Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACSM5	0	genome.wustl.edu	37	16	20442562	20442562	+	Silent	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	16	20442562	20442562	C	T	SNP	ACSM5	ENST00000331849	human	ensembl	69_37n	+1	known	silent	c.1227	p.N409	0.043	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM5	HGNC	ENSG00000183549	30	0	0.00	63	7	10.00	-	-	-
ARID4B	0	genome.wustl.edu	37	1	235345310	235345310	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	1	235345310	235345310	T	C	SNP	ARID4B	ENST00000264183	human	ensembl	69_37n	-1	known	missense	c.2924	p.E975G	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267	75	0	0.00	74	58	43.94	-	-	-
CCDC18	0	genome.wustl.edu	37	1	93698055	93698055	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	1	93698055	93698055	C	A	SNP	CCDC18	ENST00000557479	human	ensembl	69_37n	+1	known	missense	c.2719	p.L907I	0.554	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483	23	0	0.00	26	4	13.33	-	-	-
CCDC97	0	genome.wustl.edu	37	19	41822503	41822503	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	19	41822503	41822503	G	T	SNP	CCDC97	ENST00000269967	human	ensembl	69_37n	+1	known	missense	c.261	p.L87F	0.998	NULL	pfam_DUF2052_coiled-coil	-	no_errors	CCDC97	HGNC	ENSG00000142039	10	0	0.00	19	9	32.14	-	-	-
CDYL	0	genome.wustl.edu	37	6	4943862	4943862	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	6	4943862	4943862	A	G	SNP	CDYL	ENST00000328908	human	ensembl	69_37n	+1	known	missense	c.1366	p.I456V	1.000	pfam_Crotonase_core	pfam_Crotonase_core,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046	37	0	0.00	32	17	34.69	-	-	-
FER	0	genome.wustl.edu	37	5	108294990	108294990	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	5	108294990	108294990	C	A	SNP	FER	ENST00000281092	human	ensembl	69_37n	+1	known	missense	c.1598	p.T533K	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,smart_SH2,pfscan_SH2,prints_SH2	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_FCH,superfamily_Kinase-like_dom,smart_FCH,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FCH,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	FER	HGNC	ENSG00000151422	20	0	0.00	27	10	27.03	-	-	-
HECW2	0	genome.wustl.edu	37	2	197298078	197298078	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	2	197298078	197298078	T	A	SNP	HECW2	ENST00000260983	human	ensembl	69_37n	-1	known	missense	c.70	p.S24C	1.000	NULL	pfam_HECT,pfam_WW_Rsp5_WWP,pfam_C2_Ca-dep,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_C2_membr_targeting,pfscan_WW_Rsp5_WWP	-	no_errors	HECW2	HGNC	ENSG00000138411	39	0	0.00	35	18	33.96	-	-	-
HELB	0	genome.wustl.edu	37	12	66698653	66698653	+	Silent	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	12	66698653	66698653	G	A	SNP	HELB	ENST00000247815	human	ensembl	69_37n	+1	known	silent	c.330	p.P110	0.053	NULL	NULL	-	no_errors	HELB	HGNC	ENSG00000127311	46	0	0.00	41	13	24.07	-	-	-
IGF1R	0	genome.wustl.edu	37	15	99500587	99500587	+	Silent	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	15	99500587	99500587	C	T	SNP	IGF1R	ENST00000268035	human	ensembl	69_37n	+1	known	silent	c.4020	p.F1340	0.990	pirsf_Tyr_kinase_insulin-like_rcpt	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443	39	0	0.00	31	21	40.38	-	-	-
KIAA0226L	0	genome.wustl.edu	37	13	46946584	46946584	+	Silent	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	13	46946584	46946584	C	T	SNP	KIAA0226L	ENST00000389908	human	ensembl	69_37n	-1	known	silent	c.27	p.Q9	0.037	NULL	NULL	-	no_errors	KIAA0226L	HGNC	ENSG00000102445	41	0	0.00	36	19	34.55	-	-	-
KIF21B	0	genome.wustl.edu	37	1	200977992	200977992	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	1	200977992	200977992	C	T	SNP	KIF21B	ENST00000422435	human	ensembl	69_37n	-1	known	missense	c.352	p.A118T	0.013	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852	26	0	0.00	45	24	34.78	-	-	-
LOXL4	0	genome.wustl.edu	37	10	100021813	100021813	+	Silent	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	10	100021813	100021813	G	A	SNP	LOXL4	ENST00000260702	human	ensembl	69_37n	-1	known	silent	c.435	p.V145	0.067	NULL	pfam_Lysyl_oxidase,pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Lysyl_oxidase,prints_Srcr_rcpt	-	no_errors	LOXL4	HGNC	ENSG00000138131	15	0	0.00	14	8	36.36	-	-	-
LTV1	0	genome.wustl.edu	37	6	144178937	144178937	+	Silent	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	6	144178937	144178937	G	A	SNP	LTV1	ENST00000367576	human	ensembl	69_37n	+1	known	silent	c.588	p.E196	0.002	pfam_LTV	pfam_LTV	-	no_errors	LTV1	HGNC	ENSG00000135521	56	0	0.00	47	16	25.40	-	-	-
MIR7-3HG	0	genome.wustl.edu	37	19	4772449	4772449	+	RNA	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	19	4772449	4772449	C	T	SNP	MIR7-3HG	ENST00000588711	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MIR7-3HG	HGNC	ENSG00000176840	30	0	0.00	35	4	10.26	-	-	-
MOCS1	0	genome.wustl.edu	37	6	39874404	39874404	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	6	39874404	39874404	G	A	SNP	MOCS1	ENST00000340692	human	ensembl	69_37n	-1	known	missense	c.1640	p.T547I	1.000	pfam_Mopterin_CF_biosynth-C_dom,superfamily_Mopterin_CF_biosynth-C_dom,tigrfam_Mo_CF_biosynth-C	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615	33	0	0.00	26	20	43.48	-	-	-
MXRA7	0	genome.wustl.edu	37	17	74684401	74684401	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	17	74684401	74684401	T	C	SNP	MXRA7	ENST00000592148	human	ensembl	69_37n	-1	putative	missense	c.329	p.H110R	0.000	NULL	NULL	-	no_errors	MXRA7	HGNC	ENSG00000182534	33	0	0.00	32	4	11.11	-	-	-
NRXN3	0	genome.wustl.edu	37	14	80328015	80328015	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	14	80328015	80328015	C	T	SNP	NRXN3	ENST00000335750	human	ensembl	69_37n	+1	known	missense	c.2894	p.T965M	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	14	0	0.00	8	10	55.56	-	-	-
PABPC4L	0	genome.wustl.edu	37	4	135121318	135121318	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	4	135121318	135121318	C	T	SNP	PABPC4L	ENST00000529122	human	ensembl	69_37n	-1	known	missense	c.1031	p.R344Q	0.721	tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC4L	HGNC	ENSG00000254535	33	0	0.00	41	19	31.67	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	18	0	0.00	10	13	56.52	-	-	-
PLEC	0	genome.wustl.edu	37	8	145001204	145001204	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	8	145001204	145001204	C	A	SNP	PLEC	ENST00000322810	human	ensembl	69_37n	-1	known	missense	c.4297	p.V1433L	0.957	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	16	0	0.00	24	16	40.00	-	-	-
PLTP	0	genome.wustl.edu	37	20	44534909	44534909	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	20	44534909	44534909	G	A	SNP	PLTP	ENST00000542937	human	ensembl	69_37n	-1	known	missense	c.763	p.R255W	1.000	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	PLTP	HGNC	ENSG00000100979	16	0	0.00	25	15	37.50	-	-	-
RAB19	0	genome.wustl.edu	37	7	140111798	140111798	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	7	140111798	140111798	C	G	SNP	RAB19	ENST00000275874	human	ensembl	69_37n	+1	known	missense	c.467	p.P156R	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB19	HGNC	ENSG00000146955	68	0	0.00	11	25	69.44	-	-	-
RMND1	0	genome.wustl.edu	37	6	151738413	151738413	+	Splice_Site	SNP	C	C	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	6	151738413	151738413	C	A	SNP	RMND1	ENST00000367303	human	ensembl	69_37n	-1	known	splice_site	c.1200+1	e9+1	1.000	-	-	-	no_errors	RMND1	HGNC	ENSG00000155906	26	0	0.00	28	15	34.88	-	-	-
SERPINC1	0	genome.wustl.edu	37	1	173878836	173878836	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	1	173878836	173878836	A	C	SNP	SERPINC1	ENST00000367698	human	ensembl	69_37n	-1	known	missense	c.1007	p.L336R	0.997	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINC1	HGNC	ENSG00000117601	43	0	0.00	80	15	15.79	-	-	-
SH2D3C	0	genome.wustl.edu	37	9	130511725	130511725	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	9	130511725	130511725	C	T	SNP	SH2D3C	ENST00000440630	human	ensembl	69_37n	-1	known	nonsense	c.414	p.W138*	1.000	smart_SH2,pfscan_SH2,prints_SH2	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SH2D3C	HGNC	ENSG00000095370	38	0	0.00	17	23	57.50	-	-	-
SLC39A11	0	genome.wustl.edu	37	17	70643714	70643714	+	RNA	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	17	70643714	70643714	G	A	SNP	SLC39A11	ENST00000579988	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC39A11	HGNC	ENSG00000133195	27	0	0.00	25	20	44.44	-	-	-
SMG9	0	genome.wustl.edu	37	19	44249017	44249017	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	19	44249017	44249017	T	C	SNP	SMG9	ENST00000270066	human	ensembl	69_37n	-1	known	missense	c.608	p.D203G	1.000	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG9	HGNC	ENSG00000105771	41	0	0.00	31	12	27.91	-	-	-
SOCS4	0	genome.wustl.edu	37	14	55510648	55510648	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	14	55510648	55510648	G	T	SNP	SOCS4	ENST00000339298	human	ensembl	69_37n	+1	known	nonsense	c.889	p.E297*	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS4	HGNC	ENSG00000180008	34	0	0.00	20	3	13.04	-	-	-
SPG20	0	genome.wustl.edu	37	13	36900603	36900603	+	RNA	SNP	C	C	G			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	13	36900603	36900603	C	G	SNP	SPG20	ENST00000495510	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	SPG20	HGNC	ENSG00000133104	22	0	0.00	11	8	42.11	-	-	-
TBP	0	genome.wustl.edu	37	6	170871058	170871058	+	Silent	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	6	170871058	170871058	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.234	p.Q78	0.998	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	33	0	0.00	40	9	17.65	-	-	-
TBRG4	0	genome.wustl.edu	37	7	45145242	45145242	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	7	45145242	45145242	T	C	SNP	TBRG4	ENST00000258770	human	ensembl	69_37n	-1	known	missense	c.533	p.K178R	1.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	TBRG4	HGNC	ENSG00000136270	20	0	0.00	32	10	23.81	-	-	-
TOX	0	genome.wustl.edu	37	8	59750755	59750755	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	8	59750755	59750755	A	T	SNP	TOX	ENST00000361421	human	ensembl	69_37n	-1	known	nonsense	c.809	p.L270*	0.919	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	TOX	HGNC	ENSG00000198846	48	0	0.00	46	18	28.12	-	-	-
VPS13B	0	genome.wustl.edu	37	8	100880677	100880677	+	Silent	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	8	100880677	100880677	G	A	SNP	VPS13B	ENST00000358544	human	ensembl	69_37n	+1	known	silent	c.11451	p.V3817	1.000	pfam_Autophagy-rel_C	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	37	0	0.00	28	26	48.15	-	-	-
WASH6P	0	genome.wustl.edu	37	X	155252116	155252116	+	Silent	SNP	C	C	T			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	X	155252116	155252116	C	T	SNP	WASH6P	ENST00000359512	human	ensembl	69_37n	+1	known	silent	c.576	p.T192	0.997	NULL	pfam_WASH_WASD	-	no_errors	WASH6P	HGNC	ENSG00000182484	42	0	0.00	46	13	22.03	-	-	-
ZAN	0	genome.wustl.edu	37	7	100349919	100349919	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	7	100349919	100349919	T	C	SNP	ZAN	ENST00000546292	human	ensembl	69_37n	+1	known	missense	c.2191	p.S731P	0.000	NULL	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	18	0	0.00	19	6	24.00	-	-	-
ZBTB38	0	genome.wustl.edu	37	3	141164738	141164738	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	3	141164738	141164738	G	A	SNP	ZBTB38	ENST00000321464	human	ensembl	69_37n	+1	known	missense	c.3511	p.E1171K	0.999	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311	17	0	0.00	16	16	50.00	-	-	-
ZNF324	0	genome.wustl.edu	37	19	58983309	58983309	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	19	58983309	58983309	A	G	SNP	ZNF324	ENST00000196482	human	ensembl	69_37n	+1	known	missense	c.1450	p.T484A	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324	HGNC	ENSG00000083812	61	0	0.00	35	24	40.68	-	-	-
ZNF879	0	genome.wustl.edu	37	5	178459827	178459827	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A42T-01A-11D-A243-09	TCGA-BH-A42T-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d13900dd-7b11-4eda-80be-39432a8ef6fd	183475fd-fef3-42f3-aeb4-594394187c24	5	178459827	178459827	G	A	SNP	ZNF879	ENST00000444149	human	ensembl	69_37n	+1	known	missense	c.878	p.C293Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF879	HGNC	ENSG00000234284	25	0	0.00	26	9	25.71	-	-	-
