Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	TVaf_SOL	NTotCov_SOL	NVarCov_SOL	NVaf_SOL	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Ttot_rna	Tvar_rna	Tvaf_rna	note	germline-maf-frequency	IGV
PTPRF	5792	mdanderson.org	37	1	44064408	44064408	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_002840	exon13	c.C2137T	p.R713W	CCTCCGCGGAAGG		70	4	0.06	117	0	0				3	0	0.00			
FPGT-TNNI3K	100144878	bcgsc.ca;mdanderson.org	37	1	74946064	74946064	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	AACCGAGCAAGGG		63	5	0.08	51	0	0				0	0				
BCL9	607	hgsc.bcm.edu;broad.mit.edu	37	1	147084715	147084715	+	Silent	SNP	T	T	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	BCL9_ENST00000234739,right_upper_lobe,carcinoma,0,1	BCL9_ENST00000234739	NM_004326	exon5	c.T87C	p.R29R	GGTCCGTCCCCCT		61	3	0.05	74	0	0		0	1	1	0	0.00			
DHX9	1660	mdanderson.org	37	1	182852411	182852411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001357	exon25	c.C3052T	p.R1018C	GAAGGGCGTAATG		119	5	0.04	123	0	0				48	0	0.00			
TRIM67	440730	mdanderson.org	37	1	231299690	231299690	+	Silent	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001004342	exon1	c.G975T	p.L325L	TTATCTGTGCCTG		48	3	0.06	79	0	0				0	0				
CAMK2G	818	mdanderson.org	37	10	75585052	75585052	+	Silent	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001204492	exon15	c.C1107A	p.P369P	CTGCAAGGGCGCG		42	3	0.07	83	0	0				1	0	0.00			
HPS1	3257	bcgsc.ca	37	10	100184075	100184075	+	Silent	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	HPS1,colon,carcinoma,-1,1	HPS1	NM_000195	exon14	c.C1392A	p.S464S	CTCCCAGGAGGAT		49	4	0.08	70	0	0		65	1	28	0	0.00			
FGFR2	2263	mdanderson.org	37	10	123256223	123256223	+	Silent	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_022970	exon13	c.C1689A	p.V563V	AACTATGACATAG		75	4	0.05	84	0	0				1	0	0.00			
CDKN1C	1028	mdanderson.org	37	11	2905277	2905277	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	CDKN1C,NS,carcinoma,0,1	CDKN1C	NM_000076	exon2	c.G908T	p.G303V	CCCACGCCAGGGG		30	3	0.10	71	0	0		0	1	1	0	0.00			
FOLH1	2346	mdanderson.org	37	11	49204790	49204790	+	Silent	SNP	A	A	G	rs76509850	bycluster;byfrequency	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_004476	exon7	c.T831C	p.Y277Y	ATAAGCATATTCT		153	7	0.05	159	0	0	0.006			0	0				
TMX2	51075	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	57505458	57505458	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_015959	exon3	c.G324A	p.L108L	CCGCTTGGATATT		121	18	0.15	209	0	0				1	0	0.00			
C11orf30	56946	broad.mit.edu	37	11	76257194	76257194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	C11orf30	NM_020193	exon20	c.G3627T	p.E1209D	TAGAGAGTCCTGT		122	4	0.03	151	0	0		123		0	0				
TENM4	26011	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	78780952	78780952	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001098816	exon5	c.C38G	p.T13S	CGCCGGGTCAGCG		34	7	0.21	63	0	0				0	0				
PRDM10	56980	mdanderson.org	37	11	129788444	129788444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_020228	exon15	c.G2216A	p.R739H	ATGCCGCGCCGCC		43	3	0.07	66	0	0				0	0				
TRAFD1	10906	mdanderson.org	37	12	112589913	112589913	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001143906	exon10	c.T1588C	p.S530P	TCTTTCTCCCCTG		38	3	0.08	71	0	0				13	0	0.00			
NOC4L	79050	mdanderson.org	37	12	132632486	132632486	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_024078	exon6	c.G665T	p.R222L	CCCGCCGGGAGCC		41	3	0.07	62	0	0				22	0	0.00			
.	0	broad.mit.edu	37	14	19857036	19857036	+	RNA	SNP	A	A	G	rs374719458		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	ATAATAAAGTTCA		56	7	0.13	50	1	0.02				2	0	0.00			
RPS6KL1	83694	mdanderson.org	37	14	75378050	75378050	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_031464	exon6	c.C565T	p.R189W	TCAGCCGCTCCCT		40	3	0.08	79	0	0				0	0				
DIO2	1734	broad.mit.edu	37	14	80669620	80669620	+	Silent	SNP	A	A	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	DIO2	.	.	.	.	ATCCTCACCCAAT		204	38	0.19	162	31	0.1913580247		73		0	0				
CHGA	1113	broad.mit.edu;mdanderson.org	37	14	93399135	93399135	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	CHGA	NM_001275	exon7	c.A1229G	p.Q410R	CCCTCCAGGTCCG		77	5	0.06	85	0	0		32		2	0	0.00			
AHNAK2	113146	broad.mit.edu	37	14	105406606	105406606	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	AHNAK2	NM_138420	exon7	c.C15182A	p.T5061K	TTTTCTGTGTCTT		212	6	0.03	230	0	0		719		1	0	0.00			
.	646507	bcgsc.ca	37	15	23469716	23469716	+	RNA	SNP	G	G	A	rs62001522		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	GAGGAGGCCACGG		38	10	0.26	35	1	0.0285714286				0	0				
DISP2	85455	mdanderson.org	37	15	40661845	40661845	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_033510	exon8	c.A3532T	p.T1178S	TTTGACACCAGCA		30	3	0.10	40	0	0				0	0				
PLEKHO2	80301	mdanderson.org	37	15	65157774	65157774	+	Missense_Mutation	SNP	G	G	A	rs151003394	bycluster;byfrequency;by1000genomes	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_025201	exon6	c.G1160A	p.R387H	ATCCCCGCTGCTC		40	3	0.08	66	0	0	0.002			29	0	0.00			
LMAN1L	79748	mdanderson.org	37	15	75108636	75108636	+	Missense_Mutation	SNP	G	G	T	rs3803568	bycluster;byfrequency;byhapmap;by1000genomes;alternate_allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_021819	exon2	c.G314T	p.R105L	GGCGCCGGGGAGC		34	3	0.09	43	0	0				0	0				
IQGAP1	8826	hgsc.bcm.edu;broad.mit.edu	37	15	91037943	91037944	+	Splice_Site	DEL	AG	AG	-	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	AG	AG					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	IQGAP1	.	.	.	.	TTTTACAGAGTCT		162	12	0.07	189	0	0		140		0	0				
ZNF646	9726	mdanderson.org	37	16	31087875	31087875	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_014699	exon2	c.G230T	p.C77F	TCCCCTGTACCAC		50	3	0.06	82	0	0				2	0	0.00			
TNFSF12	8742	mdanderson.org	37	17	7460571	7460571	+	Silent	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_003809	exon7	c.G654T	p.L218L	GGCCCTGCGGCCA		45	3	0.07	65	0	0				56	0	0.00			
TEKT3	64518	broad.mit.edu	37	17	15217536	15217536	+	Missense_Mutation	SNP	G	G	T	rs143711449	alternate_allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	TEKT3,NS,adenocarcinoma,+1,1	TEKT3	NM_031898	exon6	c.C746A	p.A249E	TGGGACGCTCTGT		98	5	0.05	115	0	0		64	1	0	0				
FMNL1	752	mdanderson.org	37	17	43321261	43321261	+	Missense_Mutation	SNP	C	C	T	rs371426654		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_005892	exon18	c.C2317T	p.R773W	GAGCAGCGGCCAA		46	3	0.07	56	0	0				42	0	0.00			
UBE2Z	65264	mdanderson.org	37	17	46985927	46985927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_023079	exon1	c.C62T	p.A21V	CCGGGGCGAGCAG		16	2	0.13	16	0	0				2	0	0.00			
SMCHD1	23347	mdanderson.org	37	18	2705754	2705754	+	Silent	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	SMCHD1,NS,carcinoma,0,3	SMCHD1	NM_015295	exon14	c.C1905T	p.G635G	TTATGGCGATCAT		49	3	0.06	49	1	0.0204081633		0	3	2	0	0.00			
INO80C	125476	broad.mit.edu;bcgsc.ca;mdanderson.org	37	18	33060445	33060445	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	INO80C	NM_001098817	exon4	c.C347A	p.P116H	GGCAAAGGTTTGG		107	6	0.06	126	0	0		18		23	0	0.00			
DNMT1	1786	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10291231	10291231	+	Silent	SNP	A	A	G	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001130823	exon4	c.T240C	p.A80A	GACTTTAGCCAGG		61	8	0.13	90	0	0				0	0				
SMARCA4	6597	mdanderson.org	37	19	11097625	11097625	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_003072	exon5	c.C805T	p.P269S	GGCGTGCCCCCCG		15	2	0.13	20	0	0				0	0				
INSL3	3640	mdanderson.org	37	19	17927833	17927833	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001265587	exon3	c.C321A	p.C107X	CATGGAGCAGATG		34	3	0.09	48	0	0				8	0	0.00			
CPT1C	126129	mdanderson.org	37	19	50215119	50215119	+	Silent	SNP	G	G	A	rs375017702	alternate_allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001199752	exon17	c.G1920A	p.L640L	GGCTCTGCTGAAG		31	3	0.10	69	0	0				4	0	0.00			
CLEC11A	6320	broad.mit.edu;mdanderson.org	37	19	51227265	51227265	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	CLEC11A	NM_002975	exon2	c.A251G	p.E84G	AGGGGGAGGAAGA		89	5	0.06	119	0	0		23		2	0	0.00			
.	0	broad.mit.edu	37	19	52646132	52646133	+	RNA	INS	-	-	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	-	-					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	GGGAGAATTTTTT		9	3	0.33	7	0	0				3	0	0.00			
ZNF525	170958	broad.mit.edu	37	19	53879109	53879109	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	ZNF525	.	.	.	.	ATACAGGGACGTG		50	5	0.10	50	1	0.02		35		8	0	0.00			
IL11	3589	mdanderson.org	37	19	55879667	55879667	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_000641	exon4	c.G340T	p.A114S	CACCTGCCCGGCG		36	3	0.08	68	0	0				0	0				
RPS5	6193	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	58904766	58904766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001009	exon4	c.G359T	p.G120V	ACAGTGGTCCCCG		33	8	0.24	51	0	0				1930	568	0.29			
CEP68	23177	mdanderson.org	37	2	65299480	65299480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_015147	exon3	c.C1250A	p.A417D	AGCCAGCCCTGAG		43	3	0.07	74	0	0				5	0	0.00			
.	0	broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	90212209	90212209	+	RNA	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	GAGCCTGAAGATT		225	25	0.11	227	1	0.0044052863				29	0	0.00			
NCKAP5	344148	mdanderson.org	37	2	133543187	133543187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	NCKAP5,caecum,carcinoma,0,1	NCKAP5	NM_207363	exon14	c.C1197A	p.S399R	AATGTGGCTTTCC		85	4	0.05	124	1	0.0080645161		0	1	0	0				
CCDC173	129881	broad.mit.edu	37	2	170518895	170518895	+	Silent	SNP	T	T	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001085447	exon5	c.A714G	p.K238K	AGCATCTTTTTCT		143	4	0.03	148	0	0				0	0				
AOX1	316	broad.mit.edu;mdanderson.org	37	2	201467017	201467017	+	Silent	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	AOX1	NM_001159	exon6	c.C447T	p.C149C	CCTGTGCCGTTGC		109	5	0.05	138	0	0		152		0	0				
VSTM2L	128434	mdanderson.org	37	20	36560151	36560151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	VSTM2L,NS,carcinoma,0,1	VSTM2L	NM_080607	exon2	c.G236T	p.W79L	AGTGGTGGTATGT		26	3	0.12	44	0	0		0	1	0	0				
WISP2	8839	mdanderson.org	37	20	43348565	43348565	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_003881	exon2	c.T88A	p.C30S	ACACCATGTACCT		39	3	0.08	75	0	0				0	0				
ZNF217	7764	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	20	52194891	52194891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_006526	exon2	c.C1465T	p.H489Y	TGAGATGAATATT		471	39	0.08	548	0	0				8	1	0.13			
RRP1	8568	ucsc.edu;bcgsc.ca	37	21	45222243	45222243	+	Silent	SNP	T	T	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	RRP1	NM_003683	exon12	c.T1098A	p.R366R	GAAGCGTCTGCTC		42	4	0.10	80	0	0		23		245	0	0.00			
KRTAP10-10	353333	mdanderson.org	37	21	46058034	46058034	+	Missense_Mutation	SNP	G	G	A	rs1785472	by2hit2allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_181688	exon1	c.G700A	p.V234M	CGCCCCGTGTGCT		62	4	0.06	85	0	0				0	0				
CACNA1I	8911	mdanderson.org	37	22	40061521	40061521	+	Silent	SNP	G	G	T	rs374991740	alternate_allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	CACNA1I_ENST00000402142,NS,carcinoma,+1,2	CACNA1I_ENST00000402142	NM_021096	exon22	c.G3870T	p.P1290P	GGCGCCGGGCCTG		51	3	0.06	66	0	0		1	2	0	0				
PTPRG	5793	mdanderson.org	37	3	62263331	62263331	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_002841	exon26	c.A3742T	p.M1248L	ATTGTCATGCTGC		30	3	0.10	27	0	0				1	0	0.00			
COPG1	22820	mdanderson.org	37	3	128982812	128982812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_016128	exon13	c.G1194T	p.M398I	CCTTATGAACTTC		73	4	0.05	95	0	0				10	0	0.00			
GPR125	166647	mdanderson.org	37	4	22404358	22404358	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_145290	exon15	c.C2297A	p.T766N	ATAGCGGTAGTAT		60	4	0.07	77	0	0				4	0	0.00			
N4BP2	55728	mdanderson.org	37	4	40122253	40122253	+	Missense_Mutation	SNP	G	G	T	rs149362796	bycluster;byfrequency;alternate_allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_018177	exon9	c.G2522T	p.R841L	AGCAACGAGGATC		89	4	0.04	95	0	0				0	0				
KIT	3815	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	55593661	55593661	+	Missense_Mutation	SNP	T	T	C	rs121913513		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	KIT,NS,malignant_melanoma,0,86	KIT	NM_000222	exon11	c.T1727C	p.L576P	CACAACTTCCTTA		92	5	0.05	104	0	0		0	86	3	2	0.67			
.	0	broad.mit.edu	37	4	66960408	66960411	+	RNA	DEL	AAAT	AAAT	-	rs142153899	bycluster;by1000genomes;alternate_allele	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	AAAT	AAAT					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	GGTAAAAAATAAA		12	4	0.33	4	0	0				3	0	0.00			
TLR2	7097	mdanderson.org	37	4	154625737	154625737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_003264	exon3	c.G1678A	p.A560T	TGGCCAGCAAATT		47	4	0.09	87	0	0				13	0	0.00			
TMEM174	134288	broad.mit.edu	37	5	72469939	72469939	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	TMEM174	NM_153217	exon2	c.T679C	p.C227R	GAGGCCTGTGCCT		124	3	0.02	136	0	0		22		0	0				
DIAPH1	1729	mdanderson.org	37	5	140953625	140953625	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_005219	exon16	c.C1792A	p.P598T	GTGGTGGTGGAAT		39	3	0.08	52	0	0				12	0	0.00			
DBN1	1627	mdanderson.org	37	5	176885163	176885163	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_080881	exon13	c.C1678A	p.Q560K	GGGTCTGGGGGGC		78	4	0.05	109	0	0				225	0	0.00			
PMS2P4	0	broad.mit.edu	37	7	66767610	66767611	+	RNA	INS	-	-	G	rs71293166	bycluster	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	-	-					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	GGACTGCTTTTTT		13	4	0.31	9	0	0				0	0				
TYW1B	441250	broad.mit.edu	37	7	72093938	72093938	+	RNA	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	GTCCACGTTCCAT		74	4	0.05	82	0	0				2	0	0.00			
TRRAP	8295	mdanderson.org	37	7	98507792	98507792	+	Silent	SNP	C	C	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_003496	exon15	c.C1464A	p.P488P	GGTGCCCACTGCC		41	3	0.07	49	0	0				1	0	0.00			
MUC17	140453	hgsc.bcm.edu	37	7	100682117	100682117	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	MUC17,right_upper_lobe,carcinoma,-2,1	MUC17	NM_001040105	exon3	c.G7420A	p.G2474S	GAGGCTGGCACCC		99	5	0.05	125	1	0.008		-2	1	0	0				
EN2	2020	mdanderson.org	37	7	155251298	155251298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001427	exon1	c.C226T	p.R76W	ATCCTGCGGCCCG		30	3	0.10	39	0	0				0	0				
NPM2	10361	mdanderson.org	37	8	21891643	21891643	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_182795	exon6	c.G388T	p.E130X	TGGGAGGAGGAGG		41	3	0.07	54	0	0				1	0	0.00			
PCMTD1	115294	bcgsc.ca	37	8	52733143	52733143	+	Missense_Mutation	SNP	A	A	G	rs111785933	bycluster	TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	PCMTD1	NM_052937	exon6	c.T842C	p.V281A	TGTTTAACTCTCT		158	8	0.05	156	3	0.0192307692		73		54	0	0.00			
LY6E	4061	ucsc.edu	37	8	144103183	144103183	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic		RNA-Seq	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	LY6E	NM_002346	exon4	c.G373A	p.A125T	CTGCCGGCCCTGC		36	2	0.06	46	0	0		10		137	24	0.18			
GSDMD	79792	mdanderson.org	37	8	144643588	144643588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001166237	exon9	c.C731T	p.A244V	CACCCGCGACAGG		41	3	0.07	46	0	0				117	0	0.00			
CNTLN	54875	mdanderson.org	37	9	17135090	17135090	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_017738	exon1	c.G27A	p.P9P	CTCACCGCACCCT		12	2	0.17	21	0	0				0	0				
LCN10	414332	mdanderson.org	37	9	139635320	139635320	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_001001712	exon4	c.C443T	p.A148V	TGGGTTGCACGCC		34	3	0.09	41	0	0				2	0	0.00			
RNR2	6053	hgsc.bcm.edu;broad.mit.edu	37	MT	2333	2333	+	RNA	SNP	G	G	A	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	.	.	.	.	TCCTCCGCATAAG		31	10	0.32	11	0	0				0	0				
MAGEE2	139599	mdanderson.org	37	X	75004549	75004549	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZM-AA0E-01A-12D-A435-10	TCGA-ZM-AA0E-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	dbb79a24-d11f-4205-b2b6-a9cd8d31a869	22c71019-10f2-4bec-b3a6-2640f303435e	.	.	NM_138703	exon1	c.A338G	p.E113G	AGCATCTCGGACT		54	3	0.06	68	0	0				0	0				
