writing sdrf to READ.merger.sdrf.txt

------------------------------------------------------------------
2015-08-21 22:53:26.343042
. ['/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/READ/19079350/infile1.input.tsv', '/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/READ/19079350/infile3.input.tsv', '/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/READ/19079350/infile4.input.tsv']

Make a softlink......

Flag: True.
Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/READ/19079350/infile1.input.tsv

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-3913-01.wig.txt
('', None)
0
8d50d6224396c05444a0acaa5c74e3d9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3726-01.wig.txt
('', None)
0
19a737afe8cfec82effa2a055f977ea3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3727-01.wig.txt
('', None)
0
68d15352f1dcaf85f76151cbccbb79d4
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3878-01.wig.txt
('', None)
0
da769941824ed07cd6068d63d5bb5785
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3881-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3882-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3883-01.wig.txt
('', None)
0
e1cdf6117ce96ceb14f11f377f089a0a
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3887-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3890-01.wig.txt
('', None)
0
5d99949dafdbccdf621d8dd4c3a3569b
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3892-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3893-01.wig.txt
('', None)
0
1008c2572f791d999a8e5191c50f9f76
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3894-01.wig.txt
('', None)
0
b24ff0c3451f437c2959e77daa2304ce
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3896-01.wig.txt
('', None)
0
d951028b5cddb77b3faad7d94b4110c1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3898-01.wig.txt
('', None)
0
f608d6fd7eeaf3f109f53266b10d16bb
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3901-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3902-01.wig.txt
('', None)
0
d3a065c05d40b1873cf2f62f3a3c5bba
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3909-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3999-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-4001-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-4005-01.wig.txt
('', None)
0
5188bacdd2864882a58a29a0091d288f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-4007-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-4008-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-4015-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A002-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A00H-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A011-01.wig.txt
('', None)
0
44731ab8e39ed32f11dfa2b9422b2c81
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A014-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A01L-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A01W-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A01Y-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A020-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A025-01.wig.txt
('', None)
0
49f7b76b8fac1cb39ecb81ae50d6bcd4
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A026-01.wig.txt
('', None)
0
4874cee2a7a1a55a34e856324dfc1482
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A02G-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A02N-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A02X-01.wig.txt
('', None)
0
a3c20ec8a0122609eeb7fd65b0c7562f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A032-01.wig.txt
('', None)
0
c1ba58ba4b5a414970a924847b3bed6d
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-A036-01.wig.txt
('', None)
0
9f04294c471f08e7153c3e680cb50c47
It is not in the dictionary
Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/READ/19079350/infile3.input.tsv

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-2687-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-2693-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-4110-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-5654-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-6136-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-6655-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AF-6672-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3731-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3732-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3742-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AG-3885-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AH-6544-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AH-6547-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AH-6549-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AH-6643-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-AH-6644-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CI-6619-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CI-6620-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CI-6621-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CI-6622-01.wig.txt
('', None)
0
65233abea96af98ca1c02163684d2f3f
It is in the dictionary
TCGA-AF-2687-01.wig.txt

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CI-6624-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CL-5917-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-CL-5918-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-5337-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-5869-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6155-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6157-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6158-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6160-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6681-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6682-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DC-6683-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DT-5265-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DY-A0XA-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DY-A1DD-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-DY-A1DF-01.wig.txt
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It is in the dictionary
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-EF-5830-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-EI-6506-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-EI-6507-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-EI-6508-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-EI-6510-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6464-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6465-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6571-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6702-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6811-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6812-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-F5-6813-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-G5-6235-01.wig.txt
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It is in the dictionary
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md5sum /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-G5-6641-01.wig.txt
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It is in the dictionary
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Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/READ/19079350/infile4.input.tsv

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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A002-01.wig.txt
('', None)
0
4173c5c97bf2ef301d6a512d9be026f1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A008-01.wig.txt
('', None)
0
d784690a2508a7b175b39b277926628f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A00C-01.wig.txt
('', None)
0
38d56b007f38ebbe84d627fe7255a97f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A00Y-01.wig.txt
('', None)
0
34cf74f71f5cf6eed9ad78e49a4e662f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A011-01.wig.txt
('', None)
0
a26c52b748caa69a42a919aaeefad2a0
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A014-01.wig.txt
('', None)
0
3a4ff59421217ed3fde559edc1b8ce95
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A015-01.wig.txt
('', None)
0
9adee830d7afcb2977ab4ba025d0046a
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A016-01.wig.txt
('', None)
0
261e27f6e4f5d504412ce21f185f14d9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna_automated__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA_automated.Level_2.2.0.0/TCGA-AG-A01L-01.wig.txt
('', None)
0
cad02e943a51779e9320809bf1bdc396
It is not in the dictionary
Make a softlink is done.


