Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS8	0	genome.wustl.edu	37	11	130286095	130286095	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	11	130286095	130286095	G	A	SNP	ADAMTS8	ENST00000257359	human	ensembl	69_37n	-1	known	silent	c.1227	p.S409	0.394	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS8,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS8	HGNC	ENSG00000134917	26	0	0.00	43	15	25.86	-	-	-
ATM	0	genome.wustl.edu	37	11	108218045	108218045	+	Missense_Mutation	SNP	A	A	G			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	11	108218045	108218045	A	G	SNP	ATM	ENST00000278616	human	ensembl	69_37n	+1	known	missense	c.8624	p.N2875S	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	113	0	0.00	21	39	65.00	-	-	-
CD79B	0	genome.wustl.edu	37	17	62007651	62007651	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	17	62007651	62007651	G	A	SNP	CD79B	ENST00000392795	human	ensembl	69_37n	-1	known	silent	c.216	p.S72	0.000	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM,pfscan_Ig-like	-	no_errors	CD79B	HGNC	ENSG00000007312	113	0	0.00	75	39	34.21	-	-	-
COL5A3	0	genome.wustl.edu	37	19	10087234	10087234	+	Silent	SNP	C	C	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	19	10087234	10087234	C	T	SNP	COL5A3	ENST00000264828	human	ensembl	69_37n	-1	known	silent	c.3342	p.P1114	0.943	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573	35	0	0.00	27	19	41.30	-	-	-
COL6A5	0	genome.wustl.edu	37	3	130202881	130202881	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	3	130202881	130202881	G	C	SNP	COL6A5	ENST00000432398	human	ensembl	69_37n	+1	known	missense	c.7577	p.W2526S	0.181	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	82	0	0.00	59	37	38.54	-	-	-
CUBN	0	genome.wustl.edu	37	10	16942845	16942845	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	10	16942845	16942845	G	A	SNP	CUBN	ENST00000377833	human	ensembl	69_37n	-1	known	missense	c.8189	p.T2730I	0.191	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_CUB,superfamily_Growth_fac_rcpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_CUB,pfscan_CUB,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	112	0	0.00	76	106	58.24	-	-	-
DCC	0	genome.wustl.edu	37	18	50450083	50450083	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	18	50450083	50450083	G	C	SNP	DCC	ENST00000442544	human	ensembl	69_37n	+1	known	missense	c.704	p.G235A	1.000	pfscan_Ig-like	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DCC	HGNC	ENSG00000187323	73	0	0.00	79	49	38.28	-	-	-
DPYSL3	0	genome.wustl.edu	37	5	146777319	146777319	+	Silent	SNP	G	G	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	5	146777319	146777319	G	T	SNP	DPYSL3	ENST00000398514	human	ensembl	69_37n	-1	known	silent	c.1371	p.G457	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657	43	0	0.00	41	24	36.92	-	-	-
ENTPD6	0	genome.wustl.edu	37	20	25205861	25205861	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	20	25205861	25205861	C	G	SNP	ENTPD6	ENST00000376652	human	ensembl	69_37n	+1	known	missense	c.1264	p.Q422E	0.026	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD6	HGNC	ENSG00000197586	50	0	0.00	60	49	44.95	-	-	-
FAM86B1	0	genome.wustl.edu	37	8	12043032	12043032	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	8	12043032	12043032	C	T	SNP	FAM86B1	ENST00000431227	human	ensembl	69_37n	-1	known	missense	c.745	p.V249M	1.000	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	FAM86B1	HGNC	ENSG00000186523	13	0	0.00	10	7	41.18	-	-	-
FLG	0	genome.wustl.edu	37	1	152284604	152284604	+	Missense_Mutation	SNP	C	C	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	1	152284604	152284604	C	A	SNP	FLG	ENST00000368799	human	ensembl	69_37n	-1	known	missense	c.2758	p.A920S	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	302	0	0.00	294	196	39.84	-	-	-
FOXD4	0	genome.wustl.edu	37	9	117506	117506	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	9	117506	117506	G	A	SNP	FOXD4	ENST00000382500	human	ensembl	69_37n	-1	known	missense	c.614	p.P205L	0.737	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4	HGNC	ENSG00000170122	12	0	0.00	12	6	33.33	-	-	-
GTPBP8	0	genome.wustl.edu	37	3	112710242	112710242	+	Silent	SNP	T	T	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	3	112710242	112710242	T	C	SNP	GTPBP8	ENST00000471627	human	ensembl	69_37n	+1	known	silent	c.396	p.P132	0.000	NULL	NULL	-	no_errors	GTPBP8	HGNC	ENSG00000163607	8	0	0.00	2	6	75.00	-	-	-
HSDL2	0	genome.wustl.edu	37	9	115200812	115200812	+	Nonsense_Mutation	SNP	A	A	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	9	115200812	115200812	A	T	SNP	HSDL2	ENST00000398805	human	ensembl	69_37n	+1	known	nonsense	c.700	p.K234*	0.999	NULL	pfam_SCP2_sterol-bd_dom,pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,prints_Glc/ribitol_DH	-	no_errors	HSDL2	HGNC	ENSG00000119471	59	0	0.00	67	42	38.53	-	-	-
ILF3	0	genome.wustl.edu	37	19	10798193	10798193	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	19	10798193	10798193	C	G	SNP	ILF3	ENST00000449870	human	ensembl	69_37n	+1	known	missense	c.2243	p.S748C	1.000	NULL	pfam_DZF,pfam_Ds-RNA-bd,smart_DZF,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	-	no_errors	ILF3	HGNC	ENSG00000129351	29	0	0.00	19	14	41.18	-	-	-
ITGBL1	0	genome.wustl.edu	37	13	102344973	102344973	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	13	102344973	102344973	G	A	SNP	ITGBL1	ENST00000376180	human	ensembl	69_37n	+1	known	missense	c.1054	p.G352R	0.999	pfam_EGF_extracell	pfam_EGF_extracell,smart_EGF-like	-	no_errors	ITGBL1	HGNC	ENSG00000198542	100	0	0.00	86	64	42.38	-	-	-
KCNN3	0	genome.wustl.edu	37	1	154842243	154842243	+	Silent	SNP	A	A	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	1	154842243	154842243	A	C	SNP	KCNN3	ENST00000271915	human	ensembl	69_37n	-1	known	silent	c.198	p.L66	0.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_Ion_trans_2,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603	21	0	0.00	56	27	32.53	-	-	-
KCNN3	0	genome.wustl.edu	37	1	154842244	154842244	+	Missense_Mutation	SNP	A	A	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	1	154842244	154842244	A	T	SNP	KCNN3	ENST00000271915	human	ensembl	69_37n	-1	known	missense	c.197	p.L66H	0.166	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_Ion_trans_2,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603	21	0	0.00	58	25	30.12	-	-	-
KIAA0947	0	genome.wustl.edu	37	5	5457497	5457497	+	Silent	SNP	G	G	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	5	5457497	5457497	G	T	SNP	KIAA0947	ENST00000296564	human	ensembl	69_37n	+1	known	silent	c.744	p.T248	0.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	62	0	0.00	52	33	38.82	-	-	-
KRT34	0	genome.wustl.edu	37	17	39535625	39535625	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	17	39535625	39535625	G	T	SNP	KRT34	ENST00000394001	human	ensembl	69_37n	-1	known	missense	c.982	p.L328M	1.000	pfam_F,prints_Keratin_I	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT34	HGNC	ENSG00000131737	271	0	0.00	270	101	27.22	-	-	-
LRRTM1	0	genome.wustl.edu	37	2	80530639	80530639	+	Nonsense_Mutation	SNP	G	G	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	2	80530639	80530639	G	T	SNP	LRRTM1	ENST00000295057	human	ensembl	69_37n	-1	known	nonsense	c.306	p.C102*	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	73	0	0.00	22	38	63.33	-	-	-
MST1P9	0	genome.wustl.edu	37	1	17085780	17085780	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	1	17085780	17085780	G	A	SNP	MST1P9	ENST00000334998	human	ensembl	69_37n	-1	known	silent	c.1041	p.D347	1.000	smart_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	MST1P9	HGNC	ENSG00000186715	21	0	0.00	34	6	15.00	-	-	-
MUC20	0	genome.wustl.edu	37	3	195452005	195452005	+	Silent	SNP	C	C	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	3	195452005	195452005	C	T	SNP	MUC20	ENST00000447234	human	ensembl	69_37n	+1	known	silent	c.531	p.S177	0.000	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945	21	0	0.00	28	13	31.71	-	-	-
MUC5B	0	genome.wustl.edu	37	11	1265475	1265475	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	11	1265475	1265475	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	69_37n	+1	known	silent	c.7374	p.P2458	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	54	0	0.00	49	36	42.35	-	-	-
MYO6	0	genome.wustl.edu	37	6	76540247	76540247	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	6	76540247	76540247	C	T	SNP	MYO6	ENST00000369981	human	ensembl	69_37n	+1	known	missense	c.376	p.H126Y	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586	95	0	0.00	25	56	69.14	-	-	-
NALCN	0	genome.wustl.edu	37	13	101936304	101936304	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	13	101936304	101936304	G	C	SNP	NALCN	ENST00000251127	human	ensembl	69_37n	-1	known	missense	c.1114	p.R372G	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	38	0	0.00	48	12	20.00	-	-	-
ODZ4	0	genome.wustl.edu	37	11	78440581	78440581	+	Silent	SNP	C	C	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	11	78440581	78440581	C	T	SNP	ODZ4	ENST00000278550	human	ensembl	69_37n	-1	known	silent	c.3246	p.P1082	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ4	HGNC	ENSG00000149256	84	0	0.00	116	26	18.31	-	-	-
PIGO	0	genome.wustl.edu	37	9	35095509	35095509	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	9	35095509	35095509	G	A	SNP	PIGO	ENST00000341666	human	ensembl	69_37n	-1	known	silent	c.54	p.Y18	0.099	NULL	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGO	HGNC	ENSG00000165282	20	0	0.00	46	21	31.34	-	-	-
PLBD2	0	genome.wustl.edu	37	12	113825554	113825554	+	Missense_Mutation	SNP	A	A	G			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	12	113825554	113825554	A	G	SNP	PLBD2	ENST00000280800	human	ensembl	69_37n	+1	known	missense	c.1445	p.N482S	1.000	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD2	HGNC	ENSG00000151176	70	0	0.00	50	20	28.57	-	-	-
PLXNA4	0	genome.wustl.edu	37	7	131848966	131848966	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	7	131848966	131848966	C	T	SNP	PLXNA4	ENST00000321063	human	ensembl	69_37n	-1	known	missense	c.4435	p.G1479S	0.997	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semaphorin/CD100_Ag,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNA4	HGNC	ENSG00000221866	101	0	0.00	72	44	37.93	-	-	-
PPP1R9A	0	genome.wustl.edu	37	7	94540068	94540068	+	Missense_Mutation	SNP	C	C	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	7	94540068	94540068	C	A	SNP	PPP1R9A	ENST00000289495	human	ensembl	69_37n	+1	known	missense	c.643	p.P215T	0.953	NULL	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528	76	0	0.00	73	50	40.65	-	-	-
QSER1	0	genome.wustl.edu	37	11	32955077	32955078	+	Frame_Shift_Ins	INS	-	-	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	11	32955077	32955078	-	A	INS	QSER1	ENST00000399302	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1886_1887	p.E632fs	0.958:0.967	NULL	NULL	-	no_errors	QSER1	HGNC	ENSG00000060749	38	0	0.00	29	18	38.30	-	-	-
RB1CC1	0	genome.wustl.edu	37	8	53569852	53569852	+	Missense_Mutation	SNP	T	T	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	8	53569852	53569852	T	C	SNP	RB1CC1	ENST00000025008	human	ensembl	69_37n	-1	known	missense	c.2537	p.N846S	0.995	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	81	0	0.00	61	32	34.41	-	-	-
RNF215	0	genome.wustl.edu	37	22	30775717	30775718	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	22	30775717	30775718	CA	-	DEL	RNF215	ENST00000382363	human	ensembl	69_37n	-1	known	frame_shift_del	c.1094_1093	p.C365fs	1.000:1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF215	HGNC	ENSG00000099999	75	0	0.00	20	29	54.72	-	-	-
SEMA5A	0	genome.wustl.edu	37	5	9108318	9108318	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	5	9108318	9108318	G	A	SNP	SEMA5A	ENST00000382496	human	ensembl	69_37n	-1	known	silent	c.2007	p.C669	0.092	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semaphorin/CD100_Ag,pfam_Thrombospondin_1_rpt,superfamily_Semaphorin/CD100_Ag,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Thrombospondin_1_rpt,pfscan_Semaphorin/CD100_Ag,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	52	0	0.00	44	29	39.73	-	-	-
SERPINE2	0	genome.wustl.edu	37	2	224863029	224863031	+	In_Frame_Del	DEL	TTG	TTG	-			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	2	224863029	224863031	TTG	-	DEL	SERPINE2	ENST00000258405	human	ensembl	69_37n	-1	known	in_frame_del	c.290_288	p.N96in_frame_del	1.000:1.000:1.000	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINE2	HGNC	ENSG00000135919	132	0	0.00	38	44	52.38	-	-	-
SLC16A9	0	genome.wustl.edu	37	10	61412689	61412689	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	10	61412689	61412689	G	A	SNP	SLC16A9	ENST00000395347	human	ensembl	69_37n	-1	known	silent	c.1371	p.T457	0.991	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A9	HGNC	ENSG00000165449	64	0	0.00	18	24	57.14	-	-	-
SLC9C1	0	genome.wustl.edu	37	3	111996653	111996653	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	3	111996653	111996653	G	T	SNP	SLC9C1	ENST00000305815	human	ensembl	69_37n	-1	known	missense	c.373	p.H125N	0.991	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139	66	0	0.00	50	34	40.48	-	-	-
SNX30	0	genome.wustl.edu	37	9	115567232	115567232	+	Silent	SNP	T	T	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	9	115567232	115567232	T	C	SNP	SNX30	ENST00000374232	human	ensembl	69_37n	+1	known	silent	c.333	p.Y111	0.996	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,pfam_Vps5_C,pfam_BAR_dom,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX30	HGNC	ENSG00000148158	112	0	0.00	35	99	73.88	-	-	-
SSH2	0	genome.wustl.edu	37	17	28022486	28022486	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	17	28022486	28022486	G	A	SNP	SSH2	ENST00000269033	human	ensembl	69_37n	-1	known	silent	c.267	p.N89	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298	115	0	0.00	72	27	27.27	-	-	-
TNR	0	genome.wustl.edu	37	1	175372511	175372511	+	Silent	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	1	175372511	175372511	G	A	SNP	TNR	ENST00000263525	human	ensembl	69_37n	-1	known	silent	c.741	p.D247	1.000	pfam_EGF_extracell,smart_EGF-like	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147	45	0	0.00	16	33	67.35	-	-	-
TTC38	0	genome.wustl.edu	37	22	46685729	46685729	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	22	46685729	46685729	G	A	SNP	TTC38	ENST00000445282	human	ensembl	69_37n	+1	known	missense	c.1075	p.V359I	0.971	NULL	NULL	-	no_errors	TTC38	HGNC	ENSG00000075234	56	0	0.00	17	34	66.67	-	-	-
TTC39C	0	genome.wustl.edu	37	18	21698089	21698089	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	18	21698089	21698089	G	A	SNP	TTC39C	ENST00000317571	human	ensembl	69_37n	+1	known	missense	c.1079	p.G360D	1.000	pfam_OMP_IML2_mit/TPR_39,pfam_Cohesin_loading_factor	pfam_OMP_IML2_mit/TPR_39,pfam_Cohesin_loading_factor	-	no_errors	TTC39C	HGNC	ENSG00000168234	101	0	0.00	85	36	29.75	-	-	-
WBSCR28	0	genome.wustl.edu	37	7	73279928	73279928	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	7	73279928	73279928	G	T	SNP	WBSCR28	ENST00000320531	human	ensembl	69_37n	+1	known	missense	c.523	p.V175L	0.009	NULL	NULL	-	no_errors	WBSCR28	HGNC	ENSG00000175877	123	0	0.00	108	71	39.66	-	-	-
ZBTB5	0	genome.wustl.edu	37	9	37441075	37441075	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A1J6-01A-11D-A188-09	TCGA-EW-A1J6-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d95c5cb1-d081-47fa-8ac0-1ade7652a0af	59bd462d-a2b2-4736-9a1f-f5658c82e15f	9	37441075	37441075	G	C	SNP	ZBTB5	ENST00000307750	human	ensembl	69_37n	-1	known	missense	c.1474	p.Q492E	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB5	HGNC	ENSG00000168795	62	0	0.00	50	25	32.89	-	-	-
