Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABO	0	genome.wustl.edu	37	9	136131308	136131308	+	RNA	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	9	136131308	136131308	G	A	SNP	ABO	ENST00000453660	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	ABO	HGNC	ENSG00000175164	48	0	0.00	55	10	15.38	-	-	-
ACRBP	0	genome.wustl.edu	37	12	6756501	6756501	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	12	6756501	6756501	G	T	SNP	ACRBP	ENST00000229243	human	ensembl	69_37n	-1	known	nonsense	c.32	p.S11*	0.023	pfam_Proacrosin-bd	pfam_Proacrosin-bd	-	no_errors	ACRBP	HGNC	ENSG00000111644	46	0	0.00	23	13	36.11	-	-	-
ADAMTSL3	0	genome.wustl.edu	37	15	84651682	84651682	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	15	84651682	84651682	G	A	SNP	ADAMTSL3	ENST00000286744	human	ensembl	69_37n	+1	known	missense	c.3302	p.R1101K	0.228	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218	23	0	0.00	9	10	52.63	-	-	-
AGAP7	0	genome.wustl.edu	37	10	51465571	51465571	+	Silent	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	10	51465571	51465571	G	A	SNP	AGAP7	ENST00000374095	human	ensembl	69_37n	-1	known	silent	c.885	p.S295	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP7	HGNC	ENSG00000204169	135	0	0.00	116	26	18.31	-	-	-
ALMS1	0	genome.wustl.edu	37	2	73679504	73679504	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	73679504	73679504	C	G	SNP	ALMS1	ENST00000264448	human	ensembl	69_37n	+1	known	missense	c.5847	p.I1949M	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	39	0	0.00	15	21	58.33	-	-	-
AMPD3	0	genome.wustl.edu	37	11	10500163	10500163	+	Silent	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	11	10500163	10500163	G	A	SNP	AMPD3	ENST00000396553	human	ensembl	69_37n	+1	known	silent	c.312	p.P104	0.000	pirsf_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD3	HGNC	ENSG00000133805	41	0	0.00	28	10	26.32	-	-	-
ANKRD18DP	0	genome.wustl.edu	37	3	197785890	197785890	+	RNA	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	3	197785890	197785890	G	A	SNP	ANKRD18DP	ENST00000335478	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.149	-	-	-	no_errors	ANKRD18DP	HGNC	ENSG00000226435	88	0	0.00	46	21	31.34	-	-	-
ANKRD5	0	genome.wustl.edu	37	20	10025082	10025082	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	20	10025082	10025082	G	A	SNP	ANKRD5	ENST00000378380	human	ensembl	69_37n	+1	known	missense	c.587	p.G196E	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EF_HAND_2,prints_Ankyrin_rpt	-	no_errors	ANKRD5	HGNC	ENSG00000132623	34	0	0.00	28	13	30.23	-	-	-
ARHGAP25	0	genome.wustl.edu	37	2	69002532	69002532	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	69002532	69002532	G	A	SNP	ARHGAP25	ENST00000409202	human	ensembl	69_37n	+1	known	missense	c.241	p.E81K	0.996	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP25	HGNC	ENSG00000163219	44	0	0.00	42	8	16.00	-	-	-
ARMCX4	0	genome.wustl.edu	37	X	100747194	100747194	+	Silent	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	X	100747194	100747194	G	A	SNP	ARMCX4	ENST00000423738	human	ensembl	69_37n	+1	putative	silent	c.3618	p.K1206	0.653	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	46	0	0.00	28	10	26.32	-	-	-
BCOR	0	genome.wustl.edu	37	X	39933225	39933225	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	X	39933225	39933225	C	G	SNP	BCOR	ENST00000378444	human	ensembl	69_37n	-1	known	missense	c.1374	p.M458I	0.929	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337	46	0	0.00	18	8	30.77	-	-	-
C10orf112	0	genome.wustl.edu	37	10	20019712	20019712	+	Splice_Site	SNP	T	T	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	10	20019712	20019712	T	G	SNP	C10orf112	ENST00000454679	human	ensembl	69_37n	+1	known	splice_site	c.4341+2	e23+2	0.999	-	-	-	no_errors	C10orf112	HGNC	ENSG00000204740	33	0	0.00	28	11	28.21	-	-	-
C18orf54	0	genome.wustl.edu	37	18	51889270	51889270	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	18	51889270	51889270	G	T	SNP	C18orf54	ENST00000300091	human	ensembl	69_37n	+1	known	missense	c.719	p.W240L	1.000	NULL	NULL	-	no_errors	C18orf54	HGNC	ENSG00000166845	40	0	0.00	23	4	14.81	-	-	-
C20orf166	0	genome.wustl.edu	37	20	61167855	61167855	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	20	61167855	61167855	C	G	SNP	C20orf166	ENST00000370527	human	ensembl	69_37n	+1	known	missense	c.325	p.L109V	0.000	NULL	NULL	-	no_errors	C20orf166	HGNC	ENSG00000174407	39	0	0.00	20	6	23.08	-	-	-
CCBP2	0	genome.wustl.edu	37	3	42906330	42906330	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	3	42906330	42906330	C	A	SNP	CCBP2	ENST00000273145	human	ensembl	69_37n	+1	known	missense	c.336	p.F112L	0.821	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_ATII_rcpt,prints_Chemokine_CXCR4	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_ATII_rcpt,prints_Chemokine_CXCR4	-	no_errors	CCBP2	HGNC	ENSG00000144648	61	0	0.00	29	14	31.82	-	-	-
CLIP2	0	genome.wustl.edu	37	7	73753226	73753226	+	Silent	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	7	73753226	73753226	C	T	SNP	CLIP2	ENST00000223398	human	ensembl	69_37n	+1	known	silent	c.570	p.S190	0.994	superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665	46	0	0.00	36	16	30.77	-	-	-
COG7	0	genome.wustl.edu	37	16	23464305	23464305	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	16	23464305	23464305	G	A	SNP	COG7	ENST00000307149	human	ensembl	69_37n	-1	known	missense	c.11	p.S4F	1.000	pfam_COG_su7	pfam_COG_su7	-	no_errors	COG7	HGNC	ENSG00000168434	37	0	0.00	17	10	37.04	-	-	-
CROCCP3	0	genome.wustl.edu	37	1	16803524	16803524	+	RNA	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	16803524	16803524	G	A	SNP	CROCCP3	ENST00000263511	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.686	-	-	-	no_errors	CROCCP3	HGNC	ENSG00000080947	31	0	0.00	28	12	30.00	-	-	-
CRTC1	0	genome.wustl.edu	37	19	18888034	18888034	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	19	18888034	18888034	G	A	SNP	CRTC1	ENST00000338797	human	ensembl	69_37n	+1	known	missense	c.1795	p.G599R	1.000	NULL	NULL	-	no_errors	CRTC1	HGNC	ENSG00000105662	34	0	0.00	47	6	11.11	-	-	-
CUBN	0	genome.wustl.edu	37	10	16882890	16882890	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	10	16882890	16882890	T	C	SNP	CUBN	ENST00000377833	human	ensembl	69_37n	-1	known	missense	c.9820	p.M3274V	0.016	superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_CUB,superfamily_Growth_fac_rcpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_CUB,pfscan_CUB,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	113	0	0.00	55	22	28.57	-	-	-
EEF1A1	0	genome.wustl.edu	37	6	74227973	74227973	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	6	74227973	74227973	G	T	SNP	EEF1A1	ENST00000309268	human	ensembl	69_37n	-1	known	missense	c.1044	p.N348K	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C,tigrfam_Transl_elong_EF1A_euk/arc	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd,tigrfam_Transl_elong_EF1A_euk/arc	-	no_errors	EEF1A1	HGNC	ENSG00000156508	65	0	0.00	38	6	13.64	-	-	-
EXOC4	0	genome.wustl.edu	37	7	133059629	133059629	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	7	133059629	133059629	T	A	SNP	EXOC4	ENST00000253861	human	ensembl	69_37n	+1	known	missense	c.1055	p.V352E	1.000	NULL	pfam_Sec8_exocyst	-	no_errors	EXOC4	HGNC	ENSG00000131558	29	0	0.00	17	15	46.88	-	-	-
FAT3	0	genome.wustl.edu	37	11	92532481	92532481	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	11	92532481	92532481	C	A	SNP	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	missense	c.6302	p.T2101N	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	44	0	0.00	26	9	25.71	-	-	-
FAT3	0	genome.wustl.edu	37	11	92532610	92532610	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	11	92532610	92532610	C	T	SNP	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	missense	c.6431	p.A2144V	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	39	0	0.00	21	5	19.23	-	-	-
FAT4	0	genome.wustl.edu	37	4	126237642	126237642	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	4	126237642	126237642	C	T	SNP	FAT4	ENST00000394329	human	ensembl	69_37n	+1	known	nonsense	c.76	p.R26*	0.007	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	43	0	0.00	49	11	18.33	-	-	-
FBXL3	0	genome.wustl.edu	37	13	77581590	77581590	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	13	77581590	77581590	C	T	SNP	FBXL3	ENST00000355619	human	ensembl	69_37n	-1	known	missense	c.977	p.R326H	1.000	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like	-	no_errors	FBXL3	HGNC	ENSG00000005812	30	0	0.00	12	14	53.85	-	-	-
FLJ10661	0	genome.wustl.edu	37	8	8092025	8092025	+	RNA	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	8	8092025	8092025	G	A	SNP	FLJ10661	ENST00000522601	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-556O5.3	Clone_based_vega_gene	ENSG00000173295	92	0	0.00	40	7	14.89	-	-	-
FLJ43860	0	genome.wustl.edu	37	8	142458028	142458028	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	8	142458028	142458028	G	C	SNP	FLJ43860	ENST00000430863	human	ensembl	69_37n	-1	known	missense	c.2798	p.A933G	0.000	NULL	NULL	-	pseudogene	AC100803.1	Clone_based_vega_gene	ENSG00000226807	52	0	0.00	79	17	17.71	-	-	-
FSHR	0	genome.wustl.edu	37	2	49191057	49191057	+	Silent	SNP	A	A	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	49191057	49191057	A	C	SNP	FSHR	ENST00000406846	human	ensembl	69_37n	-1	known	silent	c.903	p.V301	0.226	pfam_GnHR_TM	pfam_7TM_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_supfam,prints_FSH_rcpt,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820	39	0	0.00	17	14	45.16	-	-	-
GFPT2	0	genome.wustl.edu	37	5	179731847	179731847	+	Silent	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	179731847	179731847	G	T	SNP	GFPT2	ENST00000253778	human	ensembl	69_37n	-1	known	silent	c.1767	p.P589	0.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459	39	0	0.00	23	17	42.50	-	-	-
GON4L	0	genome.wustl.edu	37	1	155791266	155791266	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	155791266	155791266	A	C	SNP	GON4L	ENST00000368331	human	ensembl	69_37n	-1	known	missense	c.962	p.F321C	1.000	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	48	0	0.00	27	15	35.71	-	-	-
IGDCC4	0	genome.wustl.edu	37	15	65674097	65674097	+	RNA	SNP	A	A	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	15	65674097	65674097	A	G	SNP	IGDCC4	ENST00000558048	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.887	-	-	-	no_errors	IGDCC4	HGNC	ENSG00000103742	14	0	0.00	12	5	29.41	-	-	-
ITGB3	0	genome.wustl.edu	37	17	45387552	45387553	+	Frame_Shift_Ins	INS	-	-	ACGT			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	17	45387552	45387553	-	ACGT	INS	ITGB3	ENST00000262017	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2349_2350	p.R785fs	1.000:1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_cyt	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB3	HGNC	ENSG00000259207	46	0	0.00	28	8	22.22	-	-	-
ITGB6	0	genome.wustl.edu	37	2	161030528	161030528	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	161030528	161030528	G	T	SNP	ITGB6	ENST00000283249	human	ensembl	69_37n	-1	known	missense	c.716	p.P239H	0.998	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB6	HGNC	ENSG00000115221	48	0	0.00	45	19	29.69	-	-	-
KCNA5	0	genome.wustl.edu	37	12	5154013	5154013	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	12	5154013	5154013	C	T	SNP	KCNA5	ENST00000252321	human	ensembl	69_37n	+1	known	missense	c.700	p.R234C	0.910	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	76	0	0.00	54	20	27.03	-	-	-
KPNA1	0	genome.wustl.edu	37	3	122146502	122146503	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	3	122146502	122146503	-	TA	INS	KPNA1	ENST00000344337	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1312_1311	p.K437fs	1.000:1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA1	HGNC	ENSG00000114030	30	0	0.00	24	9	27.27	-	-	-
KRTAP9-7	0	genome.wustl.edu	37	17	39432040	39432040	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	17	39432040	39432040	C	T	SNP	KRTAP9-7	ENST00000391354	human	ensembl	69_37n	+1	known	missense	c.91	p.P31S	0.000	NULL	NULL	-	no_errors	KRTAP9-7	HGNC	ENSG00000180386	20	0	0.00	16	4	20.00	-	-	-
LAD1	0	genome.wustl.edu	37	1	201352318	201352318	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	201352318	201352318	G	A	SNP	LAD1	ENST00000367313	human	ensembl	69_37n	-1	known	missense	c.1312	p.R438W	0.004	pirsf_Ladinin_1	pirsf_Ladinin_1	-	no_errors	LAD1	HGNC	ENSG00000159166	21	0	0.00	28	8	22.22	-	-	-
LCN8	0	genome.wustl.edu	37	9	139650606	139650606	+	RNA	SNP	A	A	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	9	139650606	139650606	A	G	SNP	LCN8	ENST00000482893	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.034	-	-	-	no_errors	LCN8	HGNC	ENSG00000204001	22	0	0.00	33	10	23.26	-	-	-
LCT	0	genome.wustl.edu	37	2	136594164	136594164	+	Silent	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	136594164	136594164	G	A	SNP	LCT	ENST00000264162	human	ensembl	69_37n	-1	known	silent	c.576	p.L192	0.069	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	76	0	0.00	77	11	12.50	-	-	-
LRRFIP1	0	genome.wustl.edu	37	2	238643965	238643965	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	238643965	238643965	G	C	SNP	LRRFIP1	ENST00000308482	human	ensembl	69_37n	+1	putative	missense	c.544	p.G182R	0.002	NULL	pfam_Leu-rich_rep_flightless-int_pr,superfamily_Prefoldin	-	no_errors	LRRFIP1	HGNC	ENSG00000124831	30	0	0.00	22	8	26.67	-	-	-
MAPK8IP3	0	genome.wustl.edu	37	16	1816295	1816295	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	16	1816295	1816295	G	T	SNP	MAPK8IP3	ENST00000250894	human	ensembl	69_37n	+1	known	missense	c.2701	p.V901L	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834	16	0	0.00	15	6	28.57	-	-	-
MAST3	0	genome.wustl.edu	37	19	18257727	18257727	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	19	18257727	18257727	G	A	SNP	MAST3	ENST00000262811	human	ensembl	69_37n	+1	known	missense	c.3112	p.E1038K	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_cat_dom	-	no_errors	MAST3	HGNC	ENSG00000099308	32	0	0.00	23	21	47.73	-	-	-
MB	0	genome.wustl.edu	37	22	36007099	36007099	+	Silent	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	22	36007099	36007099	C	T	SNP	MB	ENST00000359787	human	ensembl	69_37n	-1	known	silent	c.150	p.L50	1.000	pfam_Globin,superfamily_Globin-like,pfscan_Globin	pfam_Globin,superfamily_Globin-like,prints_Myoglobin,pfscan_Globin	-	no_errors	MB	HGNC	ENSG00000198125	57	0	0.00	25	11	30.56	-	-	-
MEOX2	0	genome.wustl.edu	37	7	15725586	15725586	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	7	15725586	15725586	C	T	SNP	MEOX2	ENST00000262041	human	ensembl	69_37n	-1	known	missense	c.442	p.D148N	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	MEOX2	HGNC	ENSG00000106511	37	0	0.00	55	12	17.91	-	-	-
MNT	0	genome.wustl.edu	37	17	2290427	2290427	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	17	2290427	2290427	G	A	SNP	MNT	ENST00000174618	human	ensembl	69_37n	-1	known	missense	c.1517	p.S506F	0.995	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	MNT	HGNC	ENSG00000070444	96	0	0.00	47	38	44.71	-	-	-
MUC19	0	genome.wustl.edu	37	12	40857956	40857956	+	Silent	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	12	40857956	40857956	C	T	SNP	MUC19	ENST00000425730	human	ensembl	69_37n	+1	novel	silent	c.4233	p.V1411	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_VWC_out,smart_Unchr_dom_Cys-rich	-	no_stop_codon:bad_bp_length_for_coding_region	MUC19	HGNC	ENSG00000205592	30	0	0.00	19	6	24.00	-	-	-
NDN	0	genome.wustl.edu	37	15	23931600	23931600	+	Silent	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	15	23931600	23931600	C	T	SNP	NDN	ENST00000331837	human	ensembl	69_37n	-1	known	silent	c.765	p.P255	0.018	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	NDN	HGNC	ENSG00000182636	60	0	0.00	53	12	18.46	-	-	-
NOS3	0	genome.wustl.edu	37	7	150706014	150706014	+	RNA	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	7	150706014	150706014	G	T	SNP	NOS3	ENST00000473057	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.640	-	-	-	no_errors	NOS3	HGNC	ENSG00000164867	40	0	0.00	30	8	21.05	-	-	-
NPY1R	0	genome.wustl.edu	37	4	164246691	164246691	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	4	164246691	164246691	G	T	SNP	NPY1R	ENST00000296533	human	ensembl	69_37n	-1	known	missense	c.919	p.L307I	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_NPY_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_Glucose_rcpt_Git3_N,pfscan_GPCR_Rhodpsn_supfam,prints_NPY1_rcpt,prints_7TM_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPY1R	HGNC	ENSG00000164128	25	0	0.00	32	5	13.51	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228511202	228511202	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	228511202	228511202	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	nonsense	c.15547	p.Q5183*	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	43	0	0.00	27	6	18.18	-	-	-
ORMDL1	0	genome.wustl.edu	37	2	190636411	190636411	+	RNA	SNP	C	C	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	190636411	190636411	C	G	SNP	ORMDL1	ENST00000496543	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.539	-	-	-	no_errors	ORMDL1	HGNC	ENSG00000128699	28	0	0.00	27	4	12.90	-	-	-
PCDH18	0	genome.wustl.edu	37	4	138451312	138451312	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	4	138451312	138451312	A	T	SNP	PCDH18	ENST00000344876	human	ensembl	69_37n	-1	known	missense	c.1931	p.M644K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDH18	HGNC	ENSG00000189184	43	0	0.00	44	11	20.00	-	-	-
PCDHB13	0	genome.wustl.edu	37	5	140594884	140594884	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	140594884	140594884	G	A	SNP	PCDHB13	ENST00000341948	human	ensembl	69_37n	+1	known	missense	c.1189	p.A397T	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	53	0	0.00	32	11	25.58	-	-	-
PCDHB7	0	genome.wustl.edu	37	5	140553979	140553979	+	Silent	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	140553979	140553979	C	T	SNP	PCDHB7	ENST00000231137	human	ensembl	69_37n	+1	known	silent	c.1563	p.Y521	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	107	0	0.00	93	33	26.19	-	-	-
PDZRN3	0	genome.wustl.edu	37	3	73523654	73523654	+	Silent	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	3	73523654	73523654	G	A	SNP	PDZRN3	ENST00000535920	human	ensembl	69_37n	-1	known	silent	c.36	p.F12	0.015	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZRN3	HGNC	ENSG00000121440	22	0	0.00	8	6	42.86	-	-	-
PPFIA4	0	genome.wustl.edu	37	1	203025561	203025563	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	203025561	203025563	CTC	-	DEL	PPFIA4	ENST00000367240	human	ensembl	69_37n	+1	known	in_frame_del	c.2102_2104	p.P703in_frame_del	1.000:0.996:1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_Prefoldin,smart_SAM,pfscan_SAM	-	no_errors	PPFIA4	HGNC	ENSG00000143847	43	0	0.00	33	6	15.38	-	-	-
PPM1D	0	genome.wustl.edu	37	17	58740764	58740764	+	Silent	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	17	58740764	58740764	C	A	SNP	PPM1D	ENST00000305921	human	ensembl	69_37n	+1	known	silent	c.1669	p.R557	0.816	NULL	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1D	HGNC	ENSG00000170836	21	0	0.00	13	6	31.58	-	-	-
PSD	0	genome.wustl.edu	37	10	104174725	104174725	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	10	104174725	104174725	C	A	SNP	PSD	ENST00000020673	human	ensembl	69_37n	-1	known	missense	c.1019	p.G340V	0.012	NULL	pfam_Sec7,pfam_Pleckstrin_homology,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7,prints_PH_dom-spectrin-type	-	no_errors	PSD	HGNC	ENSG00000059915	55	0	0.00	37	20	35.09	-	-	-
PTPRQ	0	genome.wustl.edu	37	12	80936644	80936644	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	12	80936644	80936644	A	G	SNP	PTPRQ	ENST00000266688	human	ensembl	69_37n	+1	known	missense	c.3845	p.D1282G	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC	ENSG00000139304	45	0	0.00	25	10	28.57	-	-	-
RABGAP1L	0	genome.wustl.edu	37	1	174927026	174927026	+	Splice_Site	SNP	A	A	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	174927026	174927026	A	C	SNP	RABGAP1L	ENST00000251507	human	ensembl	69_37n	+1	known	splice_site	c.2434-2	e20-2	1.000	-	-	-	no_errors	RABGAP1L	HGNC	ENSG00000152061	68	0	0	60	16	21.05	-	-	-
SCN11A	0	genome.wustl.edu	37	3	38889033	38889033	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	3	38889033	38889033	T	C	SNP	SCN11A	ENST00000302328	human	ensembl	69_37n	-1	known	missense	c.4528	p.I1510V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	32	0	0.00	14	5	26.32	-	-	-
SEC14L5	0	genome.wustl.edu	37	16	5061184	5061184	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	16	5061184	5061184	G	C	SNP	SEC14L5	ENST00000251170	human	ensembl	69_37n	+1	known	missense	c.1889	p.G630A	0.995	superfamily_GOLD,pfscan_GOLD	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L5	HGNC	ENSG00000103184	77	0	0.00	55	19	25.68	-	-	-
SHC4	0	genome.wustl.edu	37	15	49255010	49255010	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	15	49255010	49255010	G	A	SNP	SHC4	ENST00000332408	human	ensembl	69_37n	-1	known	missense	c.203	p.P68L	0.971	NULL	pfam_PTyr_interaction_dom,pfam_SH2,smart_PTyr_interaction_dom,smart_SH2,prints_PID_domain,prints_SH2,pfscan_PTyr_interaction_dom,pfscan_SH2	-	no_errors	SHC4	HGNC	ENSG00000185634	33	0	0.00	40	11	21.57	-	-	-
SLC25A30	0	genome.wustl.edu	37	13	45971461	45971461	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	13	45971461	45971461	C	T	SNP	SLC25A30	ENST00000519676	human	ensembl	69_37n	-1	known	missense	c.766	p.E256K	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling,prints_Mit_carrier	-	no_errors	SLC25A30	HGNC	ENSG00000174032	33	0	0.00	12	10	45.45	-	-	-
SLC38A9	0	genome.wustl.edu	37	5	55008321	55008321	+	RNA	SNP	G	G	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	55008321	55008321	G	C	SNP	SLC38A9	ENST00000504880	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC38A9	HGNC	ENSG00000177058	26	0	0.00	19	5	20.00	-	-	-
SNORD96A	0	genome.wustl.edu	37	5	180668879	180668879	+	RNA	SNP	T	T	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	180668879	180668879	T	C	SNP	SNORD96A	ENST00000385607	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.982	-	-	-	no_errors	SNORD96A	HGNC	ENSG00000208342	58	0	0.00	60	12	16.67	-	-	-
SNORD96A	0	genome.wustl.edu	37	5	180668880	180668880	+	RNA	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	180668880	180668880	C	A	SNP	SNORD96A	ENST00000385607	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORD96A	HGNC	ENSG00000208342	60	0	0.00	65	12	15.38	-	-	-
SNORD96A	0	genome.wustl.edu	37	5	180668881	180668881	+	RNA	SNP	A	A	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	5	180668881	180668881	A	T	SNP	SNORD96A	ENST00000385607	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORD96A	HGNC	ENSG00000208342	59	0	0.00	66	12	15.38	-	-	-
SUSD4	0	genome.wustl.edu	37	1	223441874	223441874	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	223441874	223441874	C	A	SNP	SUSD4	ENST00000343846	human	ensembl	69_37n	-1	known	nonsense	c.505	p.G169*	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD4	HGNC	ENSG00000143502	35	0	0.00	18	8	30.77	-	-	-
SYNJ2	0	genome.wustl.edu	37	6	158480367	158480367	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	6	158480367	158480367	G	T	SNP	SYNJ2	ENST00000485863	human	ensembl	69_37n	+1	known	missense	c.416	p.C139F	1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfscan_Syja_N	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SYNJ2	HGNC	ENSG00000078269	23	0	0.00	17	4	19.05	-	-	-
SYT4	0	genome.wustl.edu	37	18	40854127	40854127	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	18	40854127	40854127	C	A	SNP	SYT4	ENST00000255224	human	ensembl	69_37n	-1	known	missense	c.267	p.K89N	1.000	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting,prints_Synaptotagmin	-	no_errors	SYT4	HGNC	ENSG00000132872	74	0	0.00	37	15	28.85	-	-	-
TCEA2	0	genome.wustl.edu	37	20	62703271	62703271	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	20	62703271	62703271	A	T	SNP	TCEA2	ENST00000343484	human	ensembl	69_37n	+1	known	missense	c.868	p.N290Y	1.000	pfam_Znf_TFIIS,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	pfam_TFIIS_cen_dom,pfam_TFIIS_N,pfam_Znf_TFIIS,superfamily_TFIIS_cen_dom,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_TFS2M,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	-	no_errors	TCEA2	HGNC	ENSG00000171703	65	0	0.00	32	17	34.69	-	-	-
TFAP2B	0	genome.wustl.edu	37	6	50805705	50805705	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	6	50805705	50805705	G	A	SNP	TFAP2B	ENST00000263046	human	ensembl	69_37n	+1	known	missense	c.866	p.G289E	1.000	pfam_TF_AP2_C,prints_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_beta,prints_TF_AP2_C	-	no_errors	TFAP2B	HGNC	ENSG00000008196	28	0	0.00	31	6	16.22	-	-	-
TP53	0	genome.wustl.edu	37	17	7578440	7578440	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	17	7578440	7578440	T	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.490	p.K164E	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	25	0	0.00	12	5	27.78	-	-	-
TRIM46	0	genome.wustl.edu	37	1	155154369	155154369	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	1	155154369	155154369	G	C	SNP	TRIM46	ENST00000334634	human	ensembl	69_37n	+1	known	missense	c.1630	p.E544Q	1.000	pfscan_B30.2/SPRY	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462	122	0	0.00	110	45	29.03	-	-	-
TRPC4	0	genome.wustl.edu	37	13	38320328	38320328	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	13	38320328	38320328	C	G	SNP	TRPC4	ENST00000379681	human	ensembl	69_37n	-1	known	missense	c.643	p.D215H	1.000	pfam_TRP_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107	57	0	0.00	44	11	20.00	-	-	-
UGT1A10	0	genome.wustl.edu	37	2	234545372	234545372	+	Silent	SNP	A	A	G			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	2	234545372	234545372	A	G	SNP	UGT1A10	ENST00000344644	human	ensembl	69_37n	+1	known	silent	c.204	p.R68	0.006	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A10	HGNC	ENSG00000242515	89	0	0.00	58	15	20.55	-	-	-
UNC13C	0	genome.wustl.edu	37	15	54306089	54306089	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	15	54306089	54306089	G	T	SNP	UNC13C	ENST00000260323	human	ensembl	69_37n	+1	known	missense	c.989	p.R330I	0.990	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_Ca-dep,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	91	0	0.00	59	13	18.06	-	-	-
WASH6P	0	genome.wustl.edu	37	X	155251319	155251319	+	RNA	SNP	C	C	T			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	X	155251319	155251319	C	T	SNP	WASH6P	ENST00000461007	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.975	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484	27	0	0.00	21	5	19.23	-	-	-
ZFAT	0	genome.wustl.edu	37	8	135612755	135612755	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	8	135612755	135612755	C	A	SNP	ZFAT	ENST00000377838	human	ensembl	69_37n	-1	known	missense	c.2399	p.C800F	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827	35	0	0.00	40	6	13.04	-	-	-
ZNF677	0	genome.wustl.edu	37	19	53741153	53741153	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1LE-01A-12D-A19Y-09	TCGA-E2-A1LE-11A-23D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	eac99b55-b6ca-40be-8bd5-8ac8bf066651	85a70007-4c24-4ac8-9f64-7d7502788851	19	53741153	53741153	G	A	SNP	ZNF677	ENST00000333952	human	ensembl	69_37n	-1	known	missense	c.827	p.S276L	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF677	HGNC	ENSG00000197928	52	0	0.00	34	13	27.66	-	-	-
