Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABTB2	0	genome.wustl.edu	37	11	34192619	34192619	+	Splice_Site	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	11	34192619	34192619	C	T	SNP	ABTB2	ENST00000435224	human	ensembl	69_37n	-1	known	splice_site	c.1398-1	e5-1	1.000	-	-	-	no_errors	ABTB2	HGNC	ENSG00000166016	42	0	0.00	6	17	73.91	-	-	-
ADAMTS20	0	genome.wustl.edu	37	12	43823449	43823449	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	12	43823449	43823449	C	T	SNP	ADAMTS20	ENST00000389420	human	ensembl	69_37n	-1	known	missense	c.3460	p.A1154T	0.644	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	71	0	0.00	66	24	26.67	-	-	-
ASTN1	0	genome.wustl.edu	37	1	176863701	176863701	+	Silent	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	176863701	176863701	C	T	SNP	ASTN1	ENST00000367654	human	ensembl	69_37n	-1	known	silent	c.2961	p.Q987	1.000	smart_MACPF	superfamily_Fibronectin_type3,smart_EGF-like,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	78	0	0.00	90	23	20.35	-	-	-
AXIN2	0	genome.wustl.edu	37	17	63554225	63554225	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	17	63554225	63554225	C	G	SNP	AXIN2	ENST00000307078	human	ensembl	69_37n	-1	known	missense	c.514	p.D172H	1.000	pfam_Regulat_G_prot_signal,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal,pfscan_Regulat_G_prot_signal	pfam_DIX,pfam_Regulat_G_prot_signal,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal,prints_Regulat_G_prot_signal	-	no_errors	AXIN2	HGNC	ENSG00000168646	162	0	0.00	107	52	32.70	-	-	-
BMS1P4	0	genome.wustl.edu	37	10	75481226	75481226	+	RNA	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	10	75481226	75481226	C	T	SNP	BMS1P4	ENST00000399449	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-464F9.1	Clone_based_vega_gene	ENSG00000242288	48	0	0.00	30	7	18.92	-	-	-
C1orf198	0	genome.wustl.edu	37	1	230979431	230979431	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	230979431	230979431	C	T	SNP	C1orf198	ENST00000366663	human	ensembl	69_37n	-1	known	missense	c.596	p.R199Q	1.000	NULL	NULL	-	no_errors	C1orf198	HGNC	ENSG00000119280	40	0	0.00	50	18	26.47	-	-	-
C1orf226	0	genome.wustl.edu	37	1	162351892	162351892	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	162351892	162351892	G	A	SNP	C1orf226	ENST00000426197	human	ensembl	69_37n	+1	known	silent	c.330	p.R110	0.999	NULL	NULL	-	no_errors	C1orf226	HGNC	ENSG00000239887	14	0	0.00	15	18	54.55	-	-	-
CAMK2A	0	genome.wustl.edu	37	5	149637130	149637130	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	149637130	149637130	C	T	SNP	CAMK2A	ENST00000398376	human	ensembl	69_37n	-1	known	missense	c.268	p.D90N	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMK2A	HGNC	ENSG00000070808	74	0	0.00	51	30	37.04	-	-	-
CAMSAP3	0	genome.wustl.edu	37	19	7676908	7676908	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	19	7676908	7676908	C	T	SNP	CAMSAP3	ENST00000446248	human	ensembl	69_37n	+1	known	missense	c.1610	p.S537F	0.095	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrell-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826	38	0	0.00	16	17	51.52	-	-	-
CATSPER2	0	genome.wustl.edu	37	15	43940189	43940189	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	15	43940189	43940189	T	A	SNP	CATSPER2	ENST00000299989	human	ensembl	69_37n	-1	known	missense	c.71	p.D24V	0.998	NULL	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762	83	0	0.00	49	33	40.24	-	-	-
CD19	0	genome.wustl.edu	37	16	28948602	28948605	+	Frame_Shift_Del	DEL	AGAG	AGAG	-			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	AGAG	AGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	16	28948602	28948605	AGAG	-	DEL	CD19	ENST00000538922	human	ensembl	69_37n	+1	known	frame_shift_del	c.1209_1212	p.E404fs	0.993:0.996:0.999:1.000	NULL	smart_Ig_sub,pfscan_Ig-like	-	no_errors	CD19	HGNC	ENSG00000177455	23	0	0.00	26	22	45.83	-	-	-
CD300LG	0	genome.wustl.edu	37	17	41939193	41939193	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	17	41939193	41939193	C	T	SNP	CD300LG	ENST00000317310	human	ensembl	69_37n	+1	known	nonsense	c.913	p.Q305*	0.008	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	CD300LG	HGNC	ENSG00000161649	29	0	0.00	30	15	33.33	-	-	-
CNTN6	0	genome.wustl.edu	37	3	1414111	1414111	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	1414111	1414111	G	A	SNP	CNTN6	ENST00000350110	human	ensembl	69_37n	+1	known	missense	c.1621	p.V541I	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN6	HGNC	ENSG00000134115	134	0	0.00	86	48	35.82	-	-	-
CTCF	0	genome.wustl.edu	37	16	67662443	67662443	+	Silent	SNP	A	A	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	16	67662443	67662443	A	T	SNP	CTCF	ENST00000264010	human	ensembl	69_37n	+1	known	silent	c.1689	p.T563	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCF	HGNC	ENSG00000102974	141	0	0.00	40	38	48.72	-	-	-
CYP11B1	0	genome.wustl.edu	37	8	143957771	143957771	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	8	143957771	143957771	G	A	SNP	CYP11B1	ENST00000292427	human	ensembl	69_37n	-1	known	silent	c.840	p.F280	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882	102	0	0.00	131	30	18.63	-	-	-
DAB2	0	genome.wustl.edu	37	5	39383284	39383284	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	39383284	39383284	G	A	SNP	DAB2	ENST00000320816	human	ensembl	69_37n	-1	known	silent	c.777	p.G259	1.000	NULL	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	-	no_errors	DAB2	HGNC	ENSG00000153071	109	0	0.00	76	39	33.91	-	-	-
DNAH3	0	genome.wustl.edu	37	16	20976523	20976523	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	16	20976523	20976523	C	T	SNP	DNAH3	ENST00000261383	human	ensembl	69_37n	-1	known	missense	c.8683	p.D2895N	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	69	0	0.00	34	56	62.22	-	-	-
EPOR	0	genome.wustl.edu	37	19	11489402	11489402	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	19	11489402	11489402	C	G	SNP	EPOR	ENST00000222139	human	ensembl	69_37n	-1	known	missense	c.880	p.E294Q	0.957	pirsf_Erythropoietin_rcpt	pfam_Growth/epo_recpt_lig-bind,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pirsf_Erythropoietin_rcpt,pfscan_Fibronectin_type3	-	no_errors	EPOR	HGNC	ENSG00000187266	58	0	0.00	32	7	17.95	-	-	-
EYA4	0	genome.wustl.edu	37	6	133783840	133783840	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	6	133783840	133783840	G	A	SNP	EYA4	ENST00000355167	human	ensembl	69_37n	+1	known	missense	c.662	p.S221N	1.000	NULL	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC	ENSG00000112319	72	0	0.00	38	19	33.33	-	-	-
F8	0	genome.wustl.edu	37	X	154124399	154124399	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	X	154124399	154124399	C	A	SNP	F8	ENST00000360256	human	ensembl	69_37n	-1	known	missense	c.6382	p.G2128W	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	68	0	0.00	47	23	32.86	-	-	-
FAM227B	0	genome.wustl.edu	37	15	49659665	49659665	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	15	49659665	49659665	G	A	SNP	FAM227B	ENST00000299338	human	ensembl	69_37n	-1	known	silent	c.1251	p.L417	0.169	NULL	NULL	-	no_errors	FAM227B	HGNC	ENSG00000166262	91	0	0.00	73	24	24.74	-	-	-
FAM81B	0	genome.wustl.edu	37	5	94749730	94749730	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	94749730	94749730	A	G	SNP	FAM81B	ENST00000283357	human	ensembl	69_37n	+1	known	missense	c.373	p.I125V	0.719	NULL	NULL	-	no_errors	FAM81B	HGNC	ENSG00000153347	94	0	0.00	75	40	34.78	-	-	-
FANCG	0	genome.wustl.edu	37	9	35076497	35076497	+	Silent	SNP	T	T	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	9	35076497	35076497	T	C	SNP	FANCG	ENST00000378643	human	ensembl	69_37n	-1	known	silent	c.1008	p.S336	0.768	NULL	superfamily_Sig_transdc_His_kin_Hpt_dom,smart_TPR_repeat	-	no_errors	FANCG	HGNC	ENSG00000221829	84	0	0.00	22	26	54.17	-	-	-
FBXO32	0	genome.wustl.edu	37	8	124526556	124526556	+	Silent	SNP	T	T	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	8	124526556	124526556	T	C	SNP	FBXO32	ENST00000517956	human	ensembl	69_37n	-1	known	silent	c.390	p.A130	1.000	NULL	superfamily_F-box_dom_cyclin-like	-	no_errors	FBXO32	HGNC	ENSG00000156804	67	0	0.00	47	83	63.85	-	-	-
FREM3	0	genome.wustl.edu	37	4	144617794	144617794	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	4	144617794	144617794	G	A	SNP	FREM3	ENST00000329798	human	ensembl	69_37n	-1	putative	silent	c.4035	p.V1345	0.997	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC	ENSG00000183090	134	0	0.00	88	37	29.60	-	-	-
GOPC	0	genome.wustl.edu	37	6	117894762	117894762	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	6	117894762	117894762	C	T	SNP	GOPC	ENST00000368498	human	ensembl	69_37n	-1	known	missense	c.684	p.M228I	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GOPC	HGNC	ENSG00000047932	203	0	0.00	107	62	36.69	-	-	-
GRIN2A	0	genome.wustl.edu	37	16	9857878	9857878	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	16	9857878	9857878	C	T	SNP	GRIN2A	ENST00000330684	human	ensembl	69_37n	-1	known	missense	c.3523	p.E1175K	0.351	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454	111	0	0.00	93	29	23.77	-	-	-
HADH	0	genome.wustl.edu	37	4	108954346	108954346	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	4	108954346	108954346	G	A	SNP	HADH	ENST00000403312	human	ensembl	69_37n	+1	known	missense	c.775	p.E259K	1.000	pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,pfam_AlaDH/PNT_NAD(H)-bd,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_UDP-Glc/GDP-Man_DH_N,superfamily_6-PGluconate_DH_C-like	-	no_errors	HADH	HGNC	ENSG00000138796	119	0	0.00	71	38	34.86	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153219201	153219201	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	X	153219201	153219201	C	T	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.4354	p.D1452N	0.969	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	33	0	0.00	21	12	36.36	-	-	-
IL18R1	0	genome.wustl.edu	37	2	102998106	102998106	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	2	102998106	102998106	C	G	SNP	IL18R1	ENST00000233957	human	ensembl	69_37n	+1	known	missense	c.652	p.L218V	0.549	NULL	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like,prints_IL1_rcpt_1,prints_IL1_rcpt_I/II	-	no_errors	IL18R1	HGNC	ENSG00000115604	163	0	0.00	78	35	30.97	-	-	-
IL20	0	genome.wustl.edu	37	1	207039354	207039354	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	207039354	207039354	G	A	SNP	IL20	ENST00000367096	human	ensembl	69_37n	+1	known	missense	c.157	p.V53M	0.694	pfam_Interleukin-10/19/20/24,superfamily_4_helix_cytokine-like_core,smart_Interleukin-10/19/20/24,prints_Interleukin-24	pfam_Interleukin-10/19/20/24,superfamily_4_helix_cytokine-like_core,smart_Interleukin-10/19/20/24,prints_Interleukin-20,prints_Interleukin-24	-	no_errors	IL20	HGNC	ENSG00000162891	57	0	0.00	61	17	21.79	-	-	-
KCNQ3	0	genome.wustl.edu	37	8	133192479	133192479	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	8	133192479	133192479	G	A	SNP	KCNQ3	ENST00000388996	human	ensembl	69_37n	-1	known	silent	c.702	p.I234	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156	39	0	0.00	66	23	25.84	-	-	-
KCNQ4	0	genome.wustl.edu	37	1	41300696	41300696	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	41300696	41300696	C	T	SNP	KCNQ4	ENST00000443478	human	ensembl	69_37n	+1	novel	missense	c.1252	p.R418C	1.000	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	KCNQ4	HGNC	ENSG00000117013	25	0	0.00	22	8	26.67	-	-	-
KIAA1210	0	genome.wustl.edu	37	X	118215410	118215410	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	X	118215410	118215410	C	T	SNP	KIAA1210	ENST00000402510	human	ensembl	69_37n	-1	known	missense	c.5012	p.R1671Q	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	177	0	0.00	92	85	48.02	-	-	-
KIAA2018	0	genome.wustl.edu	37	3	113375166	113375166	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	113375166	113375166	C	T	SNP	KIAA2018	ENST00000316407	human	ensembl	69_37n	-1	known	missense	c.5363	p.R1788H	1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	KIAA2018	HGNC	ENSG00000176542	55	0	0.00	37	21	36.21	-	-	-
KIF23	0	genome.wustl.edu	37	15	69733225	69733225	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	15	69733225	69733225	G	C	SNP	KIF23	ENST00000260363	human	ensembl	69_37n	+1	known	missense	c.2186	p.W729S	1.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF23	HGNC	ENSG00000137807	73	0	0.00	63	23	26.74	-	-	-
LRP4	0	genome.wustl.edu	37	11	46920500	46920500	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	11	46920500	46920500	C	G	SNP	LRP4	ENST00000378623	human	ensembl	69_37n	-1	known	missense	c.631	p.D211H	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569	27	0	0.00	6	6	50.00	-	-	-
LRRIQ1	0	genome.wustl.edu	37	12	85438525	85438525	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	12	85438525	85438525	C	T	SNP	LRRIQ1	ENST00000393217	human	ensembl	69_37n	+1	known	missense	c.274	p.H92Y	0.587	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640	58	0	0.00	57	19	25.00	-	-	-
MAB21L3	0	genome.wustl.edu	37	1	116670894	116670894	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	116670894	116670894	G	C	SNP	MAB21L3	ENST00000369500	human	ensembl	69_37n	+1	known	missense	c.789	p.M263I	0.997	pfam_Mab-21_dom	pfam_Mab-21_dom	-	no_errors	MAB21L3	HGNC	ENSG00000173212	103	0	0.00	34	40	54.05	-	-	-
MMP14	0	genome.wustl.edu	37	14	23311622	23311622	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	14	23311622	23311622	C	G	SNP	MMP14	ENST00000311852	human	ensembl	69_37n	+1	known	missense	c.384	p.I128M	1.000	pirsf_Pept_M10A_matrix_strom,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_matrix_strom,pfam_Hemopexin/matrixin_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,prints_Pept_M10A_matrixin	-	no_errors	MMP14	HGNC	ENSG00000157227	39	0	0.00	32	7	17.95	-	-	-
MPI	0	genome.wustl.edu	37	15	75188521	75188521	+	Silent	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	15	75188521	75188521	C	T	SNP	MPI	ENST00000352410	human	ensembl	69_37n	+1	known	silent	c.699	p.I233	0.068	pfam_Man6P_Isoase-1,superfamily_RmlC_Cupin,pirsf_Mannose-6-P_Isomerase,tigrfam_Man6P_Isoase-1	pfam_Man6P_Isoase-1,superfamily_RmlC_Cupin,pirsf_Mannose-6-P_Isomerase,prints_Mannose-6-P_Isomerase,tigrfam_Man6P_Isoase-1	-	no_errors	MPI	HGNC	ENSG00000178802	74	0	0.00	40	19	32.20	-	-	-
MRPL3	0	genome.wustl.edu	37	3	131188558	131188558	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	131188558	131188558	C	T	SNP	MRPL3	ENST00000511168	human	ensembl	69_37n	-1	putative	missense	c.841	p.D281N	0.991	pfam_Ribosomal_L3,superfamily_Transl_elong_init/rib_B-barrel,tigrfam_Ribosomal_L3_bac/org-type	pfam_Ribosomal_L3,superfamily_Transl_elong_init/rib_B-barrel,tigrfam_Ribosomal_L3_bac/org-type	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MRPL3	HGNC	ENSG00000114686	120	0	0.00	78	25	24.27	-	-	-
MRPL53	0	genome.wustl.edu	37	2	74699368	74699368	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	2	74699368	74699368	G	A	SNP	MRPL53	ENST00000258105	human	ensembl	69_37n	-1	known	missense	c.217	p.R73C	1.000	superfamily_Thioredoxin-like_fold	pfam_Ribosomal_L53_mit,superfamily_Thioredoxin-like_fold	-	no_errors	MRPL53	HGNC	ENSG00000204822	20	0	0.00	24	11	31.43	-	-	-
MRPS25	0	genome.wustl.edu	37	3	15094076	15094076	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	15094076	15094076	G	A	SNP	MRPS25	ENST00000253686	human	ensembl	69_37n	-1	known	nonsense	c.394	p.R132*	0.836	NULL	pfam_Ribosome/NADH_DH,superfamily_Thioredoxin-like_fold,smart_Ribosome/NADH_DH	-	no_errors	MRPS25	HGNC	ENSG00000131368	59	0	0.00	44	41	48.24	-	-	-
MVP	0	genome.wustl.edu	37	16	29853120	29853120	+	Silent	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	16	29853120	29853120	C	T	SNP	MVP	ENST00000357402	human	ensembl	69_37n	+1	known	silent	c.1395	p.N465	0.079	NULL	pfam_Vault_N,pfam_MVP_shoulder	-	no_errors	MVP	HGNC	ENSG00000013364	21	0	0.00	18	11	37.93	-	-	-
MYH13	0	genome.wustl.edu	37	17	10265677	10265677	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	17	10265677	10265677	G	A	SNP	MYH13	ENST00000252172	human	ensembl	69_37n	-1	known	silent	c.348	p.Y116	0.997	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH13	HGNC	ENSG00000006788	246	0	0.00	78	100	56.18	-	-	-
MYH8	0	genome.wustl.edu	37	17	10312639	10312639	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	17	10312639	10312639	C	A	SNP	MYH8	ENST00000403437	human	ensembl	69_37n	-1	known	missense	c.1854	p.K618N	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	63	0	0.00	44	11	20.00	-	-	-
NAMPT	0	genome.wustl.edu	37	7	105893591	105893591	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	7	105893591	105893591	C	G	SNP	NAMPT	ENST00000222553	human	ensembl	69_37n	-1	known	missense	c.1237	p.V413L	1.000	pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	-	no_errors	NAMPT	HGNC	ENSG00000105835	91	0	0.00	59	25	29.76	-	-	-
NCR1	0	genome.wustl.edu	37	19	55420647	55420647	+	Silent	SNP	A	A	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	19	55420647	55420647	A	G	SNP	NCR1	ENST00000291890	human	ensembl	69_37n	+1	known	silent	c.399	p.E133	0.033	smart_Ig_sub	smart_Ig_sub	-	no_errors	NCR1	HGNC	ENSG00000189430	44	0	0.00	38	19	33.33	-	-	-
NIPBL	0	genome.wustl.edu	37	5	37020923	37020923	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	37020923	37020923	C	T	SNP	NIPBL	ENST00000282516	human	ensembl	69_37n	+1	known	nonsense	c.5272	p.R1758*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	126	0	0.00	104	39	27.27	-	-	-
NKAIN2	0	genome.wustl.edu	37	6	124604227	124604227	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	6	124604227	124604227	T	A	SNP	NKAIN2	ENST00000368417	human	ensembl	69_37n	+1	known	missense	c.131	p.I44N	1.000	pfam_Na/K-Atpase_Interacting	pfam_Na/K-Atpase_Interacting	-	no_errors	NKAIN2	HGNC	ENSG00000188580	193	0	0.00	113	60	34.68	-	-	-
NLGN4X	0	genome.wustl.edu	37	X	5811360	5811360	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	X	5811360	5811360	G	A	SNP	NLGN4X	ENST00000381093	human	ensembl	69_37n	-1	known	missense	c.2009	p.S670F	0.997	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938	189	0	0.00	95	40	29.63	-	-	-
OR2V1	0	genome.wustl.edu	37	5	180551416	180551416	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	180551416	180551416	C	-	DEL	OR2V1	ENST00000329365	human	ensembl	69_37n	-1	known	frame_shift_del	c.889	p.E297fs	0.989	prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2V1	HGNC	ENSG00000185372	30	0	0.00	21	7	25.00	-	-	-
P4HA3	0	genome.wustl.edu	37	11	73978162	73978162	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	11	73978162	73978162	C	T	SNP	P4HA3	ENST00000427714	human	ensembl	69_37n	-1	putative	missense	c.1759	p.A587T	0.000	NULL	pfam_Pro_4_hyd_alph_N,smart_Pro_4_hyd_alph	-	no_errors	P4HA3	HGNC	ENSG00000149380	17	0	0.00	19	24	55.81	-	-	-
PCDHB3	0	genome.wustl.edu	37	5	140482555	140482555	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	140482555	140482555	C	A	SNP	PCDHB3	ENST00000231130	human	ensembl	69_37n	+1	known	missense	c.2322	p.F774L	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205	144	0	0.00	89	43	32.58	-	-	-
PCLO	0	genome.wustl.edu	37	7	82544011	82544011	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	7	82544011	82544011	C	G	SNP	PCLO	ENST00000333891	human	ensembl	69_37n	-1	known	missense	c.13291	p.D4431H	1.000	NULL	pfam_Znf_piccolo,pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	71	0	0.00	51	27	34.62	-	-	-
PDZD2	0	genome.wustl.edu	37	5	31799670	31799670	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	5	31799670	31799670	G	C	SNP	PDZD2	ENST00000282493	human	ensembl	69_37n	+1	known	missense	c.315	p.K105N	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	87	0	0.00	55	23	29.49	-	-	-
PIK3CB	0	genome.wustl.edu	37	3	138374293	138374293	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	138374293	138374293	C	T	SNP	PIK3CB	ENST00000289153	human	ensembl	69_37n	-1	known	missense	c.3151	p.E1051K	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_ARM-type_fold,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CB	HGNC	ENSG00000051382	61	0	0.00	67	29	30.21	-	-	-
POLI	0	genome.wustl.edu	37	18	51795958	51795960	+	In_Frame_Del	DEL	CGA	CGA	-			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	CGA	CGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	18	51795958	51795960	CGA	-	DEL	POLI	ENST00000579534	human	ensembl	69_37n	+1	known	in_frame_del	c.42_44	p.D17in_frame_del	0.000:0.000:0.000	NULL	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLI	HGNC	ENSG00000101751	9	0	0.00	4	2	33.33	-	-	-
POTEM	0	genome.wustl.edu	37	14	20020113	20020113	+	Silent	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	14	20020113	20020113	C	T	SNP	POTEM	ENST00000547848	human	ensembl	69_37n	-1	known	silent	c.108	p.R36	0.101	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537	12	0	0.00	11	6	35.29	-	-	-
PPAPDC1B	0	genome.wustl.edu	37	8	38124737	38124737	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	8	38124737	38124737	C	G	SNP	PPAPDC1B	ENST00000419686	human	ensembl	69_37n	-1	known	missense	c.511	p.E171Q	0.043	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAPDC1B	HGNC	ENSG00000147535	72	0	0.00	203	114	35.74	-	-	-
PRG4	0	genome.wustl.edu	37	1	186280194	186280194	+	Silent	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	186280194	186280194	C	T	SNP	PRG4	ENST00000445192	human	ensembl	69_37n	+1	known	silent	c.3528	p.F1176	0.005	superfamily_Hemopexin/matrixin,smart_Hemopexin/matrixin_repeat	pfam_Somatomedin_B_dom,pfam_Hemopexin/matrixin_repeat,superfamily_Hemopexin/matrixin,smart_Somatomedin_B_dom,smart_Hemopexin/matrixin_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	163	0	0.00	150	61	28.91	-	-	-
PVRL4	0	genome.wustl.edu	37	1	161043062	161043062	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	161043062	161043062	C	G	SNP	PVRL4	ENST00000368012	human	ensembl	69_37n	-1	known	missense	c.1261	p.E421Q	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	PVRL4	HGNC	ENSG00000143217	31	0	0.00	41	14	25.45	-	-	-
RALGAPA1	0	genome.wustl.edu	37	14	36192403	36192403	+	Nonsense_Mutation	SNP	A	A	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	14	36192403	36192403	A	T	SNP	RALGAPA1	ENST00000258840	human	ensembl	69_37n	-1	known	nonsense	c.1934	p.L645*	1.000	NULL	pfam_Rap_GAP,superfamily_ARM-type_fold,pfscan_Rap_GAP	-	no_errors	RALGAPA1	HGNC	ENSG00000174373	65	0	0.00	61	33	35.11	-	-	-
RASAL2	0	genome.wustl.edu	37	1	178408562	178408562	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	178408562	178408562	G	A	SNP	RASAL2	ENST00000367649	human	ensembl	69_37n	+1	known	missense	c.680	p.R227H	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_Ca-dep,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_Ca-dep,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC	ENSG00000075391	77	0	0.00	46	38	45.24	-	-	-
RBM12B	0	genome.wustl.edu	37	8	94747082	94747082	+	Silent	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	8	94747082	94747082	G	A	SNP	RBM12B	ENST00000399300	human	ensembl	69_37n	-1	known	silent	c.1557	p.Y519	0.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM12B	HGNC	ENSG00000183808	53	0	0.00	50	47	48.45	-	-	-
RBM6	0	genome.wustl.edu	37	3	50091779	50091779	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	50091779	50091779	C	G	SNP	RBM6	ENST00000266022	human	ensembl	69_37n	+1	known	missense	c.1644	p.N548K	0.672	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534	107	0	0.00	30	48	61.54	-	-	-
RMND5A	0	genome.wustl.edu	37	2	86993049	86993049	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	2	86993049	86993049	C	A	SNP	RMND5A	ENST00000283632	human	ensembl	69_37n	+1	known	missense	c.756	p.H252Q	1.000	smart_CRA_dom	smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RMND5A	HGNC	ENSG00000153561	136	0	0.00	65	35	35.00	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037843	10037843	+	RNA	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	Y	10037843	10037843	C	T	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	20	0	0.00	11	4	26.67	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037883	10037883	+	RNA	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	Y	10037883	10037883	G	A	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	17	0	0.00	9	4	30.77	-	-	-
SACS	0	genome.wustl.edu	37	13	23915127	23915127	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	13	23915127	23915127	G	C	SNP	SACS	ENST00000382292	human	ensembl	69_37n	-1	known	missense	c.2888	p.S963C	1.000	NULL	pfam_HEPN,pfam_Ubiquitin,superfamily_ATPase-like_ATP-bd,superfamily_DnaJ_N,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_N,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	53	0	0.00	12	24	66.67	-	-	-
SLC4A3	0	genome.wustl.edu	37	2	220501075	220501075	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	2	220501075	220501075	C	A	SNP	SLC4A3	ENST00000273063	human	ensembl	69_37n	+1	known	missense	c.2324	p.A775D	0.983	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_HCO3_transpt_cyt,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923	51	0	0.00	33	16	32.65	-	-	-
SMC4	0	genome.wustl.edu	37	3	160141276	160141276	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	160141276	160141276	G	C	SNP	SMC4	ENST00000344722	human	ensembl	69_37n	+1	known	missense	c.2083	p.D695H	1.000	pfam_RecF/RecN/SMC,pfam_SMC_hinge,superfamily_SMC_hinge,smart_SMC_hinge	pfam_RecF/RecN/SMC,pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810	68	0	0.00	57	22	27.85	-	-	-
SNORA72	0	genome.wustl.edu	37	8	99053990	99053990	+	RNA	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	8	99053990	99053990	G	A	SNP	SNORA72	ENST00000501016	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.119	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	96	0	0.00	139	41	22.78	-	-	-
SRGAP2	0	genome.wustl.edu	37	1	206619542	206619542	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	1	206619542	206619542	G	C	SNP	SRGAP2	ENST00000414007	human	ensembl	69_37n	+1	known	missense	c.1576	p.E526Q	1.000	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_RhoGAP_dom,smart_SH3_domain,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_start_codon	SRGAP2	HGNC	ENSG00000163486	63	0	0.00	68	17	19.77	-	-	-
TBX18	0	genome.wustl.edu	37	6	85466511	85466511	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	6	85466511	85466511	G	A	SNP	TBX18	ENST00000369663	human	ensembl	69_37n	-1	known	missense	c.676	p.P226S	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX18	HGNC	ENSG00000112837	46	0	0.00	26	25	49.02	-	-	-
TC2N	0	genome.wustl.edu	37	14	92268677	92268677	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	14	92268677	92268677	G	C	SNP	TC2N	ENST00000340892	human	ensembl	69_37n	-1	known	missense	c.390	p.F130L	0.992	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	TC2N	HGNC	ENSG00000165929	68	0	0.00	47	15	24.19	-	-	-
TET1	0	genome.wustl.edu	37	10	70333071	70333071	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	10	70333071	70333071	G	A	SNP	TET1	ENST00000373644	human	ensembl	69_37n	+1	known	missense	c.976	p.V326I	0.985	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	46	0	0.00	29	19	39.58	-	-	-
TGM1	0	genome.wustl.edu	37	14	24729190	24729190	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	14	24729190	24729190	C	T	SNP	TGM1	ENST00000206765	human	ensembl	69_37n	-1	known	missense	c.832	p.G278R	1.000	NULL	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM1	HGNC	ENSG00000092295	46	0	0.00	22	13	37.14	-	-	-
THAP9	0	genome.wustl.edu	37	4	83839429	83839429	+	Silent	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	4	83839429	83839429	C	T	SNP	THAP9	ENST00000302236	human	ensembl	69_37n	+1	known	silent	c.2064	p.H688	0.001	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP9	HGNC	ENSG00000168152	42	0	0.00	31	19	38.00	-	-	-
TRIML1	0	genome.wustl.edu	37	4	189061035	189061035	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	4	189061035	189061035	A	T	SNP	TRIML1	ENST00000332517	human	ensembl	69_37n	+1	known	missense	c.323	p.D108V	0.005	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIML1	HGNC	ENSG00000184108	19	0	0.00	20	7	25.93	-	-	-
TRMT10C	0	genome.wustl.edu	37	3	101284455	101284455	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	3	101284455	101284455	C	T	SNP	TRMT10C	ENST00000309922	human	ensembl	69_37n	+1	known	missense	c.830	p.S277F	0.978	pfam_tRNA_m1G_MeTrfase	pfam_tRNA_m1G_MeTrfase	-	no_errors	TRMT10C	HGNC	ENSG00000174173	39	0	0.00	33	16	32.65	-	-	-
VSIG4	0	genome.wustl.edu	37	X	65247938	65247938	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D8-A1JC-01A-11D-A13L-09	TCGA-D8-A1JC-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	63a9d14f-d91a-47af-8ef6-8124193aa110	d6936adf-adbc-4cb1-b7cb-c7ef255864d1	X	65247938	65247938	G	A	SNP	VSIG4	ENST00000427538	human	ensembl	69_37n	-1	known	nonsense	c.490	p.Q164*	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	VSIG4	HGNC	ENSG00000155659	185	0	0.00	80	63	44.06	-	-	-
