Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
DNAH11	8701	hgsc.bcm.edu	36	7	21744974	21744974	+	Missense_Mutation	SNP	C	C	T	rs1109806	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NPSR1	387129	hgsc.bcm.edu	36	7	34664582	34664582	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
INHBA	3624	hgsc.bcm.edu	36	7	41696508	41696508	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AUTS2	282553	hgsc.bcm.edu	36	7	69221126	69221126	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AUTS2	282553	hgsc.bcm.edu	36	7	69870950	69870950	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
HIP1	3092	hgsc.bcm.edu	36	7	75016198	75016198	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DTX2	113878	hgsc.bcm.edu	36	7	75949771	75949771	+	Silent	SNP	G	G	A	rs4236506	by2Hit2Allele;byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SEMA3D	223117	hgsc.bcm.edu	36	7	84466925	84466925	+	Missense_Mutation	SNP	T	T	G	rs7800072	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SEMA3D	223117	hgsc.bcm.edu	36	7	84523008	84523008	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GRM3	2913	hgsc.bcm.edu	36	7	86253748	86253748	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CALCR	799	hgsc.bcm.edu	36	7	92946673	92946673	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DLX5	1749	hgsc.bcm.edu	36	7	96491752	96491752	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZAN	7455	hgsc.bcm.edu	36	7	100204256	100204256	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MUC17	140453	hgsc.bcm.edu	36	7	100466622	100466622	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
TRIM56	81844	hgsc.bcm.edu	36	7	100518549	100518549	+	Silent	SNP	T	T	C	rs6948536	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RELN	5649	hgsc.bcm.edu	36	7	103001847	103001847	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
IFRD1	3475	hgsc.bcm.edu	36	7	111900135	111900135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLC13A4	26266	hgsc.bcm.edu	36	7	135056716	135056716	+	Silent	SNP	A	A	G	rs4596594	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
BRAF	673	hgsc.bcm.edu	36	7	140099639	140099639	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MLL3	58508	hgsc.bcm.edu	36	7	151593144	151593144	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FAM110A	83541	hgsc.bcm.edu	36	20	773678	773678	+	Silent	SNP	T	T	C	rs538094	by2Hit2Allele;byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RAD21L1	642636	hgsc.bcm.edu	36	20	1160260	1160260	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CST1	1469	hgsc.bcm.edu	36	20	23676528	23676528	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ASXL1	171023	hgsc.bcm.edu	36	20	30487371	30487371	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FAM83C	128876	hgsc.bcm.edu	36	20	33338444	33338444	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ATP9A	10079	hgsc.bcm.edu	36	20	49744045	49744045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CHEK2	11200	hgsc.bcm.edu	36	22	27421840	27421840	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NF2	4771	hgsc.bcm.edu	36	22	28380666	28380666	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APOL6	80830	hgsc.bcm.edu	36	22	34385344	34385344	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
TMPRSS6	164656	hgsc.bcm.edu	36	22	35810763	35810763	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
IL17REL	400935	hgsc.bcm.edu	36	22	48779878	48779878	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KHNYN	0	hgsc.bcm.edu	36	14	23971089	23971089	+	Missense_Mutation	SNP	A	A	C	rs3742520	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
HECTD1	25831	hgsc.bcm.edu	36	14	30652277	30652277	+	Silent	SNP	T	T	C	rs2273483	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CTAGE5	4253	hgsc.bcm.edu	36	14	38887779	38887779	+	Missense_Mutation	SNP	A	A	G	rs1140952	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FANCM	57697	hgsc.bcm.edu	36	14	44728203	44728203	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NDUFB1	4707	hgsc.bcm.edu	36	14	91657755	91657755	+	Silent	SNP	T	T	G	rs3818263	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RIN3	79890	hgsc.bcm.edu	36	14	92188422	92188422	+	Silent	SNP	G	G	A	rs3742716	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SERPINA4	5267	hgsc.bcm.edu	36	14	94104335	94104335	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
JAG2	3714	hgsc.bcm.edu	36	14	104686693	104686693	+	Missense_Mutation	SNP	C	C	T	rs9972231	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
OR10H5	284433	hgsc.bcm.edu	36	19	15766061	15766061	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NPAS1	4861	hgsc.bcm.edu	36	19	52235614	52235614	+	Silent	SNP	G	G	A	rs3745615	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SIGLEC6	946	hgsc.bcm.edu	36	19	56725018	56725018	+	Missense_Mutation	SNP	G	G	A	rs2005199	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZNF761	388561	hgsc.bcm.edu	36	19	58649938	58649938	+	Nonsense_Mutation	SNP	T	T	G	rs2708743	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZNF761	388561	hgsc.bcm.edu	36	19	58651380	58651380	+	Missense_Mutation	SNP	G	G	C	rs2617726	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MYST3	7994	hgsc.bcm.edu	36	8	41951495	41951495	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FAM164A	51101	hgsc.bcm.edu	36	8	79773265	79773265	+	Silent	SNP	A	A	G	rs1054283	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
COL14A1	7373	hgsc.bcm.edu	36	8	121279250	121279250	+	Silent	SNP	T	T	C	rs2305598	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
COL14A1	7373	hgsc.bcm.edu	36	8	121297860	121297860	+	Missense_Mutation	SNP	A	A	C	rs4870723	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
EFR3A	23167	hgsc.bcm.edu	36	8	133069118	133069118	+	Silent	SNP	A	A	G	rs2270875	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
TG	7038	hgsc.bcm.edu	36	8	134000930	134000930	+	Silent	SNP	T	T	C	rs853304	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PSCA	8000	hgsc.bcm.edu	36	8	143760533	143760533	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CYP11B2	1585	hgsc.bcm.edu	36	8	143993555	143993555	+	Silent	SNP	G	G	A	rs4546	byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ADCK5	203054	hgsc.bcm.edu	36	8	145573922	145573922	+	Missense_Mutation	SNP	A	A	C	rs6599528	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
UBE4B	10277	hgsc.bcm.edu	36	1	10153795	10153795	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ACADM	34	hgsc.bcm.edu	36	1	75978369	75978369	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CTBS	1486	hgsc.bcm.edu	36	1	84812543	84812543	+	Silent	SNP	G	G	A	rs2303307	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CDC7	8317	hgsc.bcm.edu	36	1	91749987	91749987	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ABCA4	24	hgsc.bcm.edu	36	1	94285191	94285191	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
OVGP1	5016	hgsc.bcm.edu	36	1	111758934	111758934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLC16A1	6566	hgsc.bcm.edu	36	1	113261957	113261957	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AMPD1	270	hgsc.bcm.edu	36	1	115018128	115018128	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLC22A15	55356	hgsc.bcm.edu	36	1	116363746	116363746	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CGN	57530	hgsc.bcm.edu	36	1	149769051	149769051	+	Missense_Mutation	SNP	C	C	T	rs34834099	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DCST1	149095	hgsc.bcm.edu	36	1	153286334	153286334	+	Missense_Mutation	SNP	A	A	C	rs11264300	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
OR6N1	128372	hgsc.bcm.edu	36	1	157002516	157002516	+	Missense_Mutation	SNP	A	A	G	rs857827	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DPT	1805	hgsc.bcm.edu	36	1	166964797	166964797	+	Silent	SNP	C	C	T	rs1052591	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KIF21B	23046	hgsc.bcm.edu	36	1	199239431	199239431	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FLVCR1	28982	hgsc.bcm.edu	36	1	211135218	211135218	+	Missense_Mutation	SNP	C	C	T	rs3207090	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AGT	189	hgsc.bcm.edu	36	1	228912417	228912417	+	Missense_Mutation	SNP	A	A	G	rs699	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RYR2	6262	hgsc.bcm.edu	36	1	235878518	235878518	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AHCTF1	25909	hgsc.bcm.edu	36	1	245080991	245080991	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
EPS8L2	64787	hgsc.bcm.edu	36	11	710197	710197	+	Silent	SNP	C	C	T	rs3087546	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
OR51A7	119687	hgsc.bcm.edu	36	11	4885442	4885442	+	Silent	SNP	C	C	T	rs7941509	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
TRIM66	9866	hgsc.bcm.edu	36	11	8619092	8619092	+	Missense_Mutation	SNP	T	T	C	rs11042023	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZBED5	58486	hgsc.bcm.edu	36	11	10832785	10832785	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MUC15	143662	hgsc.bcm.edu	36	11	26541256	26541256	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
C11orf41	25758	hgsc.bcm.edu	36	11	33552995	33552995	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
VPS37C	55048	hgsc.bcm.edu	36	11	60655940	60655940	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ROM1	6094	hgsc.bcm.edu	36	11	62138384	62138384	+	Silent	SNP	G	G	C	rs1801144	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NAALADL1	10004	hgsc.bcm.edu	36	11	64571528	64571528	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RSF1	51773	hgsc.bcm.edu	36	11	77063774	77063774	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GAB2	9846	hgsc.bcm.edu	36	11	77608097	77608097	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ANKK1	255239	hgsc.bcm.edu	36	11	112775999	112775999	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APOA4	337	hgsc.bcm.edu	36	11	116196844	116196844	+	Missense_Mutation	SNP	C	C	A	rs5110	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APOA4	337	hgsc.bcm.edu	36	11	116197071	116197071	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KIRREL3	84623	hgsc.bcm.edu	36	11	125821869	125821869	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FLI1	2313	hgsc.bcm.edu	36	11	128186014	128186014	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
BMP6	654	hgsc.bcm.edu	36	6	7790411	7790411	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GPLD1	2822	hgsc.bcm.edu	36	6	24570971	24570971	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NOTCH4	4855	hgsc.bcm.edu	36	6	32278347	32278347	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLC26A8	116369	hgsc.bcm.edu	36	6	36031224	36031224	+	Missense_Mutation	SNP	T	T	C	rs2295852	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GCM1	8521	hgsc.bcm.edu	36	6	53101249	53101249	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CASP8AP2	9994	hgsc.bcm.edu	36	6	90637758	90637758	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RSPO3	84870	hgsc.bcm.edu	36	6	127518209	127518209	+	Silent	SNP	G	G	A	rs1892172	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NMBR	4829	hgsc.bcm.edu	36	6	142441713	142441713	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SYNRG	0	hgsc.bcm.edu	36	17	33030504	33030504	+	Missense_Mutation	SNP	G	G	C	rs12944821	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KRT32	3882	hgsc.bcm.edu	36	17	36873925	36873925	+	Silent	SNP	C	C	T	rs12948056	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AARSD1	80755	hgsc.bcm.edu	36	17	38385171	38385171	+	Missense_Mutation	SNP	C	C	A	rs35444712	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APP	351	hgsc.bcm.edu	36	21	26185931	26185931	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
TCP10L	140290	hgsc.bcm.edu	36	21	32878450	32878450	+	Silent	SNP	T	T	C	rs2017816	by2Hit2Allele;byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KRTAP10-3	386682	hgsc.bcm.edu	36	21	44803020	44803020	+	Missense_Mutation	SNP	T	T	C	rs452472	by2Hit2Allele;byCluster	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KRTAP10-8	386681	hgsc.bcm.edu	36	21	44856992	44856992	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CLDN6	9074	hgsc.bcm.edu	36	16	3005597	3005597	+	Missense_Mutation	SNP	T	T	C	rs2257295	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FA2H	79152	hgsc.bcm.edu	36	16	73331447	73331447	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DYNLRB2	83657	hgsc.bcm.edu	36	16	79140998	79140998	+	Silent	SNP	C	C	T	rs11866734	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SMAD4	4089	hgsc.bcm.edu	36	18	46847404	46847404	+	Missense_Mutation	SNP	G	G	A	rs28936393	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ITPR1	3708	hgsc.bcm.edu	36	3	4679848	4679848	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
VHL	7428	hgsc.bcm.edu	36	3	10163208	10163208	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
OXNAD1	92106	hgsc.bcm.edu	36	3	16287568	16287568	+	Silent	SNP	C	C	T	rs842259	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SETD2	29072	hgsc.bcm.edu	36	3	47073752	47073752	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DOCK3	1795	hgsc.bcm.edu	36	3	51221292	51221292	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PBRM1	55193	hgsc.bcm.edu	36	3	52618725	52618725	+	Silent	SNP	T	T	C	rs3755806	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ATXN7	6314	hgsc.bcm.edu	36	3	63957122	63957122	+	Missense_Mutation	SNP	G	G	A	rs3774729	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PRICKLE2	166336	hgsc.bcm.edu	36	3	64114048	64114048	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
TMEM108	66000	hgsc.bcm.edu	36	3	134581496	134581496	+	Missense_Mutation	SNP	C	C	T	rs34111099	byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
EPHB1	2047	hgsc.bcm.edu	36	3	136153332	136153332	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DGKG	1608	hgsc.bcm.edu	36	3	187472790	187472790	+	Missense_Mutation	SNP	C	C	T	rs2193587	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
LEPREL1	55214	hgsc.bcm.edu	36	3	191172414	191172414	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CD163	9332	hgsc.bcm.edu	36	12	7523842	7523842	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLCO1B1	10599	hgsc.bcm.edu	36	12	21221097	21221097	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ITPR2	3709	hgsc.bcm.edu	36	12	26472196	26472196	+	Missense_Mutation	SNP	G	G	A	rs61751236	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
BICD1	636	hgsc.bcm.edu	36	12	32372360	32372360	+	Silent	SNP	G	G	C	rs3748275	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ABCD2	225	hgsc.bcm.edu	36	12	38234200	38234200	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SSH1	54434	hgsc.bcm.edu	36	12	107710006	107710006	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PTPN11	5781	hgsc.bcm.edu	36	12	111411269	111411269	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PITPNM2	57605	hgsc.bcm.edu	36	12	122037290	122037290	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ATP10A	57194	hgsc.bcm.edu	36	15	23491244	23491244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
INO80	54617	hgsc.bcm.edu	36	15	39063353	39063353	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FRMD5	84978	hgsc.bcm.edu	36	15	41953620	41953620	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLC28A2	9153	hgsc.bcm.edu	36	15	43341524	43341524	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RNF111	54778	hgsc.bcm.edu	36	15	57135221	57135221	+	Silent	SNP	C	C	A	rs1446239	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
LINGO1	84894	hgsc.bcm.edu	36	15	75694200	75694200	+	Silent	SNP	G	G	A	rs3743481	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
IGF1R	3480	hgsc.bcm.edu	36	15	97269635	97269635	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
XG	100132596	hgsc.bcm.edu	36	X	2739382	2739382	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
KDM6A	7403	hgsc.bcm.edu	36	X	44827681	44827681	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PHKA1	5255	hgsc.bcm.edu	36	X	71747724	71747724	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GLUD2	2747	hgsc.bcm.edu	36	X	120010395	120010395	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CD40LG	959	hgsc.bcm.edu	36	X	135558106	135558106	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ATP11C	286410	hgsc.bcm.edu	36	X	138714389	138714389	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
JAKMIP1	152789	hgsc.bcm.edu	36	4	6088614	6088614	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NAAA	27163	hgsc.bcm.edu	36	4	77055161	77055161	+	Missense_Mutation	SNP	A	A	G	rs6823734	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PDHA2	5161	hgsc.bcm.edu	36	4	96980400	96980400	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CLGN	4312	hgsc.bcm.edu	36	4	141541110	141541110	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GRIA2	2891	hgsc.bcm.edu	36	4	158473541	158473541	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CLCN3	1182	hgsc.bcm.edu	36	4	170845385	170845385	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SNX25	83891	hgsc.bcm.edu	36	4	186504723	186504723	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SDC1	6382	hgsc.bcm.edu	36	2	20267221	20267221	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SLC30A3	7781	hgsc.bcm.edu	36	2	27334679	27334679	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GTF3C2	2976	hgsc.bcm.edu	36	2	27419362	27419362	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FSHR	2492	hgsc.bcm.edu	36	2	49234922	49234922	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ATP6V1B1	525	hgsc.bcm.edu	36	2	71016597	71016597	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MPHOSPH10	10199	hgsc.bcm.edu	36	2	71219184	71219184	+	Silent	SNP	G	G	A	rs357756	by2Hit2Allele;byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PTCD3	55037	hgsc.bcm.edu	36	2	86186895	86186895	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
UBR3	130507	hgsc.bcm.edu	36	2	170392701	170392701	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MYO3B	140469	hgsc.bcm.edu	36	2	170948495	170948495	+	Silent	SNP	C	C	T	rs11675394	byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
STK36	27148	hgsc.bcm.edu	36	2	219270919	219270919	+	Missense_Mutation	SNP	G	G	A	rs1863704	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RHBDD1	84236	hgsc.bcm.edu	36	2	227487240	227487240	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
IFNA5	3442	hgsc.bcm.edu	36	9	21294926	21294926	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AQP3	360	hgsc.bcm.edu	36	9	33437424	33437424	+	Silent	SNP	C	C	G	rs591810	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SVEP1	79987	hgsc.bcm.edu	36	9	112315048	112315048	+	Missense_Mutation	SNP	C	C	T	rs10980419	byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GPR144	347088	hgsc.bcm.edu	36	9	126255599	126255599	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ABHD13	84945	hgsc.bcm.edu	36	13	107680236	107680236	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SPAG6	9576	hgsc.bcm.edu	36	10	22715821	22715821	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
MYPN	84665	hgsc.bcm.edu	36	10	69625243	69625243	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CDH23	64072	hgsc.bcm.edu	36	10	73207653	73207653	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CHST3	9469	hgsc.bcm.edu	36	10	73437723	73437723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PTEN	5728	hgsc.bcm.edu	36	10	89614269	89614269	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PTEN	5728	hgsc.bcm.edu	36	10	89682830	89682830	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CHUK	1147	hgsc.bcm.edu	36	10	101968553	101968553	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZDHHC11	79844	hgsc.bcm.edu	36	5	896723	896723	+	Missense_Mutation	SNP	C	C	A	rs3863148	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZDHHC11	79844	hgsc.bcm.edu	36	5	896815	896815	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ADAMTS12	81792	hgsc.bcm.edu	36	5	33624560	33624560	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
C6	5688	hgsc.bcm.edu	36	5	41189742	41189742	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ARRDC3	57561	hgsc.bcm.edu	36	5	90714510	90714510	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APC	324	hgsc.bcm.edu	36	5	112179103	112179103	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APC	324	hgsc.bcm.edu	36	5	112182622	112182622	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
AQPEP	0	hgsc.bcm.edu	36	5	115369537	115369537	+	Missense_Mutation	SNP	G	G	C	rs10078759	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
FSTL4	23105	hgsc.bcm.edu	36	5	132967552	132967552	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PCDHA10	56139	hgsc.bcm.edu	36	5	140217134	140217134	+	Missense_Mutation	SNP	C	C	G	rs251362	by2Hit2Allele;byCluster;byFrequency	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PCDHGA5	56110	hgsc.bcm.edu	36	5	140724274	140724274	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
GEMIN5	25929	hgsc.bcm.edu	36	5	154258328	154258328	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RNF145	153830	hgsc.bcm.edu	36	5	158520862	158520862	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
STK32B	55351	hgsc.bcm.edu	36	4	5104428	5104428	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PPCS	79717	hgsc.bcm.edu	36	1	42695157	42695158	+	Frame_Shift_Ins	INS	-	-	TT	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
PRKRA	8575	hgsc.bcm.edu	36	2	179023981	179023982	+	Frame_Shift_Del	DEL	GC	GC	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	GC	GC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RBM44	375316	hgsc.bcm.edu	36	2	238390728	238390729	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
APC	324	hgsc.bcm.edu	36	5	112203850	112203851	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
OR2B2	81697	hgsc.bcm.edu	36	6	27987895	27987896	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
RP1L1	94137	hgsc.bcm.edu	36	8	10505091	10505096	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	TCCTTC	TCCTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SPRYD5	84767	hgsc.bcm.edu	36	11	55410186	55410186	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
B3GNT6	192134	hgsc.bcm.edu	36	11	76429252	76429252	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
DDHD1	80821	hgsc.bcm.edu	36	14	52689230	52689231	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
C17orf97	400566	hgsc.bcm.edu	36	17	263602	263631	+	Frame_Shift_Del	DEL	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
SOX9	6662	hgsc.bcm.edu	36	17	67631291	67631292	+	Frame_Shift_Ins	INS	-	-	CC	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
ZNF516	9658	hgsc.bcm.edu	36	18	72219946	72219946	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
CDH26	60437	hgsc.bcm.edu	36	20	58021179	58021179	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215568	+	In_Frame_Ins	INS	-	-	AAGTCCCCTGAGAAGGCC	novel	unknown	TCGA-DC-6681-01A-11D-1826-10	TCGA-DC-6681-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	821cef24-769d-4f2d-8006-819cda661112	ffc9adfb-e651-4424-a0a7-2ea6a0340f63
