Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	TVaf_SOL	NTotCov_SOL	NVarCov_SOL	NVaf_SOL	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Ttot_rna	Tvar_rna	Tvaf_rna	note	germline-maf-frequency	IGV
CSF3R	1441	mdanderson.org	37	1	36939198	36939198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_156039	exon6	c.G511T	p.G171W	AGTCCCCTTGGGT		39	3	0.08	46	0	0				20	0	0.00			
COPA	1314	hgsc.bcm.edu;bcgsc.ca	37	1	160264296	160264298	+	In_Frame_Del	DEL	TCT	TCT	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	TCT	TCT					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	COPA	NM_001098398	exon25	c.2680_2682del	p.894_894del	TCCAGATCTTCTT		231	46	0.20	189	0	0		181		629	0	0.00			
FMO1	2326	mdanderson.org	37	1	171251463	171251463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_002021	exon7	c.G1174T	p.V392F	GTTCGAGTCCTGA		127	5	0.04	103	0	0				2	0	0.00			
PHYH	5264	hgsc.bcm.edu	37	10	13330436	13330436	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	PHYH,NS,carcinoma,-1,2	PHYH	NM_006214	exon6	c.G602A	p.R201Q	TTGTTCCGGCTGA		72	3	0.04	73	1	0.0136986301		-1	2	73	0	0.00			
PCDH15	65217	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	55583018	55583018	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001142763	exon35	c.A4489G	p.I1497V	CCTCAATAGTATT		94	24	0.26	88	0	0				0	0				
NPFFR1	64106	mdanderson.org	37	10	72014845	72014845	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_022146	exon4	c.G1161A	p.S387S	AGGGCCCGACTCA		14	2	0.14	12	0	0				0	0				
ZMIZ1	57178	mdanderson.org	37	10	81061922	81061922	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_020338	exon18	c.G2078T	p.G693V	TGCAAGGACTCCT		28	3	0.11	60	0	0				283	0	0.00			
INPP5A	3632	mdanderson.org	37	10	134523943	134523943	+	Silent	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_005539	exon8	c.G630T	p.L210L	GGCACTGGGCTAC		54	3	0.06	67	0	0				44	0	0.00			
VENTX	27287	mdanderson.org	37	10	135053695	135053695	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_014468	exon3	c.G662T	p.C221F	CCTGCTGCGGGCA		18	2	0.11	23	0	0				266	0	0.00			
OR51E1	143503	broad.mit.edu	37	11	4674157	4674157	+	Missense_Mutation	SNP	G	G	T	rs192878981	bycluster;by1000genomes;alternate_allele	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	OR51E1,caecum,carcinoma,-1,3	OR51E1	NM_152430	exon2	c.G401T	p.R134L	CACTGCGCCATGC		73	5	0.07	82	0	0		67	3	0	0				
VWCE	220001	mdanderson.org	37	11	61039229	61039229	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_152718	exon14	c.G1703A	p.C568Y	AGAGAGCAGCCTG		65	4	0.06	57	0	0				24	0	0.00			
.	0	bcgsc.ca	37	11	62815368	62815368	+	RNA	SNP	G	G	A	rs7125680	bycluster;byfrequency;by2hit2allele;byhapmap	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	GGTGCAGCATGCC		34	10	0.29	19	0	0				0	0				
PICALM	8301	ucsc.edu	37	11	85685760	85685760	+	Silent	SNP	T	T	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	T	T					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	PICALM	NM_007166	exon19	c.A1935G	p.S645S	TGCTCCTGATACA		43	4	0.09	75	0	0		82		144	0	0.00			
PGR	5241	mdanderson.org	37	11	100999388	100999388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_000926	exon1	c.C414A	p.S138R	CCAAGAGCTGGTG		23	2	0.09	21	0	0				0	0				
ST14	6768	mdanderson.org	37	11	130060496	130060496	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_021978	exon7	c.G782T	p.R261L	CCTTCCGCAGCTT		49	3	0.06	51	0	0				16	0	0.00			
LRP6	4040	broad.mit.edu	37	12	12303884	12303884	+	Silent	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	LRP6	NM_002336	exon13	c.C2880A	p.P960P	GTGGATGGGAAGG		203	4	0.02	165	1	0.0060606061		170		58	0	0.00			
KRAS	3845	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A	rs121913529	bycluster	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	KRAS_ENST00000256078,NS,adenocarcinoma,0,25136	KRAS_ENST00000256078	NM_004985	exon2	c.G35T	p.G12V	ACGCCACCAGCTC		244	43	0.18	175	0	0		0	25136	45	10	0.22			
PLXNC1	10154	mdanderson.org	37	12	94542977	94542977	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_005761	exon1	c.C230T	p.S77L	GCCTCTCGCGCCT		29	3	0.10	25	0	0				3	0	0.00			
METAP2	10988	broad.mit.edu	37	12	95867964	95867964	+	Silent	SNP	T	T	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	METAP2	NM_006838	exon1	c.T9G	p.G3G	GGCGGGTGTGGAG		110	25	0.23	90	18	0.2		28		235	16	0.07			
.	0	broad.mit.edu	37	12	127423596	127423597	+	RNA	DEL	TG	TG	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	TG	TG					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	TGTGTTTGTGTGT		8	4	0.50	12	0	0				0	0				
GPC5	2262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	92345961	92345961	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_004466	exon3	c.G846A	p.L282L	CTGCCTGGCGCAC		47	22	0.47	57	0	0				0	0				
ATG2B	55102	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	96772134	96772134	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_018036	exon31	c.G4525T	p.V1509F	TTATAACTGGTTC		99	29	0.29	81	0	0				13	5	0.38			
GABPB1	2553	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	50581739	50581739	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_005254	exon7	c.C860G	p.S287C	GGAATAGAGTGCA		122	27	0.22	71	0	0				143	37	0.26			
BNIP2	663	mdanderson.org	37	15	59981599	59981599	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_004330	exon1	c.C41A	p.P14Q	CGTGGCGGCGGCG		54	3	0.06	43	0	0				0	0				
GOLGA6D	653643	broad.mit.edu	37	15	75580675	75580676	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	TG	TG					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	GOLGA6D	NM_001145224	exon7	c.534_535del	p.178_179del	CTGTGCTGTGTCT		12	4	0.33	8	0	0		9		0	0				
KREMEN2	79412	mdanderson.org	37	16	3017029	3017029	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_024507	exon6	c.C759T	p.G253G	GCCAGGCGCCGCG		16	2	0.13	15	0	0				3	0	0.00			
MEFV	4210	mdanderson.org	37	16	3304633	3304633	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_000243	exon2	c.C435T	p.S145S	GGGCTGGCTGCAC		36	3	0.08	29	0	0				0	0				
TAOK2	9344	mdanderson.org	37	16	29996705	29996705	+	Missense_Mutation	SNP	C	C	T	rs373048486		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001252043	exon14	c.C1594T	p.R532W	GCGCAGCGGGCTG		40	3	0.08	39	0	0				222	0	0.00			
ITGAL	3683	mdanderson.org	37	16	30532938	30532938	+	Silent	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_002209	exon31	c.G3465T	p.L1155L	CTGCCTGAAGCCC		42	3	0.07	56	0	0				124	0	0.00			
CCDC144C	348254	hgsc.bcm.edu	37	17	20279706	20279706	+	RNA	SNP	C	C	T	rs146426615	by1000genomes	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	TCTTCCCGCAAAC		89	22	0.25	89	0	0	0.005			170	0	0.00			
RNF43	54894	mdanderson.org	37	17	56435856	56435856	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_017763	exon9	c.C1281A	p.H427Q	AGCAGGGTGCTGT		72	4	0.06	59	0	0				15	0	0.00			
.	0	broad.mit.edu	37	17	77899577	77899577	+	RNA	DEL	C	C	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	TCTGGTCCCCCGG		6	2	0.33	5	0	0				0	0				
TXNDC2	84203	hgsc.bcm.edu	37	18	9886894	9886894	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	TXNDC2_ENST00000306084,bladder,carcinoma,0,4	TXNDC2_ENST00000306084	NM_001098529	exon2	c.A418G	p.K140E	TCAGAAAAAGCCA		58	3	0.05	90	1	0.0111111111		0	4	0	0				
CABLES1	91768	mdanderson.org	37	18	20716388	20716388	+	Missense_Mutation	SNP	C	C	T	rs371732182		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001100619	exon1	c.C662T	p.A221V	TGCCGGCGGCCGC		32	3	0.09	56	0	0				13	0	0.00			
INSR	3643	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	19	7143086	7143086	+	Silent	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_000208	exon12	c.C2283A	p.R761R	GGACCTGCGTTTC		112	5	0.04	99	0	0				28	0	0.00			
ANKLE1	126549	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	17396520	17396520	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	FLJ39369,NS,carcinoma,-2,1	FLJ39369	NM_152363	exon8	c.A1567C	p.I523L	CGTCAGATCTTGG		90	26	0.29	72	0	0		-2	1	5	4	0.80			
MEF2BNB-MEF2B	4207	mdanderson.org	37	19	19256659	19256659	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_005919	exon10	c.C942A	p.C314X	CAGGCCGCAGAGG		37	3	0.08	30	0	0				4	0	0.00			
ZNF738	148203	hgsc.bcm.edu	37	19	21558947	21558947	+	RNA	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	CATAGGGCCATCT		36	8	0.22	17	0	0				5	2	0.40			
GRAMD1A	57655	broad.mit.edu	37	19	35510143	35510143	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	GRAMD1A	NM_020895	exon12	c.G1262T	p.R421L	AGCGCCGGGTGCT		109	3	0.03	102	0	0		39		578	0	0.00			
.	147711	bcgsc.ca	37	19	44977078	44977078	+	RNA	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	GTATAGCTCTGTT		132	8	0.06	92	0	0				0	0				
HIF3A	64344	broad.mit.edu	37	19	46825102	46825102	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	HIF3A_ENST00000377670,bladder,carcinoma,0,2	HIF3A	NM_152795	exon10	c.A1214C	p.D405A	CCGCTGACCCCCG		99	15	0.15	87	7	0.0804597701		154	2	19	3	0.16			
ASXL2	55252	mdanderson.org	37	2	25965421	25965421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_018263	exon12	c.C3785A	p.A1262D	TCTCTGGCTAGGG		86	4	0.05	75	0	0				64	0	0.00			
SFTPB	6439	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	2	85890852	85890852	+	Missense_Mutation	SNP	C	C	T	rs371267944		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_198843	exon8	c.G827A	p.R276H	AGCATGCGGCCCA		96	5	0.05	61	0	0				1	0	0.00			
FER1L5	90342	mdanderson.org	37	2	97361797	97361797	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	FER1L5,right_upper_lobe,carcinoma,-2,1	FER1L5	NM_001113382	exon36	c.G4147T	p.E1383X	CTGTCTGAGAAGA		47	3	0.06	34	0	0		-2	1	0	0				
IMP4	92856	mdanderson.org	37	2	131103261	131103261	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_033416	exon5	c.G428T	p.R143L	AGCATCGGGGCAC		59	3	0.05	46	0	0				716	0	0.00			
CCDC150	284992	broad.mit.edu	37	2	197511227	197511227	+	Splice_Site	SNP	A	A	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	CCDC150	NM_001080539	exon2	c.A175G	p.R59G	GAAAAAAGGTAAC		138	3	0.02	125	0	0		96		1	0	0.00			
SNRPB	6628	hgsc.bcm.edu;mdanderson.org	37	20	2442419	2442419	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	SNRPB,NS,carcinoma,+1,1	SNRPB	NM_198216	exon7	c.C706T	p.R236C	GTGGGCGCATTCC		92	4	0.04	84	0	0		1	1	3376	3	0.00			
ANKRD30BP2	0	broad.mit.edu	37	21	14415103	14415103	+	RNA	SNP	C	C	G	rs369320513	bycluster	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	CAGGCTCTGCAAT		33	6	0.18	27	0	0				0	0				
ANKRD30BP2	0	broad.mit.edu	37	21	14415122	14415122	+	RNA	SNP	C	C	T	rs373171837	bycluster	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	GGGAGGCTTGTGC		30	5	0.17	28	0	0				0	0				
C22orf43	51233	broad.mit.edu	37	22	23974156	23974156	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	C22orf43	NM_016449	exon1	c.A55G	p.K19E	CGTCCTTCCCCCT		233	8	0.03	159	3	0.0188679245		18		0	0				
TCF20	6942	broad.mit.edu	37	22	42608228	42608228	+	Silent	SNP	T	T	C	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	TCF20	NM_181492	exon1	c.A3084G	p.G1028G	AGGGTCTCCCCCT		95	4	0.04	85	0	0		164		109	0	0.00			
PLXNB2	23654	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	50728449	50728449	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_012401	exon3	c.G565T	p.D189Y	TCCGGTCCAACAG		189	32	0.17	130	0	0				154	28	0.18			
.	0	broad.mit.edu	37	3	10035779	10035783	+	RNA	DEL	AGTCT	AGTCT	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	AGTCT	AGTCT					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	AAGAGAAGTCTGA		12	4	0.33	8	0	0				1	0	0.00			
CADM2	253559	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	86010725	86010725	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	CADM2_ENST00000383699,NS,lymphoid_neoplasm,-2,2	CADM2_ENST00000383699	NM_001167675	exon8	c.A898G	p.N300D	ACGGATAATGGTA		119	18	0.15	109	0	0		-2	2	1	0	0.00			
DHFRL1	200895	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	93780000	93780000	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001195643	exon2	c.G356C	p.S119T	ACAGAACTGCCAC		177	27	0.15	184	0	0				10	3	0.30			
ALDH1L1	10840	mdanderson.org	37	3	125872417	125872417	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001270364	exon7	c.C758A	p.T253K	AAAAATGTCAGTT		91	5	0.05	63	1	0.0158730159				0	0				
EIF4G1	1981	mdanderson.org	37	3	184042695	184042695	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001194947	exon18	c.G2670T	p.E890D	GGAAGAGCTGGAA		49	3	0.06	39	0	0				666	0	0.00			
MGC45800	0	mdanderson.org	37	4	183063907	183063907	+	RNA	SNP	C	C	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	CTGGTCCCAGGAG		28	3	0.11	23	0	0				0	0				
MROH2B	133558	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	41009457	41009457	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	HEATR7B2,NS,carcinoma,-1,3	HEATR7B2	NM_173489	exon32	c.G3345A	p.G1115G	GAGTTTCCCACTG		69	8	0.12	85	0	0		-1	3	0	0				
CCNI2	645121	mdanderson.org	37	5	132084162	132084162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	CCNI2,NS,carcinoma,-2,1	CCNI2	NM_001039780	exon2	c.G553T	p.V185L	ATTTCAGTGAAGG		54	4	0.07	69	0	0		-2	1	33	0	0.00			
ZBTB9	221504	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	33424120	33424120	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_152735	exon2	c.A1243G	p.I415V	TGTGGCATCTGCA		102	23	0.23	72	0	0				170	51	0.30			
TNFRSF21	27242	mdanderson.org	37	6	47277201	47277201	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_014452	exon1	c.G47A	p.R16H	GCGATGCGGCTGC		18	3	0.17	12	0	0				71	1	0.01			
C6orf70	55780	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	170159980	170159980	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_018341	exon7	c.C652A	p.L218M	CAGTTACTGAAGA		80	17	0.21	67	0	0				61	16	0.26			
RNF216	54476	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	5781139	5781139	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	RNF216	NM_207111	exon4	c.T509A	p.V170D	GGGTTGACAATGT		261	50	0.19	185	2	0.0108108108		71		329	76	0.23			
C7orf26	79034	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	6634134	6634134	+	Silent	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_024067	exon3	c.G483T	p.P161P	GGTGCCGGGATCC		125	20	0.16	89	0	0				404	80	0.20			
ZNF680	340252	ucsc.edu	37	7	63981631	63981631	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic		RNA-Seq	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	ZNF680,NS,carcinoma,+1,1	ZNF680	NM_178558	exon4	c.C1501T	p.R501W	AGGACCGGTTAAA		180	1	0.01	132	0	0		58	1	105	24	0.23			
CASD1	64921	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	94167043	94167043	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_022900	exon9	c.T1103G	p.L368X	TACTTTTACAATC		172	39	0.23	99	0	0				67	11	0.16			
EPHB4	2050	hgsc.bcm.edu;broad.mit.edu	37	7	100421432	100421432	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	EPHB4,NS,carcinoma,0,1	EPHB4	NM_004444	exon3	c.246delC	p.G82fs	ACGGCGCCCCGCC		72	11	0.15	48	0	0		106		300	0	0.00			
KCP	375616	broad.mit.edu	37	7	128548302	128548304	+	RNA	DEL	AAG	AAG	-	rs139059512	by1000genomes;alternate_allele	TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	AAG	AAG					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	KCP	.	.	.	.	GAAAGAAAGAAGA		12	6	0.50	9	0	0		16		0	0				
XKR6	286046	mdanderson.org	37	8	10755923	10755923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	XKR6,colon,carcinoma,0,1	XKR6	NM_173683	exon3	c.G1465A	p.A489T	TCATTGCGATCCC		68	4	0.06	40	0	0		0	1	0	0				
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	110498968	110498968	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_177531	exon59	c.A9798T	p.E3266D	TGGTGAAGATTAC		287	47	0.16	195	0	0				0	0				
RAD21	5885	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	117861253	117861254	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	CT	CT					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	RAD21	NM_006265	exon13	c.1636_1637del	p.546_546del	CGCCCCCTGATGC		162	33	0.20	192	0	0		95		563	164	0.29			
.	441420	bcgsc.ca	37	9	45376969	45376969	+	RNA	SNP	C	C	A	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	.	.	.	.	TCTCAGCACCCAG		65	14	0.22	57	3	0.0526315789				1	0	0.00			
AMER1	139285	mdanderson.org	37	X	63410102	63410102	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_152424	exon2	c.G3065A	p.R1022H	GAGGGACGAGCTA		76	4	0.05	61	0	0				19	0	0.00			
SRPK3	26576	mdanderson.org	37	X	153046776	153046776	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAF6-01A-11D-A42Y-10	TCGA-2G-AAF6-10A-01D-A433-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	64a7112f-6a25-40c7-9e6a-c9bf107e05a4	9a637380-4a84-4cfc-8a4c-4a61515e9229	.	.	NM_001170761	exon2	c.G165T	p.Q55H	GGAACAGGAAGAC		127	5	0.04	136	0	0				0	0				
