Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ATXN1	0	genome.wustl.edu	37	6	16327705	16327705	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	6	16327705	16327705	G	C	SNP	ATXN1	ENST00000244769	human	ensembl	69_37n	-1	known	missense	c.837	p.H279Q	1.000	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788	56	0	0.00	18	12	40.00	-	-	-
CES2	0	genome.wustl.edu	37	16	66974233	66974233	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	16	66974233	66974233	C	T	SNP	CES2	ENST00000317091	human	ensembl	69_37n	+1	known	missense	c.724	p.R242C	1.000	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES2	HGNC	ENSG00000172831	406	0	0.00	131	153	53.68	-	-	-
DNAJC13	0	genome.wustl.edu	37	3	132166751	132166751	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	3	132166751	132166751	A	G	SNP	DNAJC13	ENST00000260818	human	ensembl	69_37n	+1	known	missense	c.304	p.T102A	1.000	NULL	pfam_DnaJ_N,superfamily_ARM-type_fold,superfamily_GYF,smart_DnaJ_N,pfscan_DnaJ_N	-	no_errors	DNAJC13	HGNC	ENSG00000138246	210	0	0.00	191	85	30.58	-	-	-
EPPK1	0	genome.wustl.edu	37	8	144945136	144945136	+	Silent	SNP	G	G	A			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	8	144945136	144945136	G	A	SNP	EPPK1	ENST00000525985	human	ensembl	69_37n	-1	known	silent	c.2286	p.D762	0.975	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	117	0	0.00	173	34	16.43	-	-	-
GDF2	0	genome.wustl.edu	37	10	48413719	48413719	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	10	48413719	48413719	C	A	SNP	GDF2	ENST00000249598	human	ensembl	69_37n	-1	known	missense	c.1149	p.K383N	0.999	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF2	HGNC	ENSG00000128802	98	0	0.00	32	42	56.76	-	-	-
MAPK6	0	genome.wustl.edu	37	15	52350913	52350913	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	15	52350913	52350913	G	C	SNP	MAPK6	ENST00000261845	human	ensembl	69_37n	+1	known	missense	c.784	p.V262L	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_MAPK_ERK3/4	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK6	HGNC	ENSG00000069956	83	0	0.00	95	18	15.93	-	-	-
MON2	0	genome.wustl.edu	37	12	62965209	62965209	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	12	62965209	62965209	C	G	SNP	MON2	ENST00000393630	human	ensembl	69_37n	+1	known	missense	c.4364	p.P1455R	1.000	superfamily_ARM-type_fold	pfam_DUF1981_SEC7_assoc,superfamily_ARM-type_fold	-	no_errors	MON2	HGNC	ENSG00000061987	126	0	0.00	72	50	40.65	-	-	-
MOV10	0	genome.wustl.edu	37	1	113231673	113231673	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	1	113231673	113231673	T	G	SNP	MOV10	ENST00000357443	human	ensembl	69_37n	+1	known	missense	c.254	p.V85G	0.004	NULL	NULL	-	no_errors	MOV10	HGNC	ENSG00000155363	132	0	0.00	106	37	25.69	-	-	-
MSR1	0	genome.wustl.edu	37	8	16035439	16035439	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	8	16035439	16035439	G	T	SNP	MSR1	ENST00000262101	human	ensembl	69_37n	-1	known	missense	c.59	p.S20Y	0.999	prints_Macro_scav_rcpt	pfam_Srcr_rcpt,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	MSR1	HGNC	ENSG00000038945	85	0	0.00	189	121	39.03	-	-	-
NKX2-8	0	genome.wustl.edu	37	14	37051569	37051569	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	14	37051569	37051569	A	-	DEL	NKX2-8	ENST00000258829	human	ensembl	69_37n	-1	known	frame_shift_del	c.26	p.F9fs	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	NKX2-8	HGNC	ENSG00000136327	33	0	0.00	9	2	18.18	-	-	-
OFD1	0	genome.wustl.edu	37	X	13781897	13781897	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	X	13781897	13781897	G	T	SNP	OFD1	ENST00000340096	human	ensembl	69_37n	+1	known	missense	c.2522	p.G841V	0.002	NULL	superfamily_Lipoprotein_6,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	OFD1	HGNC	ENSG00000046651	138	0	0.00	133	22	14.19	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178922325	178922325	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	3	178922325	178922325	A	T	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1094	p.E365V	1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	204	0	0.00	214	78	26.62	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	92	0	0.00	90	31	25.62	-	-	-
PLLP	0	genome.wustl.edu	37	16	57290919	57290921	+	In_Frame_Del	DEL	ATC	ATC	-			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	ATC	ATC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	16	57290919	57290921	ATC	-	DEL	PLLP	ENST00000219207	human	ensembl	69_37n	-1	known	in_frame_del	c.455_453	p.M151in_frame_del	0.997:1.000:1.000	pfam_MARVEL-like_dom,prints_MAL	pfam_MARVEL-like_dom,prints_MAL	-	no_errors	PLLP	HGNC	ENSG00000102934	53	0	0.00	36	4	10.00	-	-	-
PLXNA1	0	genome.wustl.edu	37	3	126730837	126730837	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	3	126730837	126730837	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	69_37n	+1	known	missense	c.2149	p.V717M	0.998	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semaphorin/CD100_Ag,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNA1	HGNC	ENSG00000114554	44	0	0.00	24	9	27.27	-	-	-
POLA2	0	genome.wustl.edu	37	11	65064614	65064614	+	Silent	SNP	G	G	A			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	11	65064614	65064614	G	A	SNP	POLA2	ENST00000265465	human	ensembl	69_37n	+1	known	silent	c.1671	p.V557	1.000	pirsf_DNA_pol_alpha_bsu	pfam_Pol_alpha_B_N,pfam_DNA_pol_alpha/epsilon_bsu,pirsf_DNA_pol_alpha_bsu	-	no_errors	POLA2	HGNC	ENSG00000014138	82	0	0.00	60	39	39.39	-	-	-
PPIL4	0	genome.wustl.edu	37	6	149847870	149847870	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	6	149847870	149847870	C	T	SNP	PPIL4	ENST00000253329	human	ensembl	69_37n	-1	known	missense	c.721	p.V241I	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_Cyclophilin-like_PPIase_dom,pfam_RRM_dom,superfamily_Cyclophilin-like_PPIase_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL4	HGNC	ENSG00000131013	161	0	0.00	167	40	19.32	-	-	-
PPM1F	0	genome.wustl.edu	37	22	22277563	22277563	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	22	22277563	22277563	C	T	SNP	PPM1F	ENST00000263212	human	ensembl	69_37n	-1	known	missense	c.1267	p.G423R	0.000	NULL	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1F	HGNC	ENSG00000100034	21	0	0.00	13	12	48.00	-	-	-
PRICKLE3	0	genome.wustl.edu	37	X	49040116	49040117	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	X	49040116	49040117	GT	-	DEL	PRICKLE3	ENST00000536904	human	ensembl	69_37n	-1	known	frame_shift_del	c.179_178	p.T60fs	0.149:0.119	NULL	pfam_Znf_LIM,pfam_PET_domain,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE3	HGNC	ENSG00000012211	23	0	0.00	12	3	20.00	-	-	-
RB1	0	genome.wustl.edu	37	13	48934189	48934189	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	13	48934189	48934189	C	A	SNP	RB1	ENST00000267163	human	ensembl	69_37n	+1	known	nonsense	c.644	p.S215*	1.000	pfam_DUF3452_retinoblatoma-assoc	pfam_Rb_C,pfam_RB_A,pfam_RB_B,pfam_DUF3452_retinoblatoma-assoc,superfamily_Cyclin-like,superfamily_FH2_actin-bd,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687	110	0	0.00	41	37	47.44	-	-	-
RFX4	0	genome.wustl.edu	37	12	107080750	107080750	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	12	107080750	107080750	A	C	SNP	RFX4	ENST00000357881	human	ensembl	69_37n	+1	known	missense	c.493	p.T165P	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX4	HGNC	ENSG00000111783	106	0	0.00	81	18	18.18	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36206776	36206777	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	21	36206776	36206777	-	G	INS	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	frame_shift_ins	c.736_735	p.T245fs	1.000:1.000	pirsf_TF_Runt-rel_RUNX	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	175	0	0.00	95	36	27.48	-	-	-
SMG5	0	genome.wustl.edu	37	1	156237972	156237972	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	1	156237972	156237972	C	T	SNP	SMG5	ENST00000361813	human	ensembl	69_37n	-1	known	missense	c.842	p.C281Y	1.000	NULL	pfam_EST1,smart_PINc_nuc-bd	-	no_errors	SMG5	HGNC	ENSG00000198952	190	1	0.52	214	160	42.78	-	-	-
SYNPR	0	genome.wustl.edu	37	3	63594947	63594947	+	Silent	SNP	C	C	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	3	63594947	63594947	C	T	SNP	SYNPR	ENST00000478300	human	ensembl	69_37n	+1	known	silent	c.555	p.C185	1.000	pfam_MARVEL-like_dom	pfam_MARVEL-like_dom,prints_Synaptophysin/porin	-	no_errors	SYNPR	HGNC	ENSG00000163630	267	0	0.00	253	139	35.46	-	-	-
TAS2R38	0	genome.wustl.edu	37	7	141673070	141673070	+	Silent	SNP	G	G	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	7	141673070	141673070	G	T	SNP	TAS2R38	ENST00000547270	human	ensembl	69_37n	-1	known	silent	c.420	p.I140	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R38	HGNC	ENSG00000257138	60	0	0.00	44	7	13.73	-	-	-
TP53	0	genome.wustl.edu	37	17	7578212	7578212	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	17	7578212	7578212	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.637	p.R213*	0.893	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	172	0	0.00	55	53	49.07	-	-	-
USH2A	0	genome.wustl.edu	37	1	216219877	216219877	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	1	216219877	216219877	G	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.6221	p.S2074Y	0.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	134	0	0.00	206	41	16.60	-	-	-
ZNF224	0	genome.wustl.edu	37	19	44612139	44612139	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A202-01A-11D-A14K-09	TCGA-BH-A202-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6feb69a-8827-4d43-94aa-036cf5150549	4cdd2f93-e0d1-4420-bf4d-ba004cc0599c	19	44612139	44612139	C	T	SNP	ZNF224	ENST00000336976	human	ensembl	69_37n	+1	known	missense	c.1826	p.S609L	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF224	HGNC	ENSG00000267680	73	0	0.00	62	44	41.51	-	-	-
