Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA12	0	genome.wustl.edu	37	2	215813332	215813332	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	2	215813332	215813332	C	G	SNP	ABCA12	ENST00000272895	human	ensembl	69_37n	-1	known	missense	c.7092	p.K2364N	0.823	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	233	0	0.00	108	25	18.80	-	-	-
ABCA7	0	genome.wustl.edu	37	19	1043354	1043356	+	In_Frame_Del	DEL	TTG	TTG	-			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	19	1043354	1043356	TTG	-	DEL	ABCA7	ENST00000263094	human	ensembl	69_37n	+1	known	in_frame_del	c.812_814	p.IG271in_frame_delR	0.338:0.041:0.030	NULL	pfam_ABC_transporter-like,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687	30	0	0.00	15	22	59.46	-	-	-
ARHGEF17	0	genome.wustl.edu	37	11	73064010	73064010	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	11	73064010	73064010	C	T	SNP	ARHGEF17	ENST00000263674	human	ensembl	69_37n	+1	known	nonsense	c.3406	p.Q1136*	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,superfamily_Vinculin/catenin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF17	HGNC	ENSG00000110237	43	0	0.00	21	5	19.23	-	-	-
ART5	0	genome.wustl.edu	37	11	3661041	3661043	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	11	3661041	3661043	AAA	-	DEL	ART5	ENST00000359918	human	ensembl	69_37n	-1	known	in_frame_del	c.618_616	p.F206in_frame_del	1.000:1.000:1.000	pfam_ART,prints_ART	pfam_ART,prints_ART	-	no_errors	ART5	HGNC	ENSG00000167311	161	0	0.00	81	42	34.15	-	-	-
B4GALNT2	0	genome.wustl.edu	37	17	47236488	47236488	+	Silent	SNP	C	C	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	17	47236488	47236488	C	A	SNP	B4GALNT2	ENST00000300404	human	ensembl	69_37n	+1	known	silent	c.768	p.I256	0.917	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT2	HGNC	ENSG00000167080	492	1	0.20	431	89	17.08	-	-	-
BAG6	0	genome.wustl.edu	37	6	31609988	31609989	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	6	31609988	31609989	-	A	INS	BAG6	ENST00000404765	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2236_2235	p.L745fs	0.929:0.933	NULL	pfam_DUF3538,pfam_Ubiquitin,smart_Ubiquitin,pfscan_Ubiquitin_supergroup	-	no_errors	BAG6	HGNC	ENSG00000204463	128	0	0.00	98	28	22.22	-	-	-
BCAR1	0	genome.wustl.edu	37	16	75263772	75263773	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	16	75263772	75263773	-	T	INS	BCAR1	ENST00000418647	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2388_2387	p.C797fs	1.000:1.000	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820	27	0	0.00	4	2	33.33	-	-	-
BCAR1	0	genome.wustl.edu	37	16	75263776	75263776	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	16	75263776	75263776	T	-	DEL	BCAR1	ENST00000418647	human	ensembl	69_37n	-1	known	frame_shift_del	c.2384	p.E795fs	1.000	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820	26	0	0.00	4	2	33.33	-	-	-
C6orf10	0	genome.wustl.edu	37	6	32298378	32298378	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	6	32298378	32298378	G	T	SNP	C6orf10	ENST00000447241	human	ensembl	69_37n	-1	known	missense	c.502	p.P168T	0.979	NULL	NULL	-	no_errors	C6orf10	HGNC	ENSG00000204296	94	0	0.00	61	12	16.44	-	-	-
CPT1B	0	genome.wustl.edu	37	22	51014673	51014674	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	22	51014673	51014674	-	T	INS	CPT1B	ENST00000312108	human	ensembl	69_37n	-1	known	frame_shift_ins	c.653_652	p.R218fs	0.989:0.743	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	46	0	0.00	7	7	50.00	-	-	-
CPT1B	0	genome.wustl.edu	37	22	51014680	51014681	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	22	51014680	51014681	-	T	INS	CPT1B	ENST00000312108	human	ensembl	69_37n	-1	known	frame_shift_ins	c.646_645	p.A215fs	1.000:0.970	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	47	0	0.00	8	7	46.67	-	-	-
DENND3	0	genome.wustl.edu	37	8	142161880	142161880	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	8	142161880	142161880	G	A	SNP	DENND3	ENST00000262585	human	ensembl	69_37n	+1	known	missense	c.778	p.A260T	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_WD40_repeat,pfam_uDENN_dom,superfamily_WD40_repeat_dom,smart_DENN_dom,smart_dDENN_dom,smart_WD40_repeat,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_WD40_repeat_dom	-	no_errors	DENND3	HGNC	ENSG00000105339	198	0	0.00	214	60	21.74	-	-	-
FBN3	0	genome.wustl.edu	37	19	8188382	8188383	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	19	8188382	8188383	-	C	INS	FBN3	ENST00000270509	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3048_3047	p.F1017fs	1.000:1.000	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pirsf_Fibrillin,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_TB_dom,pfam_EGF-like_dom,superfamily_TB_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pirsf_Fibrillin,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	42	0	0.00	16	3	15.79	-	-	-
FIP1L1	0	genome.wustl.edu	37	4	54319224	54319224	+	Silent	SNP	C	C	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	4	54319224	54319224	C	A	SNP	FIP1L1	ENST00000337488	human	ensembl	69_37n	+1	known	silent	c.1423	p.R475	0.990	NULL	pfam_Fip1	-	no_errors	FIP1L1	HGNC	ENSG00000145216	202	0	0.00	99	42	29.79	-	-	-
GABRA1	0	genome.wustl.edu	37	5	161281210	161281210	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	5	161281210	161281210	G	A	SNP	GABRA1	ENST00000023897	human	ensembl	69_37n	+1	known	missense	c.121	p.V41I	1.000	superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	158	0	0.00	123	16	11.51	-	-	-
GPR125	0	genome.wustl.edu	37	4	22390729	22390729	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	4	22390729	22390729	C	A	SNP	GPR125	ENST00000334304	human	ensembl	69_37n	-1	known	missense	c.2705	p.S902I	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_GPCR_2_extracellular_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like	-	no_errors	GPR125	HGNC	ENSG00000152990	829	0	0.00	417	88	17.39	-	-	-
GRIN2B	0	genome.wustl.edu	37	12	13722814	13722814	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	12	13722814	13722814	G	A	SNP	GRIN2B	ENST00000279593	human	ensembl	69_37n	-1	known	missense	c.2309	p.S770F	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000150086	135	0	0.00	124	27	17.76	-	-	-
GUCY1A3	0	genome.wustl.edu	37	4	156618138	156618138	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	4	156618138	156618138	G	T	SNP	GUCY1A3	ENST00000296518	human	ensembl	69_37n	+1	known	missense	c.119	p.C40F	0.000	NULL	pfam_A/G_cyclase,pfam_Haem_no_assoc-bd,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A3	HGNC	ENSG00000164116	167	0	0.00	82	18	18.00	-	-	-
HEATR2	0	genome.wustl.edu	37	7	810169	810169	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	7	810169	810169	C	T	SNP	HEATR2	ENST00000440747	human	ensembl	69_37n	+1	novel	missense	c.1249	p.L417F	0.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	HEATR2	HGNC	ENSG00000164818	25	0	0.00	16	11	40.74	-	-	-
HSPD1	0	genome.wustl.edu	37	2	198352668	198352668	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	2	198352668	198352668	T	G	SNP	HSPD1	ENST00000345042	human	ensembl	69_37n	-1	known	missense	c.1483	p.M495L	0.632	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chaprnin_Cpn60	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaprnin_Cpn60,prints_Chaperone_TCP-1,tigrfam_Chaprnin_Cpn60	-	no_errors	HSPD1	HGNC	ENSG00000144381	57	0	0.00	46	10	17.86	-	-	-
IFNA7	0	genome.wustl.edu	37	9	21201826	21201826	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	9	21201826	21201826	G	T	SNP	IFNA7	ENST00000239347	human	ensembl	69_37n	-1	known	nonsense	c.339	p.Y113*	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA7	HGNC	ENSG00000214042	718	0	0.00	474	75	13.66	-	-	-
ITGA2	0	genome.wustl.edu	37	5	52382807	52382807	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	5	52382807	52382807	C	T	SNP	ITGA2	ENST00000296585	human	ensembl	69_37n	+1	known	missense	c.3284	p.T1095M	0.380	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGA2	HGNC	ENSG00000164171	88	0	0.00	39	8	17.02	-	-	-
ITGB1	0	genome.wustl.edu	37	10	33217124	33217124	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	10	33217124	33217124	T	G	SNP	ITGB1	ENST00000374956	human	ensembl	69_37n	-1	known	missense	c.445	p.M149L	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB1	HGNC	ENSG00000150093	347	0	0.00	137	55	28.65	-	-	-
KCNK13	0	genome.wustl.edu	37	14	90651284	90651285	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	14	90651284	90651285	-	G	INS	KCNK13	ENST00000282146	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1164_1165	p.V390fs	0.587:1.000	NULL	pfam_Ion_trans_2,prints_2pore_dom_K_chnl_THIK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK13	HGNC	ENSG00000152315	57	0	0.00	36	4	10.00	-	-	-
KIAA0907	0	genome.wustl.edu	37	1	155886454	155886454	+	Silent	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	1	155886454	155886454	C	T	SNP	KIAA0907	ENST00000368321	human	ensembl	69_37n	-1	known	silent	c.1515	p.K505	1.000	NULL	NULL	-	no_errors	KIAA0907	HGNC	ENSG00000132680	260	0	0.00	201	82	28.87	-	-	-
LIMK1	0	genome.wustl.edu	37	7	73520549	73520549	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	7	73520549	73520549	G	T	SNP	LIMK1	ENST00000336180	human	ensembl	69_37n	+1	known	missense	c.857	p.S286I	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683	73	0	0.00	48	16	25.00	-	-	-
LIMK1	0	genome.wustl.edu	37	7	73520550	73520550	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	7	73520550	73520550	C	G	SNP	LIMK1	ENST00000336180	human	ensembl	69_37n	+1	known	missense	c.858	p.S286R	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683	74	0	0.00	49	12	19.35	-	-	-
LMNB2	0	genome.wustl.edu	37	19	2431861	2431862	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	19	2431861	2431862	-	G	INS	LMNB2	ENST00000325327	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1630_1629	p.S543fs	0.018:0.000	pfam_Lamin_tail_dom	pfam_F,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNB2	HGNC	ENSG00000176619	25	0	0.00	5	3	37.50	-	-	-
MAP1A	0	genome.wustl.edu	37	15	43818899	43818899	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	15	43818899	43818899	G	A	SNP	MAP1A	ENST00000399453	human	ensembl	69_37n	+1	known	missense	c.5228	p.R1743Q	0.478	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963	156	0	0.00	125	46	26.90	-	-	-
MAPK4	0	genome.wustl.edu	37	18	48190626	48190626	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	18	48190626	48190626	G	A	SNP	MAPK4	ENST00000400384	human	ensembl	69_37n	+1	known	missense	c.298	p.V100M	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK4	HGNC	ENSG00000141639	200	0	0.00	57	68	53.97	-	-	-
NREP	0	genome.wustl.edu	37	5	111066712	111066712	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	5	111066712	111066712	C	T	SNP	NREP	ENST00000395634	human	ensembl	69_37n	-1	known	missense	c.245	p.R82H	1.000	pfam_Neuronal_3.1	pfam_Neuronal_3.1	-	no_errors	NREP	HGNC	ENSG00000134986	227	1	0.44	204	40	16.39	-	-	-
OR4C12	0	genome.wustl.edu	37	11	50003457	50003457	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	11	50003457	50003457	C	T	SNP	OR4C12	ENST00000335238	human	ensembl	69_37n	-1	known	missense	c.581	p.G194D	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4C12	HGNC	ENSG00000221954	625	0	0.00	194	58	23.02	-	-	-
OR5K2	0	genome.wustl.edu	37	3	98216663	98216663	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	3	98216663	98216663	G	A	SNP	OR5K2	ENST00000427338	human	ensembl	69_37n	+1	known	missense	c.139	p.A47T	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5K2	HGNC	ENSG00000231861	476	0	0.00	216	100	31.55	-	-	-
PCDHA5	0	genome.wustl.edu	37	5	140202966	140202966	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	5	140202966	140202966	G	A	SNP	PCDHA5	ENST00000529859	human	ensembl	69_37n	+1	known	missense	c.1606	p.A536T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965	67	0	0.00	41	13	24.07	-	-	-
PCNT	0	genome.wustl.edu	37	21	47754627	47754627	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	21	47754627	47754627	G	A	SNP	PCNT	ENST00000359568	human	ensembl	69_37n	+1	known	missense	c.584	p.R195H	0.008	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	431	1	0.23	221	148	40.11	-	-	-
POLR1A	0	genome.wustl.edu	37	2	86258493	86258493	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	2	86258493	86258493	T	C	SNP	POLR1A	ENST00000263857	human	ensembl	69_37n	-1	known	missense	c.4538	p.D1513G	0.983	pfam_RNA_pol_Rpb1_5	pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_Rpb1_1,smart_RNA_pol_N	-	no_errors	POLR1A	HGNC	ENSG00000068654	281	1	0.35	153	39	20.31	-	-	-
PRKCQ	0	genome.wustl.edu	37	10	6557003	6557004	+	In_Frame_Ins	INS	-	-	TTT			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	10	6557003	6557004	-	TTT	INS	PRKCQ	ENST00000263125	human	ensembl	69_37n	-1	known	in_frame_ins	c.95_94	p.L32in_frame_insQI	0.985:0.997	superfamily_C2_Ca/lipid-bd_dom_CaLB,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	268	0	0.00	107	50	31.85	-	-	-
PRKCQ	0	genome.wustl.edu	37	10	6557004	6557005	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	10	6557004	6557005	-	C	INS	PRKCQ	ENST00000263125	human	ensembl	69_37n	-1	known	frame_shift_ins	c.94_93	p.L31fs	0.997:1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	263	0	0.00	96	50	34.25	-	-	-
PRKCQ	0	genome.wustl.edu	37	10	6557011	6557012	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	10	6557011	6557012	-	G	INS	PRKCQ	ENST00000263125	human	ensembl	69_37n	-1	known	frame_shift_ins	c.87_86	p.A30fs	0.661:1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	258	0	0.00	95	50	34.48	-	-	-
RAB25	0	genome.wustl.edu	37	1	156038083	156038083	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	1	156038083	156038083	G	A	SNP	RAB25	ENST00000361084	human	ensembl	69_37n	+1	known	missense	c.262	p.A88T	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB25	HGNC	ENSG00000132698	213	0	0.00	357	59	14.15	-	-	-
RASGRP1	0	genome.wustl.edu	37	15	38805032	38805032	+	Silent	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	15	38805032	38805032	C	T	SNP	RASGRP1	ENST00000310803	human	ensembl	69_37n	-1	known	silent	c.801	p.T267	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,prints_DAG/PE-bd,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRP1	HGNC	ENSG00000172575	49	0	0.00	46	8	14.81	-	-	-
RBM33	0	genome.wustl.edu	37	7	155493674	155493674	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	7	155493674	155493674	C	G	SNP	RBM33	ENST00000287912	human	ensembl	69_37n	+1	known	missense	c.775	p.L259V	0.001	NULL	NULL	-	no_errors	RBM33	HGNC	ENSG00000184863	48	0	0.00	28	6	17.65	-	-	-
RPH3A	0	genome.wustl.edu	37	12	113314581	113314581	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	12	113314581	113314581	G	T	SNP	RPH3A	ENST00000389385	human	ensembl	69_37n	+1	known	missense	c.1081	p.A361S	0.920	NULL	pfam_C2_Ca-dep,pfam_Rabphilin3A_effector_Zn-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,smart_C2_Ca-dep,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_membr_targeting,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RPH3A	HGNC	ENSG00000089169	50	0	0.00	33	5	13.16	-	-	-
SARDH	0	genome.wustl.edu	37	9	136594964	136594964	+	Silent	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	9	136594964	136594964	G	T	SNP	SARDH	ENST00000371872	human	ensembl	69_37n	-1	known	silent	c.838	p.R280	0.661	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453	89	0	0.00	79	14	15.05	-	-	-
SEC24B	0	genome.wustl.edu	37	4	110442693	110442693	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	4	110442693	110442693	C	G	SNP	SEC24B	ENST00000265175	human	ensembl	69_37n	+1	known	missense	c.2419	p.R807G	1.000	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802	81	0	0.00	54	12	18.18	-	-	-
SERPINB7	0	genome.wustl.edu	37	18	61463607	61463607	+	Silent	SNP	T	T	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	18	61463607	61463607	T	C	SNP	SERPINB7	ENST00000336429	human	ensembl	69_37n	+1	known	silent	c.444	p.N148	0.085	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINB7	HGNC	ENSG00000166396	163	0	0.00	67	9	11.84	-	-	-
SPEG	0	genome.wustl.edu	37	2	220312900	220312901	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	2	220312900	220312901	-	C	INS	SPEG	ENST00000312358	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.1020_1021	p.E340fs	0.813:0.864	NULL	pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	SPEG	HGNC	ENSG00000072195	14	0	0.00	1	2	66.67	-	-	-
STRBP	0	genome.wustl.edu	37	9	125923337	125923337	+	Silent	SNP	C	C	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	9	125923337	125923337	C	T	SNP	STRBP	ENST00000348403	human	ensembl	69_37n	-1	known	silent	c.546	p.S182	1.000	pfam_DZF,smart_DZF	pfam_DZF,pfam_Ds-RNA-bd,smart_DZF,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	-	no_errors	STRBP	HGNC	ENSG00000165209	81	0	0.00	19	14	42.42	-	-	-
TATDN2	0	genome.wustl.edu	37	3	10301826	10301826	+	Silent	SNP	T	T	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	3	10301826	10301826	T	C	SNP	TATDN2	ENST00000287652	human	ensembl	69_37n	+1	known	silent	c.420	p.D140	1.000	NULL	pfam_TatD_superfamily	-	no_errors	TATDN2	HGNC	ENSG00000157014	196	1	0.51	110	87	44.16	-	-	-
TFPI2	0	genome.wustl.edu	37	7	93518420	93518420	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	7	93518420	93518420	C	-	DEL	TFPI2	ENST00000222543	human	ensembl	69_37n	-1	known	frame_shift_del	c.387	p.C130fs	0.000	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI2	HGNC	ENSG00000105825	297	0	0.00	131	28	17.61	-	-	-
TIGD2	0	genome.wustl.edu	37	4	90035623	90035623	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	4	90035623	90035623	C	A	SNP	TIGD2	ENST00000317005	human	ensembl	69_37n	+1	known	missense	c.1498	p.L500M	0.998	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD2	HGNC	ENSG00000180346	216	0	0.00	125	16	11.35	-	-	-
TMEM48	0	genome.wustl.edu	37	1	54293701	54293701	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	1	54293701	54293701	A	C	SNP	TMEM48	ENST00000371429	human	ensembl	69_37n	-1	known	missense	c.426	p.F142L	0.166	pfam_Nucleoporin_prot_Ndc1/Nup	pfam_Nucleoporin_prot_Ndc1/Nup	-	no_errors	TMEM48	HGNC	ENSG00000058804	176	0	0.00	79	20	20.20	-	-	-
TPM1	0	genome.wustl.edu	37	15	63336291	63336291	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	15	63336291	63336291	C	-	DEL	TPM1	ENST00000288398	human	ensembl	69_37n	+1	known	frame_shift_del	c.180	p.S61fs	1.000	pfam_Tropomyosin	pfam_Tropomyosin,prints_Tropomyosin	-	no_errors	TPM1	HGNC	ENSG00000140416	72	0	0.00	23	10	29.41	-	-	-
TRAF6	0	genome.wustl.edu	37	11	36518753	36518753	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	11	36518753	36518753	T	C	SNP	TRAF6	ENST00000348124	human	ensembl	69_37n	-1	known	missense	c.511	p.K171E	0.987	pirsf_TNF_rcpt--assoc_TRAF,pfscan_Znf_TRAF	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF6	HGNC	ENSG00000175104	108	0	0.00	86	34	28.33	-	-	-
TRAPPC12	0	genome.wustl.edu	37	2	3428379	3428379	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	2	3428379	3428379	T	C	SNP	TRAPPC12	ENST00000441983	human	ensembl	69_37n	+1	putative	missense	c.401	p.L134S	0.857	NULL	NULL	-	no_start_codon:pseudogene:bad_bp_length_for_coding_region	TRAPPC12	HGNC	ENSG00000171853	142	0	0.00	127	34	21.12	-	-	-
TRPM6	0	genome.wustl.edu	37	9	77423061	77423061	+	Silent	SNP	G	G	T			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	9	77423061	77423061	G	T	SNP	TRPM6	ENST00000451710	human	ensembl	69_37n	-1	known	silent	c.1527	p.T509	0.013	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	175	0	0.00	54	28	34.15	-	-	-
VAC14	0	genome.wustl.edu	37	16	70834801	70834802	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	16	70834801	70834802	CA	-	DEL	VAC14	ENST00000261776	human	ensembl	69_37n	-1	known	frame_shift_del	c.3_2	p.M1fs	1.000:1.000	superfamily_ARM-type_fold	pfam_DUF3434,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	VAC14	HGNC	ENSG00000103043	18	0	0.00	5	6	50.00	-	-	-
WDR62	0	genome.wustl.edu	37	19	36584983	36584983	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	19	36584983	36584983	G	A	SNP	WDR62	ENST00000401500	human	ensembl	69_37n	+1	known	missense	c.2384	p.G795E	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702	165	0	0.00	97	112	53.59	-	-	-
ZC3H4	0	genome.wustl.edu	37	19	47570533	47570534	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	19	47570533	47570534	-	G	INS	ZC3H4	ENST00000253048	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2992_2991	p.V997fs	0.128:0.006	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H4	HGNC	ENSG00000130749	63	0	0.00	16	2	11.11	-	-	-
ZNF227	0	genome.wustl.edu	37	19	44738970	44738970	+	Silent	SNP	G	G	A			TCGA-BH-A0B1-01A-12W-A071-09	TCGA-BH-A0B1-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de20290a-1560-41fd-896b-a3ae1103423e	eb76d20f-0575-49c2-a173-c370be9eef44	19	44738970	44738970	G	A	SNP	ZNF227	ENST00000313040	human	ensembl	69_37n	+1	known	silent	c.387	p.R129	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF227	HGNC	ENSG00000131115	200	0	0.00	236	39	14.18	-	-	-
