Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AIM1L	0	genome.wustl.edu	37	1	26669642	26669642	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	1	26669642	26669642	G	T	SNP	AIM1L	ENST00000527815	human	ensembl	69_37n	-1	known	missense	c.348	p.F116L	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	AIM1L	HGNC	ENSG00000176092	54	0	0.00	17	9	34.62	-	-	-
ANKZF1	0	genome.wustl.edu	37	2	220099673	220099673	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	2	220099673	220099673	A	G	SNP	ANKZF1	ENST00000323348	human	ensembl	69_37n	+1	known	missense	c.1330	p.K444E	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKZF1	HGNC	ENSG00000163516	83	0	0.00	32	11	25.58	-	-	-
BCL11B	0	genome.wustl.edu	37	14	99641544	99641546	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	14	99641544	99641546	CTC	-	DEL	BCL11B	ENST00000357195	human	ensembl	69_37n	-1	known	in_frame_del	c.1629_1627	p.E543in_frame_del	1.000:1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152	10	0	0.00	4	2	33.33	-	-	-
C19orf47	0	genome.wustl.edu	37	19	40827096	40827096	+	RNA	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	19	40827096	40827096	C	T	SNP	C19orf47	ENST00000584868	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C19orf47	HGNC	ENSG00000160392	38	0	0.00	17	3	15.00	-	-	-
C2CD3	0	genome.wustl.edu	37	11	73850818	73850818	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	73850818	73850818	G	C	SNP	C2CD3	ENST00000334126	human	ensembl	69_37n	-1	known	missense	c.539	p.P180R	0.997	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	-	no_errors	C2CD3	HGNC	ENSG00000168014	87	0	0.00	70	35	33.33	-	-	-
CAMK2G	0	genome.wustl.edu	37	10	75608353	75608353	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	10	75608353	75608353	G	T	SNP	CAMK2G	ENST00000423381	human	ensembl	69_37n	-1	known	missense	c.532	p.P178T	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMK2G	HGNC	ENSG00000148660	40	0	0.00	16	8	33.33	-	-	-
CHRNG	0	genome.wustl.edu	37	2	233404776	233404776	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	2	233404776	233404776	G	A	SNP	CHRNG	ENST00000389494	human	ensembl	69_37n	+1	known	missense	c.130	p.A44T	0.854	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNG	HGNC	ENSG00000196811	51	0	0.00	21	5	19.23	-	-	-
COL5A1	0	genome.wustl.edu	37	9	137593087	137593087	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	9	137593087	137593087	A	G	SNP	COL5A1	ENST00000371817	human	ensembl	69_37n	+1	known	missense	c.562	p.T188A	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	74	0	0.00	55	7	11.29	-	-	-
DYRK3	0	genome.wustl.edu	37	1	206821748	206821748	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	1	206821748	206821748	T	G	SNP	DYRK3	ENST00000367109	human	ensembl	69_37n	+1	known	missense	c.1205	p.L402R	0.999	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DYRK3	HGNC	ENSG00000143479	44	0	0.00	22	19	46.34	-	-	-
EMC7	0	genome.wustl.edu	37	15	34393857	34393857	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	15	34393857	34393857	T	C	SNP	EMC7	ENST00000256545	human	ensembl	69_37n	-1	known	missense	c.184	p.I62V	1.000	pfam_DUF2012,superfamily_Carb-bd-like_fold	pfam_DUF2012,superfamily_Carb-bd-like_fold	-	no_errors	EMC7	HGNC	ENSG00000134153	54	0	0.00	18	12	40.00	-	-	-
FAM123B	0	genome.wustl.edu	37	X	63412663	63412663	+	Silent	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	X	63412663	63412663	G	A	SNP	FAM123B	ENST00000330258	human	ensembl	69_37n	-1	known	silent	c.504	p.G168	0.982	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	FAM123B	HGNC	ENSG00000184675	117	0	0.00	35	11	23.91	-	-	-
FILIP1	0	genome.wustl.edu	37	6	76063403	76063403	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	6	76063403	76063403	T	A	SNP	FILIP1	ENST00000237172	human	ensembl	69_37n	-1	known	missense	c.481	p.T161S	1.000	pfam_Cortactin-binding_p2_N	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407	69	0	0.00	15	26	63.41	-	-	-
GABRR3	0	genome.wustl.edu	37	3	97705686	97705686	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	3	97705686	97705686	G	-	DEL	GABRR3	ENST00000472788	human	ensembl	69_37n	-1	known	frame_shift_del	c.1245	p.S416fs	0.985	NULL	NULL	-	pseudogene	GABRR3	HGNC	ENSG00000183185	67	0	0.00	20	27	56.25	-	-	-
GGT3P	0	genome.wustl.edu	37	22	18762636	18762636	+	RNA	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	22	18762636	18762636	G	A	SNP	GGT3P	ENST00000412448	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.088	-	-	-	no_errors	GGT3P	HGNC	ENSG00000197421	13	0	0.00	0	3	100.00	-	-	-
HERC2	0	genome.wustl.edu	37	15	28501279	28501279	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	15	28501279	28501279	G	A	SNP	HERC2	ENST00000261609	human	ensembl	69_37n	-1	known	missense	c.2702	p.A901V	0.996	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5,superfamily_UBA-like,superfamily_CUB,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	80	0	0.00	32	13	28.89	-	-	-
HSPA5	0	genome.wustl.edu	37	9	128002548	128002548	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	9	128002548	128002548	A	G	SNP	HSPA5	ENST00000324460	human	ensembl	69_37n	-1	known	missense	c.395	p.I132T	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA5	HGNC	ENSG00000044574	65	0	0.00	18	28	60.87	-	-	-
HSPA8	0	genome.wustl.edu	37	11	122929479	122929479	+	Silent	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	122929479	122929479	G	A	SNP	HSPA8	ENST00000534624	human	ensembl	69_37n	-1	known	silent	c.1383	p.L461	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA8	HGNC	ENSG00000109971	102	0	0.00	8	24	75.00	-	-	-
IL13RA2	0	genome.wustl.edu	37	X	114239780	114239780	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	X	114239780	114239780	G	T	SNP	IL13RA2	ENST00000243213	human	ensembl	69_37n	-1	known	missense	c.1096	p.P366T	0.000	NULL	pfam_IL6_recept-bd,superfamily_Fibronectin_type3	-	no_errors	IL13RA2	HGNC	ENSG00000123496	88	0	0.00	34	12	26.09	-	-	-
IZUMO3	0	genome.wustl.edu	37	9	24543688	24543688	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	9	24543688	24543688	A	G	SNP	IZUMO3	ENST00000412335	human	ensembl	69_37n	-1	putative	missense	c.352	p.C118R	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	IZUMO3	HGNC	ENSG00000205442	58	0	0.00	2	11	84.62	-	-	-
KIF27	0	genome.wustl.edu	37	9	86518580	86518580	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	9	86518580	86518580	G	A	SNP	KIF27	ENST00000297814	human	ensembl	69_37n	-1	known	missense	c.853	p.R285C	0.992	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115	61	0	0.00	22	3	12.00	-	-	-
KLF15	0	genome.wustl.edu	37	3	126071710	126071710	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	3	126071710	126071710	A	G	SNP	KLF15	ENST00000296233	human	ensembl	69_37n	-1	known	missense	c.56	p.V19A	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF15	HGNC	ENSG00000163884	42	0	0.00	8	6	42.86	-	-	-
LRRC4C	0	genome.wustl.edu	37	11	40136396	40136396	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	40136396	40136396	C	T	SNP	LRRC4C	ENST00000527150	human	ensembl	69_37n	-1	known	missense	c.1447	p.D483N	0.935	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	LRRC4C	HGNC	ENSG00000148948	188	0	0.00	84	17	16.83	-	-	-
MYO1H	0	genome.wustl.edu	37	12	109879456	109879456	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	12	109879456	109879456	G	A	SNP	MYO1H	ENST00000431443	human	ensembl	69_37n	+1	known	missense	c.2557	p.G853R	1.000	pfam_Myosin_tail_2	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1H	HGNC	ENSG00000174527	37	0	0.00	29	11	27.50	-	-	-
NAALAD2	0	genome.wustl.edu	37	11	89885543	89885543	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	89885543	89885543	A	-	DEL	NAALAD2	ENST00000534061	human	ensembl	69_37n	+1	known	frame_shift_del	c.687	p.Q230fs	0.997	pfam_Protease-assoc_domain	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALAD2	HGNC	ENSG00000077616	56	0	0.00	14	2	12.50	-	-	-
NCAPD3	0	genome.wustl.edu	37	11	134055270	134055270	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	134055270	134055270	C	-	DEL	NCAPD3	ENST00000534548	human	ensembl	69_37n	-1	known	frame_shift_del	c.2197	p.D733fs	1.000	superfamily_ARM-type_fold,pirsf_Condns_HCP-6	superfamily_ARM-type_fold,pirsf_Condns_HCP-6	-	no_errors	NCAPD3	HGNC	ENSG00000151503	74	0	0.00	13	2	13.33	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167589717	167589717	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	5	167589717	167589717	G	A	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	missense	c.2524	p.V842I	1.000	superfamily_ConA-like_lec_gl	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	48	0	0.00	37	10	21.28	-	-	-
OR4K5	0	genome.wustl.edu	37	14	20389502	20389502	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	14	20389502	20389502	T	C	SNP	OR4K5	ENST00000315915	human	ensembl	69_37n	+1	known	missense	c.737	p.V246A	0.702	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4K5	HGNC	ENSG00000176281	131	0	0.00	90	17	15.89	-	-	-
PAWR	0	genome.wustl.edu	37	12	80083615	80083615	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	12	80083615	80083615	C	G	SNP	PAWR	ENST00000328827	human	ensembl	69_37n	-1	known	missense	c.410	p.G137A	1.000	NULL	NULL	-	no_errors	PAWR	HGNC	ENSG00000177425	31	0	0.00	23	4	14.81	-	-	-
PCBP4	0	genome.wustl.edu	37	3	51993955	51993956	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	3	51993955	51993956	CA	-	DEL	PCBP4	ENST00000395014	human	ensembl	69_37n	-1	known	frame_shift_del	c.535_534	p.A179fs	0.952:0.452	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP4	HGNC	ENSG00000090097	57	0	0.00	17	2	10.53	-	-	-
PCDHA2	0	genome.wustl.edu	37	5	140176412	140176412	+	Silent	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	5	140176412	140176412	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	69_37n	+1	known	silent	c.1863	p.P621	0.404	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	184	0	0.00	115	14	10.85	-	-	-
PCDHB5	0	genome.wustl.edu	37	5	140516842	140516842	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	5	140516842	140516842	C	T	SNP	PCDHB5	ENST00000231134	human	ensembl	69_37n	+1	known	missense	c.1826	p.T609M	0.991	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209	218	0	0.00	99	43	30.28	-	-	-
PDZD2	0	genome.wustl.edu	37	5	32074112	32074112	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	5	32074112	32074112	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	69_37n	+1	known	missense	c.2900	p.A967V	0.001	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	41	0	0.00	14	4	22.22	-	-	-
PEX7	0	genome.wustl.edu	37	6	137191068	137191068	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	6	137191068	137191068	G	T	SNP	PEX7	ENST00000318471	human	ensembl	69_37n	+1	known	missense	c.674	p.G225V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PEX7	HGNC	ENSG00000112357	111	0	0.00	39	13	25.00	-	-	-
PHIP	0	genome.wustl.edu	37	6	79698009	79698009	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	6	79698009	79698009	G	-	DEL	PHIP	ENST00000275034	human	ensembl	69_37n	-1	known	frame_shift_del	c.2377	p.Q793fs	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quinonprotein_ADH-like,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	PHIP	HGNC	ENSG00000146247	87	0	0.00	43	9	16.98	-	-	-
PHIP	0	genome.wustl.edu	37	6	79698011	79698011	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	6	79698011	79698011	T	A	SNP	PHIP	ENST00000275034	human	ensembl	69_37n	-1	known	missense	c.2375	p.N792I	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quinonprotein_ADH-like,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	PHIP	HGNC	ENSG00000146247	87	0	0.00	41	10	19.61	-	-	-
PI4KAP2	0	genome.wustl.edu	37	22	21841928	21841928	+	RNA	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	22	21841928	21841928	G	A	SNP	PI4KAP2	ENST00000450651	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.912	-	-	-	no_errors	PI4KAP2	HGNC	ENSG00000183506	30	0	0.00	4	8	66.67	-	-	-
PLEKHB1	0	genome.wustl.edu	37	11	73364048	73364048	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	73364048	73364048	A	C	SNP	PLEKHB1	ENST00000354190	human	ensembl	69_37n	+1	known	missense	c.379	p.N127H	0.644	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHB1	HGNC	ENSG00000021300	35	0	0.00	16	4	20.00	-	-	-
PNMA1	0	genome.wustl.edu	37	14	74179692	74179692	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	14	74179692	74179692	A	-	DEL	PNMA1	ENST00000316836	human	ensembl	69_37n	-1	known	frame_shift_del	c.651	p.K218fs	1.000	NULL	superfamily_Globin-like	-	no_errors	PNMA1	HGNC	ENSG00000176903	97	0	0.00	12	2	14.29	-	-	-
POLQ	0	genome.wustl.edu	37	3	121202430	121202430	+	Splice_Site	DEL	C	C	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	3	121202430	121202430	C	-	DEL	POLQ	ENST00000264233	human	ensembl	69_37n	-1	known	splice_site_del	c.5774-1	e18-1	1.000	-	-	-	no_errors	POLQ	HGNC	ENSG00000051341	10	0	0.00	6	3	33.33	-	-	-
PPIL2	0	genome.wustl.edu	37	22	22036753	22036753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	22	22036753	22036753	A	-	DEL	PPIL2	ENST00000412327	human	ensembl	69_37n	+1	known	frame_shift_del	c.415	p.K139fs	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,smart_Ubox_domain,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL2	HGNC	ENSG00000100023	44	0	0.00	13	2	13.33	-	-	-
PRELID2	0	genome.wustl.edu	37	5	145214806	145214806	+	Silent	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	5	145214806	145214806	G	A	SNP	PRELID2	ENST00000334744	human	ensembl	69_37n	-1	known	silent	c.9	p.V3	1.000	pfscan_PRELI/MSF1	pfam_PRELI/MSF1,pfscan_PRELI/MSF1	-	no_errors	PRELID2	HGNC	ENSG00000186314	57	0	0.00	28	6	17.65	-	-	-
RAB6A	0	genome.wustl.edu	37	11	73390734	73390734	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	73390734	73390734	C	T	SNP	RAB6A	ENST00000310653	human	ensembl	69_37n	-1	known	missense	c.527	p.G176E	1.000	smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB6A	HGNC	ENSG00000175582	115	0	0.00	84	28	25.00	-	-	-
RAB6A	0	genome.wustl.edu	37	11	73390735	73390735	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	73390735	73390735	C	T	SNP	RAB6A	ENST00000310653	human	ensembl	69_37n	-1	known	missense	c.526	p.G176R	1.000	smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB6A	HGNC	ENSG00000175582	116	0	0.00	83	29	25.89	-	-	-
RAB6A	0	genome.wustl.edu	37	11	73390744	73390744	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	73390744	73390744	C	T	SNP	RAB6A	ENST00000310653	human	ensembl	69_37n	-1	known	missense	c.517	p.A173T	1.000	pfam_Small_GTPase,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB6A	HGNC	ENSG00000175582	115	0	0.00	82	27	24.77	-	-	-
SEMA3G	0	genome.wustl.edu	37	3	52473711	52473711	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	3	52473711	52473711	C	G	SNP	SEMA3G	ENST00000231721	human	ensembl	69_37n	-1	known	missense	c.1452	p.E484D	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA3G	HGNC	ENSG00000010319	47	0	0.00	9	6	40.00	-	-	-
SF3B1	0	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	2	198266834	198266834	T	C	SNP	SF3B1	ENST00000335508	human	ensembl	69_37n	-1	known	missense	c.2098	p.K700E	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	43	0	0.00	19	3	13.64	-	-	-
SOGA1	0	genome.wustl.edu	37	20	35431404	35431404	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	20	35431404	35431404	T	C	SNP	SOGA1	ENST00000357779	human	ensembl	69_37n	-1	known	missense	c.2480	p.Y827C	1.000	NULL	pfam_DUF3166	-	no_errors	SOGA1	HGNC	ENSG00000149639	41	0	0.00	18	10	35.71	-	-	-
SUSD1	0	genome.wustl.edu	37	9	114874096	114874096	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	9	114874096	114874096	C	T	SNP	SUSD1	ENST00000415074	human	ensembl	69_37n	-1	novel	nonsense	c.450	p.W150*	0.009	NULL	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SUSD1	HGNC	ENSG00000106868	57	0	0.00	40	15	27.27	-	-	-
UBE4A	0	genome.wustl.edu	37	11	118239438	118239438	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	118239438	118239438	T	A	SNP	UBE4A	ENST00000431736	human	ensembl	69_37n	+1	known	missense	c.214	p.F72I	0.998	NULL	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4A	HGNC	ENSG00000110344	53	0	0.00	5	8	61.54	-	-	-
UGGT2	0	genome.wustl.edu	37	13	96684189	96684189	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	13	96684189	96684189	C	T	SNP	UGGT2	ENST00000376747	human	ensembl	69_37n	-1	known	nonsense	c.195	p.W65*	1.000	NULL	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595	22	0	0.00	7	3	30.00	-	-	-
USH1C	0	genome.wustl.edu	37	11	17547981	17547981	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	11	17547981	17547981	C	T	SNP	USH1C	ENST00000005226	human	ensembl	69_37n	-1	known	missense	c.587	p.R196Q	0.515	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	USH1C	HGNC	ENSG00000006611	50	0	0.00	7	15	68.18	-	-	-
VN1R4	0	genome.wustl.edu	37	19	53770436	53770436	+	Silent	SNP	G	G	A			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	19	53770436	53770436	G	A	SNP	VN1R4	ENST00000311170	human	ensembl	69_37n	-1	known	silent	c.483	p.N161	0.000	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Vmron_rcpt_1	-	no_errors	VN1R4	HGNC	ENSG00000228567	217	0	0.00	65	38	36.89	-	-	-
VPS41	0	genome.wustl.edu	37	7	38908841	38908841	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	7	38908841	38908841	C	T	SNP	VPS41	ENST00000310301	human	ensembl	69_37n	-1	known	missense	c.73	p.E25K	1.000	pirsf_VPS41	pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_VPS41,pfscan_Znf_RING	-	no_errors	VPS41	HGNC	ENSG00000006715	53	0	0.00	24	13	35.14	-	-	-
VSIG8	0	genome.wustl.edu	37	1	159826348	159826348	+	Silent	SNP	G	G	C			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	1	159826348	159826348	G	C	SNP	VSIG8	ENST00000368100	human	ensembl	69_37n	-1	known	silent	c.738	p.G246	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	VSIG8	HGNC	ENSG00000243284	116	0	0.00	55	9	14.06	-	-	-
ZNF397	0	genome.wustl.edu	37	18	32822883	32822883	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E2-A56Z-01A-12D-A29N-09	TCGA-E2-A56Z-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da5821cd-8653-41e5-b2ee-d60e2e541f2f	fd447987-24d9-46ec-8f43-5525d8f42fde	18	32822883	32822883	T	-	DEL	ZNF397	ENST00000588119	human	ensembl	69_37n	+1	putative	frame_shift_del	c.447	p.L150fs	0.002	smart_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZNF397	HGNC	ENSG00000186812	11	0	0.00	4	2	33.33	-	-	-
