Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ALOX12B	0	genome.wustl.edu	37	17	7989371	7989371	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	17	7989371	7989371	C	T	SNP	ALOX12B	ENST00000319144	human	ensembl	69_37n	-1	known	missense	c.315	p.M105I	0.947	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477	66	0	0.00	89	67	42.95	-	-	-
ALOX12B	0	genome.wustl.edu	37	17	7989371	7989371	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	17	7989371	7989371	C	T	SNP	ALOX12B	ENST00000319144	human	ensembl	69_37n	-1	known	missense	c.315	p.M105I	0.947	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477	115	0	0.00	89	67	42.95	-	-	-
AMICA1	0	genome.wustl.edu	37	11	118081378	118081378	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	11	118081378	118081378	C	T	SNP	AMICA1	ENST00000356289	human	ensembl	69_37n	-1	known	missense	c.248	p.R83H	1.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	AMICA1	HGNC	ENSG00000160593	138	0	0.00	13	76	85.39	-	-	-
AMICA1	0	genome.wustl.edu	37	11	118081378	118081378	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	11	118081378	118081378	C	T	SNP	AMICA1	ENST00000356289	human	ensembl	69_37n	-1	known	missense	c.248	p.R83H	1.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	AMICA1	HGNC	ENSG00000160593	180	0	0.00	13	76	85.39	-	-	-
AP5B1	0	genome.wustl.edu	37	11	65546129	65546129	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	11	65546129	65546129	G	A	SNP	AP5B1	ENST00000532090	human	ensembl	69_37n	-1	novel	missense	c.1835	p.A612V	1.000	NULL	NULL	-	no_errors	AP5B1	HGNC	ENSG00000254470	12	0	0.00	7	4	36.36	-	-	-
ATAD2B	0	genome.wustl.edu	37	2	24118722	24118722	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	2	24118722	24118722	C	A	SNP	ATAD2B	ENST00000238789	human	ensembl	69_37n	-1	known	missense	c.335	p.R112L	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778	308	1	0.32	208	136	39.53	-	-	-
ATF5	0	genome.wustl.edu	37	19	50436338	50436338	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	19	50436338	50436338	C	T	SNP	ATF5	ENST00000423777	human	ensembl	69_37n	+1	known	missense	c.838	p.R280C	0.002	NULL	pfam_bZIP_1,pfam_bZIP_2,smart_bZIP,pfscan_bZIP	-	no_errors	ATF5	HGNC	ENSG00000169136	13	0	0.00	15	22	59.46	-	-	-
ATF5	0	genome.wustl.edu	37	19	50436338	50436338	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	19	50436338	50436338	C	T	SNP	ATF5	ENST00000423777	human	ensembl	69_37n	+1	known	missense	c.838	p.R280C	0.002	NULL	pfam_bZIP_1,pfam_bZIP_2,smart_bZIP,pfscan_bZIP	-	no_errors	ATF5	HGNC	ENSG00000169136	30	0	0.00	15	22	59.46	-	-	-
AZGP1	0	genome.wustl.edu	37	7	99573626	99573626	+	Silent	SNP	A	A	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	7	99573626	99573626	A	G	SNP	AZGP1	ENST00000292401	human	ensembl	69_37n	-1	known	silent	c.18	p.P6	0.646	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like,prints_MHC_I_a_a1/a2	-	no_errors	AZGP1	HGNC	ENSG00000160862	173	0	0.00	147	129	46.74	-	-	-
AZGP1	0	genome.wustl.edu	37	7	99573626	99573626	+	Silent	SNP	A	A	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	7	99573626	99573626	A	G	SNP	AZGP1	ENST00000292401	human	ensembl	69_37n	-1	known	silent	c.18	p.P6	0.646	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like,prints_MHC_I_a_a1/a2	-	no_errors	AZGP1	HGNC	ENSG00000160862	309	0	0.00	147	129	46.74	-	-	-
CCNB1	0	genome.wustl.edu	37	5	68470891	68470891	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	5	68470891	68470891	G	T	SNP	CCNB1	ENST00000256442	human	ensembl	69_37n	+1	known	missense	c.893	p.G298V	0.999	superfamily_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNB1	HGNC	ENSG00000134057	230	2	0.86	84	81	49.09	-	-	-
CCNB1	0	genome.wustl.edu	37	5	68470891	68470891	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	5	68470891	68470891	G	T	SNP	CCNB1	ENST00000256442	human	ensembl	69_37n	+1	known	missense	c.893	p.G298V	0.999	superfamily_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNB1	HGNC	ENSG00000134057	162	0	0.00	84	81	49.09	-	-	-
CDC42BPG	0	genome.wustl.edu	37	11	64600178	64600178	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	11	64600178	64600178	C	T	SNP	CDC42BPG	ENST00000342711	human	ensembl	69_37n	-1	known	missense	c.2903	p.R968H	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_PAK_box_Rho-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	57	0	0.00	23	19	45.24	-	-	-
CDH9	0	genome.wustl.edu	37	5	26906161	26906161	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	5	26906161	26906161	C	T	SNP	CDH9	ENST00000231021	human	ensembl	69_37n	-1	known	missense	c.718	p.D240N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100	613	1	0.16	286	203	41.51	-	-	-
CDH9	0	genome.wustl.edu	37	5	26906161	26906161	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	5	26906161	26906161	C	T	SNP	CDH9	ENST00000231021	human	ensembl	69_37n	-1	known	missense	c.718	p.D240N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100	520	0	0.00	286	203	41.51	-	-	-
COL4A1	0	genome.wustl.edu	37	13	110850853	110850853	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	13	110850853	110850853	G	A	SNP	COL4A1	ENST00000375820	human	ensembl	69_37n	-1	known	missense	c.1246	p.P416S	0.913	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498	24	0	0.00	20	8	28.57	-	-	-
COL4A1	0	genome.wustl.edu	37	13	110850853	110850853	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	13	110850853	110850853	G	A	SNP	COL4A1	ENST00000375820	human	ensembl	69_37n	-1	known	missense	c.1246	p.P416S	0.913	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498	35	0	0.00	20	8	28.57	-	-	-
CRTAP	0	genome.wustl.edu	37	3	33175699	33175699	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	3	33175699	33175699	C	T	SNP	CRTAP	ENST00000320954	human	ensembl	69_37n	+1	known	missense	c.1094	p.T365I	1.000	NULL	NULL	-	no_errors	CRTAP	HGNC	ENSG00000170275	425	3	0.70	236	183	43.68	-	-	-
CRTAP	0	genome.wustl.edu	37	3	33175699	33175699	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	3	33175699	33175699	C	T	SNP	CRTAP	ENST00000320954	human	ensembl	69_37n	+1	known	missense	c.1094	p.T365I	1.000	NULL	NULL	-	no_errors	CRTAP	HGNC	ENSG00000170275	389	0	0.00	236	183	43.68	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34191137	34191137	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	1	34191137	34191137	T	G	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.2508	p.R836S	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	173	0	0.00	69	67	49.26	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34191137	34191137	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	1	34191137	34191137	T	G	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.2508	p.R836S	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	130	0	0.00	69	67	49.26	-	-	-
CTIF	0	genome.wustl.edu	37	18	46284669	46284669	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	18	46284669	46284669	G	C	SNP	CTIF	ENST00000382998	human	ensembl	69_37n	+1	known	missense	c.964	p.E322Q	0.660	NULL	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	CTIF	HGNC	ENSG00000134030	15	0	0.00	9	10	52.63	-	-	-
CTIF	0	genome.wustl.edu	37	18	46284669	46284669	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	18	46284669	46284669	G	C	SNP	CTIF	ENST00000382998	human	ensembl	69_37n	+1	known	missense	c.964	p.E322Q	0.660	NULL	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	CTIF	HGNC	ENSG00000134030	31	0	0.00	9	10	52.63	-	-	-
CTNNAL1	0	genome.wustl.edu	37	9	111735100	111735100	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	9	111735100	111735100	G	T	SNP	CTNNAL1	ENST00000325551	human	ensembl	69_37n	-1	known	missense	c.1202	p.A401E	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	-	no_errors	CTNNAL1	HGNC	ENSG00000119326	84	0	0.00	50	29	36.25	-	-	-
CTNNAL1	0	genome.wustl.edu	37	9	111735100	111735100	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	9	111735100	111735100	G	T	SNP	CTNNAL1	ENST00000325551	human	ensembl	69_37n	-1	known	missense	c.1202	p.A401E	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	-	no_errors	CTNNAL1	HGNC	ENSG00000119326	81	0	0.00	50	29	36.25	-	-	-
DNAH5	0	genome.wustl.edu	37	5	13759060	13759060	+	Silent	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	5	13759060	13759060	G	A	SNP	DNAH5	ENST00000265104	human	ensembl	69_37n	-1	known	silent	c.10314	p.L3438	0.005	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	95	0	0.00	93	99	51.56	-	-	-
DNAH5	0	genome.wustl.edu	37	5	13759060	13759060	+	Silent	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	5	13759060	13759060	G	A	SNP	DNAH5	ENST00000265104	human	ensembl	69_37n	-1	known	silent	c.10314	p.L3438	0.005	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	184	0	0.00	93	99	51.56	-	-	-
DOT1L	0	genome.wustl.edu	37	19	2213589	2213589	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	19	2213589	2213589	C	G	SNP	DOT1L	ENST00000398665	human	ensembl	69_37n	+1	known	missense	c.1609	p.Q537E	1.000	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885	113	0	0.00	108	97	47.32	-	-	-
DOT1L	0	genome.wustl.edu	37	19	2213589	2213589	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	19	2213589	2213589	C	G	SNP	DOT1L	ENST00000398665	human	ensembl	69_37n	+1	known	missense	c.1609	p.Q537E	1.000	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885	167	1	0.60	108	97	47.32	-	-	-
DSCAM	0	genome.wustl.edu	37	21	41719610	41719610	+	Silent	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	21	41719610	41719610	C	T	SNP	DSCAM	ENST00000400454	human	ensembl	69_37n	-1	known	silent	c.1197	p.Q399	0.996	smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DSCAM	HGNC	ENSG00000171587	176	1	0.56	134	115	46.18	-	-	-
DSCAM	0	genome.wustl.edu	37	21	41719610	41719610	+	Silent	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	21	41719610	41719610	C	T	SNP	DSCAM	ENST00000400454	human	ensembl	69_37n	-1	known	silent	c.1197	p.Q399	0.996	smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DSCAM	HGNC	ENSG00000171587	228	0	0.00	134	115	46.18	-	-	-
EIF3H	0	genome.wustl.edu	37	8	117671073	117671073	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	8	117671073	117671073	C	A	SNP	EIF3H	ENST00000521861	human	ensembl	69_37n	-1	known	nonsense	c.436	p.E146*	1.000	smart_JAB1_Mov34_MPN_PAD1	pfam_JAB1_Mov34_MPN_PAD1,smart_JAB1_Mov34_MPN_PAD1	-	no_errors	EIF3H	HGNC	ENSG00000147677	162	1	0.61	76	71	48.30	-	-	-
EIF3H	0	genome.wustl.edu	37	8	117671073	117671073	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	8	117671073	117671073	C	A	SNP	EIF3H	ENST00000521861	human	ensembl	69_37n	-1	known	nonsense	c.436	p.E146*	1.000	smart_JAB1_Mov34_MPN_PAD1	pfam_JAB1_Mov34_MPN_PAD1,smart_JAB1_Mov34_MPN_PAD1	-	no_errors	EIF3H	HGNC	ENSG00000147677	125	1	0.79	76	71	48.30	-	-	-
ELAC2	0	genome.wustl.edu	37	17	12913975	12913975	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	17	12913975	12913975	T	C	SNP	ELAC2	ENST00000446899	human	ensembl	69_37n	-1	putative	missense	c.22	p.K8E	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon	ELAC2	HGNC	ENSG00000006744	127	0	0.00	81	56	40.88	-	-	-
FGFR2	0	genome.wustl.edu	37	10	123258034	123258034	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	10	123258034	123258034	A	T	SNP	FGFR2	ENST00000457416	human	ensembl	69_37n	-1	known	missense	c.1650	p.N550K	1.000	pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468	456	0	0.00	226	177	43.92	-	-	-
FGFR2	0	genome.wustl.edu	37	10	123258034	123258034	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	10	123258034	123258034	A	T	SNP	FGFR2	ENST00000457416	human	ensembl	69_37n	-1	known	missense	c.1650	p.N550K	1.000	pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468	463	0	0.00	226	177	43.92	-	-	-
FN1	0	genome.wustl.edu	37	2	216288147	216288147	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	2	216288147	216288147	C	A	SNP	FN1	ENST00000354785	human	ensembl	69_37n	-1	known	missense	c.1319	p.R440I	0.999	pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	261	0	0.00	154	143	48.15	-	-	-
GCN1L1	0	genome.wustl.edu	37	12	120602272	120602272	+	Silent	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	12	120602272	120602272	C	A	SNP	GCN1L1	ENST00000300648	human	ensembl	69_37n	-1	known	silent	c.1716	p.V572	0.963	pfam_DUF3554,superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154	38	0	0.00	23	22	48.89	-	-	-
GCN1L1	0	genome.wustl.edu	37	12	120602272	120602272	+	Silent	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	12	120602272	120602272	C	A	SNP	GCN1L1	ENST00000300648	human	ensembl	69_37n	-1	known	silent	c.1716	p.V572	0.963	pfam_DUF3554,superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154	56	0	0.00	23	22	48.89	-	-	-
GNAS	0	genome.wustl.edu	37	20	57484421	57484421	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	20	57484421	57484421	G	A	SNP	GNAS	ENST00000354359	human	ensembl	69_37n	+1	known	missense	c.605	p.R202H	1.000	pfam_Gprotein_alpha_su,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	150	0	0.00	93	86	48.04	-	-	-
GNAS	0	genome.wustl.edu	37	20	57484421	57484421	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	20	57484421	57484421	G	A	SNP	GNAS	ENST00000354359	human	ensembl	69_37n	+1	known	missense	c.605	p.R202H	1.000	pfam_Gprotein_alpha_su,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	156	0	0.00	93	86	48.04	-	-	-
HRNR	0	genome.wustl.edu	37	1	152193787	152193787	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	1	152193787	152193787	G	C	SNP	HRNR	ENST00000368801	human	ensembl	69_37n	-1	known	missense	c.318	p.H106Q	0.067	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC	ENSG00000197915	642	0	0.00	551	183	24.90	-	-	-
HRNR	0	genome.wustl.edu	37	1	152193787	152193787	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	1	152193787	152193787	G	C	SNP	HRNR	ENST00000368801	human	ensembl	69_37n	-1	known	missense	c.318	p.H106Q	0.067	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC	ENSG00000197915	552	0	0.00	551	183	24.90	-	-	-
IPO13	0	genome.wustl.edu	37	1	44426575	44426575	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	1	44426575	44426575	G	T	SNP	IPO13	ENST00000372343	human	ensembl	69_37n	+1	known	missense	c.2137	p.V713F	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO13	HGNC	ENSG00000117408	89	0	0.00	71	56	44.09	-	-	-
IPO13	0	genome.wustl.edu	37	1	44426575	44426575	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	1	44426575	44426575	G	T	SNP	IPO13	ENST00000372343	human	ensembl	69_37n	+1	known	missense	c.2137	p.V713F	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO13	HGNC	ENSG00000117408	121	0	0.00	71	56	44.09	-	-	-
KDR	0	genome.wustl.edu	37	4	55955083	55955083	+	Silent	SNP	T	T	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	4	55955083	55955083	T	A	SNP	KDR	ENST00000263923	human	ensembl	69_37n	-1	known	silent	c.3462	p.S1154	0.995	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR2_rcpt,prints_Tyr_kinase_VEGFR_rcpt_N	-	no_errors	KDR	HGNC	ENSG00000128052	236	0	0.00	185	38	17.04	-	-	-
KDR	0	genome.wustl.edu	37	4	55955083	55955083	+	Silent	SNP	T	T	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	4	55955083	55955083	T	A	SNP	KDR	ENST00000263923	human	ensembl	69_37n	-1	known	silent	c.3462	p.S1154	0.995	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR2_rcpt,prints_Tyr_kinase_VEGFR_rcpt_N	-	no_errors	KDR	HGNC	ENSG00000128052	237	0	0.00	185	38	17.04	-	-	-
KLRC2	0	genome.wustl.edu	37	12	10586464	10586466	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	12	10586464	10586466	TTC	-	DEL	KLRC2	ENST00000381901	human	ensembl	69_37n	-1	known	in_frame_del	c.409_407	p.R136in_frame_del	0.001:0.009:0.008	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRC2	HGNC	ENSG00000205809	600	0	0.00	198	119	37.19	-	-	-
KLRC2	0	genome.wustl.edu	37	12	10586464	10586466	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	12	10586464	10586466	TTC	-	DEL	KLRC2	ENST00000381901	human	ensembl	69_37n	-1	known	in_frame_del	c.409_407	p.R136in_frame_del	0.001:0.009:0.008	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRC2	HGNC	ENSG00000205809	472	0	0.00	198	119	37.19	-	-	-
KRT82	0	genome.wustl.edu	37	12	52797575	52797575	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	12	52797575	52797575	C	T	SNP	KRT82	ENST00000257974	human	ensembl	69_37n	-1	known	missense	c.530	p.R177Q	1.000	pfam_F	pfam_F,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT82	HGNC	ENSG00000161850	21	0	0.00	19	13	40.62	-	-	-
KRT82	0	genome.wustl.edu	37	12	52797575	52797575	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	12	52797575	52797575	C	T	SNP	KRT82	ENST00000257974	human	ensembl	69_37n	-1	known	missense	c.530	p.R177Q	1.000	pfam_F	pfam_F,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT82	HGNC	ENSG00000161850	37	0	0.00	19	13	40.62	-	-	-
L3MBTL3	0	genome.wustl.edu	37	6	130407393	130407393	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	6	130407393	130407393	A	G	SNP	L3MBTL3	ENST00000361794	human	ensembl	69_37n	+1	known	missense	c.1516	p.K506E	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL3	HGNC	ENSG00000198945	284	0	0.00	136	98	41.70	-	-	-
MAGI1	0	genome.wustl.edu	37	3	65346921	65346921	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	3	65346921	65346921	C	T	SNP	MAGI1	ENST00000402939	human	ensembl	69_37n	-1	known	missense	c.3587	p.R1196K	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI1	HGNC	ENSG00000151276	271	1	0.37	126	129	50.59	-	-	-
MAGI1	0	genome.wustl.edu	37	3	65346921	65346921	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	3	65346921	65346921	C	T	SNP	MAGI1	ENST00000402939	human	ensembl	69_37n	-1	known	missense	c.3587	p.R1196K	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI1	HGNC	ENSG00000151276	277	0	0.00	126	129	50.59	-	-	-
MAZ	0	genome.wustl.edu	37	16	29821425	29821425	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	16	29821425	29821425	C	T	SNP	MAZ	ENST00000322945	human	ensembl	69_37n	+1	known	missense	c.1307	p.A436V	0.930	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	MAZ	HGNC	ENSG00000103495	9	0	0.00	19	46	58.97	-	-	-
MAZ	0	genome.wustl.edu	37	16	29821425	29821425	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	16	29821425	29821425	C	T	SNP	MAZ	ENST00000322945	human	ensembl	69_37n	+1	known	missense	c.1307	p.A436V	0.930	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	MAZ	HGNC	ENSG00000103495	23	0	0.00	19	46	58.97	-	-	-
MBD1	0	genome.wustl.edu	37	18	47802228	47802228	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	18	47802228	47802228	G	A	SNP	MBD1	ENST00000424334	human	ensembl	69_37n	-1	known	missense	c.718	p.R240C	1.000	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_Znf_CXXC,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_integrase-typ,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_CXXC	-	no_errors	MBD1	HGNC	ENSG00000141644	100	0	0.00	104	58	35.80	-	-	-
MBD1	0	genome.wustl.edu	37	18	47802228	47802228	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	18	47802228	47802228	G	A	SNP	MBD1	ENST00000424334	human	ensembl	69_37n	-1	known	missense	c.718	p.R240C	1.000	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_Znf_CXXC,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_integrase-typ,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_CXXC	-	no_errors	MBD1	HGNC	ENSG00000141644	184	0	0.00	104	58	35.80	-	-	-
MLIP	0	genome.wustl.edu	37	6	53883886	53883886	+	Silent	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	6	53883886	53883886	G	T	SNP	MLIP	ENST00000274897	human	ensembl	69_37n	+1	known	silent	c.60	p.L20	0.793	NULL	NULL	-	no_errors	MLIP	HGNC	ENSG00000146147	320	2	0.62	90	63	41.18	-	-	-
MLIP	0	genome.wustl.edu	37	6	53883886	53883886	+	Silent	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	6	53883886	53883886	G	T	SNP	MLIP	ENST00000274897	human	ensembl	69_37n	+1	known	silent	c.60	p.L20	0.793	NULL	NULL	-	no_errors	MLIP	HGNC	ENSG00000146147	200	0	0.00	90	63	41.18	-	-	-
MUC12	0	genome.wustl.edu	37	7	100641723	100641723	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	7	100641723	100641723	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.8308	p.R2770C	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	79	0	0.00	52	14	21.21	-	-	-
MUC12	0	genome.wustl.edu	37	7	100641723	100641723	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	7	100641723	100641723	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.8308	p.R2770C	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	108	0	0.00	52	14	21.21	-	-	-
MYH10	0	genome.wustl.edu	37	17	8415888	8415888	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	17	8415888	8415888	C	G	SNP	MYH10	ENST00000396239	human	ensembl	69_37n	-1	known	missense	c.2803	p.A935P	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026	240	0	0.00	98	74	43.02	-	-	-
MYH10	0	genome.wustl.edu	37	17	8415888	8415888	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	17	8415888	8415888	C	G	SNP	MYH10	ENST00000396239	human	ensembl	69_37n	-1	known	missense	c.2803	p.A935P	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026	205	0	0.00	98	74	43.02	-	-	-
MYH8	0	genome.wustl.edu	37	17	10304870	10304870	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	17	10304870	10304870	G	C	SNP	MYH8	ENST00000403437	human	ensembl	69_37n	-1	known	missense	c.2921	p.T974R	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	856	1	0.12	345	331	48.96	-	-	-
MYH8	0	genome.wustl.edu	37	17	10304870	10304870	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	17	10304870	10304870	G	C	SNP	MYH8	ENST00000403437	human	ensembl	69_37n	-1	known	missense	c.2921	p.T974R	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	740	0	0.00	345	331	48.96	-	-	-
NAALADL2	0	genome.wustl.edu	37	3	175189546	175189546	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	3	175189546	175189546	G	T	SNP	NAALADL2	ENST00000454872	human	ensembl	69_37n	+1	known	missense	c.1653	p.E551D	1.000	NULL	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694	225	1	0.44	69	48	41.03	-	-	-
NAALADL2	0	genome.wustl.edu	37	3	175189546	175189546	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	3	175189546	175189546	G	T	SNP	NAALADL2	ENST00000454872	human	ensembl	69_37n	+1	known	missense	c.1653	p.E551D	1.000	NULL	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694	138	0	0.00	69	48	41.03	-	-	-
NFATC4	0	genome.wustl.edu	37	14	24845738	24845738	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	14	24845738	24845738	C	-	DEL	NFATC4	ENST00000413692	human	ensembl	69_37n	+1	known	frame_shift_del	c.2484	p.P829fs	1.000	NULL	pfam_RHD,pfam_IPT_TIG_rcpt,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968	98	0	0.00	53	27	33.33	-	-	-
NUP155	0	genome.wustl.edu	37	5	37349297	37349298	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	5	37349297	37349298	GT	-	DEL	NUP155	ENST00000231498	human	ensembl	69_37n	-1	known	frame_shift_del	c.880_879	p.R294fs	1.000:0.972	pfam_Nucleoporin_Nup133/Nup155_N,superfamily_WD40_repeat_dom	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N,superfamily_WD40_repeat_dom	-	no_errors	NUP155	HGNC	ENSG00000113569	90	0	0.00	17	2	10.53	-	-	-
OR51E2	0	genome.wustl.edu	37	11	4703745	4703745	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	11	4703745	4703745	G	C	SNP	OR51E2	ENST00000396950	human	ensembl	69_37n	-1	known	missense	c.197	p.A66G	0.998	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR51E2	HGNC	ENSG00000167332	132	0	0.00	65	73	52.52	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	203	1	0.49	99	104	51.23	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	158	0	0.00	99	104	51.23	-	-	-
PIK3R3	0	genome.wustl.edu	37	1	46512262	46512262	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	1	46512262	46512262	A	C	SNP	PIK3R3	ENST00000540385	human	ensembl	69_37n	-1	known	missense	c.1115	p.L372R	1.000	prints_PI3kinase_P85	pfam_SH2,smart_SH2,pfscan_SH2,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R3	HGNC	ENSG00000117461	351	3	0.85	173	160	48.05	-	-	-
PIK3R3	0	genome.wustl.edu	37	1	46512262	46512262	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	1	46512262	46512262	A	C	SNP	PIK3R3	ENST00000540385	human	ensembl	69_37n	-1	known	missense	c.1115	p.L372R	1.000	prints_PI3kinase_P85	pfam_SH2,smart_SH2,pfscan_SH2,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R3	HGNC	ENSG00000117461	299	0	0.00	173	160	48.05	-	-	-
PIWIL2	0	genome.wustl.edu	37	8	22146119	22146120	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	8	22146119	22146120	-	A	INS	PIWIL2	ENST00000356766	human	ensembl	69_37n	+1	known	frame_shift_ins	c.926_927	p.I311fs	1.000:0.988	superfamily_PAZ	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	300	2	0.66	28	94	77.05	-	-	-
PIWIL2	0	genome.wustl.edu	37	8	22146119	22146120	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	8	22146119	22146120	-	A	INS	PIWIL2	ENST00000356766	human	ensembl	69_37n	+1	known	frame_shift_ins	c.926_927	p.I311fs	1.000:0.988	superfamily_PAZ	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	264	0	0.00	28	94	77.05	-	-	-
RNU6-42	0	genome.wustl.edu	37	3	196511870	196511870	+	RNA	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	3	196511870	196511870	C	T	SNP	RNU6-42	ENST00000384165	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RNU6-42	HGNC	ENSG00000206892	10	0	0.00	16	6	27.27	-	-	-
SEZ6L2	0	genome.wustl.edu	37	16	29884037	29884037	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	16	29884037	29884037	C	T	SNP	SEZ6L2	ENST00000537485	human	ensembl	69_37n	-1	known	missense	c.2384	p.R795Q	1.000	NULL	pfam_Sushi_SCR_CCP,pfam_CUB,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L2	HGNC	ENSG00000174938	76	0	0.00	217	49	18.42	-	-	-
SEZ6L2	0	genome.wustl.edu	37	16	29884037	29884037	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	16	29884037	29884037	C	T	SNP	SEZ6L2	ENST00000537485	human	ensembl	69_37n	-1	known	missense	c.2384	p.R795Q	1.000	NULL	pfam_Sushi_SCR_CCP,pfam_CUB,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L2	HGNC	ENSG00000174938	120	0	0.00	217	49	18.42	-	-	-
SGOL2	0	genome.wustl.edu	37	2	201437004	201437004	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	2	201437004	201437004	T	-	DEL	SGOL2	ENST00000357799	human	ensembl	69_37n	+1	known	frame_shift_del	c.1935	p.F648fs	0.016	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535	37	0	0.00	4	2	33.33	-	-	-
SGOL2	0	genome.wustl.edu	37	2	201437004	201437004	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	2	201437004	201437004	T	-	DEL	SGOL2	ENST00000357799	human	ensembl	69_37n	+1	known	frame_shift_del	c.1935	p.F648fs	0.016	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535	12	0	0.00	4	2	33.33	-	-	-
SLC16A1	0	genome.wustl.edu	37	1	113456766	113456766	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	1	113456766	113456766	C	T	SNP	SLC16A1	ENST00000369626	human	ensembl	69_37n	-1	known	missense	c.1250	p.G417E	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A1	HGNC	ENSG00000155380	145	1	0.68	81	68	45.64	-	-	-
SLC16A1	0	genome.wustl.edu	37	1	113456766	113456766	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	1	113456766	113456766	C	T	SNP	SLC16A1	ENST00000369626	human	ensembl	69_37n	-1	known	missense	c.1250	p.G417E	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A1	HGNC	ENSG00000155380	127	0	0.00	81	68	45.64	-	-	-
SSX3	0	genome.wustl.edu	37	X	48214616	48214616	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	X	48214616	48214616	C	A	SNP	SSX3	ENST00000298396	human	ensembl	69_37n	-1	known	missense	c.69	p.K23N	0.036	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX3	HGNC	ENSG00000165584	922	2	0.22	519	430	45.31	-	-	-
SSX3	0	genome.wustl.edu	37	X	48214616	48214616	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	X	48214616	48214616	C	A	SNP	SSX3	ENST00000298396	human	ensembl	69_37n	-1	known	missense	c.69	p.K23N	0.036	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX3	HGNC	ENSG00000165584	884	0	0.00	519	430	45.31	-	-	-
TIMP3	0	genome.wustl.edu	37	22	33245467	33245467	+	Silent	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	22	33245467	33245467	G	A	SNP	TIMP3	ENST00000266085	human	ensembl	69_37n	+1	known	silent	c.150	p.K50	1.000	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP3	HGNC	ENSG00000100234	226	1	0.44	193	138	41.69	-	-	-
TIMP3	0	genome.wustl.edu	37	22	33245467	33245467	+	Silent	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	22	33245467	33245467	G	A	SNP	TIMP3	ENST00000266085	human	ensembl	69_37n	+1	known	silent	c.150	p.K50	1.000	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP3	HGNC	ENSG00000100234	288	0	0.00	193	138	41.69	-	-	-
TRAK1	0	genome.wustl.edu	37	3	42230525	42230525	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	3	42230525	42230525	C	T	SNP	TRAK1	ENST00000396175	human	ensembl	69_37n	+1	known	missense	c.425	p.S142L	0.993	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK1	HGNC	ENSG00000182606	182	1	0.55	123	80	39.02	-	-	-
ZNF675	0	genome.wustl.edu	37	19	23837311	23837311	+	Nonsense_Mutation	SNP	T	T	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	19	23837311	23837311	T	A	SNP	ZNF675	ENST00000359788	human	ensembl	69_37n	-1	known	nonsense	c.424	p.K142*	0.319	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF675	HGNC	ENSG00000197372	212	0	0.00	115	123	51.68	-	-	-
ZSCAN2	0	genome.wustl.edu	37	15	85164438	85164438	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	6c7d0beb-a20c-4cf8-8e52-2028a8620bb5	15	85164438	85164438	G	A	SNP	ZSCAN2	ENST00000448803	human	ensembl	69_37n	+1	known	missense	c.1012	p.E338K	0.726	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN2	HGNC	ENSG00000176371	128	1	0.78	59	40	40.40	-	-	-
ZSCAN2	0	genome.wustl.edu	37	15	85164438	85164438	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15K-06A-11D-A12Q-09	TCGA-E2-A15K-11A-13D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f39cc911-36a7-4c06-9e91-4ad86281db3d	26163687-7ede-43be-aeb7-21ad33133d45	15	85164438	85164438	G	A	SNP	ZSCAN2	ENST00000448803	human	ensembl	69_37n	+1	known	missense	c.1012	p.E338K	0.726	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN2	HGNC	ENSG00000176371	85	0	0.00	59	40	40.40	-	-	-
