1382	p.K461R	1.000	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR161	HGNC	ENSG00000143147	49	0	0.00	129	28	17.83	-	-	-
HOXB2	0	genome.wustl.edu	37	17	46622246	46622247	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	17	46622246	46622247	-	A	INS	HOXB2	ENST00000330070	human	ensembl	69_37n	-1	known	frame_shift_ins	c.28_27	p.G9fs	1.000:1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	-	no_errors	HOXB2	HGNC	ENSG00000173917	59	0	0.00	62	29	31.87	-	-	-
KCNG2	0	genome.wustl.edu	37	18	77624283	77624283	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	18	77624283	77624283	G	A	SNP	KCNG2	ENST00000316249	human	ensembl	69_37n	+1	known	missense	c.616	p.E206K	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNG2	HGNC	ENSG00000178342	11	0	0.00	9	6	40.00	-	-	-
KRT14	0	genome.wustl.edu	37	17	39740115	39740115	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	17	39740115	39740115	G	A	SNP	KRT14	ENST00000167586	human	ensembl	69_37n	-1	known	missense	c.824	p.A275V	0.979	pfam_F,superfamily_Prefoldin,prints_Keratin_I	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT14	HGNC	ENSG00000186847	64	0	0.00	64	24	27.27	-	-	-
LAMB3	0	genome.wustl.edu	37	1	209800885	209800885	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	1	209800885	209800885	G	A	SNP	LAMB3	ENST00000356082	human	ensembl	69_37n	-1	known	missense	c.1328	p.P443L	0.991	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878	57	0	0.00	60	43	41.75	-	-	-
LIN9	0	genome.wustl.edu	37	1	226475491	226475491	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	1	226475491	226475491	G	C	SNP	LIN9	ENST00000328205	human	ensembl	69_37n	-1	known	missense	c.320	p.T107R	1.000	NULL	pfam_DIRP	-	no_errors	LIN9	HGNC	ENSG00000183814	30	0	0.00	31	31	50.00	-	-	-
LIX1	0	genome.wustl.edu	37	5	96460224	96460224	+	Silent	SNP	A	A	G			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	5	96460224	96460224	A	G	SNP	LIX1	ENST00000274382	human	ensembl	69_37n	-1	known	silent	c.192	p.P64	0.498	NULL	NULL	-	no_errors	LIX1	HGNC	ENSG00000145721	36	0	0.00	31	21	40.38	-	-	-
LOXHD1	0	genome.wustl.edu	37	18	44146271	44146271	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	18	44146271	44146271	C	T	SNP	LOXHD1	ENST00000536736	human	ensembl	69_37n	-1	known	missense	c.2386	p.G796R	1.000	superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2	-	no_errors	LOXHD1	HGNC	ENSG00000167210	45	0	0.00	31	6	16.22	-	-	-
MUC17	0	genome.wustl.edu	37	7	100677258	100677258	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	7	100677258	100677258	G	A	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	missense	c.2561	p.S854N	0.000	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	54	0	0.00	88	38	30.16	-	-	-
NID1	0	genome.wustl.edu	37	1	236157061	236157061	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	1	236157061	236157061	G	T	SNP	NID1	ENST00000264187	human	ensembl	69_37n	-1	known	missense	c.2639	p.A880E	0.277	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd,superfamily_Green_fluorescent_prot-like,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd,smart_EGF-like,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962	49	0	0.00	85	91	51.70	-	-	-
OR5L2	0	genome.wustl.edu	37	11	55595104	55595104	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	11	55595104	55595104	C	A	SNP	OR5L2	ENST00000378397	human	ensembl	69_37n	+1	known	missense	c.410	p.S137Y	0.991	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030	70	0	0.00	63	34	35.05	-	-	-
PIH1D1	0	genome.wustl.edu	37	19	49952762	49952762	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	19	49952762	49952762	G	C	SNP	PIH1D1	ENST00000262265	human	ensembl	69_37n	-1	known	missense	c.307	p.L103V	1.000	NULL	NULL	-	no_errors	PIH1D1	HGNC	ENSG00000104872	57	0	0.00	28	20	41.67	-	-	-
PMAIP1	0	genome.wustl.edu	37	18	57567684	57567684	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	18	57567684	57567684	C	T	SNP	PMAIP1	ENST00000269518	human	ensembl	69_37n	+1	novel	missense	c.83	p.A28V	0.003	NULL	NULL	-	no_errors	PMAIP1	HGNC	ENSG00000141682	47	0	0.00	31	21	39.62	-	-	-
R3HDM2	0	genome.wustl.edu	37	12	57660607	57660607	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	12	57660607	57660607	C	A	SNP	R3HDM2	ENST00000347140	human	ensembl	69_37n	-1	known	missense	c.1996	p.V666L	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM2	HGNC	ENSG00000179912	29	0	0.00	28	12	30.00	-	-	-
RGS7	0	genome.wustl.edu	37	1	240975339	240975339	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	1	240975339	240975339	C	A	SNP	RGS7	ENST00000407727	human	ensembl	69_37n	-1	known	nonsense	c.961	p.E321*	1.000	NULL	pfam_Regulat_G_prot_signal,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal,prints_Regulat_G_prot_signal	-	no_errors	RGS7	HGNC	ENSG00000182901	32	0	0.00	55	15	21.43	-	-	-
SACS	0	genome.wustl.edu	37	13	23915403	23915403	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	13	23915403	23915403	G	A	SNP	SACS	ENST00000382292	human	ensembl	69_37n	-1	known	missense	c.2612	p.P871L	1.000	NULL	pfam_HEPN,pfam_Ubiquitin,superfamily_ATPase-like_ATP-bd,superfamily_DnaJ_N,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_N,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	50	0	0.00	56	29	34.12	-	-	-
SIM2	0	genome.wustl.edu	37	21	38103360	38103360	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	21	38103360	38103360	C	T	SNP	SIM2	ENST00000290399	human	ensembl	69_37n	+1	known	missense	c.758	p.T253M	1.000	pfam_PAS_fold_3,smart_PAS,pfscan_PAS	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_PAS,smart_PAC,pfscan_PAS,pfscan_HLH_DNA-bd	-	no_errors	SIM2	HGNC	ENSG00000159263	61	0	0.00	81	9	10.00	-	-	-
SLC8A1	0	genome.wustl.edu	37	2	40657293	40657293	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	2	40657293	40657293	C	T	SNP	SLC8A1	ENST00000332839	human	ensembl	69_37n	-1	known	missense	c.128	p.G43E	0.992	tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,pfscan_DnaJ_N,prints_Na_Ca_Ex,prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A1	HGNC	ENSG00000183023	18	0	0.00	25	9	26.47	-	-	-
SLITRK4	0	genome.wustl.edu	37	X	142717848	142717848	+	Silent	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	X	142717848	142717848	C	T	SNP	SLITRK4	ENST00000338017	human	ensembl	69_37n	-1	known	silent	c.1077	p.V359	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK4	HGNC	ENSG00000179542	51	0	0.00	66	10	12.99	-	-	-
SORBS2	0	genome.wustl.edu	37	4	186544315	186544315	+	Silent	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	4	186544315	186544315	C	T	SNP	SORBS2	ENST00000284776	human	ensembl	69_37n	-1	known	silent	c.2256	p.P752	0.066	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	16	0	0.00	16	16	50.00	-	-	-
SPTA1	0	genome.wustl.edu	37	1	158585119	158585119	+	Silent	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	1	158585119	158585119	G	A	SNP	SPTA1	ENST00000368148	human	ensembl	69_37n	-1	known	silent	c.6675	p.D2225	0.988	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	72	0	0.00	164	29	15.03	-	-	-
TBC1D9B	0	genome.wustl.edu	37	5	179302039	179302039	+	Silent	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	5	179302039	179302039	G	A	SNP	TBC1D9B	ENST00000356834	human	ensembl	69_37n	-1	known	silent	c.2049	p.S683	0.989	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_HAND_2,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9B	HGNC	ENSG00000197226	20	0	0.00	24	10	29.41	-	-	-
TEX15	0	genome.wustl.edu	37	8	30703515	30703516	+	Frame_Shift_Ins	INS	-	-	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	8	30703515	30703516	-	T	INS	TEX15	ENST00000256246	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3019_3018	p.A1006fs	1.000:1.000	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863	62	0	0.00	38	22	36.67	-	-	-
TRIM13	0	genome.wustl.edu	37	13	50586375	50586375	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	13	50586375	50586375	A	G	SNP	TRIM13	ENST00000298772	human	ensembl	69_37n	+1	known	missense	c.308	p.Q103R	1.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM13	HGNC	ENSG00000204977	34	0	0.00	44	15	25.42	-	-	-
TTC3	0	genome.wustl.edu	37	21	38569977	38569977	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	21	38569977	38569977	G	A	SNP	TTC3	ENST00000354749	human	ensembl	69_37n	+1	known	missense	c.5686	p.D1896N	0.742	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670	17	0	0.00	27	10	27.03	-	-	-
TUBB4A	0	genome.wustl.edu	37	19	6501314	6501314	+	Silent	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	19	6501314	6501314	C	T	SNP	TUBB4A	ENST00000264071	human	ensembl	69_37n	-1	known	silent	c.261	p.P87	0.006	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Epsilon_tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Alpha_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin	-	no_errors	TUBB4A	HGNC	ENSG00000104833	39	0	0.00	42	24	36.36	-	-	-
TYRP1	0	genome.wustl.edu	37	9	12702411	12702414	+	Frame_Shift_Del	DEL	ACAA	ACAA	-			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	9	12702411	12702414	ACAA	-	DEL	TYRP1	ENST00000388918	human	ensembl	69_37n	+1	known	frame_shift_del	c.1054_1057	p.N353fs	1.000:1.000:0.997:0.999	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYRP1	HGNC	ENSG00000107165	46	0	0.00	48	11	18.64	-	-	-
WDFY3	0	genome.wustl.edu	37	4	85645723	85645723	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	4	85645723	85645723	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	69_37n	-1	known	missense	c.7297	p.V2433I	0.000	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	29	0	0.00	17	7	29.17	-	-	-
WDR66	0	genome.wustl.edu	37	12	122359392	122359392	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	12	122359392	122359392	G	A	SNP	WDR66	ENST00000288912	human	ensembl	69_37n	+1	known	missense	c.181	p.E61K	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023	17	0	0.00	17	4	19.05	-	-	-
ZC2HC1A	0	genome.wustl.edu	37	8	79609657	79609657	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A40C-01A-11D-A23C-09	TCGA-B6-A40C-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	837881ec-621e-4a49-972f-4a161a24ba24	9da5cb06-5902-4204-b1c3-2c1ba5e85564	8	79609657	79609657	C	A	SNP	ZC2HC1A	ENST00000263849	human	ensembl	69_37n	+1	known	missense	c.520	p.L174I	0.994	NULL	NULL	-	no_errors	ZC2HC1A	HGNC	ENSG00000104427	27	0	0.00	54	16	22.86	-	-	-
