Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
PLXDC2	84898	hgsc.bcm.edu	36	10	20608641	20608641	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ARHGAP21	57584	hgsc.bcm.edu	36	10	24949800	24949800	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PHYHIPL	84457	hgsc.bcm.edu	36	10	60674861	60674861	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PTEN	5728	hgsc.bcm.edu	36	10	89675261	89675261	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CH25H	9023	hgsc.bcm.edu	36	10	90956619	90956619	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
AGL	178	hgsc.bcm.edu	36	1	100115827	100115827	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CASP5	838	hgsc.bcm.edu	36	11	104374842	104374842	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ATM	472	hgsc.bcm.edu	36	11	107675689	107675689	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ATM	472	hgsc.bcm.edu	36	11	107691967	107691967	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KCNA2	3737	hgsc.bcm.edu	36	1	110947820	110947820	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
UPK2	7379	hgsc.bcm.edu	36	11	118332341	118332341	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NTM	50863	hgsc.bcm.edu	36	11	131521545	131521545	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLC16A1	6566	hgsc.bcm.edu	36	1	113261568	113261568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LMO2	4005	hgsc.bcm.edu	36	11	33837657	33837657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PLEKHO1	51177	hgsc.bcm.edu	36	1	148398096	148398096	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LCE3A	353142	hgsc.bcm.edu	36	1	150862071	150862071	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SPRR3	6707	hgsc.bcm.edu	36	1	151242167	151242167	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LELP1	149018	hgsc.bcm.edu	36	1	151443963	151443963	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NES	10763	hgsc.bcm.edu	36	1	154906932	154906932	+	Silent	SNP	C	C	T	rs3748571	byCluster;byFrequency	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
OR5D16	390144	hgsc.bcm.edu	36	11	55363217	55363217	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SPTA1	6708	hgsc.bcm.edu	36	1	156849320	156849320	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SMPD1	6609	hgsc.bcm.edu	36	11	6368511	6368511	+	Missense_Mutation	SNP	T	T	C	rs1050228	byCluster;byFrequency	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLC25A45	283130	hgsc.bcm.edu	36	11	64903958	64903958	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CPT1A	1374	hgsc.bcm.edu	36	11	68323332	68323332	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PADI1	29943	hgsc.bcm.edu	36	1	17427794	17427794	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
USP35	57558	hgsc.bcm.edu	36	11	77598503	77598503	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLC36A4	120103	hgsc.bcm.edu	36	11	92535639	92535639	+	Silent	SNP	C	C	T	rs34525400	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
AKR7A2	8574	hgsc.bcm.edu	36	1	19506118	19506118	+	Silent	SNP	G	G	A	rs2231202	byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
C12orf52	84934	hgsc.bcm.edu	36	12	112113928	112113928	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
WDR66	144406	hgsc.bcm.edu	36	12	120843775	120843775	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DCP1B	196513	hgsc.bcm.edu	36	12	1932614	1932614	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KRAS	3845	hgsc.bcm.edu	36	12	25269914	25269914	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ACTN2	88	hgsc.bcm.edu	36	1	234990947	234990947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
RYR2	6262	hgsc.bcm.edu	36	1	235733295	235733295	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
WDR64	128025	hgsc.bcm.edu	36	1	239953239	239953239	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KRT4	3851	hgsc.bcm.edu	36	12	51493870	51493870	+	Silent	SNP	A	A	G	rs7135148	by2Hit2Allele;byCluster;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KRT4	3851	hgsc.bcm.edu	36	12	51493873	51493873	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PAFAH2	5051	hgsc.bcm.edu	36	1	26175816	26175816	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NALCN	259232	hgsc.bcm.edu	36	13	100515773	100515773	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SPOCD1	90853	hgsc.bcm.edu	36	1	32034875	32034875	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PARP4	143	hgsc.bcm.edu	36	13	23950321	23950321	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MTIF3	219402	hgsc.bcm.edu	36	13	26907776	26907776	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ELF1	84337	hgsc.bcm.edu	36	13	40413327	40413327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
C1orf94	84970	hgsc.bcm.edu	36	1	34439114	34439114	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ALG11	440138	hgsc.bcm.edu	36	13	51484598	51484598	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CLSPN	63967	hgsc.bcm.edu	36	1	35986189	35986189	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COMMD6	170622	hgsc.bcm.edu	36	13	75009933	75009933	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MACF1	23499	hgsc.bcm.edu	36	1	39685773	39685773	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
HPCAL4	51440	hgsc.bcm.edu	36	1	39922229	39922229	+	Silent	SNP	G	G	T	rs784634	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
RTL1	388015	hgsc.bcm.edu	36	14	100420225	100420225	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLFNL1	200172	hgsc.bcm.edu	36	1	41254432	41254432	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DLGAP5	9787	hgsc.bcm.edu	36	14	54705932	54705932	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
C14orf50	145376	hgsc.bcm.edu	36	14	64124712	64124712	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SRSF5	0	hgsc.bcm.edu	36	14	69304676	69304676	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MGA	23269	hgsc.bcm.edu	36	15	39829067	39829067	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NARG2	79664	hgsc.bcm.edu	36	15	58507944	58507944	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
IGDCC3	9543	hgsc.bcm.edu	36	15	63410976	63410976	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NR2E3	10002	hgsc.bcm.edu	36	15	69892983	69892983	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CRABP1	1381	hgsc.bcm.edu	36	15	76427332	76427332	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TMED3	23423	hgsc.bcm.edu	36	15	77401451	77401451	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MEF2A	4205	hgsc.bcm.edu	36	15	98070261	98070261	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CLEC16A	23274	hgsc.bcm.edu	36	16	11122100	11122100	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COG7	91949	hgsc.bcm.edu	36	16	23343576	23343576	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ITGAL	3683	hgsc.bcm.edu	36	16	30415014	30415014	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
BCKDK	10295	hgsc.bcm.edu	36	16	31029294	31029294	+	Silent	SNP	G	G	A	rs14235	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MMP2	4313	hgsc.bcm.edu	36	16	54096802	54096802	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CES5A	0	hgsc.bcm.edu	36	16	54447818	54447818	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DPEP2	64174	hgsc.bcm.edu	36	16	66579279	66579279	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
HYDIN	54768	hgsc.bcm.edu	36	16	69399411	69399411	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KIAA0174	9798	hgsc.bcm.edu	36	16	70514018	70514018	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ADAMTS18	170692	hgsc.bcm.edu	36	16	75891731	75891731	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CDH13	1012	hgsc.bcm.edu	36	16	82269407	82269407	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
INPP5K	51763	hgsc.bcm.edu	36	17	1363557	1363557	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LLGL1	3996	hgsc.bcm.edu	36	17	18077866	18077866	+	Missense_Mutation	SNP	A	A	G	rs2290505	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KCNJ12	3768	hgsc.bcm.edu	36	17	21260360	21260360	+	Silent	SNP	C	C	T	rs1612176	by2Hit2Allele;byCluster;byFrequency	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KLHL11	55175	hgsc.bcm.edu	36	17	37264670	37264670	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MYST2	11143	hgsc.bcm.edu	36	17	45224353	45224353	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MED13	9969	hgsc.bcm.edu	36	17	57415089	57415089	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PRKCA	5578	hgsc.bcm.edu	36	17	62230493	62230493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SDK2	54549	hgsc.bcm.edu	36	17	68894253	68894253	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ITGB4	3691	hgsc.bcm.edu	36	17	71258723	71258723	+	Silent	SNP	G	G	A	rs61735289	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TP53	7157	hgsc.bcm.edu	36	17	7517805	7517805	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TP53	7157	hgsc.bcm.edu	36	17	7517878	7517878	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TP53	7157	hgsc.bcm.edu	36	17	7518296	7518296	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TP53	7157	hgsc.bcm.edu	36	17	7518299	7518299	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
AK5	26289	hgsc.bcm.edu	36	1	77525380	77525380	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COL24A1	255631	hgsc.bcm.edu	36	1	86024691	86024691	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ATP9B	374868	hgsc.bcm.edu	36	18	75164642	75164642	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MRPL4	51073	hgsc.bcm.edu	36	19	10224280	10224280	+	Missense_Mutation	SNP	C	C	T	rs45520838	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FDX1L	112812	hgsc.bcm.edu	36	19	10282229	10282229	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ACP5	54	hgsc.bcm.edu	36	19	11548604	11548604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MOBKL2A	126308	hgsc.bcm.edu	36	19	2029488	2029488	+	Silent	SNP	T	T	C	rs2074894	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ZNF43	7594	hgsc.bcm.edu	36	19	21783947	21783947	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ZNF43	7594	hgsc.bcm.edu	36	19	21783948	21783948	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FCGBP	8857	hgsc.bcm.edu	36	19	45111927	45111927	+	Silent	SNP	G	G	A	rs12460562	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CYP2S1	29785	hgsc.bcm.edu	36	19	46401222	46401222	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
HAS1	3036	hgsc.bcm.edu	36	19	56909150	56909150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ZNF329	79673	hgsc.bcm.edu	36	19	63331165	63331165	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CST9	128822	hgsc.bcm.edu	36	20	23534266	23534266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TP53INP2	58476	hgsc.bcm.edu	36	20	32760317	32760317	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PHF20	51230	hgsc.bcm.edu	36	20	33923076	33923076	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
HNF4A	3172	hgsc.bcm.edu	36	20	42468143	42468143	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GCFC1	0	hgsc.bcm.edu	36	21	33042874	33042874	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CBS	875	hgsc.bcm.edu	36	21	43352042	43352042	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KRTAP10-10	353333	hgsc.bcm.edu	36	21	44882021	44882021	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COL6A1	1291	hgsc.bcm.edu	36	21	46242767	46242767	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SCN7A	6332	hgsc.bcm.edu	36	2	167039070	167039070	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
XIRP2	129446	hgsc.bcm.edu	36	2	167468552	167468552	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TTN	7273	hgsc.bcm.edu	36	2	179180227	179180227	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ANKRD44	91526	hgsc.bcm.edu	36	2	197698381	197698381	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CLK1	78989	hgsc.bcm.edu	36	2	201437134	201437134	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NRP2	8828	hgsc.bcm.edu	36	2	206316395	206316395	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NEFH	4744	hgsc.bcm.edu	36	22	28215564	28215564	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215567	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COL6A3	1293	hgsc.bcm.edu	36	2	237917887	237917887	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PRR21	643905	hgsc.bcm.edu	36	2	240630137	240630137	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SMEK2	57223	hgsc.bcm.edu	36	2	55684627	55684627	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
AAK1	22848	hgsc.bcm.edu	36	2	69595260	69595260	+	Silent	SNP	T	T	C	rs55712143	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TCF7L1	83439	hgsc.bcm.edu	36	2	85383213	85383213	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COL6A5	256076	hgsc.bcm.edu	36	3	131578025	131578025	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
COL6A6	131873	hgsc.bcm.edu	36	3	131801318	131801318	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LRRC15	131578	hgsc.bcm.edu	36	3	195562311	195562311	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLC22A13	9390	hgsc.bcm.edu	36	3	38282451	38282451	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DNAH1	25981	hgsc.bcm.edu	36	3	52405566	52405566	+	Missense_Mutation	SNP	G	G	A	rs12163565	byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CHDH	55349	hgsc.bcm.edu	36	3	53829574	53829574	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ANK2	287	hgsc.bcm.edu	36	4	114339674	114339674	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FBXW7	55294	hgsc.bcm.edu	36	4	153466739	153466739	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GUCY1A3	2982	hgsc.bcm.edu	36	4	156853904	156853904	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NEK1	4750	hgsc.bcm.edu	36	4	170582345	170582345	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ODZ3	55714	hgsc.bcm.edu	36	4	183831196	183831196	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ODZ3	55714	hgsc.bcm.edu	36	4	183933120	183933120	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLIT2	9353	hgsc.bcm.edu	36	4	20121232	20121232	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GABRA4	2557	hgsc.bcm.edu	36	4	46625118	46625118	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DSPP	1834	hgsc.bcm.edu	36	4	88755043	88755043	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DSPP	1834	hgsc.bcm.edu	36	4	88756381	88756381	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MEPE	56955	hgsc.bcm.edu	36	4	88985415	88985415	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203309	112203309	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203373	112203373	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203374	112203374	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203581	112203581	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203629	112203629	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203843	112203843	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SLC4A9	83697	hgsc.bcm.edu	36	5	139727534	139727534	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PCYOX1L	78991	hgsc.bcm.edu	36	5	148723835	148723835	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PPARGC1B	133522	hgsc.bcm.edu	36	5	149196816	149196816	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CCNJL	79616	hgsc.bcm.edu	36	5	159613128	159613128	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GABRA1	2554	hgsc.bcm.edu	36	5	161232726	161232726	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LCP2	3937	hgsc.bcm.edu	36	5	169630436	169630436	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FGFR4	2264	hgsc.bcm.edu	36	5	176452849	176452849	+	Missense_Mutation	SNP	G	G	A	rs351855	byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
UGT3A2	167127	hgsc.bcm.edu	36	5	36084927	36084927	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GZMA	3001	hgsc.bcm.edu	36	5	54439909	54439909	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PDE4D	5144	hgsc.bcm.edu	36	5	58306406	58306406	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LRRC70	100130733	hgsc.bcm.edu	36	5	61912202	61912202	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CMYA5	202333	hgsc.bcm.edu	36	5	79067233	79067233	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PCSK1	5122	hgsc.bcm.edu	36	5	95754763	95754763	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PREP	5550	hgsc.bcm.edu	36	6	105843440	105843440	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MCM9	254394	hgsc.bcm.edu	36	6	119294488	119294488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
C6orf170	221322	hgsc.bcm.edu	36	6	121667257	121667257	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PDE7B	27115	hgsc.bcm.edu	36	6	136471640	136471640	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MYLIP	29116	hgsc.bcm.edu	36	6	16253452	16253452	+	Silent	SNP	C	C	T	rs1060901	byCluster;byFrequency	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
HLA-A	3105	hgsc.bcm.edu	36	6	30018738	30018738	+	Missense_Mutation	SNP	T	T	A	rs1071742	byCluster;byFrequency	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MUC21	394263	hgsc.bcm.edu	36	6	31062470	31062470	+	Missense_Mutation	SNP	C	C	T	rs34126344	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LY6G6D	259215	hgsc.bcm.edu	36	6	31793432	31793432	+	Missense_Mutation	SNP	G	G	T	rs60559550	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
LY6G6D	259215	hgsc.bcm.edu	36	6	31793434	31793434	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MAPK13	5603	hgsc.bcm.edu	36	6	36214470	36214470	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GLP1R	2740	hgsc.bcm.edu	36	6	39142004	39142004	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
POLH	10721	hgsc.bcm.edu	36	6	43658078	43658078	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FARS2	10667	hgsc.bcm.edu	36	6	5716572	5716572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TMEM168	64418	hgsc.bcm.edu	36	7	112211378	112211378	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MKLN1	4289	hgsc.bcm.edu	36	7	130806183	130806183	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
BRAF	673	hgsc.bcm.edu	36	7	140099639	140099639	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
GIMAP1-GIMAP5	0	hgsc.bcm.edu	36	7	150070324	150070324	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MEOX2	4223	hgsc.bcm.edu	36	7	15692322	15692322	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SNX13	23161	hgsc.bcm.edu	36	7	17821090	17821090	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SP4	6671	hgsc.bcm.edu	36	7	21436595	21436595	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DNAH11	8701	hgsc.bcm.edu	36	7	21704295	21704295	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DDC	1644	hgsc.bcm.edu	36	7	50573064	50573064	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TNRC18	84629	hgsc.bcm.edu	36	7	5330454	5330454	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
C7orf26	79034	hgsc.bcm.edu	36	7	6600631	6600631	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ZNF853	54753	hgsc.bcm.edu	36	7	6623355	6623355	+	Missense_Mutation	SNP	G	G	A	rs2243563	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
POM121	22932	hgsc.bcm.edu	36	7	72051379	72051379	+	Missense_Mutation	SNP	G	G	A	rs62463429	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TMEM130	222865	hgsc.bcm.edu	36	7	98298852	98298852	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KPNA7	402569	hgsc.bcm.edu	36	7	98613479	98613479	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DLC1	10395	hgsc.bcm.edu	36	8	13401241	13401241	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CLVS1	0	hgsc.bcm.edu	36	8	62375167	62375167	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TRPA1	8989	hgsc.bcm.edu	36	8	73097890	73097890	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CYLC2	1539	hgsc.bcm.edu	36	9	104807235	104807235	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MPDZ	84708	hgsc.bcm.edu	36	9	13182158	13182158	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SURF6	6838	hgsc.bcm.edu	36	9	135189287	135189287	+	Missense_Mutation	SNP	G	G	A	rs886089	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SNAPC3	6619	hgsc.bcm.edu	36	9	15412893	15412893	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
C9orf93	203238	hgsc.bcm.edu	36	9	15838930	15838930	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
CDKN2A	1029	hgsc.bcm.edu	36	9	21964593	21964593	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
HSD17B3	3293	hgsc.bcm.edu	36	9	98104198	98104198	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ALG13	79868	hgsc.bcm.edu	36	X	110874655	110874655	+	Silent	SNP	T	T	A	rs13440710	by2Hit2Allele	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
AMELX	265	hgsc.bcm.edu	36	X	11226899	11226899	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
NKRF	55922	hgsc.bcm.edu	36	X	118608883	118608883	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
BGN	633	hgsc.bcm.edu	36	X	152424703	152424703	+	Silent	SNP	C	C	T	rs1126499	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
RS1	6248	hgsc.bcm.edu	36	X	18584736	18584736	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
EIF2S3	1968	hgsc.bcm.edu	36	X	23992329	23992329	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FAM47B	170062	hgsc.bcm.edu	36	X	34871503	34871503	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
FAM47C	442444	hgsc.bcm.edu	36	X	36938696	36938696	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ZNF669	79862	hgsc.bcm.edu	36	1	245330716	245330717	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
MGAT4A	11320	hgsc.bcm.edu	36	2	98709169	98709169	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SPATA3	130560	hgsc.bcm.edu	36	2	231569277	231569303	+	In_Frame_Del	DEL	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112202265	112202265	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
APC	324	hgsc.bcm.edu	36	5	112203374	112203375	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
PCDH12	51294	hgsc.bcm.edu	36	5	141315807	141315808	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SH2D4A	63898	hgsc.bcm.edu	36	8	19234743	19234748	+	Frame_Shift_Del	DEL	CAGAGA	CAGAGA	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	CAGAGA	CAGAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
DNA2	1763	hgsc.bcm.edu	36	10	69852527	69852527	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
KRT3	3850	hgsc.bcm.edu	36	12	51471266	51471267	+	Frame_Shift_Ins	INS	-	-	CGCC	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TRPV1	7442	hgsc.bcm.edu	36	17	3423919	3423920	+	Frame_Shift_Ins	INS	-	-	G	rs56355372	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
SMAD4	4089	hgsc.bcm.edu	36	18	46845809	46845810	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
ZNF83	55769	hgsc.bcm.edu	36	19	57808746	57808829	+	In_Frame_Del	DEL	CCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT	CCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	CCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT	CCACACTCATTACATTTGTAAGGTTTCTCTCCAGTGTGGATTCTCTGATGTTGTGCAAGGTGTGAAATATGATGGAAGACCTTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
TOX2	84969	hgsc.bcm.edu	36	20	42127972	42127973	+	In_Frame_Ins	INS	-	-	CCG	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
URB1	9875	hgsc.bcm.edu	36	21	32666767	32666780	+	Frame_Shift_Del	DEL	AACAAGCTCCCGCA	AACAAGCTCCCGCA	-	novel	unknown	TCGA-AG-3885-01A-01W-0899-10	TCGA-AG-3885-10A-01W-0901-10	AACAAGCTCCCGCA	AACAAGCTCCCGCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7a748a19-12e6-43b6-8389-97945d7be392	466f3612-0dc1-4e8e-a7e8-0f18e6f74b94
