Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTL9	0	genome.wustl.edu	37	19	8808585	8808585	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	19	8808585	8808585	G	C	SNP	ACTL9	ENST00000324436	human	ensembl	69_37n	-1	known	missense	c.467	p.A156G	0.998	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTL9	HGNC	ENSG00000181786	13	0	0.00	14	5	26.32	-	-	-
ADAM20	0	genome.wustl.edu	37	14	70989944	70989944	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	14	70989944	70989944	G	T	SNP	ADAM20	ENST00000256389	human	ensembl	69_37n	-1	known	missense	c.1681	p.H561N	0.805	pfam_ADAM_Cys-rich,smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM20	HGNC	ENSG00000134007	54	0	0.00	49	6	10.91	-	-	-
ADCY10	0	genome.wustl.edu	37	1	167778922	167778922	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	167778922	167778922	T	G	SNP	ADCY10	ENST00000367851	human	ensembl	69_37n	-1	known	missense	c.4826	p.H1609P	0.897	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	54	0	0.00	104	35	25.18	-	-	-
AOC4	0	genome.wustl.edu	37	17	41020744	41020744	+	RNA	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	17	41020744	41020744	C	T	SNP	AOC4	ENST00000562301	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.952	-	-	-	no_errors	AOC4	Clone_based_vega_gene	ENSG00000260105	26	0	0.00	8	11	57.89	-	-	-
ARPP21	0	genome.wustl.edu	37	3	35725220	35725220	+	Silent	SNP	A	A	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	3	35725220	35725220	A	G	SNP	ARPP21	ENST00000417925	human	ensembl	69_37n	+1	known	silent	c.174	p.S58	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	ARPP21	HGNC	ENSG00000172995	47	0	0.00	14	12	46.15	-	-	-
ATP13A4	0	genome.wustl.edu	37	3	193182727	193182727	+	Splice_Site	SNP	A	A	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	3	193182727	193182727	A	T	SNP	ATP13A4	ENST00000342695	human	ensembl	69_37n	-1	known	splice_site	c.1461+2	e12+2	1.000	-	-	-	no_errors	ATP13A4	HGNC	ENSG00000127249	28	0	0	57	8	12.12	-	-	-
ATP1A4	0	genome.wustl.edu	37	1	160145985	160145985	+	Silent	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	160145985	160145985	C	A	SNP	ATP1A4	ENST00000368081	human	ensembl	69_37n	+1	known	silent	c.2415	p.P805	0.997	pfam_ATPase_P-typ_cation-transptr_C,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A4	HGNC	ENSG00000132681	67	0	0.00	91	24	20.87	-	-	-
C12orf74	0	genome.wustl.edu	37	12	93100671	93100671	+	Silent	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	93100671	93100671	G	A	SNP	C12orf74	ENST00000397833	human	ensembl	69_37n	+1	known	silent	c.264	p.L88	0.001	NULL	NULL	-	no_errors	C12orf74	HGNC	ENSG00000214215	13	0	0.00	13	8	38.10	-	-	-
C2orf71	0	genome.wustl.edu	37	2	29295725	29295725	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	2	29295725	29295725	T	C	SNP	C2orf71	ENST00000331664	human	ensembl	69_37n	-1	novel	missense	c.1403	p.H468R	0.000	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270	31	0	0.00	45	12	21.05	-	-	-
CACNA1C-AS1	0	genome.wustl.edu	37	12	2786827	2786827	+	RNA	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	2786827	2786827	C	T	SNP	CACNA1C-AS1	ENST00000501371	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CACNA1C-AS1	HGNC	ENSG00000246627	13	0	0.00	18	9	33.33	-	-	-
CBL	0	genome.wustl.edu	37	11	119170209	119170209	+	Silent	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	119170209	119170209	C	A	SNP	CBL	ENST00000264033	human	ensembl	69_37n	+1	known	silent	c.2439	p.V813	0.996	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/transl_elong_EF1B_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	19	0	0.00	15	9	37.50	-	-	-
CDH19	0	genome.wustl.edu	37	18	64239349	64239349	+	Silent	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	18	64239349	64239349	G	A	SNP	CDH19	ENST00000262150	human	ensembl	69_37n	-1	known	silent	c.93	p.V31	0.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH19	HGNC	ENSG00000071991	54	0	0.00	99	34	25.56	-	-	-
CHRFAM7A	0	genome.wustl.edu	37	15	30664509	30664509	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	15	30664509	30664509	A	C	SNP	CHRFAM7A	ENST00000299847	human	ensembl	69_37n	-1	known	missense	c.364	p.C122G	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	-	no_errors	CHRFAM7A	HGNC	ENSG00000166664	17	0	0.00	7	11	61.11	-	-	-
COL18A1	0	genome.wustl.edu	37	21	46925826	46925826	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	21	46925826	46925826	G	C	SNP	COL18A1	ENST00000423214	human	ensembl	69_37n	+1	putative	missense	c.149	p.W50S	0.284	pfam_Collagenase_NC10/endostatin	pfam_Collagenase_NC10/endostatin,superfamily_C-type_lectin_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	COL18A1	HGNC	ENSG00000182871	28	0	0.00	56	15	21.13	-	-	-
COL9A2	0	genome.wustl.edu	37	1	40776400	40776400	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	40776400	40776400	T	A	SNP	COL9A2	ENST00000372748	human	ensembl	69_37n	-1	known	missense	c.670	p.I224F	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL9A2	HGNC	ENSG00000049089	33	0	0.00	62	10	13.89	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34498201	34498201	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	34498201	34498201	A	G	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.511	p.Y171H	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	31	0	0.00	44	10	18.52	-	-	-
DCC	0	genome.wustl.edu	37	18	50918111	50918111	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	18	50918111	50918111	G	T	SNP	DCC	ENST00000442544	human	ensembl	69_37n	+1	known	missense	c.2542	p.V848L	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DCC	HGNC	ENSG00000187323	37	0	0.00	30	4	11.76	-	-	-
DENND2C	0	genome.wustl.edu	37	1	115168068	115168068	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	115168068	115168068	C	T	SNP	DENND2C	ENST00000393274	human	ensembl	69_37n	-1	known	missense	c.538	p.V180I	0.949	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2C	HGNC	ENSG00000175984	43	0	0.00	28	5	15.15	-	-	-
DICER1	0	genome.wustl.edu	37	14	95582139	95582139	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	14	95582139	95582139	G	C	SNP	DICER1	ENST00000343455	human	ensembl	69_37n	-1	known	missense	c.1772	p.S591C	1.000	pfscan_Helicase_C	pfam_RNase_III_dom,pfam_PAZ,pfam_Dicer_dsRNA_binding_fold,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_RNase_III_dom,superfamily_PAZ,smart_Helicase_ATP-bd,smart_Helicase_C,smart_PAZ,smart_RNase_III_dom,smart_Ds-RNA-bd,pfscan_PAZ,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Ds-RNA-bd,pfscan_RNase_III_dom	-	no_errors	DICER1	HGNC	ENSG00000100697	47	0	0.00	34	17	33.33	-	-	-
DLC1	0	genome.wustl.edu	37	8	12956004	12956005	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	8	12956004	12956005	-	T	INS	DLC1	ENST00000276297	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3071_3070	p.S1024fs	1.000:1.000	NULL	pfam_START_lipid-bd,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	55	0	0.00	25	11	30.56	-	-	-
DOCK3	0	genome.wustl.edu	37	3	51263131	51263131	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	3	51263131	51263131	G	C	SNP	DOCK3	ENST00000266037	human	ensembl	69_37n	+1	known	missense	c.1304	p.R435T	1.000	NULL	pfam_DOCK,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	47	0	0.00	49	14	22.22	-	-	-
DST	0	genome.wustl.edu	37	6	56473334	56473334	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	6	56473334	56473334	G	C	SNP	DST	ENST00000370754	human	ensembl	69_37n	-1	known	missense	c.5993	p.T1998S	0.999	pfam_Plectin_repeat,superfamily_ABC_transptrTM_dom_typ1,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	DST	HGNC	ENSG00000151914	42	0	0.00	31	17	35.42	-	-	-
EEF1D	0	genome.wustl.edu	37	8	144662368	144662368	+	Nonstop_Mutation	SNP	A	A	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	8	144662368	144662368	A	G	SNP	EEF1D	ENST00000530109	human	ensembl	69_37n	-1	putative	nonstop	c.244	p.*82R	0.985	pfam_Transl_elong_fac_EF1B_bsu/dsu,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	EEF1D	HGNC	ENSG00000104529	29	0	0.00	38	9	19.15	-	-	-
EHD1	0	genome.wustl.edu	37	11	64622246	64622246	+	Silent	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	64622246	64622246	G	A	SNP	EHD1	ENST00000320631	human	ensembl	69_37n	-1	known	silent	c.1164	p.N388	0.997	NULL	pfam_Dynamin_GTPase,smart_EPS15_homology,pfscan_EF_HAND_2,pfscan_EPS15_homology	-	no_errors	EHD1	HGNC	ENSG00000110047	25	0	0.00	43	22	33.85	-	-	-
ELFN2	0	genome.wustl.edu	37	22	37771398	37771398	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	22	37771398	37771398	G	T	SNP	ELFN2	ENST00000349653	human	ensembl	69_37n	-1	known	missense	c.177	p.D59E	1.000	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG-motif_cell_wall_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897	54	0	0.00	114	48	29.45	-	-	-
ETS2	0	genome.wustl.edu	37	21	40191520	40191520	+	Nonsense_Mutation	SNP	T	T	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	21	40191520	40191520	T	A	SNP	ETS2	ENST00000360214	human	ensembl	69_37n	+1	known	nonsense	c.905	p.L302*	0.998	pirsf_Transforming_factor_C-ets	pfam_Ets,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets,pirsf_Transforming_factor_C-ets,pfscan_Ets,prints_Ets	-	no_errors	ETS2	HGNC	ENSG00000157557	40	0	0.00	64	13	16.88	-	-	-
FAM5C	0	genome.wustl.edu	37	1	190067723	190067723	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	190067723	190067723	A	C	SNP	FAM5C	ENST00000367462	human	ensembl	69_37n	-1	known	missense	c.1726	p.F576V	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	FAM5C	HGNC	ENSG00000162670	32	0	0.00	54	15	21.74	-	-	-
FATE1	0	genome.wustl.edu	37	X	150889973	150889973	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	X	150889973	150889973	G	C	SNP	FATE1	ENST00000370350	human	ensembl	69_37n	+1	known	missense	c.341	p.R114P	0.016	pfam_FATE/Miff/Tango-11	pfam_FATE/Miff/Tango-11	-	no_errors	FATE1	HGNC	ENSG00000147378	36	0	0.00	18	7	28.00	-	-	-
FCER1A	0	genome.wustl.edu	37	1	159273897	159273897	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	159273897	159273897	G	A	SNP	FCER1A	ENST00000368115	human	ensembl	69_37n	+1	known	missense	c.256	p.E86K	0.000	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCER1A	HGNC	ENSG00000179639	31	0	0.00	29	9	23.68	-	-	-
FREM3	0	genome.wustl.edu	37	4	144548913	144548913	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	4	144548913	144548913	C	A	SNP	FREM3	ENST00000329798	human	ensembl	69_37n	-1	putative	missense	c.5276	p.G1759V	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC	ENSG00000183090	45	0	0.00	45	11	19.64	-	-	-
GLCCI1	0	genome.wustl.edu	37	7	8126035	8126035	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	7	8126035	8126035	C	T	SNP	GLCCI1	ENST00000223145	human	ensembl	69_37n	+1	known	missense	c.1511	p.T504M	0.062	NULL	NULL	-	no_errors	GLCCI1	HGNC	ENSG00000106415	45	0	0.00	41	11	21.15	-	-	-
HCFC2	0	genome.wustl.edu	37	12	104459971	104459971	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	104459971	104459971	G	C	SNP	HCFC2	ENST00000229330	human	ensembl	69_37n	+1	known	missense	c.190	p.V64L	1.000	NULL	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC	ENSG00000111727	50	0	0.00	44	18	29.03	-	-	-
IGFALS	0	genome.wustl.edu	37	16	1840820	1840820	+	Silent	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	16	1840820	1840820	C	T	SNP	IGFALS	ENST00000415638	human	ensembl	69_37n	-1	known	silent	c.1713	p.L571	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	IGFALS	HGNC	ENSG00000099769	12	0	0.00	14	5	26.32	-	-	-
IGHV1-46	0	genome.wustl.edu	37	14	106967297	106967297	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	14	106967297	106967297	C	A	SNP	IGHV1-46	ENST00000390622	human	ensembl	69_37n	-1	known	missense	c.103	p.A35S	0.025	pfam_Ig_V-set,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV1-46	HGNC	ENSG00000211962	56	0	0.00	74	17	18.68	-	-	-
IQGAP3	0	genome.wustl.edu	37	1	156532441	156532441	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	156532441	156532441	T	A	SNP	IQGAP3	ENST00000361170	human	ensembl	69_37n	-1	known	missense	c.815	p.Q272L	0.986	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_RasGAP	-	no_errors	IQGAP3	HGNC	ENSG00000183856	78	0	0.00	240	40	14.29	-	-	-
KCNA4	0	genome.wustl.edu	37	11	30033730	30033730	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	30033730	30033730	A	T	SNP	KCNA4	ENST00000328224	human	ensembl	69_37n	-1	known	missense	c.496	p.Y166N	1.000	NULL	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255	35	0	0.00	32	8	20.00	-	-	-
KCNJ10	0	genome.wustl.edu	37	1	160011189	160011189	+	Silent	SNP	A	A	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	160011189	160011189	A	G	SNP	KCNJ10	ENST00000368089	human	ensembl	69_37n	-1	known	silent	c.1134	p.N378	0.414	pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2,prints_K_chnl_inward-rec_Kir1.2,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ10	HGNC	ENSG00000177807	36	0	0.00	55	10	15.38	-	-	-
KIAA1549L	0	genome.wustl.edu	37	11	33596315	33596315	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	33596315	33596315	A	G	SNP	KIAA1549L	ENST00000389726	human	ensembl	69_37n	+1	known	missense	c.3425	p.N1142S	1.000	NULL	NULL	-	no_errors	KIAA1549L	HGNC	ENSG00000110427	38	0	0.00	43	8	15.69	-	-	-
KPNA7	0	genome.wustl.edu	37	7	98782623	98782623	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	7	98782623	98782623	C	T	SNP	KPNA7	ENST00000327442	human	ensembl	69_37n	-1	known	missense	c.1063	p.G355R	0.995	superfamily_ARM-type_fold	pfam_Armadillo,pfam_HEAT,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA7	HGNC	ENSG00000185467	35	0	0.00	63	13	17.11	-	-	-
KRT76	0	genome.wustl.edu	37	12	53169205	53169205	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	53169205	53169205	C	T	SNP	KRT76	ENST00000332411	human	ensembl	69_37n	-1	known	missense	c.782	p.S261N	0.770	pfam_F,prints_Keratin_II	pfam_F,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT76	HGNC	ENSG00000185069	47	0	0.00	25	15	37.50	-	-	-
LCE3A	0	genome.wustl.edu	37	1	152595499	152595499	+	Silent	SNP	T	T	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	152595499	152595499	T	G	SNP	LCE3A	ENST00000335674	human	ensembl	69_37n	-1	known	silent	c.81	p.P27	0.002	NULL	NULL	-	no_errors	LCE3A	HGNC	ENSG00000185962	41	0	0.00	134	19	12.42	-	-	-
LRRC15	0	genome.wustl.edu	37	3	194081730	194081730	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	3	194081730	194081730	C	T	SNP	LRRC15	ENST00000439944	human	ensembl	69_37n	-1	known	missense	c.61	p.A21T	0.707	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC15	HGNC	ENSG00000172061	22	0	0.00	23	6	20.69	-	-	-
LRRC66	0	genome.wustl.edu	37	4	52861775	52861775	+	Silent	SNP	A	A	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	4	52861775	52861775	A	T	SNP	LRRC66	ENST00000343457	human	ensembl	69_37n	-1	known	silent	c.1413	p.P471	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC66	HGNC	ENSG00000188993	41	0	0.00	68	17	20.00	-	-	-
MMP9	0	genome.wustl.edu	37	20	44639885	44639885	+	Silent	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	20	44639885	44639885	C	T	SNP	MMP9	ENST00000372330	human	ensembl	69_37n	+1	known	silent	c.753	p.D251	1.000	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin/matrixin_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin/matrixin_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A_matrixin	-	no_errors	MMP9	HGNC	ENSG00000100985	17	0	0.00	11	6	35.29	-	-	-
MRPS5	0	genome.wustl.edu	37	2	95775737	95775737	+	Silent	SNP	T	T	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	2	95775737	95775737	T	C	SNP	MRPS5	ENST00000272418	human	ensembl	69_37n	-1	known	silent	c.327	p.G109	0.998	NULL	pfam_Ribosomal_S5_C,pfam_Ribosomal_S5_N,superfamily_Ribosomal_S5_D2-typ_fold,pfscan_Ribosomal_S5_N	-	no_errors	MRPS5	HGNC	ENSG00000144029	52	0	0.00	64	39	37.86	-	-	-
MYOF	0	genome.wustl.edu	37	10	95072909	95072909	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	10	95072909	95072909	G	C	SNP	MYOF	ENST00000359263	human	ensembl	69_37n	-1	known	missense	c.5757	p.C1919W	0.961	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Peroxin/Ferlin,pfscan_C2_membr_targeting	-	no_errors	MYOF	HGNC	ENSG00000138119	75	0	0.00	109	20	15.38	-	-	-
NCKAP5L	0	genome.wustl.edu	37	12	50188850	50188850	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	50188850	50188850	C	A	SNP	NCKAP5L	ENST00000433948	human	ensembl	69_37n	-1	putative	nonsense	c.1936	p.E646*	0.950	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NCKAP5L	HGNC	ENSG00000167566	33	0	0.00	13	10	43.48	-	-	-
NOS1	0	genome.wustl.edu	37	12	117691526	117691526	+	Silent	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	117691526	117691526	G	T	SNP	NOS1	ENST00000317775	human	ensembl	69_37n	-1	known	silent	c.2565	p.S855	0.016	pfam_Flavodoxin/NO_synth,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_met,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	45	0	0.00	27	25	48.08	-	-	-
NOTCH2	0	genome.wustl.edu	37	1	120458436	120458436	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	120458436	120458436	G	-	DEL	NOTCH2	ENST00000256646	human	ensembl	69_37n	-1	known	frame_shift_del	c.6909	p.I2304fs	0.957	pirsf_Notch,prints_Notch_2	pirsf_Notch,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250	24	0	0.00	15	16	48.48	-	-	-
NOTCH4	0	genome.wustl.edu	37	6	32188550	32188550	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	6	32188550	32188550	C	A	SNP	NOTCH4	ENST00000375023	human	ensembl	69_37n	-1	known	missense	c.905	p.C302F	1.000	pfam_EGF-like_dom,smart_EGF-like_Ca-bd,smart_EGF-like,pirsf_Notch,pfscan_EG-like_dom	pfam_EGF-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_4,prints_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301	26	0	0.00	44	19	30.16	-	-	-
OR8B2	0	genome.wustl.edu	37	11	124252388	124252388	+	Silent	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	124252388	124252388	G	A	SNP	OR8B2	ENST00000375013	human	ensembl	69_37n	-1	known	silent	c.852	p.L284	0.460	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR8B2	HGNC	ENSG00000204293	41	0	0.00	50	34	40.00	-	-	-
P2RX5	0	genome.wustl.edu	37	17	3593780	3593780	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	17	3593780	3593780	C	G	SNP	P2RX5	ENST00000435558	human	ensembl	69_37n	-1	known	missense	c.474	p.L158F	0.000	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X_purnocptor,prints_P2X5_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX5	HGNC	ENSG00000083454	24	0	0.00	35	18	33.96	-	-	-
PAPPA2	0	genome.wustl.edu	37	1	176564589	176564589	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	176564589	176564589	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	69_37n	+1	known	missense	c.1849	p.R617C	1.000	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl,superfamily_Complement_control_module,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	34	0	0.00	54	7	11.48	-	-	-
PCDHA1	0	genome.wustl.edu	37	5	140167566	140167566	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	5	140167566	140167566	C	T	SNP	PCDHA1	ENST00000504120	human	ensembl	69_37n	+1	known	missense	c.1691	p.A564V	0.003	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970	24	0	0.00	16	16	48.48	-	-	-
PCNXL4	0	genome.wustl.edu	37	14	60592455	60592455	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	14	60592455	60592455	A	C	SNP	PCNXL4	ENST00000404681	human	ensembl	69_37n	+1	known	missense	c.3181	p.I1061L	1.000	pfam_Pecanex	pfam_Pecanex	-	no_errors	PCNXL4	HGNC	ENSG00000126773	42	0	0.00	36	19	34.55	-	-	-
PCSK6	0	genome.wustl.edu	37	15	101910615	101910615	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	15	101910615	101910615	G	T	SNP	PCSK6	ENST00000348070	human	ensembl	69_37n	-1	known	nonsense	c.1643	p.S548*	0.857	pfam_PrprotnconvertsP,superfamily_Galactose-bd-like	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,pfam_PLAC,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EGF-like,prints_Peptidase_S8_subtilisin-rel,pfscan_PLAC	-	no_errors	PCSK6	HGNC	ENSG00000140479	26	0	0.00	28	7	20.00	-	-	-
PDGFB	0	genome.wustl.edu	37	22	39621808	39621808	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	22	39621808	39621808	G	A	SNP	PDGFB	ENST00000331163	human	ensembl	69_37n	-1	known	missense	c.646	p.R216C	1.000	NULL	pfam_PD_growth_factor,pfam_PDGF_N,smart_PD_growth_factor,pfscan_PD_growth_factor	-	no_errors	PDGFB	HGNC	ENSG00000100311	47	0	0.00	40	18	31.03	-	-	-
PEX1	0	genome.wustl.edu	37	7	92122328	92122328	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	7	92122328	92122328	G	C	SNP	PEX1	ENST00000248633	human	ensembl	69_37n	-1	known	missense	c.3146	p.A1049G	1.000	NULL	pfam_ATPase_AAA_core,pfam_Peroxisome_synth_fac_1_a/b,pfam_PEX-1N,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_Asp_de-COase-like_fold,smart_AAA+_ATPase	-	no_errors	PEX1	HGNC	ENSG00000127980	39	0	0.00	50	14	21.88	-	-	-
PEX26	0	genome.wustl.edu	37	22	18562666	18562666	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	22	18562666	18562666	G	C	SNP	PEX26	ENST00000329627	human	ensembl	69_37n	+1	known	missense	c.257	p.C86S	1.000	pfam_Pex26	pfam_Pex26	-	no_errors	PEX26	HGNC	ENSG00000215193	55	0	0.00	80	24	23.08	-	-	-
PHLDA1	0	genome.wustl.edu	37	12	76424952	76424952	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	76424952	76424952	C	G	SNP	PHLDA1	ENST00000266671	human	ensembl	69_37n	-1	known	missense	c.570	p.Q190H	0.996	smart_Pleckstrin_homology	smart_Pleckstrin_homology	-	no_errors	PHLDA1	HGNC	ENSG00000139289	25	0	0.00	23	6	20.69	-	-	-
PIPSL	0	genome.wustl.edu	37	10	95721266	95721266	+	RNA	DEL	C	C	-			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	10	95721266	95721266	C	-	DEL	PIPSL	ENST00000480546	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.852	-	-	-	no_errors	PIPSL	HGNC	ENSG00000180764	43	0	0.00	32	9	21.43	-	-	-
PPP1R15B	0	genome.wustl.edu	37	1	204379798	204379798	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	204379798	204379798	C	G	SNP	PPP1R15B	ENST00000367188	human	ensembl	69_37n	-1	known	missense	c.742	p.V248L	0.006	pfam_Prot_Pase1_reg-su15B_N	pfam_Prot_Pase1_reg-su15B_N,pfam_Prot_Pase1_reg-su15A/B_C	-	no_errors	PPP1R15B	HGNC	ENSG00000158615	31	0	0.00	60	7	10.45	-	-	-
PTPRB	0	genome.wustl.edu	37	12	70970306	70970306	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	12	70970306	70970306	C	G	SNP	PTPRB	ENST00000334414	human	ensembl	69_37n	-1	known	missense	c.2698	p.G900R	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	41	0	0.00	72	8	10.00	-	-	-
RHBDF2	0	genome.wustl.edu	37	17	74469974	74469974	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	17	74469974	74469974	C	A	SNP	RHBDF2	ENST00000313080	human	ensembl	69_37n	-1	known	nonsense	c.1672	p.E558*	1.000	NULL	pfam_Rhomboid_SP,pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDF2	HGNC	ENSG00000129667	26	0	0.00	31	5	13.89	-	-	-
RNF208	0	genome.wustl.edu	37	9	140115554	140115554	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	9	140115554	140115554	G	C	SNP	RNF208	ENST00000391553	human	ensembl	69_37n	-1	known	missense	c.111	p.H37Q	1.000	NULL	pfscan_Znf_RING	-	no_errors	RNF208	HGNC	ENSG00000212864	16	0	0.00	4	11	73.33	-	-	-
RPLP0P2	0	genome.wustl.edu	37	11	61404585	61404585	+	RNA	SNP	C	C	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	61404585	61404585	C	G	SNP	RPLP0P2	ENST00000496593	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742	27	0	0.00	35	9	20.45	-	-	-
RTN4	0	genome.wustl.edu	37	2	55252437	55252437	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	2	55252437	55252437	C	G	SNP	RTN4	ENST00000337526	human	ensembl	69_37n	-1	known	missense	c.2798	p.S933T	0.000	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN4	HGNC	ENSG00000115310	50	0	0.00	52	15	22.39	-	-	-
RYR1	0	genome.wustl.edu	37	19	38979876	38979876	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	19	38979876	38979876	G	T	SNP	RYR1	ENST00000359596	human	ensembl	69_37n	+1	known	missense	c.5607	p.E1869D	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	54	0	0.00	64	10	13.51	-	-	-
SCML4	0	genome.wustl.edu	37	6	108067977	108067977	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	6	108067977	108067977	C	T	SNP	SCML4	ENST00000369021	human	ensembl	69_37n	-1	known	missense	c.316	p.V106I	0.989	pfam_DUF3588	pfam_DUF3588	-	no_errors	SCML4	HGNC	ENSG00000146285	14	0	0.00	23	6	20.69	-	-	-
SCUBE3	0	genome.wustl.edu	37	6	35213839	35213839	+	Silent	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	6	35213839	35213839	C	T	SNP	SCUBE3	ENST00000394681	human	ensembl	69_37n	+1	known	silent	c.2766	p.A922	0.992	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_EGF-like_Ca-bd,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EGF-like_dom,pfam_CUB,superfamily_CUB,superfamily_Growth_fac_rcpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_CUB,prints_Thrombomodulin,pfscan_CUB,pfscan_EG-like_dom	-	no_errors	SCUBE3	HGNC	ENSG00000146197	52	0	0.00	53	13	19.40	-	-	-
SETD2	0	genome.wustl.edu	37	3	47164556	47164556	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	3	47164556	47164556	T	G	SNP	SETD2	ENST00000409792	human	ensembl	69_37n	-1	known	missense	c.1570	p.N524H	1.000	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,superfamily_Ferritin/RR-like,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_Rsp5_WWP,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_Rsp5_WWP	-	no_errors	SETD2	HGNC	ENSG00000181555	44	0	0.00	50	15	23.08	-	-	-
SHISA7	0	genome.wustl.edu	37	19	55952018	55952018	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	19	55952018	55952018	C	T	SNP	SHISA7	ENST00000416792	human	ensembl	69_37n	-1	novel	missense	c.260	p.R87H	0.880	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SHISA7	HGNC	ENSG00000187902	36	0	0.00	55	7	11.29	-	-	-
SLC36A1	0	genome.wustl.edu	37	5	150846797	150846797	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	5	150846797	150846797	G	T	SNP	SLC36A1	ENST00000243389	human	ensembl	69_37n	+1	known	nonsense	c.457	p.G153*	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A1	HGNC	ENSG00000123643	87	0	0.00	74	24	24.49	-	-	-
SLC38A7	0	genome.wustl.edu	37	16	58712260	58712260	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	16	58712260	58712260	C	A	SNP	SLC38A7	ENST00000219320	human	ensembl	69_37n	-1	known	missense	c.588	p.E196D	1.000	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A7	HGNC	ENSG00000103042	59	0	0.00	46	17	26.98	-	-	-
SLC9A3	0	genome.wustl.edu	37	5	485334	485334	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	5	485334	485334	C	T	SNP	SLC9A3	ENST00000264938	human	ensembl	69_37n	-1	known	missense	c.688	p.V230M	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,superfamily_Reg_factor_effector_bac,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A3	HGNC	ENSG00000066230	42	0	0.00	55	27	32.93	-	-	-
SPTB	0	genome.wustl.edu	37	14	65267588	65267588	+	Splice_Site	SNP	T	T	G			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	14	65267588	65267588	T	G	SNP	SPTB	ENST00000389722	human	ensembl	69_37n	-1	known	splice_site	c.764-2	e7-2	1.000	-	-	-	no_errors	SPTB	HGNC	ENSG00000070182	41	0	0.00	51	17	25.00	-	-	-
ST6GALNAC1	0	genome.wustl.edu	37	17	74623249	74623249	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	17	74623249	74623249	C	T	SNP	ST6GALNAC1	ENST00000156626	human	ensembl	69_37n	-1	known	missense	c.1072	p.G358R	0.020	pfam_Glyco_trans_29	pfam_Glyco_trans_29	-	no_errors	ST6GALNAC1	HGNC	ENSG00000070526	12	0	0.00	31	10	24.39	-	-	-
STAM2	0	genome.wustl.edu	37	2	153000517	153000517	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	2	153000517	153000517	T	A	SNP	STAM2	ENST00000263904	human	ensembl	69_37n	-1	known	missense	c.528	p.L176F	1.000	pfam_Ubiquitin-int_motif,superfamily_SH3_domain,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	pfam_VHS,pfam_SH3_domain,pfam_SH3_2,pfam_Ubiquitin-int_motif,superfamily_ENTH_VHS,superfamily_SH3_domain,smart_VHS_subgr,smart_Ubiquitin-int_motif,smart_SH3_domain,pfscan_SH3_domain,pfscan_Ubiquitin-int_motif,pfscan_VHS,prints_SH3_domain,prints_p67phox	-	no_errors	STAM2	HGNC	ENSG00000115145	79	0	0.00	89	59	39.86	-	-	-
TCHH	0	genome.wustl.edu	37	1	152081930	152081930	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	1	152081930	152081930	C	T	SNP	TCHH	ENST00000368804	human	ensembl	69_37n	-1	known	missense	c.3763	p.D1255N	0.001	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	TCHH	HGNC	ENSG00000159450	42	0	0.00	121	22	15.38	-	-	-
TMEM218	0	genome.wustl.edu	37	11	124971139	124971140	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	124971139	124971140	-	A	INS	TMEM218	ENST00000455225	human	ensembl	69_37n	-1	known	frame_shift_ins	c.171_170	p.R59fs	0.993:0.998	NULL	NULL	-	no_errors	TMEM218	HGNC	ENSG00000150433	35	0	0.00	60	12	16.67	-	-	-
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	34	0	0.00	14	25	62.50	-	-	-
USP28	0	genome.wustl.edu	37	11	113704197	113704197	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	11	113704197	113704197	G	A	SNP	USP28	ENST00000003302	human	ensembl	69_37n	-1	known	missense	c.704	p.P235L	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,superfamily_UBA-like,pfscan_Peptidase_C19	-	no_errors	USP28	HGNC	ENSG00000048028	49	0	0.00	28	34	54.84	-	-	-
ZNF44	0	genome.wustl.edu	37	19	12384316	12384316	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	19	12384316	12384316	G	A	SNP	ZNF44	ENST00000393337	human	ensembl	69_37n	-1	known	missense	c.898	p.P300S	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF44	HGNC	ENSG00000197857	72	0	0.00	91	38	29.46	-	-	-
ZNF511	0	genome.wustl.edu	37	10	135165568	135165568	+	Silent	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	10	135165568	135165568	G	T	SNP	ZNF511	ENST00000368554	human	ensembl	69_37n	+1	known	silent	c.663	p.L221	0.000	NULL	smart_Znf_C2H2-like	-	no_errors	ZNF511	HGNC	ENSG00000198546	26	0	0.00	25	5	16.67	-	-	-
ZNF511	0	genome.wustl.edu	37	10	135165631	135165631	+	Silent	SNP	C	C	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	10	135165631	135165631	C	T	SNP	ZNF511	ENST00000368554	human	ensembl	69_37n	+1	known	silent	c.726	p.G242	0.000	NULL	smart_Znf_C2H2-like	-	no_errors	ZNF511	HGNC	ENSG00000198546	23	0	0.00	24	5	17.24	-	-	-
ZNF552	0	genome.wustl.edu	37	19	58319711	58319711	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	19	58319711	58319711	G	T	SNP	ZNF552	ENST00000391701	human	ensembl	69_37n	-1	known	missense	c.921	p.H307Q	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF552	HGNC	ENSG00000178935	71	0	0.00	57	14	19.72	-	-	-
ZNF729	0	genome.wustl.edu	37	19	22497241	22497241	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	19	22497241	22497241	T	C	SNP	ZNF729	ENST00000357491	human	ensembl	69_37n	+1	known	missense	c.1022	p.I341T	0.022	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_stop_codon	ZNF729	HGNC	ENSG00000196350	18	0	0.00	7	5	41.67	-	-	-
ZP2	0	genome.wustl.edu	37	16	21221500	21221500	+	Silent	SNP	G	G	A			TCGA-E9-A244-01A-11D-A167-09	TCGA-E9-A244-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9edf63e8-ae94-4b2f-8521-b56dadc21cd5	c067e16d-40af-44b1-bb55-b8c71ed021d3	16	21221500	21221500	G	A	SNP	ZP2	ENST00000219593	human	ensembl	69_37n	-1	known	silent	c.165	p.C55	0.573	NULL	pfam_Zona_pellucida_Endoglin/CD105,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105,prints_Endoglin/CD105_subgr	-	no_errors	ZP2	HGNC	ENSG00000103310	39	0	0.00	68	16	19.05	-	-	-
