Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB7	0	genome.wustl.edu	37	X	74296459	74296459	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	74296459	74296459	T	C	SNP	ABCB7	ENST00000253577	human	ensembl	69_37n	-1	known	missense	c.487	p.K163E	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB7	HGNC	ENSG00000131269	168	0	0.00	80	42	34.43	-	-	-
ABCC1	0	genome.wustl.edu	37	16	16218677	16218677	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	16218677	16218677	A	G	SNP	ABCC1	ENST00000399408	human	ensembl	69_37n	+1	known	missense	c.3652	p.N1218D	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC1	HGNC	ENSG00000103222	86	0	0.00	118	18	13.14	-	-	-
ACTN3	0	genome.wustl.edu	37	11	66328165	66328165	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	66328165	66328165	C	A	SNP	ACTN3	ENST00000502692	human	ensembl	69_37n	+1	known	missense	c.1928	p.P643H	0.974	NULL	NULL	-	pseudogene	ACTN3	HGNC	ENSG00000248746	71	0	0.00	62	18	22.50	-	-	-
ADAM29	0	genome.wustl.edu	37	4	175897313	175897313	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	175897313	175897313	C	T	SNP	ADAM29	ENST00000359240	human	ensembl	69_37n	+1	known	missense	c.637	p.R213C	0.001	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM29	HGNC	ENSG00000168594	239	0	0.00	137	75	35.38	-	-	-
ADAMTS16	0	genome.wustl.edu	37	5	5242243	5242243	+	Silent	SNP	T	T	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	5242243	5242243	T	A	SNP	ADAMTS16	ENST00000274181	human	ensembl	69_37n	+1	known	silent	c.2601	p.P867	0.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	74	0	0.00	54	43	43.88	-	-	-
ADAMTSL1	0	genome.wustl.edu	37	9	18775842	18775842	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	18775842	18775842	G	A	SNP	ADAMTSL1	ENST00000380548	human	ensembl	69_37n	+1	novel	silent	c.2499	p.P833	0.013	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	141	0	0.00	82	50	36.23	-	-	-
ADC	0	genome.wustl.edu	37	1	33562360	33562360	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	33562360	33562360	G	A	SNP	ADC	ENST00000373441	human	ensembl	69_37n	+1	known	missense	c.806	p.G269D	0.997	pfam_De-COase2_N,superfamily_Ala_racemase/Decarboxylase_C	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	ADC	HGNC	ENSG00000142920	195	0	0.00	199	41	17.08	-	-	-
ADCY5	0	genome.wustl.edu	37	3	123010174	123010174	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	123010174	123010174	C	T	SNP	ADCY5	ENST00000462833	human	ensembl	69_37n	-1	known	missense	c.3113	p.R1038Q	1.000	smart_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY5	HGNC	ENSG00000173175	38	0	0.00	30	15	33.33	-	-	-
ADNP	0	genome.wustl.edu	37	20	49508350	49508350	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	20	49508350	49508350	G	A	SNP	ADNP	ENST00000349014	human	ensembl	69_37n	-1	known	silent	c.2901	p.D967	0.780	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ADNP	HGNC	ENSG00000101126	131	0	0.00	126	26	17.11	-	-	-
ADNP2	0	genome.wustl.edu	37	18	77895840	77895840	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	77895840	77895840	C	T	SNP	ADNP2	ENST00000262198	human	ensembl	69_37n	+1	known	silent	c.2544	p.H848	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544	34	0	0.00	27	11	28.21	-	-	-
ALDH5A1	0	genome.wustl.edu	37	6	24502792	24502792	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	24502792	24502792	A	G	SNP	ALDH5A1	ENST00000348925	human	ensembl	69_37n	+1	known	missense	c.396	p.I132M	0.522	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_Succ_semiAld_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_Succ_semiAld_DH	-	no_errors	ALDH5A1	HGNC	ENSG00000112294	541	0	0.00	511	305	37.33	-	-	-
ANKRD36	0	genome.wustl.edu	37	2	97868069	97868069	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	97868069	97868069	C	T	SNP	ANKRD36	ENST00000420699	human	ensembl	69_37n	+1	known	silent	c.2898	p.D966	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36	HGNC	ENSG00000135976	720	0	0.00	161	49	23.22	-	-	-
ANKS1B	0	genome.wustl.edu	37	12	99640366	99640367	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	99640366	99640367	-	T	INS	ANKS1B	ENST00000329257	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2033_2032	p.S678fs	0.976:0.996	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTyr_interaction_dom,pfam_SAM_2,pfam_PTB,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTyr_interaction_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTyr_interaction_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1B	HGNC	ENSG00000185046	412	0	0.00	322	90	21.84	-	-	-
AP4M1	0	genome.wustl.edu	37	7	99704464	99704464	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	99704464	99704464	C	T	SNP	AP4M1	ENST00000359593	human	ensembl	69_37n	+1	known	nonsense	c.1321	p.R441*	0.996	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP4M1	HGNC	ENSG00000221838	29	0	0.00	33	10	23.26	-	-	-
APC	0	genome.wustl.edu	37	5	112175041	112175041	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	112175041	112175041	A	C	SNP	APC	ENST00000257430	human	ensembl	69_37n	+1	known	missense	c.3750	p.K1250N	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	73	0	0.00	50	36	41.86	-	-	-
ARHGAP22	0	genome.wustl.edu	37	10	49659122	49659122	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	49659122	49659122	C	T	SNP	ARHGAP22	ENST00000417912	human	ensembl	69_37n	-1	known	silent	c.1098	p.T366	0.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP22	HGNC	ENSG00000128805	41	0	0.00	27	22	44.90	-	-	-
ARHGAP29	0	genome.wustl.edu	37	1	94668215	94668216	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	94668215	94668216	TT	-	DEL	ARHGAP29	ENST00000260526	human	ensembl	69_37n	-1	known	frame_shift_del	c.1028_1027	p.K343fs	0.998:0.996	NULL	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	ARHGAP29	HGNC	ENSG00000137962	387	0	0.00	425	73	14.60	-	-	-
ARPC1B	0	genome.wustl.edu	37	7	98991736	98991736	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	98991736	98991736	T	C	SNP	ARPC1B	ENST00000252725	human	ensembl	69_37n	+1	known	silent	c.1074	p.D358	0.671	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_ARPC2/3_su1	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_ARPC2/3_su1,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ARPC1B	HGNC	ENSG00000130429	56	0	0.00	47	19	28.79	-	-	-
ATP12A	0	genome.wustl.edu	37	13	25272825	25272825	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	13	25272825	25272825	C	T	SNP	ATP12A	ENST00000218548	human	ensembl	69_37n	+1	known	silent	c.1560	p.H520	0.000	pfam_Dehalogen-like_hydro,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_cation-ex_asu_euk	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP12A	HGNC	ENSG00000075673	56	0	0.00	56	13	18.84	-	-	-
ATP13A4	0	genome.wustl.edu	37	3	193183869	193183869	+	Splice_Site	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	193183869	193183869	A	G	SNP	ATP13A4	ENST00000392443	human	ensembl	69_37n	-1	novel	splice_site	c.1215+2	e11+2	0.294	-	-	-	no_errors	ATP13A4	HGNC	ENSG00000127249	133	0	0.00	104	66	38.82	-	-	-
ATRNL1	0	genome.wustl.edu	37	10	117221463	117221463	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	117221463	117221463	T	C	SNP	ATRNL1	ENST00000355044	human	ensembl	69_37n	+1	known	missense	c.3335	p.I1112T	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB,superfamily_Plexin-like_fold,smart_EGF-like,smart_CUB,smart_Plexin-like,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	633	0	0.00	312	192	38.10	-	-	-
ATXN2	0	genome.wustl.edu	37	12	111990087	111990087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	111990087	111990087	T	-	DEL	ATXN2	ENST00000377617	human	ensembl	69_37n	-1	known	frame_shift_del	c.1048	p.R350fs	1.000	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2	HGNC	ENSG00000204842	281	0	0.00	314	37	10.51	-	-	-
B4GALNT1	0	genome.wustl.edu	37	12	58025102	58025103	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	58025102	58025103	-	C	INS	B4GALNT1	ENST00000341156	human	ensembl	69_37n	-1	known	frame_shift_ins	c.264_263	p.L89fs	0.004:0.099	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT1	HGNC	ENSG00000135454	58	0	0.00	58	17	22.67	-	-	-
BIRC7	0	genome.wustl.edu	37	20	61869314	61869314	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	20	61869314	61869314	G	A	SNP	BIRC7	ENST00000217169	human	ensembl	69_37n	+1	known	missense	c.409	p.G137R	0.969	pfam_BIR,smart_BIR,pfscan_BIR	pfam_BIR,smart_BIR,smart_Znf_RING,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC7	HGNC	ENSG00000101197	18	0	0.00	22	16	42.11	-	-	-
BMP8B	0	genome.wustl.edu	37	1	40228838	40228838	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	40228838	40228838	A	G	SNP	BMP8B	ENST00000372827	human	ensembl	69_37n	-1	known	missense	c.985	p.Y329H	1.000	pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP8B	HGNC	ENSG00000116985	135	0	0.00	92	61	39.87	-	-	-
BROX	0	genome.wustl.edu	37	1	222897497	222897497	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	222897497	222897497	A	G	SNP	BROX	ENST00000340934	human	ensembl	69_37n	+1	known	silent	c.465	p.K155	1.000	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfscan_BRO1_dom	-	no_errors	BROX	HGNC	ENSG00000162819	245	0	0.00	275	49	15.12	-	-	-
BTN2A1	0	genome.wustl.edu	37	6	26468547	26468547	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	26468547	26468547	G	A	SNP	BTN2A1	ENST00000312541	human	ensembl	69_37n	+1	known	missense	c.1354	p.V452I	0.034	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like	-	no_errors	BTN2A1	HGNC	ENSG00000112763	284	0	0.00	198	127	39.08	-	-	-
C11orf84	0	genome.wustl.edu	37	11	63585474	63585474	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	63585474	63585474	C	T	SNP	C11orf84	ENST00000294244	human	ensembl	69_37n	+1	known	missense	c.325	p.H109Y	0.927	NULL	NULL	-	no_errors	C11orf84	HGNC	ENSG00000168005	65	0	0.00	49	41	45.56	-	-	-
C1QTNF6	0	genome.wustl.edu	37	22	37578518	37578518	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	37578518	37578518	A	G	SNP	C1QTNF6	ENST00000337843	human	ensembl	69_37n	-1	known	missense	c.547	p.F183L	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF6	HGNC	ENSG00000133466	33	0	0.00	11	24	68.57	-	-	-
CACNA1I	0	genome.wustl.edu	37	22	40043828	40043828	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	40043828	40043828	T	C	SNP	CACNA1I	ENST00000336649	human	ensembl	69_37n	+1	known	silent	c.1464	p.H488	0.019	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346	67	0	0.00	31	41	56.94	-	-	-
CAMSAP3	0	genome.wustl.edu	37	19	7676815	7676815	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	7676815	7676815	C	T	SNP	CAMSAP3	ENST00000446248	human	ensembl	69_37n	+1	known	missense	c.1517	p.A506V	0.998	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrell-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826	33	0	0.00	21	16	43.24	-	-	-
CAST	0	genome.wustl.edu	37	5	96101008	96101008	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	96101008	96101008	A	G	SNP	CAST	ENST00000484552	human	ensembl	69_37n	+1	known	missense	c.991	p.T331A	0.993	pfam_Prot_inh_calpain	pfam_Prot_inh_calpain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CAST	HGNC	ENSG00000153113	154	1	0.65	61	26	29.55	-	-	-
CATSPER2	0	genome.wustl.edu	37	15	43927354	43927354	+	Splice_Site	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	43927354	43927354	T	-	DEL	CATSPER2	ENST00000419262	human	ensembl	69_37n	-1	known	splice_site_del	c.34-2	e2-2	0.002	-	-	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CATSPER2	HGNC	ENSG00000166762	46	0	0.00	28	17	35.42	-	-	-
CCDC147	0	genome.wustl.edu	37	10	106118199	106118199	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	106118199	106118199	A	G	SNP	CCDC147	ENST00000369704	human	ensembl	69_37n	+1	known	missense	c.110	p.E37G	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC147	HGNC	ENSG00000120051	151	0	0.00	129	42	24.56	-	-	-
CDH20	0	genome.wustl.edu	37	18	59157855	59157855	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	59157855	59157855	G	T	SNP	CDH20	ENST00000262717	human	ensembl	69_37n	+1	known	missense	c.69	p.W23C	0.994	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542	141	0	0.00	117	37	24.03	-	-	-
CDH24	0	genome.wustl.edu	37	14	23523784	23523785	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	23523784	23523785	-	C	INS	CDH24	ENST00000267383	human	ensembl	69_37n	-1	known	frame_shift_ins	c.715_714	p.L238fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH24	HGNC	ENSG00000139880	74	0	0.00	65	26	28.57	-	-	-
CDKN2D	0	genome.wustl.edu	37	19	10677827	10677827	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	10677827	10677827	G	A	SNP	CDKN2D	ENST00000335766	human	ensembl	69_37n	-1	known	silent	c.408	p.D136	0.621	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2D	HGNC	ENSG00000129355	35	0	0.00	33	20	37.74	-	-	-
CENPE	0	genome.wustl.edu	37	4	104096015	104096015	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	104096015	104096015	T	C	SNP	CENPE	ENST00000265148	human	ensembl	69_37n	-1	known	missense	c.1525	p.N509D	0.811	NULL	pfam_Kinesin_motor_dom,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778	483	0	0.00	459	69	13.07	-	-	-
CFH	0	genome.wustl.edu	37	1	196695952	196695952	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	196695952	196695952	C	T	SNP	CFH	ENST00000367429	human	ensembl	69_37n	+1	known	silent	c.2118	p.S706	0.009	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971	238	0	0.00	143	18	11.18	-	-	-
CHD5	0	genome.wustl.edu	37	1	6181297	6181297	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	6181297	6181297	C	T	SNP	CHD5	ENST00000262450	human	ensembl	69_37n	-1	known	missense	c.4780	p.A1594T	0.700	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254	104	0	0.00	128	22	14.29	-	-	-
CKMT2	0	genome.wustl.edu	37	5	80554943	80554943	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	80554943	80554943	A	G	SNP	CKMT2	ENST00000254035	human	ensembl	69_37n	+1	known	missense	c.884	p.E295G	1.000	pfam_ATP-guanido_PTrfase_cat	pfam_ATP-guanido_PTrfase_cat,pfam_ATP-guanido_PTrfase_N,superfamily_ATP-guanido_PTrfase_N	-	no_errors	CKMT2	HGNC	ENSG00000131730	220	0	0.00	196	94	32.30	-	-	-
CLEC2A	0	genome.wustl.edu	37	12	10078860	10078860	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	10078860	10078860	T	C	SNP	CLEC2A	ENST00000455827	human	ensembl	69_37n	-1	known	missense	c.138	p.I46M	0.128	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC2A	HGNC	ENSG00000188393	292	0	0.00	154	83	35.02	-	-	-
CLMN	0	genome.wustl.edu	37	14	95662949	95662949	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	95662949	95662949	T	-	DEL	CLMN	ENST00000298912	human	ensembl	69_37n	-1	known	frame_shift_del	c.2594	p.K865fs	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	CLMN	HGNC	ENSG00000165959	354	0	0.00	383	152	27.49	-	-	-
CNKSR2	0	genome.wustl.edu	37	X	21627677	21627678	+	In_Frame_Ins	INS	-	-	GAG			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	21627677	21627678	-	GAG	INS	CNKSR2	ENST00000379510	human	ensembl	69_37n	+1	known	in_frame_ins	c.2634_2635	p.882in_frame_insE	0.989:0.997	NULL	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR2	HGNC	ENSG00000149970	18	0	0.00	12	4	25.00	-	-	-
COL6A6	0	genome.wustl.edu	37	3	130380867	130380867	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	130380867	130380867	T	-	DEL	COL6A6	ENST00000358511	human	ensembl	69_37n	+1	known	frame_shift_del	c.6217	p.L2074fs	0.958	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	166	0	0.00	128	62	32.29	-	-	-
CPSF3	0	genome.wustl.edu	37	2	9570133	9570135	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	9570133	9570135	CTC	-	DEL	CPSF3	ENST00000238112	human	ensembl	69_37n	+1	known	in_frame_del	c.196_198	p.L68in_frame_del	1.000:1.000:0.989	pfam_Beta-lactamas-like,smart_Beta-lactamas-like	pfam_CPSF73-100_C,pfam_Beta_Casp,pfam_Beta-lactamas-like,pfam_RMMBL,smart_Beta-lactamas-like	-	no_errors	CPSF3	HGNC	ENSG00000119203	491	0	0.00	539	66	10.89	-	-	-
CPXM2	0	genome.wustl.edu	37	10	125521407	125521407	+	Silent	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	125521407	125521407	G	T	SNP	CPXM2	ENST00000241305	human	ensembl	69_37n	-1	known	silent	c.1758	p.S586	0.993	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	CPXM2	HGNC	ENSG00000121898	36	0	0.00	16	19	54.29	-	-	-
CRAT	0	genome.wustl.edu	37	9	131864323	131864323	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	131864323	131864323	T	C	SNP	CRAT	ENST00000318080	human	ensembl	69_37n	-1	known	missense	c.644	p.D215G	0.994	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CRAT	HGNC	ENSG00000095321	145	1	0.68	148	36	19.57	-	-	-
CRIPAK	0	genome.wustl.edu	37	4	1389289	1389289	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	1389289	1389289	C	T	SNP	CRIPAK	ENST00000324803	human	ensembl	69_37n	+1	known	silent	c.990	p.P330	0.008	smart_Post-SET_dom	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979	52	0	0.00	54	27	32.93	-	-	-
CSMD1	0	genome.wustl.edu	37	8	2815319	2815319	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	2815319	2815319	G	A	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	missense	c.9716	p.T3239M	0.156	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	152	1	0.65	142	26	15.38	-	-	-
DALRD3	0	genome.wustl.edu	37	3	49053683	49053684	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	49053683	49053684	GT	-	DEL	DALRD3	ENST00000341949	human	ensembl	69_37n	-1	known	frame_shift_del	c.1237_1236	p.F414fs	1.000:0.518	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd	-	no_errors	DALRD3	HGNC	ENSG00000178149	111	0	0.00	42	36	46.15	-	-	-
DAZAP1	0	genome.wustl.edu	37	19	1430254	1430254	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	1430254	1430254	C	-	DEL	DAZAP1	ENST00000233078	human	ensembl	69_37n	+1	known	frame_shift_del	c.764	p.P257fs	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626	20	0	0.00	28	23	41.07	-	-	-
DCAF4L2	0	genome.wustl.edu	37	8	88885440	88885440	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	88885440	88885440	G	A	SNP	DCAF4L2	ENST00000319675	human	ensembl	69_37n	-1	known	missense	c.760	p.R254C	0.994	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L2	HGNC	ENSG00000176566	141	0	0.00	129	67	34.18	-	-	-
DCTN1	0	genome.wustl.edu	37	2	74593377	74593377	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	74593377	74593377	G	-	DEL	DCTN1	ENST00000361874	human	ensembl	69_37n	-1	known	frame_shift_del	c.2754	p.S919fs	0.997	NULL	pfam_Dynactin,pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Polyketide_synth_docking,pfscan_CAP-Gly_domain	-	no_errors	DCTN1	HGNC	ENSG00000204843	79	0	0.00	82	10	10.75	-	-	-
DDX20	0	genome.wustl.edu	37	1	112305336	112305336	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	112305336	112305336	T	C	SNP	DDX20	ENST00000369702	human	ensembl	69_37n	+1	known	missense	c.1142	p.V381A	1.000	pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX20	HGNC	ENSG00000064703	371	0	0.00	448	72	13.82	-	-	-
DENND1B	0	genome.wustl.edu	37	1	197480015	197480015	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	197480015	197480015	C	T	SNP	DENND1B	ENST00000391979	human	ensembl	69_37n	-1	putative	missense	c.823	p.D275N	0.998	NULL	NULL	-	no_start_codon	DENND1B	HGNC	ENSG00000213047	61	0	0.00	10	11	50.00	-	-	-
DIP2B	0	genome.wustl.edu	37	12	51092970	51092970	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	51092970	51092970	A	-	DEL	DIP2B	ENST00000301180	human	ensembl	69_37n	+1	known	frame_shift_del	c.2310	p.N772fs	0.285	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084	295	0	0.00	343	50	12.69	-	-	-
DNAH5	0	genome.wustl.edu	37	5	13871098	13871098	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	13871098	13871098	G	A	SNP	DNAH5	ENST00000265104	human	ensembl	69_37n	-1	known	silent	c.3612	p.F1204	0.099	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	157	0	0.00	73	45	38.14	-	-	-
DOCK10	0	genome.wustl.edu	37	2	225750871	225750871	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	225750871	225750871	C	-	DEL	DOCK10	ENST00000258390	human	ensembl	69_37n	-1	known	frame_shift_del	c.521	p.G174fs	0.999	NULL	pfam_DOCK,pfam_DUF3398,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905	63	0	0.00	47	18	26.47	-	-	-
DPP7	0	genome.wustl.edu	37	9	140006430	140006430	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	140006430	140006430	A	G	SNP	DPP7	ENST00000371579	human	ensembl	69_37n	-1	known	missense	c.1102	p.F368L	1.000	pfam_Peptidase_S28	pfam_Peptidase_S28,pfam_AB_hydrolase_1	-	no_errors	DPP7	HGNC	ENSG00000176978	64	0	0.00	58	30	34.09	-	-	-
DST	0	genome.wustl.edu	37	6	56495093	56495095	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	56495093	56495095	CTT	-	DEL	DST	ENST00000370754	human	ensembl	69_37n	-1	known	in_frame_del	c.4132_4130	p.E1377in_frame_del	1.000:1.000:1.000	superfamily_ABC_transptrTM_dom_typ1	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	DST	HGNC	ENSG00000151914	264	0	0.00	226	99	30.46	-	-	-
DTX2	0	genome.wustl.edu	37	7	76126704	76126704	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	76126704	76126704	C	T	SNP	DTX2	ENST00000324432	human	ensembl	69_37n	+1	known	missense	c.1060	p.R354C	1.000	NULL	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX2	Clone_based_vega_gene	ENSG00000091073	98	0	0.00	130	48	26.97	-	-	-
EDNRB	0	genome.wustl.edu	37	13	78477305	78477305	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	13	78477305	78477305	T	C	SNP	EDNRB	ENST00000334286	human	ensembl	69_37n	-1	known	missense	c.787	p.T263A	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_ETB_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_ETB_rcpt,prints_Endthln_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Bombsn_rcpt,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	EDNRB	HGNC	ENSG00000136160	210	1	0.47	64	41	39.05	-	-	-
ENPP4	0	genome.wustl.edu	37	6	46107649	46107650	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	46107649	46107650	-	T	INS	ENPP4	ENST00000321037	human	ensembl	69_37n	+1	known	frame_shift_ins	c.329_330	p.W112fs	1.000:0.956	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP4	HGNC	ENSG00000001561	86	0	0.00	30	15	33.33	-	-	-
EPAS1	0	genome.wustl.edu	37	2	46607728	46607728	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	46607728	46607728	G	A	SNP	EPAS1	ENST00000263734	human	ensembl	69_37n	+1	known	nonsense	c.1917	p.W639*	1.000	NULL	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_HLH_DNA-bd,tigrfam_PAS	-	no_errors	EPAS1	HGNC	ENSG00000116016	26	0	0.00	40	10	19.61	-	-	-
FAM123B	0	genome.wustl.edu	37	X	63411278	63411278	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	63411278	63411278	G	A	SNP	FAM123B	ENST00000330258	human	ensembl	69_37n	-1	known	missense	c.1889	p.A630V	0.001	NULL	pfam_Uncharacterised_FAM123	-	no_errors	FAM123B	HGNC	ENSG00000184675	38	0	0.00	36	25	40.98	-	-	-
FAM151B	0	genome.wustl.edu	37	5	79797660	79797660	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	79797660	79797660	T	C	SNP	FAM151B	ENST00000282226	human	ensembl	69_37n	+1	known	silent	c.75	p.I25	0.985	NULL	pfam_DUF2181	-	no_errors	FAM151B	HGNC	ENSG00000152380	142	0	0.00	152	50	24.75	-	-	-
FAM171A1	0	genome.wustl.edu	37	10	15262985	15262985	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	15262985	15262985	G	-	DEL	FAM171A1	ENST00000378116	human	ensembl	69_37n	-1	known	frame_shift_del	c.829	p.Q277fs	1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468	45	0	0.00	24	12	32.43	-	-	-
FAM173B	0	genome.wustl.edu	37	5	10239163	10239163	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	10239163	10239163	T	-	DEL	FAM173B	ENST00000504390	human	ensembl	69_37n	-1	known	frame_shift_del	c.322	p.T108fs	0.000	NULL	NULL	-	no_errors	FAM173B	HGNC	ENSG00000150756	119	0	0.00	117	17	12.69	-	-	-
FAM208A	0	genome.wustl.edu	37	3	56667416	56667416	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	56667416	56667416	C	T	SNP	FAM208A	ENST00000355628	human	ensembl	69_37n	-1	known	missense	c.3220	p.E1074K	0.405	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946	217	0	0.00	126	50	28.41	-	-	-
FAM35B	0	genome.wustl.edu	37	10	46927960	46927963	+	RNA	DEL	ACAA	ACAA	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	46927960	46927963	ACAA	-	DEL	FAM35B	ENST00000497389	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.998:0.988:0.986:0.965	-	-	-	no_errors	FAM35B	HGNC	ENSG00000165874	142	0	0.00	105	31	22.79	-	-	-
FAM47A	0	genome.wustl.edu	37	X	34148695	34148695	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	34148695	34148695	A	T	SNP	FAM47A	ENST00000346193	human	ensembl	69_37n	-1	known	missense	c.1701	p.H567Q	0.003	NULL	NULL	-	no_errors	FAM47A	HGNC	ENSG00000185448	274	0	0.00	306	67	17.91	-	-	-
FAM47A	0	genome.wustl.edu	37	X	34150200	34150200	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	34150200	34150200	C	T	SNP	FAM47A	ENST00000346193	human	ensembl	69_37n	-1	known	missense	c.196	p.E66K	0.002	NULL	NULL	-	no_errors	FAM47A	HGNC	ENSG00000185448	193	0	0.00	226	29	11.28	-	-	-
FAM73A	0	genome.wustl.edu	37	1	78272735	78272735	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	78272735	78272735	A	T	SNP	FAM73A	ENST00000370791	human	ensembl	69_37n	+1	known	missense	c.586	p.I196F	0.198	pfam_DUF2217	pfam_DUF2217	-	no_errors	FAM73A	HGNC	ENSG00000180488	332	0	0.00	291	152	34.31	-	-	-
FBXO15	0	genome.wustl.edu	37	18	71807443	71807443	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	71807443	71807443	A	G	SNP	FBXO15	ENST00000419743	human	ensembl	69_37n	-1	known	missense	c.221	p.L74P	0.903	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO15	HGNC	ENSG00000141665	113	0	0.00	97	38	28.15	-	-	-
FBXW10	0	genome.wustl.edu	37	17	18682399	18682399	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	18682399	18682399	A	G	SNP	FBXW10	ENST00000308799	human	ensembl	69_37n	+1	known	missense	c.2974	p.T992A	0.609	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW10	HGNC	ENSG00000171931	95	0	0.00	28	7	20.00	-	-	-
FCGR2A	0	genome.wustl.edu	37	1	161487829	161487829	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	161487829	161487829	A	C	SNP	FCGR2A	ENST00000271450	human	ensembl	69_37n	+1	known	missense	c.845	p.E282A	0.009	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCGR2A	HGNC	ENSG00000143226	374	0	0.00	470	62	11.61	-	-	-
FKBP15	0	genome.wustl.edu	37	9	115936859	115936859	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	115936859	115936859	A	G	SNP	FKBP15	ENST00000238256	human	ensembl	69_37n	-1	known	missense	c.2228	p.L743P	1.000	superfamily_Regulat_G_prot_signal_superfam	pfam_PPIase_FKBP_dom,superfamily_Regulat_G_prot_signal_superfam,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP15	HGNC	ENSG00000119321	138	0	0.00	116	22	15.83	-	-	-
FKBP9	0	genome.wustl.edu	37	7	33044891	33044891	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	33044891	33044891	G	A	SNP	FKBP9	ENST00000538336	human	ensembl	69_37n	+1	known	silent	c.1800	p.R600	0.990	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	pfam_PPIase_FKBP_dom,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP9	HGNC	ENSG00000122642	520	0	0.00	613	75	10.90	-	-	-
FLII	0	genome.wustl.edu	37	17	18149770	18149770	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	18149770	18149770	G	A	SNP	FLII	ENST00000327031	human	ensembl	69_37n	-1	known	missense	c.3058	p.R1020C	1.000	smart_Gelsolin	pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Gelsolin,prints_Gelsolin	-	no_errors	FLII	HGNC	ENSG00000177731	118	0	0.00	39	58	59.79	-	-	-
FLNC	0	genome.wustl.edu	37	7	128488091	128488091	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	128488091	128488091	G	A	SNP	FLNC	ENST00000325888	human	ensembl	69_37n	+1	known	missense	c.4549	p.V1517I	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	17	0	0.00	19	14	42.42	-	-	-
FLRT3	0	genome.wustl.edu	37	20	14307596	14307596	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	20	14307596	14307596	C	T	SNP	FLRT3	ENST00000341420	human	ensembl	69_37n	-1	known	missense	c.557	p.R186H	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT3	HGNC	ENSG00000125848	134	0	0.00	51	17	25.00	-	-	-
FLYWCH1	0	genome.wustl.edu	37	16	2983745	2983745	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	2983745	2983745	G	-	DEL	FLYWCH1	ENST00000399667	human	ensembl	69_37n	+1	known	frame_shift_del	c.1278	p.G428fs	0.959	pfam_Znf_FLYWCH	pfam_Znf_FLYWCH	-	no_errors	FLYWCH1	HGNC	ENSG00000059122	62	0	0.00	91	15	14.02	-	-	-
FMR1	0	genome.wustl.edu	37	X	147026442	147026442	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	147026442	147026442	G	A	SNP	FMR1	ENST00000370475	human	ensembl	69_37n	+1	known	missense	c.1525	p.E509K	1.000	pfam_Frag_X_MRP_fam	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FMR1	HGNC	ENSG00000102081	253	0	0.00	193	43	18.22	-	-	-
FOXD4L1	0	genome.wustl.edu	37	2	114257228	114257228	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	114257228	114257228	G	A	SNP	FOXD4L1	ENST00000306507	human	ensembl	69_37n	+1	known	missense	c.395	p.G132D	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4L1	HGNC	ENSG00000184492	74	0	0.00	64	33	34.02	-	-	-
FOXM1	0	genome.wustl.edu	37	12	2968543	2968543	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	2968543	2968543	C	A	SNP	FOXM1	ENST00000342628	human	ensembl	69_37n	-1	known	missense	c.1667	p.S556I	0.001	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXM1	HGNC	ENSG00000111206	145	0	0.00	123	44	26.35	-	-	-
FUT10	0	genome.wustl.edu	37	8	33318928	33318928	+	Splice_Site	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	33318928	33318928	A	G	SNP	FUT10	ENST00000524021	human	ensembl	69_37n	-1	novel	splice_site	c.1+2	e0+2	0.704	-	-	-	no_errors	FUT10	HGNC	ENSG00000172728	105	0	0.00	82	39	32.23	-	-	-
FZD9	0	genome.wustl.edu	37	7	72849076	72849076	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	72849076	72849076	G	A	SNP	FZD9	ENST00000344575	human	ensembl	69_37n	+1	known	missense	c.739	p.A247T	0.999	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD9	HGNC	ENSG00000188763	61	0	0.00	41	18	30.00	-	-	-
GALNT11	0	genome.wustl.edu	37	7	151805352	151805352	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	151805352	151805352	G	T	SNP	GALNT11	ENST00000320311	human	ensembl	69_37n	+1	known	missense	c.942	p.E314D	0.138	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT11	HGNC	ENSG00000178234	51	0	0.00	56	17	23.29	-	-	-
GALNTL5	0	genome.wustl.edu	37	7	151699798	151699798	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	151699798	151699798	G	A	SNP	GALNTL5	ENST00000392800	human	ensembl	69_37n	+1	known	splice_site	c.659-1	e5-1	1.000	-	-	-	no_errors	GALNTL5	HGNC	ENSG00000106648	155	0	0.00	104	43	29.25	-	-	-
GBF1	0	genome.wustl.edu	37	10	104122393	104122393	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	104122393	104122393	A	G	SNP	GBF1	ENST00000369983	human	ensembl	69_37n	+1	known	missense	c.1845	p.I615M	0.000	NULL	pfam_Sec7,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	-	no_errors	GBF1	HGNC	ENSG00000107862	259	0	0.00	237	96	28.83	-	-	-
GDI1	0	genome.wustl.edu	37	X	153667353	153667353	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	153667353	153667353	G	A	SNP	GDI1	ENST00000447750	human	ensembl	69_37n	+1	known	silent	c.255	p.G85	0.978	pfam_GDP_dissociation_inhibitor,prints_RabGDI,prints_GDP_dissociation_inhibitor	pfam_GDP_dissociation_inhibitor,prints_RabGDI,prints_GDP_dissociation_inhibitor	-	no_errors	GDI1	HGNC	ENSG00000203879	77	0	0.00	80	20	20.00	-	-	-
GGT5	0	genome.wustl.edu	37	22	24621312	24621312	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	24621312	24621312	T	C	SNP	GGT5	ENST00000425408	human	ensembl	69_37n	-1	putative	missense	c.212	p.H71R	0.042	pfam_GGT_peptidase,prints_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	GGT5	HGNC	ENSG00000099998	55	0	0.00	17	22	55.00	-	-	-
GINS4	0	genome.wustl.edu	37	8	41397268	41397268	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	41397268	41397268	G	A	SNP	GINS4	ENST00000276533	human	ensembl	69_37n	+1	known	silent	c.369	p.S123	0.817	pfam_GINS_complex,pirsf_GINS_Sld5	pfam_GINS_complex,pirsf_GINS_Sld5	-	no_errors	GINS4	HGNC	ENSG00000147536	107	0	0.00	118	14	10.61	-	-	-
GJB3	0	genome.wustl.edu	37	1	35250494	35250495	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	35250494	35250495	GG	-	DEL	GJB3	ENST00000373362	human	ensembl	69_37n	+1	known	frame_shift_del	c.131_132	p.D46fs	1.000:1.000	pfam_Connexin_N,smart_Connexin_N	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin31	-	no_errors	GJB3	HGNC	ENSG00000188910	154	0	0.00	153	74	32.60	-	-	-
GLTSCR1	0	genome.wustl.edu	37	19	48197891	48197891	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	48197891	48197891	C	-	DEL	GLTSCR1	ENST00000396720	human	ensembl	69_37n	+1	known	frame_shift_del	c.2803	p.P937fs	0.226	NULL	NULL	-	no_errors	GLTSCR1	HGNC	ENSG00000063169	19	0	0.00	22	13	37.14	-	-	-
GOLGA6L7P	0	genome.wustl.edu	37	15	29090683	29090684	+	RNA	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	29090683	29090684	-	G	INS	GOLGA6L7P	ENST00000569815	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	GOLGA6L7P	HGNC	ENSG00000261649	11	0	0.00	5	7	58.33	-	-	-
GPR101	0	genome.wustl.edu	37	X	136113257	136113257	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	136113257	136113257	T	C	SNP	GPR101	ENST00000298110	human	ensembl	69_37n	-1	known	missense	c.577	p.T193A	0.993	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR101	HGNC	ENSG00000165370	25	0	0.00	25	5	16.67	-	-	-
GPS1	0	genome.wustl.edu	37	17	80010320	80010320	+	Splice_Site	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	80010320	80010320	T	C	SNP	GPS1	ENST00000578392	human	ensembl	69_37n	+1	known	splice_site	c.220+2	e2+2	0.998	-	-	-	no_errors	GPS1	HGNC	ENSG00000169727	23	0	0.00	22	11	33.33	-	-	-
GPSM1	0	genome.wustl.edu	37	9	139243205	139243206	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	139243205	139243206	CT	-	DEL	GPSM1	ENST00000440944	human	ensembl	69_37n	+1	known	frame_shift_del	c.1264_1265	p.L422fs	1.000:1.000	NULL	pfam_GoLoco_motif,pfam_TPR-1,smart_TPR_repeat,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GPSM1	HGNC	ENSG00000160360	20	0	0.00	19	10	33.33	-	-	-
GRIN2A	0	genome.wustl.edu	37	16	9858202	9858202	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	9858202	9858202	G	A	SNP	GRIN2A	ENST00000330684	human	ensembl	69_37n	-1	known	missense	c.3199	p.R1067W	1.000	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454	91	0	0.00	93	15	13.89	-	-	-
GRM3	0	genome.wustl.edu	37	7	86468223	86468223	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	86468223	86468223	C	T	SNP	GRM3	ENST00000361669	human	ensembl	69_37n	+1	known	nonsense	c.1393	p.R465*	0.677	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B,pfscan_GPCR_3_C	-	no_errors	GRM3	HGNC	ENSG00000198822	134	0	0.00	72	27	27.27	-	-	-
GRWD1	0	genome.wustl.edu	37	19	48953639	48953639	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	48953639	48953639	C	T	SNP	GRWD1	ENST00000253237	human	ensembl	69_37n	+1	known	silent	c.538	p.L180	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Histone-bd_RBBP4,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	GRWD1	HGNC	ENSG00000105447	131	1	0.76	126	83	39.52	-	-	-
GTPBP3	0	genome.wustl.edu	37	19	17450401	17450401	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	17450401	17450401	C	T	SNP	GTPBP3	ENST00000358792	human	ensembl	69_37n	+1	known	missense	c.1063	p.R355W	0.959	pfam_GTP_binding_domain,tigrfam_Small_GTP-bd_dom	pfam_GTP-bd_TrmE_N,pfam_GTP_binding_domain,tigrfam_Small_GTP-bd_dom	-	no_errors	GTPBP3	HGNC	ENSG00000130299	41	0	0.00	38	18	31.58	-	-	-
GYS1	0	genome.wustl.edu	37	19	49490492	49490492	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	49490492	49490492	C	T	SNP	GYS1	ENST00000323798	human	ensembl	69_37n	-1	known	missense	c.451	p.A151T	1.000	pfam_Glycogen_synth,pfam_Starch_synth_cat_dom	pfam_Glycogen_synth,pfam_Glyco_trans_1,pfam_Starch_synth_cat_dom	-	no_errors	GYS1	HGNC	ENSG00000104812	72	0	0.00	52	39	42.39	-	-	-
HBP1	0	genome.wustl.edu	37	7	106836466	106836466	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	106836466	106836466	A	-	DEL	HBP1	ENST00000222574	human	ensembl	69_37n	+1	known	frame_shift_del	c.1255	p.N420fs	1.000	superfamily_HMG_superfamily	pfam_Ataxin-1_HBP1,pfam_HMG_superfamily,superfamily_Ataxin-1_HBP1,superfamily_HMG_superfamily,smart_Ataxin_AXH_dom,smart_HMG_superfamily,pfscan_Ataxin-1_HBP1,pfscan_HMG_superfamily	-	no_errors	HBP1	HGNC	ENSG00000105856	173	0	0.00	189	22	10.33	-	-	-
HDGFRP2	0	genome.wustl.edu	37	19	4493798	4493799	+	In_Frame_Ins	INS	-	-	TCC			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	4493798	4493799	-	TCC	INS	HDGFRP2	ENST00000301284	human	ensembl	69_37n	+1	known	in_frame_ins	c.777_778	p.263in_frame_insS	0.004:0.060	NULL	pfam_LEDGF,pfam_PWWP,smart_PWWP,pfscan_PWWP	-	no_errors	CTB-50L17.10	Clone_based_vega_gene	ENSG00000167674	17	0	0.00	10	3	23.08	-	-	-
HEATR1	0	genome.wustl.edu	37	1	236727799	236727799	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	236727799	236727799	T	-	DEL	HEATR1	ENST00000366582	human	ensembl	69_37n	-1	known	frame_shift_del	c.4598	p.K1533fs	1.000	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285	246	0	0.00	201	116	35.58	-	-	-
HECTD2	0	genome.wustl.edu	37	10	93247499	93247499	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	93247499	93247499	G	C	SNP	HECTD2	ENST00000446394	human	ensembl	69_37n	+1	known	missense	c.1167	p.Q389H	0.730	NULL	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	-	no_errors	HECTD2	HGNC	ENSG00000165338	347	1	0.29	319	51	13.78	-	-	-
HGFAC	0	genome.wustl.edu	37	4	3451048	3451048	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	3451048	3451048	C	T	SNP	HGFAC	ENST00000382774	human	ensembl	69_37n	+1	known	missense	c.1870	p.R624W	0.008	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1_S6,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EGF-like_dom,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EGF-like,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	HGFAC	HGNC	ENSG00000109758	21	0	0.00	12	8	38.10	-	-	-
HIVEP2	0	genome.wustl.edu	37	6	143095539	143095539	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	143095539	143095539	T	C	SNP	HIVEP2	ENST00000012134	human	ensembl	69_37n	-1	known	missense	c.337	p.T113A	0.917	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818	95	0	0.00	32	6	14.63	-	-	-
IDS	0	genome.wustl.edu	37	X	148579795	148579795	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	148579795	148579795	C	T	SNP	IDS	ENST00000340855	human	ensembl	69_37n	-1	known	missense	c.551	p.C184Y	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404	76	0	0.00	68	32	31.68	-	-	-
IFNA16	0	genome.wustl.edu	37	9	21216922	21216922	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	21216922	21216922	C	T	SNP	IFNA16	ENST00000380216	human	ensembl	69_37n	-1	known	missense	c.383	p.G128E	0.001	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA16	HGNC	ENSG00000147885	380	0	0.00	230	94	29.01	-	-	-
IL25	0	genome.wustl.edu	37	14	23844943	23844943	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	23844943	23844943	T	C	SNP	IL25	ENST00000329715	human	ensembl	69_37n	+1	known	missense	c.388	p.S130P	0.999	pfam_Interleukin-17	pfam_Interleukin-17	-	no_errors	IL25	HGNC	ENSG00000166090	54	0	0.00	69	13	15.85	-	-	-
IMPG2	0	genome.wustl.edu	37	3	100992437	100992439	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	100992437	100992439	TTC	-	DEL	IMPG2	ENST00000193391	human	ensembl	69_37n	-1	known	in_frame_del	c.816_814	p.E272in_frame_del	0.920:0.979:0.983	pfam_SEA,smart_SEA	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	IMPG2	HGNC	ENSG00000081148	357	0	0.00	294	148	33.11	-	-	-
INTS4	0	genome.wustl.edu	37	11	77618841	77618841	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	77618841	77618841	A	G	SNP	INTS4	ENST00000534064	human	ensembl	69_37n	-1	known	silent	c.1938	p.L646	1.000	NULL	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	INTS4	HGNC	ENSG00000149262	184	0	0.00	178	94	34.56	-	-	-
INTS8	0	genome.wustl.edu	37	8	95869179	95869179	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	95869179	95869179	C	T	SNP	INTS8	ENST00000523731	human	ensembl	69_37n	+1	known	nonsense	c.1927	p.R643*	1.000	NULL	NULL	-	no_errors	INTS8	HGNC	ENSG00000164941	86	0	0.00	56	39	41.05	-	-	-
ITGB2	0	genome.wustl.edu	37	21	46310051	46310051	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	21	46310051	46310051	T	C	SNP	ITGB2	ENST00000302347	human	ensembl	69_37n	-1	known	missense	c.1499	p.D500G	1.000	pirsf_Integrin_bsu,pfam_EGF_extracell	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB2	HGNC	ENSG00000160255	39	0	0.00	26	16	38.10	-	-	-
IYD	0	genome.wustl.edu	37	6	150715323	150715323	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	150715323	150715323	A	-	DEL	IYD	ENST00000229447	human	ensembl	69_37n	+1	known	frame_shift_del	c.619	p.V209fs	1.000	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	-	no_errors	IYD	HGNC	ENSG00000009765	225	0	0.00	88	80	45.98	-	-	-
KAT6B	0	genome.wustl.edu	37	10	76789124	76789124	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	76789124	76789124	G	A	SNP	KAT6B	ENST00000287239	human	ensembl	69_37n	+1	known	silent	c.4542	p.K1514	0.803	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650	167	0	0.00	97	57	37.01	-	-	-
KCNB2	0	genome.wustl.edu	37	8	73480397	73480397	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	73480397	73480397	A	-	DEL	KCNB2	ENST00000523207	human	ensembl	69_37n	+1	known	frame_shift_del	c.428	p.E146fs	1.000	prints_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	163	0	0.00	161	67	29.13	-	-	-
KCNH3	0	genome.wustl.edu	37	12	49934840	49934840	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	49934840	49934840	G	A	SNP	KCNH3	ENST00000257981	human	ensembl	69_37n	+1	known	missense	c.235	p.V79I	0.968	pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,pfscan_PAS,tigrfam_PAS	pfam_Ion_trans_dom,pfam_Ion_trans_2,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,tigrfam_PAS	-	no_errors	KCNH3	HGNC	ENSG00000135519	41	0	0.00	40	20	32.79	-	-	-
KDM6A	0	genome.wustl.edu	37	X	44945128	44945128	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	44945128	44945128	A	G	SNP	KDM6A	ENST00000382899	human	ensembl	69_37n	+1	known	missense	c.3473	p.N1158S	1.000	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TPR-1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KDM6A	HGNC	ENSG00000147050	633	0	0.00	482	226	31.88	-	-	-
KIAA0240	0	genome.wustl.edu	37	6	42797791	42797791	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	42797791	42797791	C	T	SNP	KIAA0240	ENST00000314073	human	ensembl	69_37n	+1	known	missense	c.1720	p.P574S	1.000	NULL	NULL	-	no_errors	KIAA0240	HGNC	ENSG00000112624	121	0	0.00	140	19	11.95	-	-	-
KIAA0947	0	genome.wustl.edu	37	5	5465333	5465333	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	5465333	5465333	A	-	DEL	KIAA0947	ENST00000296564	human	ensembl	69_37n	+1	known	frame_shift_del	c.5886	p.K1964fs	0.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	271	0	0.00	203	92	31.19	-	-	-
KIAA2026	0	genome.wustl.edu	37	9	5969043	5969043	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	5969043	5969043	T	-	DEL	KIAA2026	ENST00000399933	human	ensembl	69_37n	-1	novel	frame_shift_del	c.1188	p.K396fs	0.974	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354	82	0	0.00	57	20	25.32	-	-	-
KIF22	0	genome.wustl.edu	37	16	29809769	29809769	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	29809769	29809769	A	G	SNP	KIF22	ENST00000160827	human	ensembl	69_37n	+1	known	missense	c.341	p.H114R	1.000	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_RuvA_2-like,smart_Kinesin_motor_dom,smart_Hlx-hairpin-Hlx_DNA-bd_motif,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF22	HGNC	ENSG00000079616	110	0	0.00	103	53	33.97	-	-	-
KLHL7	0	genome.wustl.edu	37	7	23145676	23145678	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	23145676	23145678	AAG	-	DEL	KLHL7	ENST00000339077	human	ensembl	69_37n	+1	known	in_frame_del	c.31_33	p.K13in_frame_del	1.000:1.000:1.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550	66	0	0.00	75	31	29.25	-	-	-
KRT75	0	genome.wustl.edu	37	12	52818365	52818365	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	52818365	52818365	C	-	DEL	KRT75	ENST00000252245	human	ensembl	69_37n	-1	known	frame_shift_del	c.1592	p.G531fs	0.993	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454	133	0	0.00	127	51	28.65	-	-	-
KRTCAP2	0	genome.wustl.edu	37	1	155145235	155145235	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	155145235	155145235	A	G	SNP	KRTCAP2	ENST00000295682	human	ensembl	69_37n	-1	known	silent	c.216	p.G72	0.999	pfam_Uncharacterised_KRTCAP2	pfam_Uncharacterised_KRTCAP2	-	no_errors	KRTCAP2	HGNC	ENSG00000163463	94	0	0.00	117	17	12.50	-	-	-
L1TD1	0	genome.wustl.edu	37	1	62672476	62672476	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	62672476	62672476	T	A	SNP	L1TD1	ENST00000498273	human	ensembl	69_37n	+1	known	missense	c.176	p.M59K	0.616	NULL	pfam_Transposase_22,superfamily_STAT_TF_coiled-coil	-	no_errors	L1TD1	HGNC	ENSG00000240563	84	0	0.00	90	20	18.18	-	-	-
LAMA3	0	genome.wustl.edu	37	18	21419894	21419894	+	Splice_Site	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	21419894	21419894	G	T	SNP	LAMA3	ENST00000313654	human	ensembl	69_37n	+1	known	splice_site	c.3336+1	e27+1	1.000	-	-	-	no_errors	LAMA3	HGNC	ENSG00000053747	126	0	0.00	73	65	47.10	-	-	-
LCT	0	genome.wustl.edu	37	2	136558374	136558374	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	136558374	136558374	A	T	SNP	LCT	ENST00000264162	human	ensembl	69_37n	-1	known	missense	c.4669	p.S1557T	0.992	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	68	0	0.00	63	10	13.70	-	-	-
LGR5	0	genome.wustl.edu	37	12	71974205	71974205	+	Splice_Site	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	71974205	71974205	T	C	SNP	LGR5	ENST00000266674	human	ensembl	69_37n	+1	known	splice_site	c.1552+2	e16+2	1.000	-	-	-	no_errors	LGR5	HGNC	ENSG00000139292	256	1	0.39	242	28	10.33	-	-	-
LOC100132247	0	genome.wustl.edu	37	16	22503114	22503114	+	RNA	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	22503114	22503114	T	C	SNP	LOC100132247	ENST00000415654	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.942	-	-	-	no_errors	RP11-368J21.2	Clone_based_vega_gene	ENSG00000243716	51	0	0.00	77	15	16.30	-	-	-
LOXL3	0	genome.wustl.edu	37	2	74761116	74761116	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	74761116	74761116	A	T	SNP	LOXL3	ENST00000264094	human	ensembl	69_37n	-1	known	missense	c.2081	p.V694D	1.000	pfam_Lysyl_oxidase,prints_Lysyl_oxidase	pfam_Lysyl_oxidase,pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_Lysyl_oxidase,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	LOXL3	HGNC	ENSG00000115318	434	1	0.23	521	100	16.08	-	-	-
LRIT1	0	genome.wustl.edu	37	10	86001143	86001144	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	86001143	86001144	-	G	INS	LRIT1	ENST00000372105	human	ensembl	69_37n	-1	known	frame_shift_ins	c.53_52	p.Q18fs	0.289:0.600	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	LRIT1	HGNC	ENSG00000148602	9	0	0.00	8	6	42.86	-	-	-
LRP4	0	genome.wustl.edu	37	11	46898298	46898298	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	46898298	46898298	T	C	SNP	LRP4	ENST00000378623	human	ensembl	69_37n	-1	known	missense	c.3361	p.T1121A	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569	57	0	0.00	69	11	13.75	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24532703	24532703	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	24532703	24532703	C	-	DEL	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	frame_shift_del	c.2940	p.R983fs	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	47	0	0.00	37	14	26.92	-	-	-
LRRC63	0	genome.wustl.edu	37	13	46844470	46844471	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	13	46844470	46844471	-	G	INS	LRRC63	ENST00000446175	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1552_1553	p.A520fs	0.669:0.849	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	128	0	0.00	159	69	30.26	-	-	-
LRTM1	0	genome.wustl.edu	37	3	54952776	54952776	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	54952776	54952776	C	T	SNP	LRTM1	ENST00000273286	human	ensembl	69_37n	-1	known	missense	c.748	p.A250T	0.020	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	66	0	0.00	20	34	62.96	-	-	-
LUZP4	0	genome.wustl.edu	37	X	114536623	114536623	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	114536623	114536623	A	G	SNP	LUZP4	ENST00000371920	human	ensembl	69_37n	+1	known	missense	c.158	p.N53S	0.000	NULL	NULL	-	no_errors	LUZP4	HGNC	ENSG00000102021	348	0	0.00	253	169	39.95	-	-	-
LYG2	0	genome.wustl.edu	37	2	99858889	99858889	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	99858889	99858889	C	T	SNP	LYG2	ENST00000333017	human	ensembl	69_37n	-1	known	missense	c.577	p.D193N	0.995	superfamily_Lysozyme-like_dom,pirsf_Glyco_hydro_23,prints_Glyco_hydro_23	pfam_Lytic_TGlycosylase-like_cat,superfamily_Lysozyme-like_dom,pirsf_Glyco_hydro_23,prints_Glyco_hydro_23	-	no_errors	LYG2	HGNC	ENSG00000185674	176	0	0.00	125	43	25.60	-	-	-
MAGEB4	0	genome.wustl.edu	37	X	30260720	30260720	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	30260720	30260720	G	A	SNP	MAGEB4	ENST00000378982	human	ensembl	69_37n	+1	known	silent	c.468	p.Q156	0.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	79	0	0.00	83	28	25.23	-	-	-
MAML3	0	genome.wustl.edu	37	4	140640648	140640648	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	140640648	140640648	T	C	SNP	MAML3	ENST00000509479	human	ensembl	69_37n	-1	known	silent	c.3246	p.Q1082	0.497	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782	51	0	0.00	47	35	42.68	-	-	-
MAN2A2	0	genome.wustl.edu	37	15	91453858	91453858	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	91453858	91453858	C	A	SNP	MAN2A2	ENST00000558171	human	ensembl	69_37n	+1	novel	nonsense	c.266	p.S89*	1.000	pfam_Glyco_hydro_38_cen_dom,smart_Glyco_hydro_38_cen_dom	pfam_Glyco_hydro_38_cen_dom,pfam_Glyco_hydro_38_C,superfamily_Glyco_hydro-type_carb-bd,smart_Glyco_hydro_38_cen_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MAN2A2	HGNC	ENSG00000196547	70	0	0.00	78	11	12.36	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	12028690	12028690	+	Splice_Site	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	12028690	12028690	T	C	SNP	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	splice_site	c.924+2	e9+2	1.000	-	-	-	no_errors	MAP2K4	HGNC	ENSG00000065559	311	1	0.32	118	152	56.30	-	-	-
MAP3K8	0	genome.wustl.edu	37	10	30747044	30747044	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	30747044	30747044	G	T	SNP	MAP3K8	ENST00000263056	human	ensembl	69_37n	+1	known	missense	c.905	p.R302M	0.994	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K8	HGNC	ENSG00000107968	85	0	0.00	81	11	11.96	-	-	-
MAPKBP1	0	genome.wustl.edu	37	15	42110267	42110267	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	42110267	42110267	C	T	SNP	MAPKBP1	ENST00000456763	human	ensembl	69_37n	+1	known	silent	c.1983	p.D661	0.998	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	68	0	0.00	83	36	30.25	-	-	-
MBD1	0	genome.wustl.edu	37	18	47803052	47803052	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	47803052	47803052	G	A	SNP	MBD1	ENST00000424334	human	ensembl	69_37n	-1	known	missense	c.533	p.T178M	0.989	NULL	pfam_Znf_CXXC,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_integrase-typ,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_CXXC	-	no_errors	MBD1	HGNC	ENSG00000141644	117	0	0.00	75	37	33.04	-	-	-
MBOAT4	0	genome.wustl.edu	37	8	29990074	29990074	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	29990074	29990074	T	C	SNP	MBOAT4	ENST00000320542	human	ensembl	69_37n	-1	known	silent	c.693	p.G231	0.000	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	MBOAT4	HGNC	ENSG00000177669	119	0	0.00	112	14	11.02	-	-	-
MCU	0	genome.wustl.edu	37	10	74618991	74618991	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	74618991	74618991	C	T	SNP	MCU	ENST00000373053	human	ensembl	69_37n	+1	known	missense	c.277	p.R93W	1.000	NULL	pfam_Coiled-coil-dom_prot_109_C	-	no_errors	MCU	HGNC	ENSG00000156026	337	0	0.00	255	119	31.82	-	-	-
MED23	0	genome.wustl.edu	37	6	131923494	131923495	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	131923494	131923495	TA	-	DEL	MED23	ENST00000368058	human	ensembl	69_37n	-1	known	frame_shift_del	c.1977_1976	p.I659fs	0.995:1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282	232	0	0.00	53	49	47.57	-	-	-
MEGF8	0	genome.wustl.edu	37	19	42841287	42841289	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	42841287	42841289	TCT	-	DEL	MEGF8	ENST00000251268	human	ensembl	69_37n	+1	known	in_frame_del	c.1442_1444	p.F483in_frame_del	1.000:1.000:1.000	NULL	pfam_CUB,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB,superfamily_Plexin-like_fold,smart_CUB,smart_EGF-like,smart_Plexin-like,smart_EGF-like_Ca-bd,smart_EGF_laminin,pfscan_CUB,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429	67	0	0.00	74	15	16.85	-	-	-
MLH1	0	genome.wustl.edu	37	3	37042542	37042542	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	37042542	37042542	G	T	SNP	MLH1	ENST00000231790	human	ensembl	69_37n	+1	known	nonsense	c.304	p.E102*	1.000	pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,tigrfam_DNA_mismatch_repair_N	pfam_DNA_mismatch_repair_C,pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	-	no_errors	MLH1	HGNC	ENSG00000076242	358	0	0.00	114	127	52.48	-	-	-
MMP20	0	genome.wustl.edu	37	11	102465418	102465418	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	102465418	102465418	G	-	DEL	MMP20	ENST00000260228	human	ensembl	69_37n	-1	known	frame_shift_del	c.1024	p.Q342fs	1.000	pirsf_Pept_M10A_matrix_strom,superfamily_Hemopexin/matrixin,smart_Hemopexin/matrixin_repeat	pirsf_Pept_M10A_matrix_strom,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,prints_Pept_M10A_matrixin	-	no_errors	MMP20	HGNC	ENSG00000137674	132	0	0.00	106	17	13.60	-	-	-
MMP20	0	genome.wustl.edu	37	11	102487558	102487558	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	102487558	102487558	T	-	DEL	MMP20	ENST00000260228	human	ensembl	69_37n	-1	known	frame_shift_del	c.359	p.N120fs	0.999	pirsf_Pept_M10A_matrix_strom,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_matrix_strom,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,prints_Pept_M10A_matrixin	-	no_errors	MMP20	HGNC	ENSG00000137674	179	0	0.00	139	71	33.65	-	-	-
MORN1	0	genome.wustl.edu	37	1	2319730	2319730	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	2319730	2319730	C	T	SNP	MORN1	ENST00000449373	human	ensembl	69_37n	-1	known	missense	c.47	p.R16H	0.041	NULL	NULL	-	no_start_codon	MORN1	HGNC	ENSG00000116151	197	0	0.00	155	83	34.87	-	-	-
MRGPRX1	0	genome.wustl.edu	37	11	18955816	18955816	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	18955816	18955816	C	T	SNP	MRGPRX1	ENST00000302797	human	ensembl	69_37n	-1	known	nonsense	c.516	p.W172*	0.009	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	MRGPRX1	HGNC	ENSG00000170255	299	0	0.00	245	142	36.69	-	-	-
MTHFD1	0	genome.wustl.edu	37	14	64891576	64891576	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	64891576	64891576	C	T	SNP	MTHFD1	ENST00000216605	human	ensembl	69_37n	+1	known	missense	c.950	p.A317V	1.000	pfam_THF_DH/CycHdrlase_NAD-bd_dom,prints_THF_DH/CycHdrlase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1	HGNC	ENSG00000100714	145	0	0.00	214	33	13.15	-	-	-
MUC5B	0	genome.wustl.edu	37	11	1268579	1268579	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	1268579	1268579	T	G	SNP	MUC5B	ENST00000447027	human	ensembl	69_37n	+1	known	missense	c.10478	p.V3493G	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	290	0	0.00	238	95	28.44	-	-	-
MYBL1	0	genome.wustl.edu	37	8	67488453	67488453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	67488453	67488453	T	-	DEL	MYBL1	ENST00000522677	human	ensembl	69_37n	-1	known	frame_shift_del	c.1259	p.N420fs	0.992	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697	381	0	0.00	271	228	44.88	-	-	-
MYH15	0	genome.wustl.edu	37	3	108129537	108129537	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	108129537	108129537	T	C	SNP	MYH15	ENST00000273353	human	ensembl	69_37n	-1	known	missense	c.4448	p.Q1483R	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821	67	0	0.00	62	40	38.83	-	-	-
MYH15	0	genome.wustl.edu	37	3	108189615	108189615	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	108189615	108189615	G	A	SNP	MYH15	ENST00000273353	human	ensembl	69_37n	-1	known	missense	c.1373	p.A458V	0.007	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821	127	0	0.00	91	43	31.39	-	-	-
MYT1L	0	genome.wustl.edu	37	2	1946770	1946771	+	In_Frame_Ins	INS	-	-	TCC			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	1946770	1946771	-	TCC	INS	MYT1L	ENST00000399161	human	ensembl	69_37n	-1	known	in_frame_ins	c.489_488	p.167in_frame_insE	0.991:0.950	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	170	0	0.00	221	49	18.15	-	-	-
NAA20	0	genome.wustl.edu	37	20	20003100	20003100	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	20	20003100	20003100	T	C	SNP	NAA20	ENST00000334982	human	ensembl	69_37n	+1	known	silent	c.54	p.I18	1.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAA20	HGNC	ENSG00000173418	479	0	0.00	509	77	13.14	-	-	-
NALCN	0	genome.wustl.edu	37	13	101714459	101714459	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	13	101714459	101714459	T	C	SNP	NALCN	ENST00000251127	human	ensembl	69_37n	-1	known	missense	c.4616	p.Y1539C	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	38	0	0.00	28	30	50.85	-	-	-
NAT10	0	genome.wustl.edu	37	11	34164994	34164994	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	34164994	34164994	A	G	SNP	NAT10	ENST00000257829	human	ensembl	69_37n	+1	known	missense	c.2888	p.Y963C	1.000	NULL	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372	382	0	0.00	428	96	18.29	-	-	-
NEK9	0	genome.wustl.edu	37	14	75577041	75577041	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	75577041	75577041	T	C	SNP	NEK9	ENST00000238616	human	ensembl	69_37n	-1	known	silent	c.972	p.A324	0.999	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK9	HGNC	ENSG00000119638	609	1	0.16	662	88	11.72	-	-	-
NKD2	0	genome.wustl.edu	37	5	1033615	1033615	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	1033615	1033615	G	A	SNP	NKD2	ENST00000296849	human	ensembl	69_37n	+1	known	splice_site	c.330+1	e5+1	0.284	-	-	-	no_errors	NKD2	HGNC	ENSG00000145506	20	0	0.00	12	4	25.00	-	-	-
NLGN3	0	genome.wustl.edu	37	X	70389300	70389300	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	70389300	70389300	C	A	SNP	NLGN3	ENST00000358741	human	ensembl	69_37n	+1	known	missense	c.1900	p.L634M	1.000	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338	111	0	0.00	89	51	36.43	-	-	-
NOL9	0	genome.wustl.edu	37	1	6610529	6610529	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	6610529	6610529	G	A	SNP	NOL9	ENST00000377705	human	ensembl	69_37n	-1	known	silent	c.543	p.Y181	0.001	NULL	pfam_Pre-mRNA_cleavage_cplxII_Clp1	-	no_errors	NOL9	HGNC	ENSG00000162408	281	0	0.00	245	150	37.97	-	-	-
NPR2	0	genome.wustl.edu	37	9	35792578	35792578	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	35792578	35792578	G	A	SNP	NPR2	ENST00000342694	human	ensembl	69_37n	+1	known	missense	c.173	p.R58Q	1.000	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899	16	0	0.00	12	4	25.00	-	-	-
NR1D1	0	genome.wustl.edu	37	17	38252334	38252334	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	38252334	38252334	C	T	SNP	NR1D1	ENST00000246672	human	ensembl	69_37n	-1	known	missense	c.611	p.R204H	1.000	prints_Str_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	NR1D1	HGNC	ENSG00000126368	11	0	0.00	7	5	38.46	-	-	-
NRXN1	0	genome.wustl.edu	37	2	50758375	50758375	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	50758375	50758375	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	69_37n	-1	known	silent	c.2313	p.T771	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	140	0	0.00	67	31	31.63	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123657271	123657271	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	123657271	123657271	C	T	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	silent	c.2976	p.P992	0.956	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	302	1	0.33	185	115	38.33	-	-	-
ODZ3	0	genome.wustl.edu	37	4	183714372	183714372	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	183714372	183714372	C	T	SNP	ODZ3	ENST00000406950	human	ensembl	69_37n	+1	known	nonsense	c.6547	p.R2183*	0.997	superfamily_Cyt_c_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c_dom,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ3	HGNC	ENSG00000218336	169	0	0.00	121	86	41.55	-	-	-
OFCC1	0	genome.wustl.edu	37	6	9897162	9897162	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	9897162	9897162	A	G	SNP	OFCC1	ENST00000469656	human	ensembl	69_37n	-1	known	missense	c.311	p.L104P	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	OFCC1	HGNC	ENSG00000181355	189	0	0.00	198	79	28.52	-	-	-
OR5T2	0	genome.wustl.edu	37	11	55999765	55999765	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	55999765	55999765	C	T	SNP	OR5T2	ENST00000313264	human	ensembl	69_37n	-1	known	silent	c.897	p.V299	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5T2	HGNC	ENSG00000181718	257	0	0.00	240	33	12.09	-	-	-
OSBPL1A	0	genome.wustl.edu	37	18	21759703	21759703	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	21759703	21759703	G	A	SNP	OSBPL1A	ENST00000319481	human	ensembl	69_37n	-1	known	nonsense	c.1909	p.R637*	0.999	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447	178	0	0.00	138	92	40.00	-	-	-
PCBP2	0	genome.wustl.edu	37	12	53848642	53848642	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	53848642	53848642	A	G	SNP	PCBP2	ENST00000546463	human	ensembl	69_37n	+1	known	missense	c.58	p.M20V	1.000	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP2	HGNC	ENSG00000197111	169	0	0.00	135	59	30.26	-	-	-
PCDHGA3	0	genome.wustl.edu	37	5	140724340	140724340	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	140724340	140724340	A	G	SNP	PCDHGA3	ENST00000253812	human	ensembl	69_37n	+1	known	missense	c.740	p.Y247C	0.997	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	56	0	0.00	54	25	31.65	-	-	-
PCDHGB7	0	genome.wustl.edu	37	5	140799608	140799608	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	140799608	140799608	G	C	SNP	PCDHGB7	ENST00000398594	human	ensembl	69_37n	+1	known	missense	c.2182	p.E728Q	0.003	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB7	HGNC	ENSG00000254122	130	0	0.00	134	16	10.67	-	-	-
PCNX	0	genome.wustl.edu	37	14	71444749	71444749	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	71444749	71444749	A	-	DEL	PCNX	ENST00000304743	human	ensembl	69_37n	+1	known	frame_shift_del	c.1695	p.K567fs	0.950	NULL	pfam_Pecanex	-	no_errors	PCNX	HGNC	ENSG00000100731	103	0	0.00	71	37	33.94	-	-	-
PDE6B	0	genome.wustl.edu	37	4	660344	660344	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	660344	660344	G	A	SNP	PDE6B	ENST00000496514	human	ensembl	69_37n	+1	known	missense	c.2293	p.A765T	0.412	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6B	HGNC	ENSG00000133256	49	0	0.00	94	14	12.96	-	-	-
PEX2	0	genome.wustl.edu	37	8	77896091	77896091	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	77896091	77896091	A	G	SNP	PEX2	ENST00000357039	human	ensembl	69_37n	-1	known	silent	c.324	p.V108	0.905	pfam_Pex_N	pfam_Pex_N,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PEX2	HGNC	ENSG00000164751	137	0	0.00	100	64	39.02	-	-	-
PHF2	0	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	96422612	96422612	A	-	DEL	PHF2	ENST00000359246	human	ensembl	69_37n	+1	known	frame_shift_del	c.1468	p.K492fs	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724	53	0	0.00	24	14	35.90	-	-	-
PIGW	0	genome.wustl.edu	37	17	34893944	34893944	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	34893944	34893944	C	G	SNP	PIGW	ENST00000328396	human	ensembl	69_37n	+1	known	missense	c.994	p.H332D	0.000	pfam_GWT1,pirsf_GWT1	pfam_GWT1,pirsf_GWT1	-	no_errors	PIGW	HGNC	ENSG00000184886	177	0	0.00	171	84	32.94	-	-	-
PIK3C2A	0	genome.wustl.edu	37	11	17122898	17122900	+	In_Frame_Del	DEL	AAC	AAC	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	AAC	AAC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	17122898	17122900	AAC	-	DEL	PIK3C2A	ENST00000265970	human	ensembl	69_37n	-1	known	in_frame_del	c.3935_3933	p.L1311in_frame_del	1.000:1.000:1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_C2_Ca-dep,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,pfscan_C2_membr_targeting,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2A	HGNC	ENSG00000011405	302	0	0.00	245	132	34.83	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178916938	178916940	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	178916938	178916940	GAA	-	DEL	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	in_frame_del	c.325_327	p.E110in_frame_del	1.000:1.000:1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	123	0	0.00	100	45	31.03	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130833950	130833950	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	130833950	130833950	A	G	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	missense	c.901	p.K301E	0.999	pfam_PAZ,superfamily_PAZ,smart_PAZ,pfscan_PAZ	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	238	0	0.00	208	107	33.97	-	-	-
PJA1	0	genome.wustl.edu	37	X	68382828	68382828	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	68382828	68382828	G	A	SNP	PJA1	ENST00000361478	human	ensembl	69_37n	-1	known	missense	c.254	p.S85L	0.009	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA1	HGNC	ENSG00000181191	240	0	0.00	225	117	33.91	-	-	-
PKP1	0	genome.wustl.edu	37	1	201282534	201282534	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	201282534	201282534	C	T	SNP	PKP1	ENST00000263946	human	ensembl	69_37n	+1	known	missense	c.547	p.R183C	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP1	HGNC	ENSG00000081277	34	0	0.00	48	7	12.73	-	-	-
PKP1	0	genome.wustl.edu	37	1	201282535	201282535	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	201282535	201282535	G	A	SNP	PKP1	ENST00000263946	human	ensembl	69_37n	+1	known	missense	c.548	p.R183H	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP1	HGNC	ENSG00000081277	34	0	0.00	38	19	33.33	-	-	-
PLD1	0	genome.wustl.edu	37	3	171431831	171431831	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	171431831	171431831	A	G	SNP	PLD1	ENST00000351298	human	ensembl	69_37n	-1	known	silent	c.763	p.L255	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pirsf_PLipase_D_euk	pfam_Phox,pfam_PLipase_D/transphosphatidylase,pfam_Pleckstrin_homology,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD1	HGNC	ENSG00000075651	189	0	0.00	164	85	34.14	-	-	-
PLXNB2	0	genome.wustl.edu	37	22	50727190	50727190	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	50727190	50727190	G	A	SNP	PLXNB2	ENST00000359337	human	ensembl	69_37n	-1	known	silent	c.1362	p.Y454	0.997	superfamily_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB2	HGNC	ENSG00000196576	38	0	0.00	30	15	33.33	-	-	-
POC5	0	genome.wustl.edu	37	5	74973684	74973684	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	74973684	74973684	T	-	DEL	POC5	ENST00000428202	human	ensembl	69_37n	-1	known	frame_shift_del	c.1499	p.N500fs	0.001	NULL	NULL	-	no_errors	POC5	HGNC	ENSG00000152359	451	0	0.00	301	220	41.35	-	-	-
POLA1	0	genome.wustl.edu	37	X	24830822	24830822	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	24830822	24830822	T	C	SNP	POLA1	ENST00000379068	human	ensembl	69_37n	+1	known	silent	c.3138	p.I1046	0.983	pfam_DNA-dir_DNA_pol_B_multi_dom,tigrfam_DNA-dir_DNA_pol_B_pol2	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_Znf_DNA-dir_DNA_pol_B_alpha,pfam_DNA_pol_a_cat_su_N,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLA1	HGNC	ENSG00000101868	242	1	0.41	221	82	26.97	-	-	-
POLE	0	genome.wustl.edu	37	12	133220438	133220438	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	133220438	133220438	G	A	SNP	POLE	ENST00000455752	human	ensembl	69_37n	-1	known	silent	c.4308	p.G1436	0.455	NULL	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	150	0	0.00	155	47	23.27	-	-	-
POLR2B	0	genome.wustl.edu	37	4	57896449	57896452	+	Frame_Shift_Del	DEL	TTGT	TTGT	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	TTGT	TTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	57896449	57896452	TTGT	-	DEL	POLR2B	ENST00000314595	human	ensembl	69_37n	+1	known	frame_shift_del	c.3319_3322	p.F1108fs	0.436:0.999:1.000:1.000	pfam_RNA_pol_Rpb2_7	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR2B	HGNC	ENSG00000047315	326	0	0.00	240	109	30.88	-	-	-
POTEH	0	genome.wustl.edu	37	22	16287406	16287406	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	16287406	16287406	G	A	SNP	POTEH	ENST00000343518	human	ensembl	69_37n	-1	known	silent	c.480	p.Y160	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEH	HGNC	ENSG00000198062	379	1	0.26	438	90	17.01	-	-	-
PPAP2C	0	genome.wustl.edu	37	19	287568	287568	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	287568	287568	C	T	SNP	PPAP2C	ENST00000327790	human	ensembl	69_37n	-1	known	missense	c.451	p.V151I	0.992	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2C	HGNC	ENSG00000141934	37	0	0.00	44	6	12.00	-	-	-
PPIP5K1	0	genome.wustl.edu	37	15	43831723	43831723	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	43831723	43831723	A	G	SNP	PPIP5K1	ENST00000420765	human	ensembl	69_37n	-1	known	silent	c.3444	p.R1148	0.997	NULL	pfam_His_Pase_superF_clade-2,superfamily_MTCP1	-	no_errors	PPIP5K1	HGNC	ENSG00000168781	553	1	0.18	612	107	14.88	-	-	-
PRELP	0	genome.wustl.edu	37	1	203452615	203452615	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	203452615	203452615	G	A	SNP	PRELP	ENST00000343110	human	ensembl	69_37n	+1	known	silent	c.303	p.P101	0.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PRELP	HGNC	ENSG00000188783	196	0	0.00	159	85	34.00	-	-	-
PRKD3	0	genome.wustl.edu	37	2	37507071	37507071	+	Silent	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	37507071	37507071	T	C	SNP	PRKD3	ENST00000234179	human	ensembl	69_37n	-1	known	silent	c.990	p.E330	0.992	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825	146	1	0.67	136	86	38.22	-	-	-
PRRG3	0	genome.wustl.edu	37	X	150869297	150869297	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	150869297	150869297	G	-	DEL	PRRG3	ENST00000370353	human	ensembl	69_37n	+1	known	frame_shift_del	c.488	p.G165fs	0.000	NULL	pfam_GLA_domain,superfamily_GLA_domain,smart_GLA_domain,prints_GLA_domain,pfscan_GLA_domain	-	no_errors	PRRG3	HGNC	ENSG00000130032	18	0	0.00	24	10	29.41	-	-	-
PRSS8	0	genome.wustl.edu	37	16	31143790	31143790	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	31143790	31143790	A	C	SNP	PRSS8	ENST00000317508	human	ensembl	69_37n	-1	known	missense	c.665	p.V222G	1.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	-	no_errors	PRSS8	HGNC	ENSG00000052344	86	0	0.00	66	43	39.45	-	-	-
PRUNE2	0	genome.wustl.edu	37	9	79319782	79319782	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	79319782	79319782	G	A	SNP	PRUNE2	ENST00000428286	human	ensembl	69_37n	-1	known	missense	c.6331	p.P2111S	0.001	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772	168	0	0.00	101	60	37.27	-	-	-
PTENP1	0	genome.wustl.edu	37	9	33675365	33675365	+	RNA	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	33675365	33675365	A	-	DEL	PTENP1	ENST00000532280	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	27	0	0.00	17	6	26.09	-	-	-
PTPRF	0	genome.wustl.edu	37	1	44069494	44069494	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	44069494	44069494	C	T	SNP	PTPRF	ENST00000359947	human	ensembl	69_37n	+1	known	missense	c.2671	p.R891W	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC	ENSG00000142949	24	0	0.00	19	16	44.44	-	-	-
PUS7	0	genome.wustl.edu	37	7	105148864	105148864	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	105148864	105148864	T	-	DEL	PUS7	ENST00000356362	human	ensembl	69_37n	-1	known	frame_shift_del	c.96	p.K32fs	0.986	pirsf_PsdUridine_synth_TruD_euk	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	-	no_errors	PUS7	HGNC	ENSG00000091127	437	0	0.00	339	180	34.16	-	-	-
QRICH2	0	genome.wustl.edu	37	17	74278024	74278024	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	74278024	74278024	C	T	SNP	QRICH2	ENST00000262765	human	ensembl	69_37n	-1	known	missense	c.3686	p.R1229Q	0.890	NULL	NULL	-	no_errors	QRICH2	HGNC	ENSG00000129646	40	0	0.00	35	7	16.67	-	-	-
R3HDM4	0	genome.wustl.edu	37	19	900926	900926	+	Silent	SNP	G	G	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	900926	900926	G	T	SNP	R3HDM4	ENST00000361574	human	ensembl	69_37n	-1	known	silent	c.378	p.S126	0.267	NULL	pfscan_R3H_ss-bd	-	no_errors	R3HDM4	HGNC	ENSG00000198858	22	0	0.00	16	8	33.33	-	-	-
RAB11A	0	genome.wustl.edu	37	15	66180167	66180167	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	66180167	66180167	C	T	SNP	RAB11A	ENST00000261890	human	ensembl	69_37n	+1	known	nonsense	c.640	p.Q214*	1.000	smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB11A	HGNC	ENSG00000103769	166	0	0.00	142	36	20.22	-	-	-
RAD9A	0	genome.wustl.edu	37	11	67163284	67163286	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	67163284	67163286	GAG	-	DEL	RAD9A	ENST00000307980	human	ensembl	69_37n	+1	known	in_frame_del	c.547_549	p.E185in_frame_del	1.000:1.000:0.998	pfam_Rad9,pirsf_Cell_cycle_RAD9	pfam_Rad9,pirsf_Cell_cycle_RAD9	-	no_errors	RAD9A	HGNC	ENSG00000172613	35	0	0.00	31	6	16.22	-	-	-
RFX6	0	genome.wustl.edu	37	6	117248313	117248313	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	117248313	117248313	C	A	SNP	RFX6	ENST00000332958	human	ensembl	69_37n	+1	known	missense	c.2009	p.P670Q	0.126	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX6	HGNC	ENSG00000185002	193	0	0.00	74	25	25.25	-	-	-
RHOT1	0	genome.wustl.edu	37	17	30521111	30521111	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	30521111	30521111	A	G	SNP	RHOT1	ENST00000358365	human	ensembl	69_37n	+1	known	missense	c.854	p.E285G	1.000	pfam_EF_hand_assoc_2,pirsf_Small_GTPase_Miro	pfam_MIRO-like,pfam_EF_hand_assoc_2,pfam_EF_hand_assoc_1,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_EF_hand_Ca-bd,pirsf_Small_GTPase_Miro,pfscan_EF_HAND_2,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOT1	HGNC	ENSG00000126858	697	1	0.14	606	320	34.56	-	-	-
RIN2	0	genome.wustl.edu	37	20	19915793	19915793	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	20	19915793	19915793	G	A	SNP	RIN2	ENST00000255006	human	ensembl	69_37n	+1	known	silent	c.255	p.V85	1.000	NULL	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC	ENSG00000132669	185	0	0.00	147	78	34.67	-	-	-
RNF113B	0	genome.wustl.edu	37	13	98828674	98828674	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	13	98828674	98828674	G	A	SNP	RNF113B	ENST00000267291	human	ensembl	69_37n	-1	known	missense	c.817	p.H273Y	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_CCCH,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF113B	HGNC	ENSG00000139797	173	0	0.00	142	81	36.32	-	-	-
RP1L1	0	genome.wustl.edu	37	8	10470757	10470757	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	10470757	10470757	G	-	DEL	RP1L1	ENST00000382483	human	ensembl	69_37n	-1	known	frame_shift_del	c.851	p.P284fs	0.000	NULL	pfam_Doublecortin_dom,superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	20	0	0.00	23	10	30.30	-	-	-
RPGR	0	genome.wustl.edu	37	X	38145271	38145272	+	In_Frame_Ins	INS	-	-	CCC			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	38145271	38145272	-	CCC	INS	RPGR	ENST00000378505	human	ensembl	69_37n	-1	known	in_frame_ins	c.2981_2980	p.994in_frame_insG	0.060:0.135	NULL	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313	54	0	0.00	29	4	12.12	-	-	-
RPLP0P2	0	genome.wustl.edu	37	11	61404625	61404625	+	RNA	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	61404625	61404625	G	A	SNP	RPLP0P2	ENST00000496593	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742	81	0	0.00	69	39	36.11	-	-	-
RPS5	0	genome.wustl.edu	37	19	58904783	58904783	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	58904783	58904783	A	G	SNP	RPS5	ENST00000196551	human	ensembl	69_37n	+1	known	missense	c.376	p.T126A	0.992	pfam_Ribosomal_S7_dom,superfamily_Ribosomal_S7_dom,tigrfam_Ribosomal_S5/S7_euk/arc	pfam_Ribosomal_S7_dom,superfamily_Ribosomal_S7_dom,tigrfam_Ribosomal_S5/S7_euk/arc	-	no_errors	RPS5	HGNC	ENSG00000083845	41	0	0.00	37	6	13.64	-	-	-
RTTN	0	genome.wustl.edu	37	18	67698148	67698148	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	18	67698148	67698148	C	A	SNP	RTTN	ENST00000255674	human	ensembl	69_37n	-1	known	missense	c.5611	p.A1871S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	272	0	0.00	207	99	32.35	-	-	-
RWDD2A	0	genome.wustl.edu	37	6	83904358	83904358	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	83904358	83904358	T	C	SNP	RWDD2A	ENST00000369724	human	ensembl	69_37n	+1	known	missense	c.188	p.I63T	1.000	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pirsf_UCP038021_RWD,pfscan_RWD-domain	pfam_DUF1115,pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pirsf_UCP038021_RWD,pfscan_RWD-domain	-	no_errors	RWDD2A	HGNC	ENSG00000013392	119	0	0.00	176	23	11.56	-	-	-
SALL4	0	genome.wustl.edu	37	20	50400983	50400983	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	20	50400983	50400983	C	-	DEL	SALL4	ENST00000217086	human	ensembl	69_37n	-1	known	frame_shift_del	c.2983	p.V995fs	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL4	HGNC	ENSG00000101115	112	0	0.00	90	51	35.92	-	-	-
SAMD15	0	genome.wustl.edu	37	14	77845125	77845125	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	14	77845125	77845125	T	A	SNP	SAMD15	ENST00000216471	human	ensembl	69_37n	+1	known	missense	c.1364	p.F455Y	0.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD15	HGNC	ENSG00000100583	150	0	0.00	152	36	19.15	-	-	-
SBF1	0	genome.wustl.edu	37	22	50906253	50906253	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	50906253	50906253	C	T	SNP	SBF1	ENST00000380817	human	ensembl	69_37n	-1	known	missense	c.241	p.A81T	1.000	pfam_uDENN_dom,smart_uDENN_dom,pfscan_uDENN_dom	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotub-related,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241	35	0	0.00	21	14	37.84	-	-	-
SEC24B	0	genome.wustl.edu	37	4	110442315	110442315	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	110442315	110442315	A	G	SNP	SEC24B	ENST00000265175	human	ensembl	69_37n	+1	known	missense	c.2288	p.Y763C	0.995	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802	419	0	0.00	400	200	33.33	-	-	-
SEC24D	0	genome.wustl.edu	37	4	119745855	119745855	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	119745855	119745855	C	T	SNP	SEC24D	ENST00000379735	human	ensembl	69_37n	-1	known	missense	c.168	p.M56I	0.281	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24D	HGNC	ENSG00000150961	48	0	0.00	32	26	44.83	-	-	-
SETD1B	0	genome.wustl.edu	37	12	122242658	122242658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	122242658	122242658	C	-	DEL	SETD1B	ENST00000267197	human	ensembl	69_37n	+1	known	frame_shift_del	c.15	p.H8fs	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718	59	0	0.00	47	13	21.31	-	-	-
SETDB1	0	genome.wustl.edu	37	1	150917623	150917624	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	150917623	150917624	-	G	INS	SETDB1	ENST00000368962	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1179_1180	p.T396fs	0.000:0.000	NULL	smart_Tudor	-	no_errors	SETDB1	HGNC	ENSG00000143379	125	0	0.00	106	35	24.82	-	-	-
SGOL2	0	genome.wustl.edu	37	2	201438018	201438019	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	201438018	201438019	-	A	INS	SGOL2	ENST00000357799	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2949_2950	p.R985fs	0.140:0.133	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535	51	0	0.00	18	16	47.06	-	-	-
SH2B1	0	genome.wustl.edu	37	16	28884850	28884850	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	28884850	28884850	G	A	SNP	SH2B1	ENST00000569651	human	ensembl	69_37n	+1	putative	missense	c.457	p.V153I	0.991	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SH2B1	HGNC	ENSG00000178188	109	0	0.00	93	35	27.34	-	-	-
SH3BGRL	0	genome.wustl.edu	37	X	80457737	80457737	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	80457737	80457737	C	T	SNP	SH3BGRL	ENST00000373212	human	ensembl	69_37n	+1	known	missense	c.38	p.S13F	0.988	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	-	no_errors	SH3BGRL	HGNC	ENSG00000131171	249	0	0.00	222	96	30.19	-	-	-
SHD	0	genome.wustl.edu	37	19	4280122	4280122	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	4280122	4280122	C	A	SNP	SHD	ENST00000543264	human	ensembl	69_37n	+1	known	missense	c.62	p.P21H	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHD	HGNC	ENSG00000105251	30	0	0.00	16	11	40.74	-	-	-
SHMT2	0	genome.wustl.edu	37	12	57626239	57626239	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	57626239	57626239	A	-	DEL	SHMT2	ENST00000328923	human	ensembl	69_37n	+1	known	frame_shift_del	c.598	p.T201fs	0.008	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Ser_HO-MeTrfase	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Ser_HO-MeTrfase	-	no_errors	SHMT2	HGNC	ENSG00000182199	91	0	0.00	61	33	35.11	-	-	-
SLC18A3	0	genome.wustl.edu	37	10	50819070	50819070	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	50819070	50819070	C	T	SNP	SLC18A3	ENST00000374115	human	ensembl	69_37n	+1	known	missense	c.284	p.A95V	0.107	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714	22	0	0.00	14	5	26.32	-	-	-
SLC20A2	0	genome.wustl.edu	37	8	42295045	42295045	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	42295045	42295045	C	T	SNP	SLC20A2	ENST00000342228	human	ensembl	69_37n	-1	known	missense	c.985	p.G329S	1.000	pfam_Phos_transporter	pfam_Phos_transporter	-	no_errors	SLC20A2	HGNC	ENSG00000168575	70	0	0.00	60	40	40.00	-	-	-
SLC24A1	0	genome.wustl.edu	37	15	65918176	65918177	+	In_Frame_Ins	INS	-	-	CTG			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	65918176	65918177	-	CTG	INS	SLC24A1	ENST00000261892	human	ensembl	69_37n	+1	known	in_frame_ins	c.1758_1759	p.590in_frame_insL	1.000:1.000	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K-dep_Na/Ca-exchanger-like	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K-dep_Na/Ca-exchanger-like	-	no_errors	SLC24A1	HGNC	ENSG00000074621	304	0	0.00	331	70	17.46	-	-	-
SLC25A44	0	genome.wustl.edu	37	1	156180034	156180034	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	156180034	156180034	G	A	SNP	SLC25A44	ENST00000359511	human	ensembl	69_37n	+1	known	missense	c.757	p.E253K	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,prints_Mit_carrier,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,prints_Mit_carrier,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A44	HGNC	ENSG00000160785	289	0	0.00	219	157	41.76	-	-	-
SLC27A2	0	genome.wustl.edu	37	15	50526110	50526110	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	50526110	50526110	A	G	SNP	SLC27A2	ENST00000267842	human	ensembl	69_37n	+1	known	missense	c.1601	p.N534S	0.067	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A2	HGNC	ENSG00000140284	280	0	0.00	306	38	11.05	-	-	-
SLC27A4	0	genome.wustl.edu	37	9	131115028	131115028	+	Splice_Site	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	131115028	131115028	T	C	SNP	SLC27A4	ENST00000300456	human	ensembl	69_37n	+1	known	splice_site	c.987+2	e6+2	1.000	-	-	-	no_errors	SLC27A4	HGNC	ENSG00000167114	73	0	0.00	66	16	19.51	-	-	-
SLC2A9	0	genome.wustl.edu	37	4	9828107	9828107	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	9828107	9828107	C	T	SNP	SLC2A9	ENST00000264784	human	ensembl	69_37n	-1	known	missense	c.1537	p.A513T	0.979	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A9	HGNC	ENSG00000109667	354	1	0.28	209	113	35.09	-	-	-
SLC30A6	0	genome.wustl.edu	37	2	32396392	32396392	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	32396392	32396392	T	-	DEL	SLC30A6	ENST00000282587	human	ensembl	69_37n	+1	known	frame_shift_del	c.40	p.F15fs	1.000	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A6	HGNC	ENSG00000152683	395	1	0.25	543	66	10.80	-	-	-
SLC34A2	0	genome.wustl.edu	37	4	25675985	25675985	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	25675985	25675985	C	A	SNP	SLC34A2	ENST00000382051	human	ensembl	69_37n	+1	known	missense	c.1284	p.F428L	1.000	pfam_Na/Pi_transpt,superfamily_ABC_transptrTM_dom_typ1,tigrfam_Na/Pi_transpt	pfam_Na/Pi_transpt,superfamily_ABC_transptrTM_dom_typ1,tigrfam_Na/Pi_transpt	-	no_errors	SLC34A2	HGNC	ENSG00000157765	189	0	0.00	202	23	10.18	-	-	-
SLC9A1	0	genome.wustl.edu	37	1	27440699	27440699	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	27440699	27440699	C	-	DEL	SLC9A1	ENST00000263980	human	ensembl	69_37n	-1	known	frame_shift_del	c.431	p.G144fs	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_1,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A1	HGNC	ENSG00000090020	35	0	0.00	29	11	26.83	-	-	-
SLC9A7P1	0	genome.wustl.edu	37	12	98850411	98850412	+	RNA	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	98850411	98850412	-	G	INS	SLC9A7P1	ENST00000554295	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.990:0.994	-	-	-	no_errors	SLC9A7P1	HGNC	ENSG00000227825	53	0	0.00	73	11	13.10	-	-	-
SLCO1B1	0	genome.wustl.edu	37	12	21377736	21377736	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	21377736	21377736	C	T	SNP	SLCO1B1	ENST00000256958	human	ensembl	69_37n	+1	known	missense	c.1828	p.R610C	0.010	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal-type_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B1	HGNC	ENSG00000134538	425	0	0.00	239	190	44.29	-	-	-
SLTM	0	genome.wustl.edu	37	15	59182525	59182526	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	59182525	59182526	TC	-	DEL	SLTM	ENST00000380516	human	ensembl	69_37n	-1	known	frame_shift_del	c.2034_2033	p.R678fs	0.999:1.000	NULL	pfam_RRM_dom,pfam_SAP_DNA-bd,smart_SAP_DNA-bd,smart_RRM_dom,pfscan_SAP_DNA-bd,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776	247	0	0.00	228	27	10.51	-	-	-
SMC4	0	genome.wustl.edu	37	3	160131390	160131390	+	Silent	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	160131390	160131390	A	G	SNP	SMC4	ENST00000344722	human	ensembl	69_37n	+1	known	silent	c.1110	p.K370	1.000	pfam_RecF/RecN/SMC	pfam_RecF/RecN/SMC,pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810	195	0	0.00	159	71	30.87	-	-	-
SORBS1	0	genome.wustl.edu	37	10	97170460	97170460	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	97170460	97170460	G	A	SNP	SORBS1	ENST00000361941	human	ensembl	69_37n	-1	known	silent	c.885	p.S295	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS1	HGNC	ENSG00000095637	211	0	0.00	190	35	15.56	-	-	-
SOX15	0	genome.wustl.edu	37	17	7491760	7491760	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	7491760	7491760	G	-	DEL	SOX15	ENST00000250055	human	ensembl	69_37n	-1	known	frame_shift_del	c.638	p.P213fs	0.784	NULL	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	SOX15	HGNC	ENSG00000129194	193	0	0.00	81	117	57.92	-	-	-
SPDYC	0	genome.wustl.edu	37	11	64938932	64938932	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	64938932	64938932	G	A	SNP	SPDYC	ENST00000377185	human	ensembl	69_37n	+1	known	missense	c.161	p.R54H	0.000	NULL	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYC	HGNC	ENSG00000204710	63	0	0.00	38	24	38.71	-	-	-
SPEN	0	genome.wustl.edu	37	1	16259042	16259043	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	16259042	16259043	-	G	INS	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	frame_shift_ins	c.6307_6308	p.A2105fs	0.000:0.000	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	107	0	0.00	90	17	15.89	-	-	-
SQSTM1	0	genome.wustl.edu	37	5	179260660	179260660	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	5	179260660	179260660	C	T	SNP	SQSTM1	ENST00000389805	human	ensembl	69_37n	+1	known	missense	c.1043	p.P348L	1.000	NULL	pfam_Znf_ZZ,pfam_OPR_PB1,superfamily_UBA-like,smart_OPR_PB1,smart_Znf_ZZ,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_ZZ	-	no_errors	SQSTM1	HGNC	ENSG00000161011	104	1	0.95	79	58	42.34	-	-	-
SRGAP2	0	genome.wustl.edu	37	1	206611342	206611342	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	206611342	206611342	C	T	SNP	SRGAP2	ENST00000295713	human	ensembl	69_37n	+1	known	nonsense	c.1402	p.R468*	0.995	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_RhoGAP_dom,smart_SH3_domain,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SRGAP2	HGNC	ENSG00000163486	162	0	0.00	126	57	31.15	-	-	-
STUB1	0	genome.wustl.edu	37	16	731505	731507	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	731505	731507	GAA	-	DEL	STUB1	ENST00000219548	human	ensembl	69_37n	+1	known	in_frame_del	c.426_428	p.K145in_frame_del	1.000:1.000:1.000	NULL	pfam_Ubox_domain,pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,smart_Ubox_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	STUB1	HGNC	ENSG00000103266	14	0	0.00	11	6	35.29	-	-	-
SUPT6H	0	genome.wustl.edu	37	17	27027201	27027202	+	In_Frame_Ins	INS	-	-	AGC			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	27027201	27027202	-	AGC	INS	SUPT6H	ENST00000314616	human	ensembl	69_37n	+1	known	in_frame_ins	c.4572_4573	p.1528in_frame_insS	1.000:1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	96	0	0.00	111	26	18.98	-	-	-
TACC2	0	genome.wustl.edu	37	10	123844494	123844494	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	123844494	123844494	G	C	SNP	TACC2	ENST00000334433	human	ensembl	69_37n	+1	known	missense	c.2479	p.E827Q	0.000	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162	135	0	0.00	149	17	10.24	-	-	-
TAS2R10	0	genome.wustl.edu	37	12	10978282	10978282	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	10978282	10978282	A	-	DEL	TAS2R10	ENST00000240619	human	ensembl	69_37n	-1	known	frame_shift_del	c.587	p.L196fs	0.009	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R10	HGNC	ENSG00000121318	63	0	0.00	32	11	24.44	-	-	-
TBC1D10C	0	genome.wustl.edu	37	11	67171808	67171808	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	67171808	67171808	C	T	SNP	TBC1D10C	ENST00000312390	human	ensembl	69_37n	+1	known	silent	c.135	p.G45	0.999	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10C	HGNC	ENSG00000175463	19	0	0.00	8	6	42.86	-	-	-
TBC1D21	0	genome.wustl.edu	37	15	74177124	74177124	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	74177124	74177124	C	T	SNP	TBC1D21	ENST00000300504	human	ensembl	69_37n	+1	known	missense	c.370	p.R124C	0.003	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D21	HGNC	ENSG00000167139	60	0	0.00	33	26	44.07	-	-	-
TBCD	0	genome.wustl.edu	37	17	80895232	80895232	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	80895232	80895232	G	A	SNP	TBCD	ENST00000355528	human	ensembl	69_37n	+1	known	missense	c.3277	p.A1093T	0.003	superfamily_ARM-type_fold	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	-	no_errors	TBCD	HGNC	ENSG00000141556	103	0	0.00	103	36	25.71	-	-	-
TBX5	0	genome.wustl.edu	37	12	114804192	114804193	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	12	114804192	114804193	-	A	INS	TBX5	ENST00000310346	human	ensembl	69_37n	-1	known	frame_shift_ins	c.760_759	p.E253fs	1.000:1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225	53	0	0.00	34	4	10.53	-	-	-
TFE3	0	genome.wustl.edu	37	X	48887952	48887952	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	48887952	48887952	C	-	DEL	TFE3	ENST00000315869	human	ensembl	69_37n	-1	known	frame_shift_del	c.1445	p.G482fs	0.037	pfam_bHLH_ZIP_TF_MiT/TFE	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	TFE3	HGNC	ENSG00000068323	56	0	0.00	45	9	16.36	-	-	-
THBS1	0	genome.wustl.edu	37	15	39885373	39885373	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	39885373	39885373	C	T	SNP	THBS1	ENST00000260356	human	ensembl	69_37n	+1	known	silent	c.2940	p.R980	0.977	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801	39	0	0.00	42	25	37.31	-	-	-
TIRAP	0	genome.wustl.edu	37	11	126162826	126162826	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	11	126162826	126162826	C	T	SNP	TIRAP	ENST00000392678	human	ensembl	69_37n	+1	known	silent	c.522	p.C174	1.000	superfamily_TIR_dom,pirsf_Tol-interleuk_rcpt_adapt_Tirap	pfam_TIR_dom,superfamily_TIR_dom,pirsf_Tol-interleuk_rcpt_adapt_Tirap,pfscan_TIR_dom	-	no_errors	TIRAP	HGNC	ENSG00000150455	61	0	0.00	52	9	14.52	-	-	-
TLR9	0	genome.wustl.edu	37	3	52257017	52257017	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	52257017	52257017	C	-	DEL	TLR9	ENST00000360658	human	ensembl	69_37n	-1	known	frame_shift_del	c.1315	p.E439fs	0.133	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_TIR_dom,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR9	HGNC	ENSG00000239732	12	0	0.00	9	9	50.00	-	-	-
TM2D3	0	genome.wustl.edu	37	15	102182699	102182699	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	102182699	102182699	C	A	SNP	TM2D3	ENST00000333202	human	ensembl	69_37n	-1	known	missense	c.727	p.G243C	1.000	NULL	pfam_TM2	-	no_errors	TM2D3	HGNC	ENSG00000184277	89	0	0.00	67	45	40.18	-	-	-
TMEM74	0	genome.wustl.edu	37	8	109796495	109796495	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	109796495	109796495	A	G	SNP	TMEM74	ENST00000297459	human	ensembl	69_37n	-1	known	missense	c.833	p.F278S	1.000	NULL	NULL	-	no_errors	TMEM74	HGNC	ENSG00000164841	201	0	0.00	152	78	33.91	-	-	-
TMPRSS11F	0	genome.wustl.edu	37	4	68925078	68925078	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	68925078	68925078	G	A	SNP	TMPRSS11F	ENST00000356291	human	ensembl	69_37n	-1	known	missense	c.1124	p.A375V	1.000	pirsf_Pept_S1A_HAT/DESC1,pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pirsf_Pept_S1A_HAT/DESC1,pfam_Peptidase_S1_S6,pfam_SEA,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_SEA,pfscan_Peptidase_S1_S6	-	no_errors	TMPRSS11F	HGNC	ENSG00000198092	560	0	0.00	541	83	13.30	-	-	-
TNKS2	0	genome.wustl.edu	37	10	93601946	93601946	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	93601946	93601946	A	-	DEL	TNKS2	ENST00000371627	human	ensembl	69_37n	+1	known	frame_shift_del	c.1857	p.N622fs	0.997	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854	194	0	0.00	124	67	34.72	-	-	-
TNS4	0	genome.wustl.edu	37	17	38643488	38643488	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	17	38643488	38643488	G	-	DEL	TNS4	ENST00000254051	human	ensembl	69_37n	-1	known	frame_shift_del	c.1088	p.P363fs	1.000	NULL	pfam_PTB,pfam_SH2,smart_SH2,smart_PTyr_interaction_dom,pfscan_SH2	-	no_errors	TNS4	HGNC	ENSG00000131746	483	0	0.00	431	77	15.07	-	-	-
TNXB	0	genome.wustl.edu	37	6	32049423	32049424	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	32049423	32049424	-	G	INS	TNXB	ENST00000375247	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3764_3763	p.R1255fs	0.000:0.009	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	14	0	0.00	22	6	21.43	-	-	-
TOP3B	0	genome.wustl.edu	37	22	22326278	22326278	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	22	22326278	22326278	C	T	SNP	TOP3B	ENST00000357179	human	ensembl	69_37n	-1	known	missense	c.355	p.D119N	1.000	pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,prints_Topo_IA	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038	103	0	0.00	36	57	61.29	-	-	-
TPO	0	genome.wustl.edu	37	2	1440158	1440158	+	Splice_Site	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	1440158	1440158	T	C	SNP	TPO	ENST00000329066	human	ensembl	69_37n	+1	known	splice_site	c.482+2	e4+2	0.997	-	-	-	no_errors	TPO	HGNC	ENSG00000115705	194	1	0.51	271	33	10.82	-	-	-
TRAF7	0	genome.wustl.edu	37	16	2220730	2220730	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	2220730	2220730	C	T	SNP	TRAF7	ENST00000326181	human	ensembl	69_37n	+1	known	missense	c.347	p.P116L	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653	26	0	0.00	23	14	37.84	-	-	-
TRIM32	0	genome.wustl.edu	37	9	119460577	119460577	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	119460577	119460577	C	T	SNP	TRIM32	ENST00000373983	human	ensembl	69_37n	+1	known	nonsense	c.556	p.Q186*	1.000	NULL	pfam_NHL_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM32	HGNC	ENSG00000119401	71	0	0.00	55	38	40.86	-	-	-
TRIM50	0	genome.wustl.edu	37	7	72730631	72730632	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	72730631	72730632	-	T	INS	TRIM50	ENST00000333149	human	ensembl	69_37n	-1	known	frame_shift_ins	c.807_806	p.P270fs	1.000:1.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM50	HGNC	ENSG00000146755	73	0	0.00	92	14	13.21	-	-	-
TRO	0	genome.wustl.edu	37	X	54956207	54956207	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	54956207	54956207	T	C	SNP	TRO	ENST00000173898	human	ensembl	69_37n	+1	known	missense	c.3050	p.V1017A	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	TRO	HGNC	ENSG00000067445	74	0	0.00	68	9	11.69	-	-	-
TTN	0	genome.wustl.edu	37	2	179430671	179430671	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	2	179430671	179430671	A	G	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.72484	p.Y24162H	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	339	0	0.00	138	68	33.01	-	-	-
TUBB4A	0	genome.wustl.edu	37	19	6495769	6495769	+	Silent	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	19	6495769	6495769	G	A	SNP	TUBB4A	ENST00000264071	human	ensembl	69_37n	-1	known	silent	c.741	p.N247	1.000	superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Alpha_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin	-	no_errors	TUBB4A	HGNC	ENSG00000104833	54	0	0.00	26	23	46.00	-	-	-
UBE3C	0	genome.wustl.edu	37	7	157009636	157009636	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	157009636	157009636	T	C	SNP	UBE3C	ENST00000348165	human	ensembl	69_37n	+1	known	missense	c.1885	p.S629P	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_DHFR-like_dom,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3C	HGNC	ENSG00000009335	159	0	0.00	217	32	12.75	-	-	-
UGT2B4	0	genome.wustl.edu	37	4	70350946	70350946	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	4	70350946	70350946	C	T	SNP	UGT2B4	ENST00000305107	human	ensembl	69_37n	-1	known	silent	c.1290	p.K430	0.211	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B4	HGNC	ENSG00000156096	404	0	0.00	290	163	35.98	-	-	-
USP16	0	genome.wustl.edu	37	21	30411428	30411428	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	21	30411428	30411428	A	-	DEL	USP16	ENST00000334352	human	ensembl	69_37n	+1	known	frame_shift_del	c.814	p.K273fs	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19	-	no_errors	USP16	HGNC	ENSG00000156256	188	0	0.00	143	70	32.11	-	-	-
VPS4A	0	genome.wustl.edu	37	16	69358203	69358204	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	69358203	69358204	AG	-	DEL	VPS4A	ENST00000254950	human	ensembl	69_37n	+1	known	frame_shift_del	c.1305_1306	p.S437fs	1.000:1.000	NULL	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612	109	0	0.00	91	41	30.60	-	-	-
VPS52	0	genome.wustl.edu	37	6	33235071	33235071	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	6	33235071	33235071	C	T	SNP	VPS52	ENST00000445902	human	ensembl	69_37n	-1	known	missense	c.1019	p.S340N	1.000	pfam_Vps52	pfam_Vps52,pfam_Exocyst_Exoc1	-	no_errors	VPS52	HGNC	ENSG00000223501	134	0	0.00	154	26	14.44	-	-	-
VWA5B2	0	genome.wustl.edu	37	3	183954187	183954187	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	183954187	183954187	C	T	SNP	VWA5B2	ENST00000426955	human	ensembl	69_37n	+1	known	silent	c.1269	p.P423	0.008	NULL	NULL	-	no_errors	VWA5B2	HGNC	ENSG00000145198	34	0	0.00	28	22	44.00	-	-	-
WDR6	0	genome.wustl.edu	37	3	49049490	49049490	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	3	49049490	49049490	A	G	SNP	WDR6	ENST00000395474	human	ensembl	69_37n	+1	known	missense	c.613	p.I205V	0.765	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR6	HGNC	ENSG00000178252	37	0	0.00	15	17	53.12	-	-	-
WDR72	0	genome.wustl.edu	37	15	54025194	54025194	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	15	54025194	54025194	C	T	SNP	WDR72	ENST00000360509	human	ensembl	69_37n	-1	known	silent	c.153	p.K51	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415	156	0	0.00	90	52	36.62	-	-	-
WISP1	0	genome.wustl.edu	37	8	134237699	134237699	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	134237699	134237699	G	A	SNP	WISP1	ENST00000250160	human	ensembl	69_37n	+1	known	missense	c.677	p.C226Y	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pirsf_IGFBP_CNN,pfscan_Thrombospondin_1_rpt	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415	45	0	0.00	26	19	41.30	-	-	-
WNK2	0	genome.wustl.edu	37	9	96060333	96060333	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	96060333	96060333	C	T	SNP	WNK2	ENST00000453718	human	ensembl	69_37n	+1	putative	missense	c.1472	p.S491L	1.000	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	WNK2	HGNC	ENSG00000165238	9	0	0.00	9	11	55.00	-	-	-
XPO7	0	genome.wustl.edu	37	8	21844747	21844747	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	8	21844747	21844747	G	A	SNP	XPO7	ENST00000434536	human	ensembl	69_37n	+1	known	missense	c.1700	p.R567H	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO7	HGNC	ENSG00000130227	147	0	0.00	192	26	11.93	-	-	-
ZC4H2	0	genome.wustl.edu	37	X	64137672	64137672	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	64137672	64137672	C	T	SNP	ZC4H2	ENST00000447788	human	ensembl	69_37n	-1	known	missense	c.503	p.R168K	0.508	NULL	pfam_Znf-C4H2	-	no_errors	ZC4H2	HGNC	ENSG00000126970	293	0	0.00	174	100	36.50	-	-	-
ZCCHC6	0	genome.wustl.edu	37	9	88938113	88938113	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	9	88938113	88938113	T	C	SNP	ZCCHC6	ENST00000375963	human	ensembl	69_37n	-1	known	missense	c.2552	p.D851G	0.871	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223	172	0	0.00	105	42	28.57	-	-	-
ZDHHC16	0	genome.wustl.edu	37	10	99211936	99211936	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	10	99211936	99211936	A	G	SNP	ZDHHC16	ENST00000420089	human	ensembl	69_37n	+1	known	missense	c.260	p.Q87R	0.178	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZDHHC16	HGNC	ENSG00000171307	170	0	0.00	154	61	28.24	-	-	-
ZMYM3	0	genome.wustl.edu	37	X	70472854	70472854	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	70472854	70472854	C	-	DEL	ZMYM3	ENST00000373988	human	ensembl	69_37n	-1	known	frame_shift_del	c.252	p.L85fs	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH	-	no_errors	ZMYM3	HGNC	ENSG00000147130	30	0	0.00	30	15	31.91	-	-	-
ZNF282	0	genome.wustl.edu	37	7	148921569	148921569	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	148921569	148921569	A	G	SNP	ZNF282	ENST00000262085	human	ensembl	69_37n	+1	known	missense	c.1846	p.N616D	0.957	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF282	HGNC	ENSG00000170265	29	0	0.00	33	22	40.00	-	-	-
ZNF362	0	genome.wustl.edu	37	1	33745989	33745989	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	33745989	33745989	C	T	SNP	ZNF362	ENST00000373428	human	ensembl	69_37n	+1	known	missense	c.614	p.P205L	0.994	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF362	HGNC	ENSG00000160094	18	0	0.00	19	13	40.62	-	-	-
ZNF645	0	genome.wustl.edu	37	X	22292144	22292144	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	X	22292144	22292144	C	T	SNP	ZNF645	ENST00000323684	human	ensembl	69_37n	+1	known	nonsense	c.1036	p.Q346*	0.910	NULL	pfscan_Znf_RING,pfscan_Znf_C2H2	-	no_errors	ZNF645	HGNC	ENSG00000175809	230	0	0.00	244	45	15.46	-	-	-
ZNF687	0	genome.wustl.edu	37	1	151261079	151261079	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	1	151261079	151261079	C	-	DEL	ZNF687	ENST00000324048	human	ensembl	69_37n	+1	known	frame_shift_del	c.2191	p.H733fs	0.430	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373	65	0	0.00	71	10	12.20	-	-	-
ZNF785	0	genome.wustl.edu	37	16	30594700	30594700	+	Silent	SNP	C	C	T			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	16	30594700	30594700	C	T	SNP	ZNF785	ENST00000395216	human	ensembl	69_37n	-1	known	silent	c.399	p.A133	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF785	HGNC	ENSG00000197162	52	0	0.00	37	30	44.78	-	-	-
ZNF786	0	genome.wustl.edu	37	7	148769157	148769157	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HA-01A-11D-A12Q-09	TCGA-BH-A0HA-11A-31D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	95f2ee35-a485-4995-8205-01623d97da2d	eb1421a0-3424-4a55-be66-9bea2d867c12	7	148769157	148769157	A	G	SNP	ZNF786	ENST00000491431	human	ensembl	69_37n	-1	known	missense	c.707	p.V236A	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF786	HGNC	ENSG00000197362	31	0	0.00	24	15	35.71	-	-	-
