Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMBRA1	0	genome.wustl.edu	37	11	46568822	46568822	+	Silent	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	11	46568822	46568822	C	T	SNP	AMBRA1	ENST00000458649	human	ensembl	69_37n	-1	known	silent	c.219	p.V73	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	62	0	0.00	48	20	29.41	-	-	-
AP3B1	0	genome.wustl.edu	37	5	77524009	77524009	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	5	77524009	77524009	G	A	SNP	AP3B1	ENST00000255194	human	ensembl	69_37n	-1	known	missense	c.334	p.L112F	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	-	no_errors	AP3B1	HGNC	ENSG00000132842	87	0	0.00	72	21	22.58	-	-	-
ATP2B2	0	genome.wustl.edu	37	3	10400565	10400565	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	3	10400565	10400565	C	T	SNP	ATP2B2	ENST00000352432	human	ensembl	69_37n	-1	known	missense	c.1946	p.R649Q	1.000	superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMCA	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B2	HGNC	ENSG00000157087	14	0	0.00	10	5	33.33	-	-	-
CACNG7	0	genome.wustl.edu	37	19	54418757	54418757	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	19	54418757	54418757	C	T	SNP	CACNG7	ENST00000222212	human	ensembl	69_37n	+1	known	missense	c.422	p.S141L	0.929	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g7su,prints_VDCC_gsu	-	no_errors	CACNG7	HGNC	ENSG00000105605	102	0	0.00	68	25	26.88	-	-	-
CATSPER2	0	genome.wustl.edu	37	15	43927353	43927354	+	Splice_Site	INS	-	-	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	15	43927353	43927354	-	T	INS	CATSPER2	ENST00000419262	human	ensembl	69_37n	-1	known	splice_site_ins	c.34-2_34-1	e2-1	0.001:0.002	-	-	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CATSPER2	HGNC	ENSG00000166762	19	0	0.00	27	3	10.00	-	-	-
CD2	0	genome.wustl.edu	37	1	117311125	117311125	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	1	117311125	117311125	A	C	SNP	CD2	ENST00000369478	human	ensembl	69_37n	+1	known	missense	c.776	p.E259A	0.011	NULL	pfam_Ig_C2-set,pfam_Ig_V-set,prints_T-cell_sdhesion_molc_CD2	-	no_errors	CD2	HGNC	ENSG00000116824	32	0	0.00	18	12	40.00	-	-	-
CILP	0	genome.wustl.edu	37	15	65496643	65496643	+	Silent	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	15	65496643	65496643	C	T	SNP	CILP	ENST00000261883	human	ensembl	69_37n	-1	known	silent	c.882	p.L294	0.026	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	CILP	HGNC	ENSG00000138615	55	0	0.00	48	14	22.58	-	-	-
COL11A1	0	genome.wustl.edu	37	1	103461544	103461544	+	Splice_Site	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	1	103461544	103461544	C	T	SNP	COL11A1	ENST00000358392	human	ensembl	69_37n	-1	known	splice_site	c.2331+1	e27+1	1.000	-	-	-	no_errors	COL11A1	HGNC	ENSG00000060718	23	0	0.00	19	19	50.00	-	-	-
DCD	0	genome.wustl.edu	37	12	55039438	55039438	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	12	55039438	55039438	A	T	SNP	DCD	ENST00000293371	human	ensembl	69_37n	-1	known	missense	c.151	p.L51I	0.001	NULL	NULL	-	no_errors	DCD	HGNC	ENSG00000161634	137	0	0.00	98	42	29.79	-	-	-
DDX18	0	genome.wustl.edu	37	2	118582184	118582184	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	2	118582184	118582184	G	A	SNP	DDX18	ENST00000263239	human	ensembl	69_37n	+1	known	missense	c.1106	p.R369Q	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX18	HGNC	ENSG00000088205	142	0	0.00	81	32	28.32	-	-	-
DGKB	0	genome.wustl.edu	37	7	14880851	14880851	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	7	14880851	14880851	G	A	SNP	DGKB	ENST00000258767	human	ensembl	69_37n	-1	known	missense	c.38	p.S13L	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267	119	0	0.00	98	52	34.67	-	-	-
DIAPH2	0	genome.wustl.edu	37	X	96185793	96185793	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	96185793	96185793	T	A	SNP	DIAPH2	ENST00000324765	human	ensembl	69_37n	+1	known	missense	c.1040	p.I347K	1.000	pfam_Drf_FH3,superfamily_ARM-type_fold	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	DIAPH2	HGNC	ENSG00000147202	126	0	0.00	83	42	33.60	-	-	-
DOCK7	0	genome.wustl.edu	37	1	62970400	62970400	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	1	62970400	62970400	G	C	SNP	DOCK7	ENST00000454575	human	ensembl	69_37n	-1	known	missense	c.2152	p.Q718E	0.996	superfamily_ARM-type_fold	pfam_DOCK,superfamily_ARM-type_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DOCK7	HGNC	ENSG00000116641	49	0	0.00	65	19	22.62	-	-	-
DPP4	0	genome.wustl.edu	37	2	162929936	162929936	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	2	162929936	162929936	C	T	SNP	DPP4	ENST00000360534	human	ensembl	69_37n	-1	known	missense	c.67	p.V23M	1.000	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP4	HGNC	ENSG00000197635	47	0	0.00	42	8	16.00	-	-	-
DST	0	genome.wustl.edu	37	6	56437729	56437729	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	6	56437729	56437729	C	T	SNP	DST	ENST00000370754	human	ensembl	69_37n	-1	known	missense	c.13277	p.R4426Q	0.993	superfamily_ABC_transptrTM_dom_typ1,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	DST	HGNC	ENSG00000151914	183	0	0.00	152	46	23.23	-	-	-
EP300	0	genome.wustl.edu	37	22	41545883	41545883	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	22	41545883	41545883	C	T	SNP	EP300	ENST00000263253	human	ensembl	69_37n	+1	known	missense	c.2498	p.S833L	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393	46	0	0.00	30	17	36.17	-	-	-
ERBB2	0	genome.wustl.edu	37	17	37880220	37880220	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	17	37880220	37880220	T	C	SNP	ERBB2	ENST00000269571	human	ensembl	69_37n	+1	known	missense	c.2264	p.L755S	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	72	0	0.00	83	44	34.65	-	-	-
ERVMER34-1	0	genome.wustl.edu	37	4	53610788	53610789	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	4	53610788	53610789	-	A	INS	ERVMER34-1	ENST00000440542	human	ensembl	69_37n	-1	known	frame_shift_ins	c.900_899	p.L300fs	0.001:0.001	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVMER34-1	HGNC	ENSG00000226887	65	0	0.00	61	12	16.44	-	-	-
F8	0	genome.wustl.edu	37	X	154182270	154182270	+	Silent	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	154182270	154182270	C	T	SNP	F8	ENST00000360256	human	ensembl	69_37n	-1	known	silent	c.1800	p.E600	1.000	superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	103	0	0.00	69	28	28.87	-	-	-
FAM45B	0	genome.wustl.edu	37	X	129629609	129629609	+	RNA	SNP	C	C	G			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	129629609	129629609	C	G	SNP	FAM45B	ENST00000592932	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	FAM45B	HGNC	ENSG00000221930	130	0	0.00	97	41	29.50	-	-	-
FAM75D5	0	genome.wustl.edu	37	9	84532651	84532651	+	RNA	SNP	T	T	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	9	84532651	84532651	T	A	SNP	FAM75D5	ENST00000527857	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM75D5	HGNC	ENSG00000240632	86	0	0.00	64	31	32.63	-	-	-
FAM78B	0	genome.wustl.edu	37	1	166135414	166135414	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	1	166135414	166135414	G	A	SNP	FAM78B	ENST00000435676	human	ensembl	69_37n	-1	known	missense	c.49	p.R17C	1.000	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	FAM78B	HGNC	ENSG00000188859	27	0	0.00	22	9	29.03	-	-	-
GPR142	0	genome.wustl.edu	37	17	72366697	72366697	+	Silent	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	17	72366697	72366697	C	T	SNP	GPR142	ENST00000335666	human	ensembl	69_37n	+1	known	silent	c.396	p.H132	0.025	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR142	HGNC	ENSG00000257008	58	0	0.00	57	29	33.33	-	-	-
GPR97	0	genome.wustl.edu	37	16	57710130	57710130	+	Silent	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	16	57710130	57710130	G	A	SNP	GPR97	ENST00000333493	human	ensembl	69_37n	+1	known	silent	c.225	p.E75	0.385	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_orphan_rcpt_GPR56	-	no_errors	GPR97	HGNC	ENSG00000182885	65	0	0.00	40	6	13.04	-	-	-
GPSM1	0	genome.wustl.edu	37	9	139229013	139229013	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	9	139229013	139229013	G	A	SNP	GPSM1	ENST00000440944	human	ensembl	69_37n	+1	known	missense	c.178	p.E60K	1.000	NULL	pfam_GoLoco_motif,pfam_TPR-1,smart_TPR_repeat,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GPSM1	HGNC	ENSG00000160360	33	0	0.00	16	6	27.27	-	-	-
GRID1	0	genome.wustl.edu	37	10	87379751	87379751	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	10	87379751	87379751	C	T	SNP	GRID1	ENST00000327946	human	ensembl	69_37n	-1	known	missense	c.2233	p.V745M	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771	52	0	0.00	44	17	27.87	-	-	-
HTR2A	0	genome.wustl.edu	37	13	47409635	47409635	+	Silent	SNP	C	C	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	13	47409635	47409635	C	A	SNP	HTR2A	ENST00000378688	human	ensembl	69_37n	-1	known	silent	c.753	p.V251	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_5HT2A_rcpt,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2A	HGNC	ENSG00000102468	30	0	0.00	31	12	27.91	-	-	-
INPP4A	0	genome.wustl.edu	37	2	99204011	99204011	+	Silent	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	2	99204011	99204011	G	A	SNP	INPP4A	ENST00000074304	human	ensembl	69_37n	+1	known	silent	c.2874	p.L958	1.000	NULL	superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	INPP4A	HGNC	ENSG00000040933	83	0	0.00	47	16	25.00	-	-	-
ISLR	0	genome.wustl.edu	37	15	74468296	74468296	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	15	74468296	74468296	G	A	SNP	ISLR	ENST00000249842	human	ensembl	69_37n	+1	known	missense	c.1097	p.G366E	0.962	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	ISLR	HGNC	ENSG00000129009	64	0	0.00	36	9	20.00	-	-	-
KLHL17	0	genome.wustl.edu	37	1	897038	897038	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	1	897038	897038	G	A	SNP	KLHL17	ENST00000338591	human	ensembl	69_37n	+1	known	missense	c.397	p.V133M	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL17	HGNC	ENSG00000187961	51	0	0.00	29	10	25.64	-	-	-
KRT6B	0	genome.wustl.edu	37	12	52844244	52844244	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	12	52844244	52844244	C	T	SNP	KRT6B	ENST00000252252	human	ensembl	69_37n	-1	known	missense	c.701	p.R234H	0.801	pfam_F	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6B	HGNC	ENSG00000185479	171	0	0.00	166	44	20.95	-	-	-
LOXL3	0	genome.wustl.edu	37	2	74763222	74763222	+	Silent	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	2	74763222	74763222	G	A	SNP	LOXL3	ENST00000264094	human	ensembl	69_37n	-1	known	silent	c.1149	p.L383	1.000	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_Srcr_rcpt,pfscan_Srcr_rcpt	pfam_Lysyl_oxidase,pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_Lysyl_oxidase,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	LOXL3	HGNC	ENSG00000115318	34	0	0.00	32	14	30.43	-	-	-
LRRC41	0	genome.wustl.edu	37	1	46751244	46751244	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	1	46751244	46751244	C	T	SNP	LRRC41	ENST00000343304	human	ensembl	69_37n	-1	known	missense	c.1285	p.E429K	0.994	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC41	HGNC	ENSG00000132128	45	0	0.00	47	7	12.96	-	-	-
MBTD1	0	genome.wustl.edu	37	17	49297759	49297761	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	17	49297759	49297761	AGA	-	DEL	MBTD1	ENST00000415868	human	ensembl	69_37n	-1	known	in_frame_del	c.220_218	p.F73in_frame_del	1.000:1.000:1.000	pfscan_Znf_FCS	pfam_Mbt,smart_Mbt,pfscan_Mbt,pfscan_Znf_FCS	-	no_errors	MBTD1	HGNC	ENSG00000011258	118	0	0.00	66	55	44.72	-	-	-
MED12L	0	genome.wustl.edu	37	3	151075105	151075105	+	Silent	SNP	C	C	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	3	151075105	151075105	C	A	SNP	MED12L	ENST00000474524	human	ensembl	69_37n	+1	known	silent	c.2661	p.L887	0.999	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	95	0	0.00	73	26	26.26	-	-	-
MED23	0	genome.wustl.edu	37	6	131912640	131912640	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	6	131912640	131912640	G	A	SNP	MED23	ENST00000368058	human	ensembl	69_37n	-1	known	nonsense	c.3517	p.R1173*	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282	38	0	0.00	20	13	39.39	-	-	-
MLLT4	0	genome.wustl.edu	37	6	168352584	168352584	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	6	168352584	168352584	G	A	SNP	MLLT4	ENST00000366806	human	ensembl	69_37n	+1	known	missense	c.4529	p.S1510N	1.000	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	24	0	0.00	9	13	59.09	-	-	-
MXRA5	0	genome.wustl.edu	37	X	3238221	3238221	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	3238221	3238221	C	A	SNP	MXRA5	ENST00000217939	human	ensembl	69_37n	-1	known	missense	c.5505	p.K1835N	0.234	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	MXRA5	HGNC	ENSG00000101825	66	0	0.00	59	23	28.05	-	-	-
MYO1C	0	genome.wustl.edu	37	17	1374587	1374587	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	17	1374587	1374587	G	A	SNP	MYO1C	ENST00000359786	human	ensembl	69_37n	-1	known	missense	c.2065	p.R689W	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1C	HGNC	ENSG00000197879	27	0	0.00	6	8	57.14	-	-	-
NLGN4X	0	genome.wustl.edu	37	X	5811184	5811184	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	5811184	5811184	T	A	SNP	NLGN4X	ENST00000381093	human	ensembl	69_37n	-1	known	missense	c.2185	p.R729W	0.452	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938	135	0	0.00	75	34	31.19	-	-	-
NUDT12	0	genome.wustl.edu	37	5	102888118	102888118	+	Splice_Site	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	5	102888118	102888118	C	T	SNP	NUDT12	ENST00000230792	human	ensembl	69_37n	-1	known	splice_site	c.1079-1	e5-1	1.000	-	-	-	no_errors	NUDT12	HGNC	ENSG00000112874	198	0	0.00	125	46	26.90	-	-	-
OR4C15	0	genome.wustl.edu	37	11	55322666	55322666	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	11	55322666	55322666	C	A	SNP	OR4C15	ENST00000314644	human	ensembl	69_37n	+1	known	missense	c.884	p.S295Y	0.998	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	177	0	0.00	124	49	28.32	-	-	-
PCBP2	0	genome.wustl.edu	37	12	53856277	53856278	+	Frame_Shift_Ins	INS	-	-	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	12	53856277	53856278	-	C	INS	PCBP2	ENST00000546463	human	ensembl	69_37n	+1	known	frame_shift_ins	c.505_506	p.K172fs	1.000:1.000	NULL	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP2	HGNC	ENSG00000197111	45	0	0.00	38	12	24.00	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	81	0	0.00	62	23	27.06	-	-	-
PKD1L3	0	genome.wustl.edu	37	16	71967361	71967361	+	RNA	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	16	71967361	71967361	C	T	SNP	PKD1L3	ENST00000335106	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	PKD1L3	HGNC	ENSG00000187008	49	0	0.00	48	9	15.79	-	-	-
PNLDC1	0	genome.wustl.edu	37	6	160232782	160232782	+	Silent	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	6	160232782	160232782	C	T	SNP	PNLDC1	ENST00000275275	human	ensembl	69_37n	+1	known	silent	c.870	p.L290	1.000	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	PNLDC1	HGNC	ENSG00000146453	114	0	0.00	53	71	57.26	-	-	-
RPS4X	0	genome.wustl.edu	37	X	71494957	71494957	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	71494957	71494957	G	C	SNP	RPS4X	ENST00000316084	human	ensembl	69_37n	-1	known	missense	c.306	p.I102M	1.000	pfam_Ribosomal_S4e_central,smart_S4_RNA-bd,pirsf_Ribosomal_S4e,pfscan_S4_RNA-bd	pfam_Ribosomal_S4e_central,pfam_Ribosomal_S4e_N,pfam_S4_RNA-bd,pfam_KOW,smart_S4_RNA-bd,pirsf_Ribosomal_S4e,pfscan_S4_RNA-bd	-	no_errors	RPS4X	HGNC	ENSG00000198034	120	0	0.00	77	29	27.36	-	-	-
SEC23IP	0	genome.wustl.edu	37	10	121663612	121663612	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	10	121663612	121663612	G	C	SNP	SEC23IP	ENST00000369075	human	ensembl	69_37n	+1	known	missense	c.924	p.E308D	1.000	NULL	pfam_DDHD,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_DDHD	-	no_errors	SEC23IP	HGNC	ENSG00000107651	79	0	0.00	67	15	18.29	-	-	-
SLFN14	0	genome.wustl.edu	37	17	33875444	33875444	+	Silent	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	17	33875444	33875444	C	T	SNP	SLFN14	ENST00000415846	human	ensembl	69_37n	-1	known	silent	c.2553	p.P851	0.011	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFN14	HGNC	ENSG00000236320	53	0	0.00	52	25	32.47	-	-	-
SMG1	0	genome.wustl.edu	37	16	18839447	18839447	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	16	18839447	18839447	G	T	SNP	SMG1	ENST00000389467	human	ensembl	69_37n	-1	known	nonsense	c.9650	p.S3217*	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	89	0	0.00	66	21	24.14	-	-	-
SORL1	0	genome.wustl.edu	37	11	121393316	121393316	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	11	121393316	121393316	C	T	SNP	SORL1	ENST00000260197	human	ensembl	69_37n	+1	known	missense	c.1426	p.H476Y	1.000	smart_VPS10	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	78	0	0.00	62	22	26.19	-	-	-
TREML3P	0	genome.wustl.edu	37	6	41185458	41185458	+	RNA	SNP	A	A	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	6	41185458	41185458	A	C	SNP	TREML3P	ENST00000564680	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TREML3P	HGNC	ENSG00000184106	11	0	0.00	10	5	33.33	-	-	-
VPRBP	0	genome.wustl.edu	37	3	51458364	51458364	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	3	51458364	51458364	T	C	SNP	VPRBP	ENST00000335891	human	ensembl	69_37n	-1	known	missense	c.713	p.N238S	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC	ENSG00000145041	65	0	0.00	50	13	20.63	-	-	-
WEE1	0	genome.wustl.edu	37	11	9608368	9608368	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	11	9608368	9608368	G	T	SNP	WEE1	ENST00000450114	human	ensembl	69_37n	+1	known	missense	c.1752	p.L584F	1.000	superfamily_Kinase-like_dom,pirsf_Wee1-like_protein_kinase	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Wee1-like_protein_kinase,pfscan_Prot_kinase_cat_dom	-	no_errors	WEE1	HGNC	ENSG00000166483	31	0	0.00	25	4	13.79	-	-	-
XPC	0	genome.wustl.edu	37	3	14197851	14197851	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	3	14197851	14197851	C	T	SNP	XPC	ENST00000285021	human	ensembl	69_37n	-1	known	missense	c.2017	p.E673K	1.000	pfam_Rad4_beta-hairpin_dom1,tigrfam_DNA_repair_Rad4_subgr	pfam_Rad4/PNGase_transGLS-fold,pfam_Rad4_beta-hairpin_dom3,pfam_Rad4_beta-hairpin_dom2,pfam_Rad4_beta-hairpin_dom1,tigrfam_DNA_repair_Rad4_subgr	-	no_errors	XPC	HGNC	ENSG00000154767	59	0	0.00	42	14	25.00	-	-	-
ZBTB4	0	genome.wustl.edu	37	17	7370012	7370012	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	17	7370012	7370012	C	T	SNP	ZBTB4	ENST00000311403	human	ensembl	69_37n	-1	known	missense	c.109	p.G37R	0.992	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB4	HGNC	ENSG00000174282	52	0	0.00	27	20	42.55	-	-	-
ZFP14	0	genome.wustl.edu	37	19	36832278	36832278	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	19	36832278	36832278	C	T	SNP	ZFP14	ENST00000270001	human	ensembl	69_37n	-1	known	missense	c.450	p.M150I	0.009	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP14	HGNC	ENSG00000142065	73	0	0.00	52	20	27.78	-	-	-
ZMYM3	0	genome.wustl.edu	37	X	70462884	70462884	+	Silent	SNP	G	G	A			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	X	70462884	70462884	G	A	SNP	ZMYM3	ENST00000373988	human	ensembl	69_37n	-1	known	silent	c.3489	p.Y1163	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH	-	no_errors	ZMYM3	HGNC	ENSG00000147130	151	1	0.66	119	27	18.37	-	-	-
ZNF733P	0	genome.wustl.edu	37	7	62758740	62758740	+	RNA	SNP	C	C	T			TCGA-D8-A1XM-01A-21D-A14K-09	TCGA-D8-A1XM-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	07418962-0a82-43a2-a66f-614903ea8380	647a05dc-3959-4997-a775-7b6a2c4cba59	7	62758740	62758740	C	T	SNP	ZNF733P	ENST00000331425	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.380	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037	168	0	0.00	132	27	16.98	-	-	-
