Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
NCOA5	57727	broad.mit.edu	37	20	44698855	44698855	+	Missense_Mutation	SNP	A	A	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr20:44698855A>G	ENST00000290231.6	-	3	523	c.359T>C	c.(358-360)aTg>aCg	p.M120T		NM_020967.2	NP_066018.1	Q9HCD5	NCOA5_HUMAN	nuclear receptor coactivator 5	120	Arg/Asp-rich (mixed charge).|Transcription repression.				regulation of transcription, DNA-dependent|transcription, DNA-dependent|translation	nucleus	aminoacyl-tRNA ligase activity|ATP binding			central_nervous_system(1)|endometrium(2)|kidney(3)|large_intestine(5)|liver(1)|lung(5)|ovary(1)|skin(2)|urinary_tract(1)	21		Myeloproliferative disorder(115;0.0122)				GTACCTGTACATAGGATCTCG	0.403000													20	30					0	0	1	0	0
FGR	2268	broad.mit.edu	37	1	27949604	27949604	+	Missense_Mutation	SNP	T	T	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:27949604T>G	ENST00000374005.3	-	4	566	c.278A>C	c.(277-279)gAg>gCg	p.E93A	FGR_ENST00000545953.1_Missense_Mutation_p.E93A|FGR_ENST00000399173.1_Missense_Mutation_p.E93A|FGR_ENST00000374004.1_Missense_Mutation_p.E93A	NM_005248.2	NP_005239.1	P09769	FGR_HUMAN	feline Gardner-Rasheed sarcoma viral oncogene homolog	93	SH3.				platelet activation|response to virus	cytosol	ATP binding|non-membrane spanning protein tyrosine kinase activity			breast(1)|endometrium(2)|kidney(1)|large_intestine(3)|lung(4)|prostate(1)|skin(4)	16		all_lung(284;2.05e-05)|Colorectal(325;3.46e-05)|Lung NSC(340;3.67e-05)|Renal(390;0.00121)|Breast(348;0.0021)|Ovarian(437;0.00503)|Myeloproliferative disorder(586;0.0255)|all_neural(195;0.0381)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0416)|OV - Ovarian serous cystadenocarcinoma(117;1.25e-24)|Colorectal(126;1.24e-08)|COAD - Colon adenocarcinoma(152;1.7e-06)|BRCA - Breast invasive adenocarcinoma(304;0.00244)|KIRC - Kidney renal clear cell carcinoma(1967;0.0027)|STAD - Stomach adenocarcinoma(196;0.00303)|READ - Rectum adenocarcinoma(331;0.0419)		GAGGTCATCCTCAGTTCGAGC	0.562000													14	48					0	0	1	0	0
UST	10090	broad.mit.edu	37	6	149340286	149340286	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr6:149340286G>T	ENST00000367463.4	+	6	796	c.693G>T	c.(691-693)gaG>gaT	p.E231D		NM_005715.2	NP_005706.1	Q9Y2C2	UST_HUMAN	uronyl-2-sulfotransferase	231					protein sulfation	Golgi membrane|integral to membrane	sulfotransferase activity			breast(1)|endometrium(3)|large_intestine(4)|lung(2)|ovary(2)	12		Ovarian(120;0.0907)		OV - Ovarian serous cystadenocarcinoma(155;1.78e-10)|GBM - Glioblastoma multiforme(68;0.138)		ATATCAATGAGTGTATTCTTG	0.408000													27	54					1.33986e-20	1.68166e-20	1	1	0
SLC44A5	204962	broad.mit.edu	37	1	75677213	75677213	+	Missense_Mutation	SNP	T	T	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:75677213T>G	ENST00000370855.5	-	23	2100	c.1987A>C	c.(1987-1989)Att>Ctt	p.I663L	SLC44A5_ENST00000370859.3_Missense_Mutation_p.I663L|SLC44A5_ENST00000535611.1_Missense_Mutation_p.I533L	NM_152697.4	NP_689910.2	Q8NCS7	CTL5_HUMAN	solute carrier family 44, member 5	663						integral to membrane|plasma membrane	choline transmembrane transporter activity			kidney(1)|large_intestine(13)|lung(35)|ovary(2)|prostate(1)|skin(6)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	61						CCATGTGCAATCAGGTAAGAC	0.383000													24	59					0	0	1	0	0
HLA-DMA	3108	broad.mit.edu	37	6	32917487	32917487	+	Nonsense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr6:32917487G>A	ENST00000374843.4	-	3	638	c.553C>T	c.(553-555)Cag>Tag	p.Q185*	HLA-DMA_ENST00000464392.1_5'UTR|XXbac-BPG181M17.5_ENST00000429234.1_Intron|HLA-DMA_ENST00000395305.3_Nonsense_Mutation_p.Q90*|HLA-DMA_ENST00000395303.3_Nonsense_Mutation_p.Q151*	NM_006120.3	NP_006111.2	Q31604	Q31604_HUMAN	major histocompatibility complex, class II, DM alpha	185						integral to membrane|MHC class II protein complex				kidney(1)|large_intestine(2)|lung(8)	11						GAAAAGGCCTGGAAGCTGAGT	0.488000													14	58					0	0	1	0	0
LRRC7	57554	broad.mit.edu	37	1	70505430	70505430	+	Nonsense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:70505430G>A	ENST00000310961.5	+	22	4242	c.3824G>A	c.(3823-3825)tGg>tAg	p.W1275*	LRRC7_ENST00000415775.2_Nonsense_Mutation_p.W554*|LRRC7_ENST00000035383.5_Nonsense_Mutation_p.W1270*			Q96NW7	LRRC7_HUMAN	leucine rich repeat containing 7	1270						centrosome|focal adhesion|nucleolus	protein binding			breast(11)|central_nervous_system(3)|cervix(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(1)|kidney(7)|large_intestine(25)|liver(3)|lung(81)|ovary(9)|pancreas(1)|prostate(2)|skin(2)|stomach(1)|upper_aerodigestive_tract(4)|urinary_tract(2)	162						CCTGCAGACTGGAGACAACAG	0.448000													16	108					0	0	1	0	0
NBPF1	55672	broad.mit.edu	37	1	16918653	16918653	+	Splice_Site	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:16918653C>T	ENST00000430580.2	-	6	853		c.e6+1			NM_017940.3	NP_060410.2	Q3BBV0	NBPF1_HUMAN	neuroblastoma breakpoint family, member 1							cytoplasm									UCEC - Uterine corpus endometrioid carcinoma (279;0.00459)|BRCA - Breast invasive adenocarcinoma(304;7.52e-06)|COAD - Colon adenocarcinoma(227;1.05e-05)|Kidney(64;0.00016)|KIRC - Kidney renal clear cell carcinoma(64;0.00258)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.179)		TCTTAACTTACTGTTGTGAAA	0.418000													7	65					0	0	1	0	0
FAM129C	199786	broad.mit.edu	37	19	17662618	17662618	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:17662618G>A	ENST00000332386.5	+	16	2005	c.1867G>A	c.(1867-1869)Gaa>Aaa	p.E623K	FAM129C_ENST00000601861.1_Intron|FAM129C_ENST00000352727.3_Missense_Mutation_p.E587K|FAM129C_ENST00000600871.1_Missense_Mutation_p.E541K|FAM129C_ENST00000599124.1_Missense_Mutation_p.E556K|FAM129C_ENST00000449408.2_Intron|FAM129C_ENST00000599164.1_Missense_Mutation_p.E592K|FAM129C_ENST00000335393.4_Intron	NM_001098524.1	NP_001091994.1	Q86XR2	NIBL2_HUMAN	family with sequence similarity 129, member C	0										autonomic_ganglia(1)|breast(1)|central_nervous_system(1)|endometrium(1)|large_intestine(8)|liver(2)|lung(14)|ovary(1)|skin(3)|stomach(1)	33						ggctgagcgggaaggaggggc	0.507000													6	19					0	0	1	0	0
PHRF1	57661	broad.mit.edu	37	11	611697	611697	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:611697G>A	ENST00000264555.5	+	18	4998	c.4870G>A	c.(4870-4872)Gtg>Atg	p.V1624M	PHRF1_ENST00000416188.2_Missense_Mutation_p.V1623M|PHRF1_ENST00000533464.1_Missense_Mutation_p.V1620M|PHRF1_ENST00000413872.2_Missense_Mutation_p.V1622M	NM_020901.2	NP_065952.2	Q9P1Y6	PHRF1_HUMAN	PHD and ring finger domains 1	1624							RNA polymerase binding|zinc ion binding			breast(1)|cervix(3)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|lung(13)|urinary_tract(2)	28						GAAGGCGTACGTGGACAAGTA	0.607000													10	31					0	0	1	0	0
GABRA4	2557	broad.mit.edu	37	4	46976251	46976251	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr4:46976251G>A	ENST00000264318.3	-	6	1701	c.719C>T	c.(718-720)aCg>aTg	p.T240M		NM_000809.3|NM_001204266.1|NM_001204267.1	NP_000800.2|NP_001191195.1|NP_001191196.1	P48169	GBRA4_HUMAN	gamma-aminobutyric acid (GABA) A receptor, alpha 4	240					gamma-aminobutyric acid signaling pathway	cell junction|chloride channel complex|integral to plasma membrane|postsynaptic membrane	benzodiazepine receptor activity|chloride channel activity|extracellular ligand-gated ion channel activity|GABA-A receptor activity	p.T240M(1)		NS(2)|breast(1)|central_nervous_system(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(9)|lung(17)|ovary(2)|prostate(3)|skin(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	45					Alprazolam(DB00404)|Ethchlorvynol(DB00189)|Flunitrazepam(DB01544)|Flurazepam(DB00690)|Lorazepam(DB00186)|Meprobamate(DB00371)|Midazolam(DB00683)	CATCTCACCCGTAATTGATTT	0.368000													23	72					0	0	1	0	0
ACSM2A	123876	broad.mit.edu	37	16	20480877	20480877	+	Missense_Mutation	SNP	C	C	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr16:20480877C>G	ENST00000573854.1	+	4	546	c.432C>G	c.(430-432)gaC>gaG	p.D144E	ACSM2A_ENST00000396104.2_Missense_Mutation_p.D144E|ACSM2A_ENST00000424070.1_Missense_Mutation_p.D144E|ACSM2A_ENST00000219054.6_Missense_Mutation_p.D144E|ACSM2A_ENST00000536134.1_5'UTR|ACSM2A_ENST00000417235.2_Missense_Mutation_p.D65E|ACSM2A_ENST00000575690.1_Missense_Mutation_p.D144E|ACSM2A_ENST00000575558.1_3'UTR	NM_001010845.2	NP_001010845.1	Q08AH3	ACS2A_HUMAN	acyl-CoA synthetase medium-chain family member 2A	144					fatty acid metabolic process	mitochondrial matrix	ATP binding|butyrate-CoA ligase activity|metal ion binding			breast(2)|central_nervous_system(2)|endometrium(1)|kidney(1)|large_intestine(3)|lung(34)|ovary(1)|skin(6)|stomach(1)	51						AATCCACTGACATACTGTATA	0.428000													25	92					0	0	1	0	0
LMAN1L	79748	broad.mit.edu	37	15	75111615	75111615	+	Splice_Site	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr15:75111615T>A	ENST00000309664.5	+	6	857		c.e6+2		LMAN1L_ENST00000379709.3_Silent_p.G240G	NM_021819.2	NP_068591.2	Q9HAT1	LMA1L_HUMAN	lectin, mannose-binding, 1 like							ER-Golgi intermediate compartment membrane|integral to membrane	sugar binding			NS(2)|breast(1)|endometrium(1)|kidney(1)|large_intestine(3)|lung(8)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	19						CCCTGGCAGGTGAGGATCCCA	0.577000													22	96					0	0	1	0	0
TCP11L2	255394	broad.mit.edu	37	12	106715424	106715424	+	Missense_Mutation	SNP	C	C	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:106715424C>G	ENST00000546625.1	+	5	734	c.575C>G	c.(574-576)cCc>cGc	p.P192R	TCP11L2_ENST00000552690.1_3'UTR|TCP11L2_ENST00000299045.3_Missense_Mutation_p.P192R|TCP11L2_ENST00000547153.1_Missense_Mutation_p.P192R			Q8N4U5	T11L2_HUMAN	t-complex 11, testis-specific-like 2	192										endometrium(2)|kidney(2)|large_intestine(5)|ovary(3)|prostate(1)|urinary_tract(2)	15						CTGTGTGCTCCCGTGCGAGAT	0.488000													15	56					0	0	1	0	0
MTF1	4520	broad.mit.edu	37	1	38280891	38280891	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:38280891C>A	ENST00000373036.4	-	11	2319	c.2179G>T	c.(2179-2181)Gac>Tac	p.D727Y		NM_005955.2	NP_005946.2	Q14872	MTF1_HUMAN	metal-regulatory transcription factor 1	727						nucleus	DNA binding|protein binding|sequence-specific DNA binding transcription factor activity|transcription coactivator activity|zinc ion binding			endometrium(3)|kidney(5)|large_intestine(6)|liver(1)|lung(12)|ovary(2)|pancreas(1)|prostate(1)	31	Acute lymphoblastic leukemia(166;0.074)|all_hematologic(146;0.197)	Myeloproliferative disorder(586;0.0255)				GACGGGGTGTCCAGGCTCTGG	0.547000													22	71					1.55795e-14	1.8973e-14	1	1	0
PKD1L2	114780	broad.mit.edu	37	16	81232395	81232395	+	Missense_Mutation	SNP	A	A	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr16:81232395A>G	ENST00000599697.1	-	7	1414	c.1415T>C	c.(1414-1416)aTc>aCc	p.I472T	PKD1L2_ENST00000525539.1_RNA|PKD1L2_ENST00000337114.4_RNA			Q7Z442	PK1L2_HUMAN	polycystic kidney disease 1-like 2	472	REJ.				neuropeptide signaling pathway	integral to membrane	calcium ion binding|ion channel activity|sugar binding			breast(2)|central_nervous_system(2)|endometrium(2)|haematopoietic_and_lymphoid_tissue(2)|kidney(2)|large_intestine(9)|lung(20)|ovary(2)|pancreas(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	44						AGCCAATGAGATGGTGATCAA	0.552000													11	80					0	0	1	0	0
NOP2	4839	broad.mit.edu	37	12	6675948	6675948	+	Silent	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:6675948T>C	ENST00000541778.1	-	3	632	c.144A>G	c.(142-144)cgA>cgG	p.R48R	NOP2_ENST00000537442.1_Silent_p.R48R|NOP2_ENST00000322166.5_Silent_p.R48R|NOP2_ENST00000399466.2_Silent_p.R48R|NOP2_ENST00000382421.3_Silent_p.R48R|NOP2_ENST00000542015.1_Intron|NOP2_ENST00000545915.1_Silent_p.R48R|NOP2_ENST00000540228.1_Silent_p.R48R|NOP2_ENST00000545200.1_Silent_p.R48R			P46087	NOP2_HUMAN	NOP2 nucleolar protein	48					positive regulation of cell proliferation|rRNA processing	nucleolus	protein binding|RNA binding|S-adenosylmethionine-dependent methyltransferase activity			breast(1)|kidney(2)|large_intestine(5)|lung(8)|ovary(2)|upper_aerodigestive_tract(1)	19						CTTACCTCTTTCGAGCACGAC	0.393000													4	12					0	0	1	0	0
KRTAP5-11	440051	broad.mit.edu	37	11	71293642	71293642	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:71293642C>A	ENST00000398530.1	-	1	279	c.242G>T	c.(241-243)gGc>gTc	p.G81V	KRTAP5-11_ENST00000526239.1_Intron|AP000867.1_ENST00000343767.3_Intron	NM_001005405.2	NP_001005405.1	Q6L8G4	KR511_HUMAN	keratin associated protein 5-11	81	6 X 4 AA repeats of C-C-X-P.					keratin filament				endometrium(1)|large_intestine(2)|lung(6)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)	12						CTGGGAGCAGCCACAAGAACC	0.622000													34	125					1.99505e-19	2.4787e-19	1	1	0
CEP170B	283638	broad.mit.edu	37	14	105355939	105355939	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr14:105355939G>T	ENST00000453495.1	+	13	4058	c.3830G>T	c.(3829-3831)cGc>cTc	p.R1277L	CEP170B_ENST00000556508.1_Missense_Mutation_p.R1206L|CEP170B_ENST00000414716.3_Intron|CEP170B_ENST00000418279.1_Intron					centrosomal protein 170B																		AAACACACACGCTCCCACACC	0.687000													8	30					9.70103e-10	1.13641e-09	1	1	0
RBM10	8241	broad.mit.edu	37	X	47045191	47045191	+	Splice_Site	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chrX:47045191T>A	ENST00000377604.3	+	21	3172		c.e21+2		RBM10_ENST00000468791.1_Intron|RBM10_ENST00000345781.6_Splice_Site|RBM10_ENST00000329236.7_Splice_Site	NM_001204467.1|NM_001204468.1|NM_005676.4	NP_001191396.1|NP_001191397.1|NP_005667.2	P98175	RBM10_HUMAN	RNA binding motif protein 10						mRNA processing|RNA splicing	chromatin remodeling complex	nucleotide binding|RNA binding|zinc ion binding			breast(3)|central_nervous_system(1)|cervix(1)|endometrium(8)|large_intestine(10)|liver(1)|lung(14)|ovary(2)|pancreas(1)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(3)	48						GACATGGAGGTGAGGTGTGAC	0.542000													7	11					0	0	1	0	0
RRP1	8568	broad.mit.edu	37	21	45217430	45217430	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr21:45217430G>A	ENST00000497547.1	+	6	667	c.550G>A	c.(550-552)Gag>Aag	p.E184K	RRP1_ENST00000471909.1_3'UTR	NM_003683.5	NP_003674.1	P56182	RRP1_HUMAN	ribosomal RNA processing 1	184					rRNA processing	nucleolus|preribosome, small subunit precursor				central_nervous_system(1)|kidney(1)|lung(4)|stomach(2)	8				COAD - Colon adenocarcinoma(84;0.00753)|Colorectal(79;0.0157)|STAD - Stomach adenocarcinoma(101;0.171)		GGGCGCCGAGGAGGTGAGGCT	0.637000													18	64					0	0	1	0	0
NBPF10	100132406	broad.mit.edu	37	1	145296463	145296463	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:145296463G>T	ENST00000342960.5	+	3	420	c.385G>T	c.(385-387)Gcc>Tcc	p.A129S	NBPF10_ENST00000369338.1_Intron|NBPF10_ENST00000369339.2_Intron|RP11-458D21.5_ENST00000468030.1_3'UTR	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	129										NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		GCATCTCCAGGCCCTCCTCAC	0.567000													39	132					2.23852e-25	2.86811e-25	1	1	0
KCNC2	3747	broad.mit.edu	37	12	75601607	75601607	+	Nonsense_Mutation	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:75601607T>A	ENST00000549446.1	-	2	837	c.157A>T	c.(157-159)Aag>Tag	p.K53*	KCNC2_ENST00000341669.3_Nonsense_Mutation_p.K53*|KCNC2_ENST00000540018.1_Nonsense_Mutation_p.K53*|KCNC2_ENST00000298972.1_Nonsense_Mutation_p.K53*|KCNC2_ENST00000548513.1_Nonsense_Mutation_p.K53*|KCNC2_ENST00000393288.2_Nonsense_Mutation_p.K53*|KCNC2_ENST00000550433.1_Nonsense_Mutation_p.K53*|KCNC2_ENST00000350228.2_Nonsense_Mutation_p.K53*	NM_001260497.1|NM_139137.3	NP_001247426.1|NP_631875.1	Q96PR1	KCNC2_HUMAN	potassium voltage-gated channel, Shaw-related subfamily, member 2	53					energy reserve metabolic process|regulation of insulin secretion	voltage-gated potassium channel complex	voltage-gated potassium channel activity			breast(3)|endometrium(4)|kidney(1)|large_intestine(9)|liver(1)|lung(28)|ovary(1)|pancreas(2)|prostate(2)|skin(2)|upper_aerodigestive_tract(1)	54						ggctgcagcTTGTCGCCCGCC	0.731000													6	13					0	0	1	0	0
PEAR1	375033	broad.mit.edu	37	1	156876638	156876638	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:156876638G>A	ENST00000338302.3	+	7	835	c.610G>A	c.(610-612)Gcc>Acc	p.A204T	PEAR1_ENST00000292357.7_Missense_Mutation_p.A204T			Q5VY43	PEAR1_HUMAN	platelet endothelial aggregation receptor 1	204						integral to membrane				breast(1)|central_nervous_system(2)|endometrium(4)|large_intestine(6)|lung(22)|ovary(4)|skin(3)|upper_aerodigestive_tract(1)	43	all_hematologic(923;0.0839)|Hepatocellular(266;0.158)					CCAGACTGGAGCCTGCTTCTG	0.612000													11	56					0	0	1	0	0
SUMO3	6612	broad.mit.edu	37	21	46229022	46229022	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr21:46229022C>T	ENST00000332859.6	-	3	322	c.162G>A	c.(160-162)atG>atA	p.M54I	SUMO3_ENST00000397898.3_Missense_Mutation_p.M54I|SUMO3_ENST00000411651.2_Missense_Mutation_p.M92I|SUMO3_ENST00000479153.1_5'UTR|SUMO3_ENST00000397893.3_Missense_Mutation_p.M54I	NM_006936.2	NP_008867.2	P55854	SUMO3_HUMAN	small ubiquitin-like modifier 3	54	Ubiquitin-like.				protein sumoylation	cytoplasm|kinetochore	protein binding			prostate(1)	1				Colorectal(79;0.058)		TGATCTGCCTCATTGACAAGC	0.542000													7	35					0	0	1	0	0
KIR2DL1	3802	broad.mit.edu	37	19	55285064	55285064	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:55285064C>T	ENST00000336077.6	+	3	390	c.350C>T	c.(349-351)cCt>cTt	p.P117L	KIR3DL1_ENST00000402254.2_Intron|KIR3DL1_ENST00000541392.1_Intron|KIR3DL1_ENST00000538269.1_Intron|KIR2DL4_ENST00000396284.2_Intron|CTB-61M7.1_ENST00000400864.3_RNA|KIR2DL1_ENST00000291633.7_Missense_Mutation_p.P117L|KIR2DL3_ENST00000434419.2_Intron	NM_014218.2	NP_055033.2	P43626	KI2L1_HUMAN	killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1	117					immune response|natural killer cell inhibitory signaling pathway	integral to plasma membrane	protein binding|receptor activity			breast(3)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(5)|lung(6)|prostate(1)|skin(1)	17				GBM - Glioblastoma multiforme(193;0.0192)		CCCAGTGACCCTCTGGACATC	0.517000													72	230					0	0	1	0	0
ZFP36L1	677	broad.mit.edu	37	14	69256600	69256600	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr14:69256600G>A	ENST00000439696.2	-	2	968	c.667C>T	c.(667-669)Ccc>Tcc	p.P223S	ZFP36L1_ENST00000555997.1_3'UTR|ZFP36L1_ENST00000336440.3_Missense_Mutation_p.P223S	NM_001244701.1|NM_004926.3	NP_001231630.1|NP_004917.2	Q07352	TISB_HUMAN	ZFP36 ring finger protein-like 1	223					regulation of mRNA stability	cytosol|nucleus	DNA binding|mRNA binding|protein binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			breast(4)|kidney(1)|large_intestine(1)|liver(2)|lung(9)|ovary(1)|prostate(2)|urinary_tract(1)	21				all cancers(60;0.00203)|BRCA - Breast invasive adenocarcinoma(234;0.00205)|OV - Ovarian serous cystadenocarcinoma(108;0.0401)		ATGGACGTGGGGCTGTCCAGC	0.647000											OREG0022753	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	28	94					0	0	1	0	0
LCA5L	150082	broad.mit.edu	37	21	40781904	40781904	+	Splice_Site	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr21:40781904C>A	ENST00000358268.2	-	9	1811		c.e9+1		LCA5L_ENST00000495240.1_Splice_Site|WRB_ENST00000541890.1_Intron|LCA5L_ENST00000288350.3_Splice_Site|LCA5L_ENST00000380671.2_Splice_Site			O95447	LCA5L_HUMAN	Leber congenital amaurosis 5-like											breast(1)|cervix(1)|endometrium(3)|large_intestine(8)|lung(4)|pancreas(2)|prostate(2)|skin(2)|urinary_tract(1)	24		Prostate(19;1.2e-06)				GTTAAAATTACCTTCATATTT	0.299000													3	26					0.004672	0.00474922	1	1	0
RCC2	55920	broad.mit.edu	37	1	17735597	17735597	+	Nonsense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:17735597G>A	ENST00000375436.4	-	13	1745	c.1558C>T	c.(1558-1560)Cga>Tga	p.R520*	RCC2_ENST00000375433.3_Nonsense_Mutation_p.R520*	NM_018715.3	NP_061185.1	Q9P258	RCC2_HUMAN	regulator of chromosome condensation 2	520					cell division|mitotic prometaphase	chromosome, centromeric region|cytosol|microtubule|nucleolus|spindle				breast(2)|endometrium(1)|kidney(3)|large_intestine(7)|lung(4)	17		Colorectal(325;0.000147)|Breast(348;0.00122)|Renal(390;0.00145)|all_lung(284;0.0054)|Lung NSC(340;0.00566)|Myeloproliferative disorder(586;0.0393)|Ovarian(437;0.0439)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00492)|BRCA - Breast invasive adenocarcinoma(304;7.69e-06)|COAD - Colon adenocarcinoma(227;1.19e-05)|Kidney(64;0.000189)|KIRC - Kidney renal clear cell carcinoma(64;0.00273)|STAD - Stomach adenocarcinoma(196;0.0135)|READ - Rectum adenocarcinoma(331;0.0656)|Lung(427;0.19)		CAGAGGGTTCGGGGGTTGTAT	0.532000													16	72					0	0	1	0	0
RASSF1	11186	broad.mit.edu	37	3	50369278	50369278	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr3:50369278C>A	ENST00000359365.4	-	4	578	c.472G>T	c.(472-474)Ggt>Tgt	p.G158C	RASSF1_ENST00000327761.3_Missense_Mutation_p.G88C|RASSF1_ENST00000395126.3_Missense_Mutation_p.G7C|RASSF1_ENST00000357043.2_Missense_Mutation_p.G162C	NM_001206957.1|NM_007182.4|NM_170714.1	NP_001193886.1|NP_009113.3|NP_733832.1	Q9NS23	RASF1_HUMAN	Ras association (RalGDS/AF-6) domain family member 1	162					cell cycle arrest|negative regulation of cell cycle arrest|positive regulation of protein ubiquitination|protein stabilization|Ras protein signal transduction|response to DNA damage stimulus	microtubule|microtubule cytoskeleton|microtubule organizing center|nucleus|spindle pole	identical protein binding|protein binding|protein N-terminus binding|zinc ion binding			lung(2)|ovary(1)|skin(1)|urinary_tract(1)	5				BRCA - Breast invasive adenocarcinoma(193;0.000278)|OV - Ovarian serous cystadenocarcinoma(275;0.0015)|KIRC - Kidney renal clear cell carcinoma(197;0.00551)|Kidney(197;0.00621)		GTGTAAGAACCGTCCTTGTTC	0.522000													8	32					0.000274275	0.000285897	1	1	0
PDGFRB	5159	broad.mit.edu	37	5	149502656	149502656	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr5:149502656G>T	ENST00000261799.4	-	15	2601	c.2132C>A	c.(2131-2133)cCc>cAc	p.P711H		NM_002609.3	NP_002600.1	P09619	PGFRB_HUMAN	platelet-derived growth factor receptor, beta polypeptide	711	Protein kinase.				aorta morphogenesis|cardiac myofibril assembly|hemopoiesis|metanephric glomerular capillary formation|metanephric glomerular mesangial cell proliferation involved in metanephros development|peptidyl-tyrosine phosphorylation|positive regulation of calcium ion import|positive regulation of chemotaxis|positive regulation of DNA biosynthetic process|positive regulation of ERK1 and ERK2 cascade|positive regulation of MAP kinase activity|positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway|positive regulation of mitosis|positive regulation of phosphatidylinositol 3-kinase cascade|positive regulation of reactive oxygen species metabolic process|positive regulation of smooth muscle cell migration|positive regulation of smooth muscle cell proliferation|protein autophosphorylation|regulation of actin cytoskeleton organization|retina vasculature development in camera-type eye|smooth muscle cell chemotaxis	apical plasma membrane|cytoplasm|integral to plasma membrane|nucleus	ATP binding|platelet activating factor receptor activity|platelet-derived growth factor beta-receptor activity|platelet-derived growth factor binding|platelet-derived growth factor receptor binding|vascular endothelial growth factor receptor activity			breast(3)|central_nervous_system(5)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(9)|kidney(3)|large_intestine(12)|lung(20)|ovary(3)|prostate(3)|skin(3)|stomach(6)|urinary_tract(1)	75		all_hematologic(541;0.224)	KIRC - Kidney renal clear cell carcinoma(527;0.000785)|Kidney(363;0.00101)		Becaplermin(DB00102)|Dasatinib(DB01254)|Imatinib(DB00619)|Sorafenib(DB00398)|Sunitinib(DB01268)	CTCCGCGCTGGGCGGGCGGCG	0.612000			T	"""ETV6, TRIP11, HIP1, RAB5EP, H4, NIN, HCMOGT-1, PDE4DIP"""	"""MPD, AML, CMML, CML"""								13	55					1.5842e-08	1.78768e-08	1	1	0
WDR73	84942	broad.mit.edu	37	15	85186921	85186921	+	Missense_Mutation	SNP	G	G	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr15:85186921G>C	ENST00000434634.2	-	8	977	c.917C>G	c.(916-918)aCa>aGa	p.T306R	WDR73_ENST00000398528.3_5'UTR	NM_032856.2	NP_116245.2	Q6P4I2	WDR73_HUMAN	WD repeat domain 73	306										cervix(1)|large_intestine(1)|lung(1)	3						ATCCCAAGATGTGGCATCATA	0.423000													3	8					0	0	1	0	0
ISG20	3669	broad.mit.edu	37	15	89195490	89195490	+	Missense_Mutation	SNP	G	G	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr15:89195490G>C	ENST00000306072.5	+	3	736	c.378G>C	c.(376-378)agG>agC	p.R126S	ISG20_ENST00000560741.1_Missense_Mutation_p.R126S|ISG20_ENST00000560746.1_3'UTR	NM_002201.4	NP_002192.2	Q96AZ6	ISG20_HUMAN	interferon stimulated exonuclease gene 20kDa	126					cell proliferation|DNA catabolic process, exonucleolytic|response to virus|RNA catabolic process|type I interferon-mediated signaling pathway	PML body	3'-5'-exoribonuclease activity|exoribonuclease II activity|metal ion binding|RNA binding|single-stranded DNA specific 3'-5' exodeoxyribonuclease activity			large_intestine(1)|lung(3)|prostate(1)	5	Lung NSC(78;0.0554)|all_lung(78;0.103)		BRCA - Breast invasive adenocarcinoma(143;0.12)			ACCACTGCAGGCGTGTCTCCC	0.612000													12	59					0	0	1	0	0
DUOXA1	90527	broad.mit.edu	37	15	45410220	45410220	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr15:45410220C>A	ENST00000267803.4	-	10	1438	c.1039G>T	c.(1039-1041)Gcg>Tcg	p.A347S	DUOXA1_ENST00000558996.1_3'UTR|DUOXA1_ENST00000559014.1_Missense_Mutation_p.A347S|DUOXA1_ENST00000430224.2_Missense_Mutation_p.A302S|DUOXA2_ENST00000323030.5_3'UTR	NM_144565.2	NP_653166.2	Q1HG43	DOXA1_HUMAN	dual oxidase maturation factor 1	0					protein transport	endoplasmic reticulum membrane|integral to membrane				endometrium(3)|haematopoietic_and_lymphoid_tissue(2)|kidney(3)|large_intestine(3)|lung(3)|ovary(1)|upper_aerodigestive_tract(1)	16		all_cancers(109;6.02e-08)|all_epithelial(112;1.83e-06)|Lung NSC(122;8.3e-05)|all_lung(180;0.000547)|Melanoma(134;0.0417)		all cancers(107;3.82e-18)|GBM - Glioblastoma multiforme(94;4.39e-07)|COAD - Colon adenocarcinoma(120;0.0676)|Colorectal(133;0.0686)		GCTGCTGGCGCGAGGCCTCGG	0.567000											OREG0023102	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	15	35					3.27435e-08	3.66132e-08	1	1	0
CCSER1	401145	broad.mit.edu	37	4	91229944	91229944	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr4:91229944G>A	ENST00000509176.1	+	2	797	c.509G>A	c.(508-510)cGt>cAt	p.R170H	CCSER1_ENST00000333691.8_Missense_Mutation_p.R170H|CCSER1_ENST00000432775.2_Missense_Mutation_p.R170H	NM_001145065.1	NP_001138537.1			coiled-coil serine-rich protein 1																		GACCAAACTCGTCGTTCTGTT	0.378000													8	40					0	0	1	0	0
KRTAP8-1	337879	broad.mit.edu	37	21	32185397	32185397	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr21:32185397C>T	ENST00000329621.4	-	1	173	c.142G>A	c.(142-144)Ggc>Agc	p.G48S		NM_175857.3	NP_787053.1	Q8IUC2	KRA81_HUMAN	keratin associated protein 8-1	48	12 X 2 AA repeats of G-[YCGS].					intermediate filament				central_nervous_system(1)|large_intestine(1)|lung(4)	6						GCCCCACAGCCGTTGTAGCCA	0.562000													14	64					0	0	1	0	0
MYL6	4637	broad.mit.edu	37	12	56552340	56552340	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:56552340G>A	ENST00000536128.1	+	1	195	c.155G>A	c.(154-156)gGg>gAg	p.G52E	MYL6_ENST00000547649.1_Intron|MYL6_ENST00000348108.4_Intron|MYL6_ENST00000551589.1_Intron|MYL6_ENST00000549566.1_Missense_Mutation_p.G52E|MYL6_ENST00000547408.1_Intron|MYL6_ENST00000549017.1_Intron|MYL6_ENST00000548400.1_Intron|MYL6_ENST00000548580.1_Intron|RP11-603J24.18_ENST00000548571.1_RNA|MYL6_ENST00000550697.1_Intron|MYL6_ENST00000548293.1_Intron|MYL6_ENST00000293422.5_Intron			P60660	MYL6_HUMAN	myosin, light chain 6, alkali, smooth muscle and non-muscle	0					axon guidance|muscle filament sliding|skeletal muscle tissue development	cytosol|unconventional myosin complex	actin-dependent ATPase activity|calcium ion binding|motor activity|structural constituent of muscle			large_intestine(1)|lung(1)|ovary(1)|prostate(3)|skin(1)	7			OV - Ovarian serous cystadenocarcinoma(18;0.0979)			GGCCCTGCGGGGAAGCGAGTC	0.597000													15	46					0	0	1	0	0
ATRX	546	broad.mit.edu	37	X	76939451	76939451	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chrX:76939451T>C	ENST00000373344.5	-	9	1511	c.1297A>G	c.(1297-1299)Aaa>Gaa	p.K433E	ATRX_ENST00000480283.1_5'UTR|ATRX_ENST00000395603.3_Missense_Mutation_p.K395E	NM_000489.3	NP_000480.2	P46100	ATRX_HUMAN	alpha thalassemia/mental retardation syndrome X-linked	433					DNA methylation|DNA recombination|DNA repair|regulation of transcription, DNA-dependent	nuclear heterochromatin	ATP binding|chromo shadow domain binding|DNA binding|DNA helicase activity|zinc ion binding	p.?(1)		bone(1)|breast(6)|central_nervous_system(31)|cervix(2)|endometrium(7)|haematopoietic_and_lymphoid_tissue(15)|kidney(14)|large_intestine(1)|liver(1)|lung(40)|ovary(2)|pancreas(13)|prostate(5)|skin(2)|upper_aerodigestive_tract(3)|urinary_tract(2)	145					Phosphatidylserine(DB00144)	TCTATGACTTTATGCTCTTTG	0.363000			"""Mis, F, N"""		"""Pancreatic neuroendocrine tumors, paediatric GBM"""		ATR-X (alpha thalassemia/mental retardation) syndrome						79	88					0	0	1	0	0
OR2H1	26716	broad.mit.edu	37	6	29429827	29429827	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr6:29429827G>A	ENST00000377136.1	+	4	746	c.281G>A	c.(280-282)gGa>gAa	p.G94E	OR2H1_ENST00000377133.1_Missense_Mutation_p.G94E|OR2H1_ENST00000377132.1_Missense_Mutation_p.G94E|OR2H1_ENST00000442615.1_Missense_Mutation_p.G94E|OR2H1_ENST00000473369.1_3'UTR|OR2H1_ENST00000396792.2_Missense_Mutation_p.G94E			Q9GZK4	OR2H1_HUMAN	olfactory receptor, family 2, subfamily H, member 1	94					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			large_intestine(5)|lung(12)	17						AGCTTCCTGGGATGCTCTGTC	0.567000													25	68					0	0	1	0	0
DMXL1	1657	broad.mit.edu	37	5	118451893	118451893	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr5:118451893G>T	ENST00000311085.8	+	7	685	c.605G>T	c.(604-606)tGg>tTg	p.W202L	DMXL1_ENST00000539542.1_Missense_Mutation_p.W202L	NM_005509.4	NP_005500.4	Q9Y485	DMXL1_HUMAN	Dmx-like 1	202										breast(3)|central_nervous_system(1)|endometrium(14)|kidney(4)|large_intestine(20)|liver(6)|lung(28)|ovary(2)|prostate(5)|skin(2)|upper_aerodigestive_tract(1)	86		all_cancers(142;0.0314)|all_epithelial(76;0.00559)|Prostate(80;0.11)|Breast(839;0.231)		OV - Ovarian serous cystadenocarcinoma(64;0.000563)|Epithelial(69;0.00179)|all cancers(49;0.0243)		GTAGAAAACTGGCGGACAGCT	0.353000													14	69					1.5842e-08	1.78768e-08	1	1	0
SPATA9	83890	broad.mit.edu	37	5	95018282	95018282	+	Nonsense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr5:95018282C>A	ENST00000274432.8	-	2	241	c.100G>T	c.(100-102)Gag>Tag	p.E34*	RFESD_ENST00000508206.1_Intron|SPATA9_ENST00000477047.2_5'UTR|SPATA9_ENST00000395899.3_Nonsense_Mutation_p.E34*	NM_031952.3	NP_114158.2	Q9BWV2	SPAT9_HUMAN	spermatogenesis associated 9	34					cell differentiation|multicellular organismal development|spermatogenesis	integral to membrane				large_intestine(3)|lung(4)	7		all_cancers(142;1.28e-06)|all_epithelial(76;1.55e-09)|all_lung(232;0.00307)|Lung NSC(167;0.00452)|Ovarian(225;0.00473)|Colorectal(57;0.0846)|Breast(839;0.198)		all cancers(79;8.91e-16)		TCTTTAAACTCATCTACAAGG	0.318000													14	57					6.72482e-11	8.10935e-11	1	1	0
PTGFRN	5738	broad.mit.edu	37	1	117491977	117491977	+	Silent	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:117491977G>A	ENST00000393203.2	+	4	1143	c.996G>A	c.(994-996)gcG>gcA	p.A332A		NM_020440.2	NP_065173.2	Q9P2B2	FPRP_HUMAN	prostaglandin F2 receptor inhibitor	332	Ig-like C2-type 3.					endoplasmic reticulum membrane|Golgi apparatus|integral to membrane	protein binding			NS(1)|breast(1)|endometrium(4)|large_intestine(10)|liver(1)|lung(22)|ovary(1)|prostate(4)|stomach(1)|upper_aerodigestive_tract(1)	46	Lung SC(450;0.225)	all_cancers(81;0.00104)|all_lung(203;8.97e-05)|all_epithelial(167;0.000139)|Lung NSC(69;0.000446)		Lung(183;0.0704)|LUSC - Lung squamous cell carcinoma(189;0.227)|Colorectal(144;0.248)		GCGTGTTGGCGCGGCTTGACC	0.582000													17	73					0	0	1	0	0
ZCWPW1	55063	broad.mit.edu	37	7	100017350	100017350	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr7:100017350T>C	ENST00000398027.2	-	4	432	c.185A>G	c.(184-186)aAg>aGg	p.K62R	ZCWPW1_ENST00000490721.1_5'UTR|ZCWPW1_ENST00000360951.4_Missense_Mutation_p.K62R|ZCWPW1_ENST00000324725.6_5'UTR	NM_017984.4	NP_060454.3	Q9H0M4	ZCPW1_HUMAN	zinc finger, CW type with PWWP domain 1	62							zinc ion binding			breast(1)|kidney(1)|large_intestine(5)|lung(6)|ovary(1)|prostate(1)|skin(1)	16	Lung NSC(181;0.0181)|all_lung(186;0.0284)|Esophageal squamous(72;0.0439)					TTCCTCTTTCTTCTTTAAACT	0.468000													10	59					0	0	1	0	0
SPATA31C1	441452	broad.mit.edu	37	9	90534212	90534212	+	RNA	SNP	A	A	G	rs654472	by1000genomes	TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr9:90534212A>G	ENST00000602681.1	+	0	958																											CCAGTGTCCAACAGGGCGGAG	0.582000													5	54					0	0	1	0	0
MAP4K3	8491	broad.mit.edu	37	2	39542450	39542450	+	Splice_Site	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr2:39542450C>A	ENST00000263881.3	-	13	1322		c.e13+1		MAP4K3_ENST00000341681.5_Splice_Site|MAP4K3_ENST00000536018.1_Splice_Site|MAP4K3_ENST00000437545.1_Splice_Site	NM_003618.3	NP_003609.2	Q8IVH8	M4K3_HUMAN	mitogen-activated protein kinase kinase kinase kinase 3						JNK cascade		ATP binding|protein binding|protein serine/threonine kinase activity|small GTPase regulator activity			NS(1)|endometrium(4)|kidney(2)|large_intestine(8)|lung(17)|ovary(4)|pancreas(1)|prostate(1)|skin(2)|stomach(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	44		all_hematologic(82;0.211)				TATATACTTACAGGTTATCTC	0.284000													13	60					0.000219431	0.000232673	1	1	0
PRSS35	167681	broad.mit.edu	37	6	84233317	84233317	+	Missense_Mutation	SNP	G	G	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr6:84233317G>C	ENST00000536636.1	+	3	502	c.157G>C	c.(157-159)Gat>Cat	p.D53H	PRSS35_ENST00000369700.3_Missense_Mutation_p.D53H	NM_001170423.1	NP_001163894.1	Q8N3Z0	PRS35_HUMAN	protease, serine, 35	53					proteolysis	extracellular region	serine-type endopeptidase activity			breast(2)|endometrium(2)|large_intestine(12)|lung(11)|ovary(2)|skin(2)|upper_aerodigestive_tract(1)	32		all_cancers(76;0.000113)|Acute lymphoblastic leukemia(125;1.09e-08)|all_hematologic(105;3.12e-05)|all_epithelial(107;0.0575)		BRCA - Breast invasive adenocarcinoma(397;0.0768)		ATTTGAGGCAGATGCTAAGAT	0.458000													6	95					0	0	1	0	0
FMO2	2327	broad.mit.edu	37	1	171168560	171168560	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:171168560T>C	ENST00000441535.1	+	5	677	c.560T>C	c.(559-561)aTc>aCc	p.I187T	FMO2_ENST00000209929.7_Missense_Mutation_p.I187T|RP1-127D3.4_ENST00000422841.1_RNA|FMO2_ENST00000529935.1_Intron|RP1-127D3.4_ENST00000445909.1_RNA|RP1-45C12.1_ENST00000455124.1_RNA|RP1-127D3.4_ENST00000445290.1_RNA	NM_001460.2	NP_001451.1	Q99518	FMO2_HUMAN	flavin containing monooxygenase 2 (non-functional)	187					drug metabolic process|NADPH oxidation|organic acid metabolic process|toxin metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|host cell microsome|integral to membrane|microsome	flavin adenine dinucleotide binding|flavin-containing monooxygenase activity|NADP binding			endometrium(2)|kidney(1)|large_intestine(5)|lung(7)|prostate(1)|skin(2)|stomach(3)|urinary_tract(1)	22	all_hematologic(923;0.0922)|Acute lymphoblastic leukemia(37;0.181)					GGAAAACGCATCCTGGTGATT	0.478000													21	83					0	0	1	0	0
HAS1	3036	broad.mit.edu	37	19	52220303	52220303	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:52220303G>T	ENST00000540069.2	-	3	903	c.843C>A	c.(841-843)agC>agA	p.S281R	HAS1_ENST00000601714.1_Missense_Mutation_p.S289R|HAS1_ENST00000222115.1_Missense_Mutation_p.S282R|HAS1_ENST00000594621.1_Missense_Mutation_p.S136R			Q92839	HAS1_HUMAN	hyaluronan synthase 1	282					cell adhesion	integral to plasma membrane	hyaluronan synthase activity|protein binding			breast(2)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(10)|lung(13)|ovary(1)|pancreas(1)|prostate(1)|skin(4)	40		all_neural(266;0.0189)|Medulloblastoma(540;0.146)		GBM - Glioblastoma multiforme(134;0.00102)|OV - Ovarian serous cystadenocarcinoma(262;0.0177)		AGTATCGCAGGCTGCTTAGGA	0.597000													29	73					2.2171e-23	2.81138e-23	1	1	0
CMKLR1	1240	broad.mit.edu	37	12	108686360	108686360	+	Missense_Mutation	SNP	A	A	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:108686360A>T	ENST00000397688.2	-	3	743	c.374T>A	c.(373-375)gTc>gAc	p.V125D	CMKLR1_ENST00000552995.1_Missense_Mutation_p.V125D|CMKLR1_ENST00000412676.1_Missense_Mutation_p.V127D|CMKLR1_ENST00000550402.1_Missense_Mutation_p.V127D|CMKLR1_ENST00000312143.7_Missense_Mutation_p.V127D	NM_004072.2	NP_004063.1	Q99788	CML1_HUMAN	chemokine-like receptor 1	127					chemotaxis|immune response|negative regulation of interleukin-12 production|negative regulation of NF-kappaB transcription factor activity|positive regulation of macrophage chemotaxis|regulation of calcium-mediated signaling|skeletal system development	integral to plasma membrane	chemokine receptor activity			endometrium(5)|large_intestine(3)|lung(20)|ovary(1)|pancreas(1)|prostate(2)|skin(2)|upper_aerodigestive_tract(3)	37						CAGCAGGAAGACGCTGGTGAA	0.557000													17	54					0	0	1	0	0
AK7	122481	broad.mit.edu	37	14	96864548	96864548	+	Missense_Mutation	SNP	C	C	T	rs140870082	byFrequency	TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr14:96864548C>T	ENST00000267584.4	+	2	286	c.242C>T	c.(241-243)aCg>aTg	p.T81M	AK7_ENST00000555570.1_Missense_Mutation_p.T81M|AK7_ENST00000554313.1_3'UTR	NM_152327.3	NP_689540.2	Q96M32	KAD7_HUMAN	adenylate kinase 7	81					cell projection organization	cytosol	adenylate kinase activity|ATP binding|cytidylate kinase activity			breast(2)|cervix(2)|endometrium(3)|large_intestine(8)|lung(11)|ovary(1)|prostate(2)|skin(1)|urinary_tract(1)	31		all_cancers(154;0.0482)|all_epithelial(191;0.128)|Melanoma(154;0.155)		Epithelial(152;0.134)|COAD - Colon adenocarcinoma(157;0.228)		ATTGTGGGCACGCTGTCCAAG	0.532000													20	58					0	0	1	0	0
C8orf76	84933	broad.mit.edu	37	8	124250098	124250098	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr8:124250098C>A	ENST00000276704.4	-	3	348	c.297G>T	c.(295-297)caG>caT	p.Q99H	ZHX1-C8ORF76_ENST00000357082.4_Missense_Mutation_p.Q67H|C8orf76_ENST00000521310.1_5'UTR	NM_032847.2	NP_116236.1	Q96K31	CH076_HUMAN	chromosome 8 open reading frame 76	99							binding			NS(1)|lung(9)|ovary(2)|prostate(1)|urinary_tract(4)	17	Lung NSC(37;1.25e-09)|Ovarian(258;0.0154)		STAD - Stomach adenocarcinoma(47;0.00527)			GACACCGAGCCTGACCTTCCT	0.428000													4	35					0.00024832	0.000261054	1	1	0
GOLGA2P9	440518	broad.mit.edu	37	19	22786174	22786174	+	RNA	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:22786174C>A	ENST00000599738.1	+	0	104				CTC-457E21.3_ENST00000600260.1_RNA																							GGCAGCATCCCCTGCATTCTG	0.577000													3	3					0.004672	0.00474922	1	1	0
OR10X1	128367	broad.mit.edu	37	1	158548799	158548799	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:158548799G>T	ENST00000368150.1	-	1	890	c.891C>A	c.(889-891)ttC>ttA	p.F297L		NM_001004477.1	NP_001004477.1	Q8NGY0	O10X1_HUMAN	olfactory receptor, family 10, subfamily X, member 1 (gene/pseudogene)	297					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			breast(1)|cervix(1)|endometrium(2)|large_intestine(6)|lung(22)|ovary(2)|skin(2)|urinary_tract(1)	37	all_hematologic(112;0.0378)					TGGGGCTGAGGAAGGGGGTAA	0.398000													29	141					1.04121e-07	1.15378e-07	1	1	0
PRKCSH	5589	broad.mit.edu	37	19	11559781	11559781	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:11559781G>T	ENST00000252455.2	+	15	1654	c.1318G>T	c.(1318-1320)Ggg>Tgg	p.G440W	PRKCSH_ENST00000587327.1_Missense_Mutation_p.G437W|PRKCSH_ENST00000592741.1_Missense_Mutation_p.G447W|PRKCSH_ENST00000589838.1_Missense_Mutation_p.G440W|PRKCSH_ENST00000412601.1_Missense_Mutation_p.G437W|PRKCSH_ENST00000591462.1_Missense_Mutation_p.G437W	NM_002743.2	NP_002734.2	P14314	GLU2B_HUMAN	protein kinase C substrate 80K-H	440	PRKCSH.				innate immune response|intracellular protein kinase cascade|post-translational protein modification|protein folding|protein N-linked glycosylation via asparagine	endoplasmic reticulum lumen	calcium ion binding|protein kinase C binding			breast(1)|central_nervous_system(1)|endometrium(1)|kidney(1)|large_intestine(2)|lung(7)|ovary(2)|pancreas(1)|prostate(3)	19						ACCCAAACTCGGGGGCTCTCC	0.647000													17	89					4.35082e-09	5.04859e-09	1	1	0
NBPF10	100132406	broad.mit.edu	37	1	145302760	145302760	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:145302760G>T	ENST00000342960.5	+	8	1233	c.1198G>T	c.(1198-1200)Gcc>Tcc	p.A400S	NBPF10_ENST00000369338.1_Missense_Mutation_p.A129S|NBPF10_ENST00000369339.2_Missense_Mutation_p.A129S|RP11-458D21.5_ENST00000468030.1_3'UTR	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	400										NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		GCATCTCCAGGCCCTCCTCAC	0.562000													11	290					9.16793e-09	1.05388e-08	1	1	0
ARHGAP19-SLIT1	100533184	broad.mit.edu	37	10	98989585	98989585	+	Missense_Mutation	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr10:98989585T>A	ENST00000453547.2	-	10	1330	c.1331A>T	c.(1330-1332)aAc>aTc	p.N444I	ARHGAP19_ENST00000487035.1_5'UTR|ARHGAP19_ENST00000355366.5_Missense_Mutation_p.N435I|ARHGAP19-SLIT1_ENST00000358308.3_Missense_Mutation_p.N415I|ARHGAP19_ENST00000358531.4_Missense_Mutation_p.N444I|ARHGAP19-SLIT1_ENST00000316676.8_Missense_Mutation_p.N444I|ARHGAP19_ENST00000371027.1_Missense_Mutation_p.N435I																							TGGAGTAGGGTTCTTCTTTTT	0.398000													19	94					0	0	1	0	0
TFRC	7037	broad.mit.edu	37	3	195779045	195779045	+	Missense_Mutation	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr3:195779045T>A	ENST00000360110.4	-	19	2220	c.2051A>T	c.(2050-2052)cAc>cTc	p.H684L	TFRC_ENST00000392396.3_Missense_Mutation_p.H684L|TFRC_ENST00000420415.1_Missense_Mutation_p.H603L|TFRC_ENST00000540528.1_3'UTR|TFRC_ENST00000535031.1_Missense_Mutation_p.H402L	NM_001128148.1	NP_001121620.1	P02786	TFR1_HUMAN	transferrin receptor	684	Ligand-binding.				cellular iron ion homeostasis|endocytosis|interspecies interaction between organisms|proteolysis|transferrin transport|transmembrane transport	coated pit|endosome|integral to plasma membrane|melanosome	peptidase activity|transferrin receptor activity			NS(1)|breast(2)|endometrium(1)|kidney(3)|large_intestine(4)|lung(10)|ovary(3)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	27	all_cancers(143;1.94e-08)|Ovarian(172;0.0634)|Breast(254;0.206)		Epithelial(36;1.36e-24)|all cancers(36;3.34e-22)|OV - Ovarian serous cystadenocarcinoma(49;1.17e-18)|LUSC - Lung squamous cell carcinoma(58;1.51e-06)|Lung(62;1.95e-06)	GBM - Glioblastoma multiforme(46;0.00233)		AGAGAGGAAGTGATACTCCAC	0.443000			T	BCL6	NHL								5	35					0	0	1	0	0
KLKB1	3818	broad.mit.edu	37	4	187158067	187158067	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr4:187158067C>T	ENST00000264690.6	+	5	648	c.461C>T	c.(460-462)aCg>aTg	p.T154M	KLKB1_ENST00000513864.1_Missense_Mutation_p.T154M	NM_000892.3	NP_000883.2	P03952	KLKB1_HUMAN	kallikrein B, plasma (Fletcher factor) 1	154	Apple 2.				blood coagulation, intrinsic pathway|Factor XII activation|fibrinolysis|plasminogen activation|positive regulation of fibrinolysis	cytoplasm|extracellular space|plasma membrane	serine-type endopeptidase activity			breast(2)|central_nervous_system(1)|endometrium(3)|kidney(1)|large_intestine(8)|lung(15)|ovary(3)|pancreas(1)|prostate(1)|skin(4)|upper_aerodigestive_tract(1)	40		all_cancers(14;1.55e-52)|all_epithelial(14;7.69e-39)|all_lung(41;1.34e-13)|Lung NSC(41;3.58e-13)|Melanoma(20;1.91e-06)|Colorectal(36;0.00664)|Hepatocellular(41;0.00886)|Renal(120;0.00988)|Prostate(90;0.00996)|all_hematologic(60;0.014)|all_neural(102;0.243)		OV - Ovarian serous cystadenocarcinoma(60;1.29e-10)|BRCA - Breast invasive adenocarcinoma(30;3.8e-05)|GBM - Glioblastoma multiforme(59;0.000131)|STAD - Stomach adenocarcinoma(60;0.000292)|LUSC - Lung squamous cell carcinoma(40;0.00241)|READ - Rectum adenocarcinoma(43;0.168)		TCATATGCCACGCAAACATTT	0.408000													9	44					0	0	1	0	0
CSMD3	114788	broad.mit.edu	37	8	113267555	113267555	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr8:113267555T>C	ENST00000297405.5	-	62	10208	c.9964A>G	c.(9964-9966)Ata>Gta	p.I3322V	CSMD3_ENST00000343508.3_Missense_Mutation_p.I3282V|CSMD3_ENST00000352409.3_Missense_Mutation_p.I3252V|CSMD3_ENST00000455883.2_Missense_Mutation_p.I3153V	NM_198123.1	NP_937756.1	Q7Z407	CSMD3_HUMAN	CUB and Sushi multiple domains 3	3322	Sushi 26.					integral to membrane|plasma membrane				breast(7)|central_nervous_system(6)|endometrium(44)|haematopoietic_and_lymphoid_tissue(8)|kidney(36)|large_intestine(72)|liver(5)|lung(389)|ovary(24)|prostate(6)|skin(23)|upper_aerodigestive_tract(19)|urinary_tract(7)	646						CCCACTAATATGAAAGGAAAA	0.403000										HNSCC(6;0.00088)|TCGA Ovarian(7;0.080)			18	47					0	0	1	0	0
OR2H1	26716	broad.mit.edu	37	6	29429828	29429828	+	Silent	SNP	A	A	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr6:29429828A>C	ENST00000377136.1	+	4	747	c.282A>C	c.(280-282)ggA>ggC	p.G94G	OR2H1_ENST00000377133.1_Silent_p.G94G|OR2H1_ENST00000377132.1_Silent_p.G94G|OR2H1_ENST00000442615.1_Silent_p.G94G|OR2H1_ENST00000473369.1_3'UTR|OR2H1_ENST00000396792.2_Silent_p.G94G			Q9GZK4	OR2H1_HUMAN	olfactory receptor, family 2, subfamily H, member 1	94					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			large_intestine(5)|lung(12)	17						GCTTCCTGGGATGCTCTGTCC	0.567000													27	67					0	0	1	0	0
MYO1F	4542	broad.mit.edu	37	19	8615202	8615202	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:8615202C>T	ENST00000338257.8	-	10	1210	c.943G>A	c.(943-945)Ggg>Agg	p.G315R		NM_012335.3	NP_036467.2	O00160	MYO1F_HUMAN	myosin IF	315	Myosin head-like.					unconventional myosin complex	actin binding|ATP binding|calmodulin binding|motor activity			breast(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(3)|kidney(6)|large_intestine(7)|lung(13)|ovary(3)|prostate(3)|skin(3)|urinary_tract(1)	42						TGCAGTCGCCCGCTGTCAATG	0.617000													5	19					0	0	1	0	0
CCNI	10983	broad.mit.edu	37	4	77976512	77976512	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr4:77976512T>C	ENST00000237654.4	-	6	1057	c.481A>G	c.(481-483)Act>Gct	p.T161A	CCNI_ENST00000537948.1_Missense_Mutation_p.T147A	NM_006835.2	NP_006826.1	Q14094	CCNI_HUMAN	cyclin I	161					spermatogenesis					NS(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(2)|lung(1)|ovary(1)|prostate(1)	9						TGAGGCCTAGTTGACACTGCA	0.378000													8	31					0	0	1	0	0
UEVLD	55293	broad.mit.edu	37	11	18568599	18568599	+	Splice_Site	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:18568599T>C	ENST00000396197.3	-	8	744		c.e8-2		UEVLD_ENST00000543987.1_Splice_Site|UEVLD_ENST00000320750.6_Splice_Site|UEVLD_ENST00000379387.4_Splice_Site|UEVLD_ENST00000541984.1_Intron|UEVLD_ENST00000535484.1_Splice_Site|UEVLD_ENST00000540666.1_Splice_Site	NM_001040697.2|NM_001261384.1	NP_001035787.1|NP_001248313.1	Q8IX04	UEVLD_HUMAN	UEV and lactate/malate dehyrogenase domains						cellular carbohydrate metabolic process|protein modification process|protein transport		binding|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor			endometrium(1)|kidney(1)|large_intestine(1)|lung(1)|prostate(1)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	8						CAGACAAATCTAGTGAATGAA	0.393000													10	44					0	0	1	0	0
OSBP2	23762	broad.mit.edu	37	22	31266432	31266432	+	Silent	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr22:31266432C>T	ENST00000332585.6	+	3	974	c.870C>T	c.(868-870)gaC>gaT	p.D290D	OSBP2_ENST00000401475.1_5'UTR|OSBP2_ENST00000382310.3_Silent_p.D290D|OSBP2_ENST00000446658.2_Silent_p.D290D|OSBP2_ENST00000407373.1_Silent_p.D117D|OSBP2_ENST00000403222.3_Silent_p.D125D|OSBP2_ENST00000437268.2_Silent_p.D32D	NM_030758.3	NP_110385.1	Q969R2	OSBP2_HUMAN	oxysterol binding protein 2	290					lipid transport	membrane	lipid binding			breast(3)|central_nervous_system(1)|endometrium(2)|kidney(2)|lung(6)|ovary(1)|skin(3)|urinary_tract(1)	19						CTGGGGACGACGACGAGGCTA	0.557000													5	46					0	0	1	0	0
GTF2F1	2962	broad.mit.edu	37	19	6380471	6380471	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:6380471C>T	ENST00000394456.5	-	13	1839	c.1375G>A	c.(1375-1377)Gtg>Atg	p.V459M	GTF2F1_ENST00000429701.2_Missense_Mutation_p.V374M	NM_002096.2	NP_002087.2	P35269	T2FA_HUMAN	general transcription factor IIF, polypeptide 1, 74kDa	459					mRNA capping|nuclear mRNA splicing, via spliceosome|positive regulation of transcription, DNA-dependent|positive regulation of viral transcription|response to virus|transcription elongation from RNA polymerase II promoter|transcription initiation from RNA polymerase II promoter|viral reproduction	cell junction|transcription factor TFIIF complex	catalytic activity|DNA binding|phosphatase activator activity|transcription coactivator activity|transcription factor binding			breast(2)|endometrium(3)|kidney(1)|large_intestine(6)|lung(4)	16						TAGCGGCGCACGGCATCCTCA	0.602000													16	112					0	0	1	0	0
PDE11A	50940	broad.mit.edu	37	2	178969162	178969162	+	Missense_Mutation	SNP	A	A	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr2:178969162A>C	ENST00000358450.4	-	2	127	c.29T>G	c.(28-30)tTc>tGc	p.F10C		NM_001077197.1	NP_001070665.1	Q9HCR9	PDE11_HUMAN	phosphodiesterase 11A	0					platelet activation|signal transduction	cytosol	3',5'-cyclic-AMP phosphodiesterase activity|3',5'-cyclic-GMP phosphodiesterase activity|metal ion binding			breast(2)|central_nervous_system(1)|endometrium(2)|kidney(2)|large_intestine(13)|lung(28)|ovary(4)|skin(3)|upper_aerodigestive_tract(3)	58			OV - Ovarian serous cystadenocarcinoma(117;0.00121)|Epithelial(96;0.00455)|all cancers(119;0.02)			CACATTTCTGAATAAAGGTCT	0.408000									Primary Pigmented Nodular Adrenocortical Disease, Familial				28	91					0	0	1	0	0
AMIGO2	347902	broad.mit.edu	37	12	47472393	47472393	+	Silent	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:47472393C>T	ENST00000266581.4	-	2	859	c.393G>A	c.(391-393)acG>acA	p.T131T	AMIGO2_ENST00000550413.1_Silent_p.T131T|AMIGO2_ENST00000429635.1_Silent_p.T131T|AMIGO2_ENST00000321382.3_Silent_p.T131T	NM_181847.4	NP_862830.1	Q86SJ2	AMGO2_HUMAN	adhesion molecule with Ig-like domain 2	131					heterophilic cell-cell adhesion|homophilic cell adhesion	integral to membrane|nucleus|plasma membrane				endometrium(2)|kidney(1)|large_intestine(8)|lung(3)|ovary(1)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	18	Renal(347;0.138)|Lung SC(27;0.192)					CATTTTTCACCGTCTTCAGCT	0.418000													25	100					0	0	1	0	0
ARHGEF12	23365	broad.mit.edu	37	11	120317782	120317782	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:120317782T>C	ENST00000397843.2	+	18	1743	c.1577T>C	c.(1576-1578)aTt>aCt	p.I526T	ARHGEF12_ENST00000532993.1_Missense_Mutation_p.I423T|ARHGEF12_ENST00000356641.3_Missense_Mutation_p.I507T	NM_015313.2	NP_056128.1	Q9NZN5	ARHGC_HUMAN	Rho guanine nucleotide exchange factor (GEF) 12	526	RGSL.				apoptosis|axon guidance|G-protein coupled receptor protein signaling pathway|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol|membrane	G-protein-coupled receptor binding|GTPase activator activity|Rho guanyl-nucleotide exchange factor activity			NS(1)|breast(5)|endometrium(6)|kidney(5)|large_intestine(13)|lung(23)|ovary(4)|pancreas(1)|prostate(1)|skin(2)	61		Breast(109;0.000813)|Medulloblastoma(222;0.0425)|Hepatocellular(160;0.0831)|all_hematologic(192;0.107)|all_neural(223;0.112)		BRCA - Breast invasive adenocarcinoma(274;4.88e-06)|OV - Ovarian serous cystadenocarcinoma(223;0.231)		GTTGCCAAAATTGAAGAAGTA	0.418000			T	MLL	AML								25	101					0	0	1	0	0
OPRK1	4986	broad.mit.edu	37	8	54142056	54142056	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr8:54142056C>A	ENST00000265572.3	-	4	1241	c.944G>T	c.(943-945)tGc>tTc	p.C315F	OPRK1_ENST00000524278.1_Missense_Mutation_p.C226F|RP11-162D9.3_ENST00000524425.1_RNA|OPRK1_ENST00000520287.1_Missense_Mutation_p.C315F	NM_000912.3	NP_000903.2	P41145	OPRK_HUMAN	opioid receptor, kappa 1	315					behavior|immune response|inhibition of adenylate cyclase activity by G-protein signaling pathway|sensory perception|synaptic transmission|viral genome replication	integral to plasma membrane	kappa-opioid receptor activity|protein binding			NS(2)|breast(3)|endometrium(3)|kidney(12)|large_intestine(7)|lung(8)|ovary(1)|prostate(1)|skin(5)|urinary_tract(1)	43		all_epithelial(80;0.066)|Lung NSC(129;0.0804)|all_lung(136;0.136)			Buprenorphine(DB00921)|Butorphanol(DB00611)|Cocaine(DB00907)|Codeine(DB00318)|Dezocine(DB01209)|Hydrocodone(DB00956)|Hydromorphone(DB00327)|Meperidine(DB00454)|Mirtazapine(DB00370)|Morphine(DB00295)|Nalbuphine(DB00844)|Naltrexone(DB00704)|Oxycodone(DB00497)|Pentazocine(DB00652)|Propoxyphene(DB00647)|Tramadol(DB00193)	TAAGGCGATGCAGAAGTAATA	0.517000													11	45					3.07112e-06	3.31357e-06	1	1	0
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T	rs121913529		TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:25398284C>T	ENST00000311936.3	-	2	226	c.35G>A	c.(34-36)gGt>gAt	p.G12D	KRAS_ENST00000256078.4_Missense_Mutation_p.G12D|KRAS_ENST00000557334.1_Missense_Mutation_p.G12D|KRAS_ENST00000556131.1_Missense_Mutation_p.G12D	NM_004985.3	NP_004976.2	P01116	RASK_HUMAN	Kirsten rat sarcoma viral oncogene homolog	12			G -> A (in a colorectal cancer sample; somatic mutation).|G -> C (in lung carcinoma; somatic mutation).|G -> D (in pancreatic carcinoma, GASC and lung carcinoma; somatic mutation).|G -> R (in lung cancer and bladder cancer; somatic mutation).|G -> S (in lung carcinoma and GASC; somatic mutation).|G -> V (in lung carcinoma, pancreatic carcinoma, colon cancer and GASC; somatic mutation).		activation of MAPKK activity|axon guidance|blood coagulation|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|nerve growth factor receptor signaling pathway|Ras protein signal transduction	plasma membrane	GTP binding|GTPase activity|protein binding	p.G12D(8562)|p.G12V(5775)|p.G12A(1407)|p.G12F(46)|p.G12L(8)|p.G12I(4)|p.G12E(3)|p.G12W(3)|p.G12Y(2)|p.G12fs*3(1)|p.G12C(1)|p.G12N(1)	UBE2L3/KRAS(2)	NS(6)|adrenal_gland(1)|autonomic_ganglia(3)|biliary_tract(532)|bone(2)|breast(32)|central_nervous_system(14)|cervix(50)|endometrium(411)|eye(4)|gastrointestinal_tract_(site_indeterminate)(7)|genital_tract(1)|haematopoietic_and_lymphoid_tissue(385)|kidney(8)|large_intestine(15267)|liver(29)|lung(3407)|oesophagus(16)|ovary(612)|pancreas(3739)|penis(1)|peritoneum(6)|prostate(96)|salivary_gland(6)|skin(45)|small_intestine(68)|soft_tissue(88)|stomach(207)|testis(17)|thymus(5)|thyroid(159)|upper_aerodigestive_tract(68)|urinary_tract(57)	25349	all_cancers(2;1e-35)|all_epithelial(2;1.97e-38)|all_lung(3;2.1e-23)|Lung NSC(3;1.16e-22)|Acute lymphoblastic leukemia(6;0.00231)|all_hematologic(7;0.00259)|Melanoma(3;0.0301)|Colorectal(261;0.11)|Ovarian(17;0.12)		OV - Ovarian serous cystadenocarcinoma(3;1.23e-21)|Epithelial(3;1.31e-20)|all cancers(3;5.45e-18)|STAD - Stomach adenocarcinoma(2;2.68e-05)			GCCTACGCCACCAGCTCCAAC	0.348000	G12A(KMS28BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12A(KPNSI9S_AUTONOMIC_GANGLIA)|G12A(MM1S_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12A(NCIH1573_LUNG)|G12A(NCIH2009_LUNG)|G12A(RERFLCAD1_LUNG)|G12A(RPMI8226_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12A(SW1116_LARGE_INTESTINE)|G12D(AGS_STOMACH)|G12D(ASPC1_PANCREAS)|G12D(COLO678_LARGE_INTESTINE)|G12D(HEC1A_ENDOMETRIUM)|G12D(HEC50B_ENDOMETRIUM)|G12D(HEYA8_OVARY)|G12D(HPAC_PANCREAS)|G12D(HPAFII_PANCREAS)|G12D(KARPAS620_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12D(KOPN8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12D(KP4_PANCREAS)|G12D(L33_PANCREAS)|G12D(LS180_LARGE_INTESTINE)|G12D(LS513_LARGE_INTESTINE)|G12D(MCAS_OVARY)|G12D(PANC0203_PANCREAS)|G12D(PANC0403_PANCREAS)|G12D(PANC0504_PANCREAS)|G12D(PANC0813_PANCREAS)|G12D(PANC1_PANCREAS)|G12D(PK1_PANCREAS)|G12D(PK59_PANCREAS)|G12D(SKLU1_LUNG)|G12D(SNUC2A_LARGE_INTESTINE)|G12D(SU8686_PANCREAS)|G12D(SUIT2_PANCREAS)|G12D(SW1990_PANCREAS)|G12V(A498_KIDNEY)|G12V(CAPAN2_PANCREAS)|G12V(CFPAC1_PANCREAS)|G12V(COLO668_LUNG)|G12V(CORL23_LUNG)|G12V(DANG_PANCREAS)|G12V(HCC56_LARGE_INTESTINE)|G12V(HUPT4_PANCREAS)|G12V(KP3_PANCREAS)|G12V(LCLC97TM1_LUNG)|G12V(NCIH2444_LUNG)|G12V(NCIH441_LUNG)|G12V(NCIH727_LUNG)|G12V(PANC0327_PANCREAS)|G12V(PATU8902_PANCREAS)|G12V(PATU8988S_PANCREAS)|G12V(QGP1_PANCREAS)|G12V(RCM1_LARGE_INTESTINE)|G12V(RERFLCAD2_LUNG)|G12V(RKN_OVARY)|G12V(SH10TC_STOMACH)|G12V(SHP77_LUNG)|G12V(SNGM_ENDOMETRIUM)|G12V(SW403_LARGE_INTESTINE)|G12V(SW480_LARGE_INTESTINE)|G12V(SW620_LARGE_INTESTINE)|G12V(SW900_LUNG)|G12V(YAPC_PANCREAS)	119	Mis		"""pancreatic, colorectal, lung, thyroid, AML, others"""				Noonan syndrome;Cardiofaciocutaneous syndrome	TSP Lung(1;<1E-08)|Multiple Myeloma(2;<1E-6)			4	19					0	0	1	0	0
CRABP2	1382	broad.mit.edu	37	1	156670419	156670419	+	Missense_Mutation	SNP	A	A	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:156670419A>G	ENST00000368222.3	-	3	435	c.281T>C	c.(280-282)aTg>aCg	p.M94T	CRABP2_ENST00000368221.1_Missense_Mutation_p.M94T	NM_001199723.1|NM_001878.3	NP_001186652.1|NP_001869.1	P29373	RABP2_HUMAN	cellular retinoic acid binding protein 2	94					epidermis development|regulation of transcription, DNA-dependent|signal transduction	cytoplasm|nucleus	retinal binding|retinol binding|transporter activity			endometrium(2)|lung(3)|upper_aerodigestive_tract(1)	6	all_hematologic(923;0.088)|Hepatocellular(266;0.158)				Alitretinoin(DB00523)	CTCACAGACCATTTTATTCTC	0.562000													24	29					0	0	1	0	0
SLC4A2	6522	broad.mit.edu	37	7	150761737	150761737	+	Silent	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr7:150761737G>T	ENST00000485713.1	+	4	1382	c.342G>T	c.(340-342)ccG>ccT	p.P114P	SLC4A2_ENST00000310317.5_Silent_p.P32P|SLC4A2_ENST00000413384.2_Silent_p.P114P|SLC4A2_ENST00000461735.1_Silent_p.P100P|SLC4A2_ENST00000392826.2_Silent_p.P105P	NM_001199692.1	NP_001186621.1	P04920	B3A2_HUMAN	solute carrier family 4 (anion exchanger), member 2	114	Pro-rich.				bicarbonate transport	integral to membrane|membrane fraction	inorganic anion exchanger activity			NS(1)|central_nervous_system(2)|endometrium(3)|kidney(1)|large_intestine(2)|liver(2)|lung(14)|prostate(3)|skin(2)|upper_aerodigestive_tract(2)|urinary_tract(1)	33			OV - Ovarian serous cystadenocarcinoma(82;0.0121)	UCEC - Uterine corpus endometrioid carcinoma (81;0.168)		GAGCCTCCCCGACTGGAGAAA	0.687000													7	27					8.12818e-05	8.69362e-05	1	1	0
DHX16	8449	broad.mit.edu	37	6	30622613	30622613	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr6:30622613C>T	ENST00000376442.3	-	19	3062	c.2867G>A	c.(2866-2868)cGg>cAg	p.R956Q	DHX16_ENST00000376437.5_Missense_Mutation_p.R475Q	NM_001164239.1|NM_003587.4	NP_001157711.1|NP_003578.2	O60231	DHX16_HUMAN	DEAH (Asp-Glu-Ala-His) box polypeptide 16	956					mRNA processing|RNA splicing	nucleus	ATP binding|ATP-dependent helicase activity|nucleic acid binding|RNA helicase activity			kidney(2)|ovary(2)	4						GTAGCCACTCCGAGTCAACCG	0.527000													6	36					0	0	1	0	0
OPA3	80207	broad.mit.edu	37	19	46056875	46056875	+	Missense_Mutation	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:46056875T>A	ENST00000263275.4	-	2	491	c.437A>T	c.(436-438)cAg>cTg	p.Q146L	OPA3_ENST00000544371.1_Missense_Mutation_p.Q93L|OPA3_ENST00000323060.3_Intron	NM_025136.3	NP_079412.1	Q9H6K4	OPA3_HUMAN	optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	146					response to stimulus|visual perception	mitochondrion				cervix(1)|large_intestine(1)|lung(2)	4		Ovarian(192;0.051)|all_neural(266;0.112)		OV - Ovarian serous cystadenocarcinoma(262;0.00778)|GBM - Glioblastoma multiforme(486;0.0976)|Epithelial(262;0.242)		CAGGGCGCCCTGTGGCGGCGC	0.716000													14	33					0	0	1	0	0
LOC647323	647323	broad.mit.edu	37	3	193711759	193711759	+	RNA	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr3:193711759G>A	ENST00000397645.2	-	0	75				RP11-699L21.2_ENST00000426616.1_lincRNA	NR_033944.1																						TGGTCGGCAAGGGAAGGGCTG	0.438000													7	28					0	0	1	0	0
IPO13	9670	broad.mit.edu	37	1	44433011	44433011	+	Missense_Mutation	SNP	A	A	G			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:44433011A>G	ENST00000372343.3	+	19	3300	c.2638A>G	c.(2638-2640)Agc>Ggc	p.S880G	IPO13_ENST00000372339.3_Missense_Mutation_p.S98G	NM_014652.3	NP_055467.3	O94829	IPO13_HUMAN	importin 13	880					protein import into nucleus	cytoplasm|nucleus	protein binding|protein transporter activity			NS(1)|breast(1)|central_nervous_system(1)|cervix(2)|endometrium(6)|kidney(4)|large_intestine(6)|lung(13)|ovary(1)|skin(2)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	40	Acute lymphoblastic leukemia(166;0.155)	Myeloproliferative disorder(586;0.0821)				GGCCTCCCGCAGCCTCATGGA	0.612000													28	79					0	0	1	0	0
TBC1D3P2	440452	broad.mit.edu	37	17	60342186	60342186	+	RNA	SNP	T	T	C	rs79096325		TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr17:60342186T>C	ENST00000581291.1	-	0	1967																				breast(2)|kidney(1)|lung(2)	5						GCTGGGGGTGTTGGGAGGGGC	0.498000													3	31					0	0	1	0	0
WDR90	197335	broad.mit.edu	37	16	705095	705095	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr16:705095C>T	ENST00000549091.1	+	14	1596	c.1504C>T	c.(1504-1506)Cac>Tac	p.H502Y	WDR90_ENST00000293879.4_Missense_Mutation_p.H502Y|LA16c-349E10.1_ENST00000573609.1_RNA	NM_145294.4	NP_660337.3	Q96KV7	WDR90_HUMAN	WD repeat domain 90	502										endometrium(4)|kidney(3)|large_intestine(2)|lung(22)|ovary(2)|prostate(1)|skin(1)|urinary_tract(2)	37		Hepatocellular(780;0.0218)				GGCAAAGGCGCACACTGACTT	0.647000													4	54					0	0	1	0	0
AGAP11	119385	broad.mit.edu	37	10	88761450	88761450	+	RNA	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr10:88761450G>T	ENST00000444431.1	+	0	2580				RP11-96C23.5_ENST00000433214.2_RNA|RP11-96C23.14_ENST00000444180.3_RNA			Q8TF27	AGA11_HUMAN	ankyrin repeat and GTPase domain Arf GTPase activating protein 11						regulation of ARF GTPase activity		ARF GTPase activator activity|zinc ion binding										ATTCCTTGATGGCAGCACAGC	0.388000													22	106					6.44725e-10	7.69915e-10	1	1	0
ZNF548	147694	broad.mit.edu	37	19	57911095	57911095	+	Silent	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:57911095C>T	ENST00000366197.5	+	3	1690	c.1440C>T	c.(1438-1440)agC>agT	p.S480S	AC003002.6_ENST00000600421.1_Intron|ZNF548_ENST00000336128.7_Silent_p.S492S|AC004076.7_ENST00000597410.1_Intron|AC003002.6_ENST00000596400.1_Intron	NM_152909.3	NP_690873.2	Q8NEK5	ZN548_HUMAN	zinc finger protein 548	480					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(1)	1		Colorectal(82;0.000256)|all_neural(62;0.0577)|Ovarian(87;0.221)		UCEC - Uterine corpus endometrioid carcinoma (67;0.168)|GBM - Glioblastoma multiforme(193;0.026)		ATGAGTGCAGCGAATGCCAGA	0.468000													18	61					0	0	1	0	0
STC2	8614	broad.mit.edu	37	5	172752928	172752928	+	Silent	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr5:172752928C>A	ENST00000265087.4	-	2	1546	c.237G>T	c.(235-237)cgG>cgT	p.R79R		NM_003714.2	NP_003705.1	O76061	STC2_HUMAN	stanniocalcin 2	79					cell surface receptor linked signaling pathway|cell-cell signaling	extracellular region	hormone activity			endometrium(2)|haematopoietic_and_lymphoid_tissue(2)|kidney(2)|large_intestine(4)|lung(10)|ovary(1)|prostate(1)|skin(3)	25	Renal(175;0.000159)|Lung NSC(126;0.00229)|all_lung(126;0.004)	Medulloblastoma(196;0.0208)|all_neural(177;0.0416)|Ovarian(839;0.223)	Kidney(164;3.85e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000183)			CATGTAAGCCCCGAATCTCAC	0.463000													67	270					4.17052e-40	5.39972e-40	1	1	0
RGPD4	285190	broad.mit.edu	37	2	108475958	108475958	+	Missense_Mutation	SNP	A	A	G	rs142985549	by1000genomes	TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr2:108475958A>G	ENST00000408999.3	+	11	1659	c.1582A>G	c.(1582-1584)Aga>Gga	p.R528G	RGPD4_ENST00000354986.4_Missense_Mutation_p.R528G	NM_182588.2	NP_872394.2	Q7Z3J3	RGPD4_HUMAN	RANBP2-like and GRIP domain containing 4	528					intracellular transport		binding			breast(1)|endometrium(7)|kidney(4)|lung(23)|pancreas(1)|prostate(1)|skin(3)|urinary_tract(3)	43						TTGTACAGAAAGACAAAAATC	0.393000													11	276					0	0	1	0	0
RPE65	6121	broad.mit.edu	37	1	68903985	68903985	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:68903985T>C	ENST00000262340.5	-	10	1066	c.1013A>G	c.(1012-1014)tAt>tGt	p.Y338C		NM_000329.2	NP_000320.1	Q16518	RPE65_HUMAN	retinal pigment epithelium-specific protein 65kDa	338					visual perception	cytoplasm|plasma membrane	all-trans-retinyl-palmitate hydrolase activity|metal ion binding|retinol isomerase activity			central_nervous_system(1)|kidney(3)|large_intestine(12)|lung(15)|ovary(1)|prostate(2)|upper_aerodigestive_tract(1)	35						TAAGTAATTATAAACAAACTC	0.353000													13	42					0	0	1	0	0
BAGE2	85319	broad.mit.edu	37	21	11058353	11058353	+	RNA	SNP	T	T	C	rs79433933	by1000genomes	TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr21:11058353T>C	ENST00000470054.1	-	0	324									B melanoma antigen family, member 2															Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		GAAATCTCTTTATAAAACCTT	0.343000													6	115					0	0	1	0	0
CCDC74A	90557	broad.mit.edu	37	2	132288372	132288372	+	Silent	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr2:132288372C>T	ENST00000467992.2	+	1	1136	c.822C>T	c.(820-822)ttC>ttT	p.F274F	CCDC74A_ENST00000295171.6_Silent_p.F172F|CCDC74A_ENST00000409856.3_Silent_p.F106F			Q96AQ1	CC74A_HUMAN	coiled-coil domain containing 74A	172										endometrium(4)|large_intestine(3)|lung(9)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)	19						TGTCAAGCTTCCAGTCTGTCA	0.637000													4	20					0	0	1	0	0
SCAMP2	10066	broad.mit.edu	37	15	75143767	75143767	+	Silent	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr15:75143767G>A	ENST00000268099.9	-	5	508	c.399C>T	c.(397-399)ttC>ttT	p.F133F		NM_005697.3	NP_005688.2	O15127	SCAM2_HUMAN	secretory carrier membrane protein 2	133					post-Golgi vesicle-mediated transport|protein transport	integral to membrane|nucleus|recycling endosome membrane|trans-Golgi network membrane	protein binding			kidney(1)|large_intestine(1)|lung(3)|ovary(1)|pancreas(1)|prostate(1)|skin(1)	9						AATCCTGATAGAAGCAGGGCT	0.562000													13	61					0	0	1	0	0
NAB2	4665	broad.mit.edu	37	12	57485446	57485446	+	Missense_Mutation	SNP	T	T	C			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:57485446T>C	ENST00000300131.3	+	2	1000	c.622T>C	c.(622-624)Ttc>Ctc	p.F208L	NAB2_ENST00000342556.6_Missense_Mutation_p.F208L|NAB2_ENST00000357680.4_Missense_Mutation_p.F208L|NAB2_ENST00000554718.1_3'UTR	NM_005967.3	NP_005958.1	Q15742	NAB2_HUMAN	NGFI-A binding protein 2 (EGR1 binding protein 2)	208					cell proliferation|negative regulation of transcription from RNA polymerase III promoter|transcription, DNA-dependent	nucleus	transcription corepressor activity	p.F208L(1)		breast(1)|central_nervous_system(1)|endometrium(1)|kidney(1)|large_intestine(6)|lung(5)|ovary(1)|prostate(2)|stomach(1)|upper_aerodigestive_tract(1)	20						CTCGCCCCCCTTCTCCCCCCC	0.716000													10	33					0	0	1	0	0
FOXI1	2299	broad.mit.edu	37	5	169533054	169533054	+	Nonsense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr5:169533054C>A	ENST00000449804.2	+	1	138	c.93C>A	c.(91-93)taC>taA	p.Y31*	FOXI1_ENST00000306268.6_Nonsense_Mutation_p.Y31*	NM_012188.4|NM_144769.2	NP_036320.2|NP_658982.1	Q12951	FOXI1_HUMAN	forkhead box I1	31	Pro-rich.				epidermal cell fate specification|otic placode formation|pattern specification process|positive regulation of transcription from RNA polymerase II promoter|regulation of sequence-specific DNA binding transcription factor activity	transcription factor complex	DNA bending activity|double-stranded DNA binding|promoter binding|sequence-specific DNA binding|sequence-specific enhancer binding RNA polymerase II transcription factor activity|specific RNA polymerase II transcription factor activity|specific transcriptional repressor activity|transcription activator activity|transcription factor binding|transcription regulatory region DNA binding			breast(3)|central_nervous_system(3)|endometrium(1)|kidney(1)|large_intestine(7)|lung(16)|prostate(1)|skin(2)|upper_aerodigestive_tract(1)	35	Renal(175;0.000159)|Lung NSC(126;0.0267)|all_lung(126;0.04)	Medulloblastoma(196;0.0109)|all_neural(177;0.0298)	Kidney(164;7.53e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000525)			TGAACCTCTACTATGAGAACT	0.687000									Pendred syndrome				4	37					0.150653	0.150653	1	1	0
CYP20A1	57404	broad.mit.edu	37	2	204150408	204150408	+	Missense_Mutation	SNP	A	A	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr2:204150408A>T	ENST00000356079.4	+	9	1047	c.924A>T	c.(922-924)caA>caT	p.Q308H	CYP20A1_ENST00000429815.2_Missense_Mutation_p.Q316H|CYP20A1_ENST00000461371.1_3'UTR	NM_177538.2	NP_803882.1	Q6UW02	CP20A_HUMAN	cytochrome P450, family 20, subfamily A, polypeptide 1	308						integral to membrane	electron carrier activity|heme binding|monooxygenase activity|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen			cervix(1)|large_intestine(2)|lung(6)|ovary(1)|skin(1)	11						AGATAAACCAAGTTTTTGGAA	0.323000													15	56					0	0	1	0	0
SUSD5	26032	broad.mit.edu	37	3	33249307	33249307	+	Silent	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr3:33249307C>T	ENST00000309558.3	-	3	819	c.402G>A	c.(400-402)aaG>aaA	p.K134K		NM_015551.1	NP_056366.1	O60279	SUSD5_HUMAN	sushi domain containing 5	134	Link.				cell adhesion	integral to membrane	hyaluronic acid binding			breast(1)|central_nervous_system(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(5)|lung(4)|ovary(1)|prostate(1)|skin(1)|stomach(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	24						GACCTTCATCCTTAATACAAA	0.463000													14	34					0	0	1	0	0
ZSCAN5B	342933	broad.mit.edu	37	19	56703286	56703286	+	Missense_Mutation	SNP	G	G	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:56703286G>A	ENST00000586855.2	-	3	834	c.521C>T	c.(520-522)cCg>cTg	p.P174L	ZSCAN5B_ENST00000358992.3_Missense_Mutation_p.P174L			A6NJL1	ZSA5B_HUMAN	zinc finger and SCAN domain containing 5B	174					viral reproduction	nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			breast(1)|endometrium(5)|large_intestine(3)|lung(23)|ovary(1)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)	37						GCCTGTCCCCGGATGCATCTG	0.632000													8	29					0	0	1	0	0
SORL1	6653	broad.mit.edu	37	11	121489489	121489489	+	Missense_Mutation	SNP	G	G	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:121489489G>T	ENST00000260197.7	+	42	5740	c.5611G>T	c.(5611-5613)Ggt>Tgt	p.G1871C	SORL1_ENST00000527934.1_Missense_Mutation_p.G486C|SORL1_ENST00000525532.1_Missense_Mutation_p.G815C|SORL1_ENST00000532694.1_Missense_Mutation_p.G717C|SORL1_ENST00000534286.1_Missense_Mutation_p.G781C	NM_003105.5	NP_003096.1	Q92673	SORL_HUMAN	sortilin-related receptor, L(DLR class) A repeats containing	1871	Fibronectin type-III 4.				cholesterol metabolic process|lipid transport|receptor-mediated endocytosis	integral to plasma membrane|low-density lipoprotein particle	low-density lipoprotein particle binding|transmembrane receptor activity			NS(1)|breast(5)|central_nervous_system(1)|cervix(1)|endometrium(7)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(14)|liver(2)|lung(34)|ovary(5)|pancreas(1)|skin(12)|stomach(2)|upper_aerodigestive_tract(2)	91		Breast(109;0.00119)|Medulloblastoma(222;0.0429)|all_neural(223;0.113)		BRCA - Breast invasive adenocarcinoma(274;3.34e-05)|OV - Ovarian serous cystadenocarcinoma(223;0.108)		CCAGGTTTATGGTATTTTCTA	0.453000													19	133					6.94344e-10	8.21196e-10	1	1	0
SLIT3	6586	broad.mit.edu	37	5	168093531	168093531	+	Silent	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr5:168093531C>T	ENST00000519560.1	-	36	4919	c.4500G>A	c.(4498-4500)caG>caA	p.Q1500Q	SLIT3_ENST00000332966.8_Silent_p.Q1507Q|CTC-558O2.2_ENST00000520041.1_RNA	NM_001271946.1|NM_003062.2	NP_001258875.1|NP_003053.1	O75094	SLIT3_HUMAN	slit homolog 3 (Drosophila)	1500	CTCK.				apoptosis involved in luteolysis|axon extension involved in axon guidance|cellular response to hormone stimulus|negative chemotaxis|negative regulation of cell growth|negative regulation of chemokine-mediated signaling pathway|response to cortisol stimulus|Roundabout signaling pathway	extracellular space|mitochondrion	calcium ion binding|Roundabout binding			endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(7)|large_intestine(15)|liver(2)|lung(48)|ovary(4)|prostate(7)|skin(6)|upper_aerodigestive_tract(3)|urinary_tract(1)	100	Renal(175;0.000159)|Lung NSC(126;0.0174)|all_lung(126;0.0392)	Medulloblastoma(196;0.0399)|all_neural(177;0.0966)	Kidney(164;7.53e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000525)			CGTCCGTGCACTGGAAGACGT	0.642000													9	19					0	0	1	0	0
ZEB1	6935	broad.mit.edu	37	10	31809318	31809318	+	Missense_Mutation	SNP	A	A	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr10:31809318A>T	ENST00000446923.2	+	7	1398	c.1007A>T	c.(1006-1008)gAt>gTt	p.D336V	ZEB1_ENST00000361642.5_Missense_Mutation_p.D353V|ZEB1_ENST00000320985.10_Missense_Mutation_p.D352V|ZEB1_ENST00000559858.1_3'UTR|ZEB1_ENST00000542815.3_Missense_Mutation_p.D285V|ZEB1_ENST00000560721.2_Missense_Mutation_p.D332V	NM_001128128.2|NM_001174094.1	NP_001121600.1|NP_001167565.1	P37275	ZEB1_HUMAN	zinc finger E-box binding homeobox 1	352					cell proliferation|immune response|negative regulation of transcription from RNA polymerase II promoter|positive regulation of neuron differentiation	cytoplasm	E-box binding|sequence-specific DNA binding transcription factor activity|transcription coactivator activity|transcription corepressor activity|zinc ion binding			NS(2)|breast(4)|central_nervous_system(2)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(14)|lung(38)|ovary(3)|skin(6)|upper_aerodigestive_tract(4)	77		Prostate(175;0.0156)				GAACCTGTGGATTATGAATTC	0.433000													15	44					0	0	1	0	0
BCL9L	283149	broad.mit.edu	37	11	118773437	118773437	+	Missense_Mutation	SNP	C	C	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:118773437C>A	ENST00000334801.3	-	6	1979	c.1015G>T	c.(1015-1017)Gtg>Ttg	p.V339L	BCL9L_ENST00000526143.1_5'UTR	NM_182557.2	NP_872363.1	Q86UU0	BCL9L_HUMAN	B-cell CLL/lymphoma 9-like	339	Necessary for interaction with CTNNB1 (By similarity).|Pro-rich.				negative regulation of transforming growth factor beta receptor signaling pathway|positive regulation of epithelial to mesenchymal transition|positive regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent		transcription coactivator activity			NS(3)|breast(3)|central_nervous_system(1)|cervix(1)|endometrium(4)|kidney(2)|large_intestine(13)|lung(20)|ovary(3)|pancreas(1)|prostate(1)|skin(2)|urinary_tract(2)	56	all_hematologic(175;0.0839)	Medulloblastoma(222;0.0425)|all_hematologic(192;0.103)|all_neural(223;0.112)		BRCA - Breast invasive adenocarcinoma(274;7.66e-05)		GCAGCTCCCACCGAGTTGGGG	0.721000													4	11					2.56e-06	2.78655e-06	1	1	0
GRIN2A	2903	broad.mit.edu	37	16	9923320	9923320	+	Missense_Mutation	SNP	T	T	A			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr16:9923320T>A	ENST00000396573.2	-	10	2276	c.1967A>T	c.(1966-1968)gAg>gTg	p.E656V	GRIN2A_ENST00000404927.2_Missense_Mutation_p.E656V|GRIN2A_ENST00000330684.3_Missense_Mutation_p.E656V|GRIN2A_ENST00000535259.1_Missense_Mutation_p.E499V|GRIN2A_ENST00000396575.2_Missense_Mutation_p.E656V|GRIN2A_ENST00000562109.1_Missense_Mutation_p.E656V	NM_000833.3	NP_000824.1	Q12879	NMDE1_HUMAN	glutamate receptor, ionotropic, N-methyl D-aspartate 2A	656					response to ethanol	cell junction|N-methyl-D-aspartate selective glutamate receptor complex|outer membrane-bounded periplasmic space|postsynaptic membrane	N-methyl-D-aspartate selective glutamate receptor activity|zinc ion binding			NS(7)|breast(5)|cervix(1)|endometrium(11)|kidney(6)|large_intestine(36)|lung(71)|ovary(4)|prostate(9)|skin(45)|upper_aerodigestive_tract(2)|urinary_tract(1)	198					Felbamate(DB00949)|Glycine(DB00145)|L-Glutamic Acid(DB00142)|Loperamide(DB00836)|Memantine(DB01043)	CACAAATTCCTCTTGGATCAT	0.498000													17	53					0	0	1	0	0
ZNF808	388558	broad.mit.edu	37	19	53058613	53058613	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:53058613C>T	ENST00000359798.4	+	5	2624	c.2444C>T	c.(2443-2445)gCa>gTa	p.A815V		NM_001039886.3	NP_001034975.2	Q8N4W9	ZN808_HUMAN	zinc finger protein 808	815					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			endometrium(8)|kidney(3)|lung(12)|urinary_tract(1)	24				OV - Ovarian serous cystadenocarcinoma(262;0.00501)|GBM - Glioblastoma multiforme(134;0.0213)		ATTCACACTGCAGAGAAACCT	0.378000													51	176					0	0	1	0	0
COL22A1	169044	broad.mit.edu	37	8	139890122	139890122	+	Missense_Mutation	SNP	C	C	T			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr8:139890122C>T	ENST00000303045.6	-	3	975	c.529G>A	c.(529-531)Gtg>Atg	p.V177M	COL22A1_ENST00000435777.1_Missense_Mutation_p.V177M	NM_152888.1	NP_690848.1	Q8NFW1	COMA1_HUMAN	collagen, type XXII, alpha 1	177	VWFA.				cell adhesion	collagen|cytoplasm	structural molecule activity			breast(1)|endometrium(10)|haematopoietic_and_lymphoid_tissue(2)|kidney(14)|large_intestine(29)|lung(107)|ovary(13)|pancreas(1)|prostate(3)|skin(12)|upper_aerodigestive_tract(15)|urinary_tract(4)	211	all_epithelial(106;1.55e-12)|Lung NSC(106;1.67e-05)|all_lung(105;3.39e-05)|Ovarian(258;0.00672)|Acute lymphoblastic leukemia(118;0.155)		BRCA - Breast invasive adenocarcinoma(115;0.0517)			GCCTCGCCCACGCCCACGGCA	0.677000										HNSCC(7;0.00092)			8	19					0	0	1	0	0
THRAP3	9967	broad.mit.edu	37	1	36762337	36762338	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr1:36762337_36762338delAC	ENST00000354618.5	+	9	2493_2494	c.2269_2270delAC	c.(2269-2271)afs	p.T757fs	THRAP3_ENST00000469141.2_Frame_Shift_Del_p.T757fs	NM_005119.3	NP_005110.2	Q9Y2W1	TR150_HUMAN	thyroid hormone receptor associated protein 3	757					androgen receptor signaling pathway|positive regulation of transcription from RNA polymerase II promoter|transcription initiation from RNA polymerase II promoter	mediator complex	ATP binding|ligand-dependent nuclear receptor transcription coactivator activity|receptor activity|RNA polymerase II transcription cofactor activity|thyroid hormone receptor binding|vitamin D receptor binding			breast(1)|cervix(1)|endometrium(5)|kidney(3)|large_intestine(9)|lung(12)|ovary(5)|stomach(1)	37		Myeloproliferative disorder(586;0.0255)|all_neural(195;0.164)				AGCTGAAAAAACAGAGAAAACT	0.426			T	USP6	aneurysmal bone cysts								16	78	---	---	---	---					
LOC101927533	101927533	broad.mit.edu	37	2	65738863	65738863	+	RNA	DEL	G	G	-			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr2:65738863delG	ENST00000377977.3	+	0	862																											TTTTTTTTTTGTCCAGGAGGC	0.303													3	5	---	---	---	---					
PMS2P4	5382	broad.mit.edu	37	7	66762432	66762432	+	RNA	DEL	G	G	-	rs60169909		TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr7:66762432delG	ENST00000414507.1	-	0	184																											gtctcaaaaagaaaaaaaaaa	0.408													4	9	---	---	---	---					
RP11-718B12.2	0	broad.mit.edu	37	11	82517019	82517024	+	RNA	DEL	ATGTGT	ATGTGT	-	rs147875274	by1000genomes	TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr11:82517019_82517024delATGTGT	ENST00000526305.1	+	0	63																											CCAAGAGATGATGTGTATTCTACTAA	0.447													21	60	---	---	---	---					
EMG1	10436	broad.mit.edu	37	12	7080210	7080211	+	RNA	INS	-	-	G	rs141646579	by1000genomes	TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr12:7080210_7080211insG	ENST00000546220.1	+	0	155_156				U47924.28_ENST00000261406.6_lincRNA|U47924.19_ENST00000564245.1_RNA			Q92979	NEP1_HUMAN	EMG1 N1-specific pseudouridine methyltransferase						ribosomal small subunit biogenesis	cytoplasm|nucleolus	rRNA (pseudouridine) methyltransferase activity|rRNA binding										CGGAGGCCGTAGTTTATTGTGG	0.569													5	10	---	---	---	---					
DHX34	9704	broad.mit.edu	37	19	47856518	47856519	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:47856518_47856519delGA	ENST00000328771.4	+	2	580_581	c.231_232delGA	c.(229-234)agagfs	p.RK77fs		NM_014681.5	NP_055496.2	Q14147	DHX34_HUMAN	DEAH (Asp-Glu-Ala-His) box polypeptide 34	77						intracellular	ATP binding|ATP-dependent helicase activity|RNA binding|zinc ion binding			breast(1)|central_nervous_system(1)|cervix(1)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(2)|lung(8)|ovary(5)|prostate(5)|skin(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	36		all_cancers(25;1.65e-09)|all_epithelial(76;9.95e-08)|all_lung(116;7.27e-07)|Lung NSC(112;1.6e-06)|Ovarian(192;0.0139)|all_neural(266;0.026)|Breast(70;0.0503)		all cancers(93;7.16e-05)|OV - Ovarian serous cystadenocarcinoma(262;0.000489)|GBM - Glioblastoma multiforme(486;0.00413)|Epithelial(262;0.0132)		AGACCTCCAGGAAGGAGGAGAA	0.535													23	109	---	---	---	---					
KLK13	26085	broad.mit.edu	37	19	51563836	51563836	+	Frame_Shift_Del	DEL	C	C	-			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr19:51563836delC	ENST00000595793.1	-	2	135	c.93delG	c.(91-93)ggfs	p.G31fs	KLK13_ENST00000596955.1_Frame_Shift_Del_p.G31fs|KLK13_ENST00000335422.3_Intron|KLK13_ENST00000595547.1_Frame_Shift_Del_p.G31fs	NM_015596.1	NP_056411.1	Q9UKR3	KLK13_HUMAN	kallikrein-related peptidase 13	31					proteolysis		protein binding|serine-type endopeptidase activity			central_nervous_system(1)|endometrium(1)|kidney(2)|large_intestine(4)|lung(6)|prostate(1)|skin(1)	16		all_neural(266;0.026)		OV - Ovarian serous cystadenocarcinoma(262;0.00224)|GBM - Glioblastoma multiforme(134;0.00432)		ACCCACTGGTCCCATTGGTGT	0.587													17	96	---	---	---	---					
CD93	22918	broad.mit.edu	37	20	23066789	23066791	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr20:23066789_23066791delAGC	ENST00000246006.4	-	1	186_188	c.39_41delGCT	c.(37-42)ctc>ct	p.LL13del		NM_012072.3	NP_036204.2	Q9NPY3	C1QR1_HUMAN	CD93 molecule	13					cell-cell adhesion|interspecies interaction between organisms|macrophage activation|phagocytosis	plasma membrane	calcium ion binding|complement component C1q binding|receptor activity|sugar binding			NS(2)|central_nervous_system(1)|endometrium(1)|kidney(2)|large_intestine(10)|lung(14)|pancreas(1)|prostate(2)|skin(3)|upper_aerodigestive_tract(2)|urinary_tract(1)	39	Colorectal(13;0.0352)|Lung NSC(19;0.0542)|all_lung(19;0.118)					CTGGGTcaggagcagcagcagca	0.709													2	4	---	---	---	---					
ANKRD20A11P	391267	broad.mit.edu	37	21	15347257	15347258	+	RNA	INS	-	-	A	rs80199214		TCGA-69-8254-01A-11D-2284-08	TCGA-69-8254-10A-01D-2284-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c5cc36f5-d3cd-4a7c-8f1d-e41e10ed9015	5f2e9acb-855e-40ea-9552-7d9f1389e429	g.chr21:15347257_15347258insA	ENST00000344693.5	-	0	736					NR_027270.1																						ACCCTGCACAGAAAAAAAGTTG	0.307													4	7	---	---	---	---					
