Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ACVR2A	92	genome.wustl.edu	37	2	148674936	148674937	+	Frame_Shift_Ins	INS	-	-	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	2	148674936	148674937	-	A	INS	ACVR2A	ENST00000241416	human	ensembl	70_37	+1	known	frame_shift_ins	c.757_758	p.R255fs	1.000:1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt	-	no_errors	ACVR2A	HGNC
ADAM21	8747	genome.wustl.edu	37	14	70924696	70924696	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	14	70924696	70924696	G	A	SNP	ADAM21	ENST00000267499	human	ensembl	70_37	+1	known	silent	c.480	p.K160	0.001	NULL	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM21	HGNC
ADAM21	8747	genome.wustl.edu	37	14	70924697	70924697	+	Missense_Mutation	SNP	A	A	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	14	70924697	70924697	A	G	SNP	ADAM21	ENST00000267499	human	ensembl	70_37	+1	known	missense	c.481	p.I161V	0.001	NULL	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM21	HGNC
ADAMTS10	81794	genome.wustl.edu	37	19	8649845	8649845	+	Missense_Mutation	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	19	8649845	8649845	G	A	SNP	ADAMTS10	ENST00000270328	human	ensembl	70_37	-1	known	missense	c.3136	p.R1046W	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS10	HGNC
ANKK1	255239	genome.wustl.edu	37	11	113270974	113270974	+	Silent	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	11	113270974	113270974	C	T	SNP	ANKK1	ENST00000303941	human	ensembl	70_37	+1	known	silent	c.2283	p.A761	0.006	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_cat_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ANKK1	HGNC
ASCC2	84164	genome.wustl.edu	37	22	30189461	30189461	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	22	30189461	30189461	C	T	SNP	ASCC2	ENST00000307790	human	ensembl	70_37	-1	known	missense	c.1807	p.E603K	0.900	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC
ATRX	546	genome.wustl.edu	37	X	76778779	76778779	+	Missense_Mutation	SNP	G	G	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	X	76778779	76778779	G	T	SNP	ATRX	ENST00000373344	human	ensembl	70_37	-1	known	missense	c.6800	p.T2267N	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC
C10orf82	143379	genome.wustl.edu	37	10	118427793	118427793	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	10	118427793	118427793	G	A	SNP	C10orf82	ENST00000588184	human	ensembl	70_37	-1	known	silent	c.31	p.L11	0.011	NULL	NULL	-	no_errors	C10orf82	HGNC
CDK6	1021	genome.wustl.edu	37	7	92300823	92300823	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	7	92300823	92300823	G	A	SNP	CDK6	ENST00000265734	human	ensembl	70_37	-1	known	silent	c.564	p.P188	0.130	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK6	HGNC
CELP	1057	genome.wustl.edu	37	9	135962465	135962465	+	RNA	DEL	T	T	-			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	9	135962465	135962465	T	-	DEL	CELP	ENST00000411440	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CELP	HGNC
CNTN4-AS2	100873976	genome.wustl.edu	37	3	2185855	2185855	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	3	2185855	2185855	C	T	SNP	CNTN4-AS2	ENST00000447256	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CNTN4-AS2	HGNC
COL2A1	1280	genome.wustl.edu	37	12	48386683	48386683	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	12	48386683	48386683	C	T	SNP	COL2A1	ENST00000380518	human	ensembl	70_37	-1	known	missense	c.1001	p.R334Q	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL2A1	HGNC
CPAMD8	27151	genome.wustl.edu	37	19	17132955	17132955	+	Silent	SNP	C	C	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	19	17132955	17132955	C	G	SNP	CPAMD8	ENST00000443236	human	ensembl	70_37	-1	known	silent	c.270	p.A90	0.362	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Prot_inh_Kazal	-	no_errors	CPAMD8	HGNC
CRAMP1L	57585	genome.wustl.edu	37	16	1664952	1664952	+	Silent	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	16	1664952	1664952	C	T	SNP	CRAMP1L	ENST00000293925	human	ensembl	70_37	+1	known	silent	c.312	p.S104	0.962	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	CRAMP1L	HGNC
CTNNA2	1496	genome.wustl.edu	37	2	80540713	80540713	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	2	80540713	80540713	G	A	SNP	CTNNA2	ENST00000343114	human	ensembl	70_37	+1	putative	silent	c.27	p.Q9	0.000	NULL	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC
CYP2A6	1548	genome.wustl.edu	37	19	41354661	41354661	+	Silent	SNP	T	T	C			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	19	41354661	41354661	T	C	SNP	CYP2A6	ENST00000301141	human	ensembl	70_37	-1	known	silent	c.351	p.V117	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A6	HGNC
CYP4F12	66002	genome.wustl.edu	37	19	15806798	15806798	+	Missense_Mutation	SNP	A	A	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	19	15806798	15806798	A	T	SNP	CYP4F12	ENST00000324632	human	ensembl	70_37	+1	known	missense	c.1168	p.R390W	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F12	HGNC
DCAF10	79269	genome.wustl.edu	37	9	37863321	37863321	+	RNA	SNP	T	T	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	9	37863321	37863321	T	A	SNP	DCAF10	ENST00000483167	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	DCAF10	HGNC
DLGAP1-AS5	284215	genome.wustl.edu	37	18	4264667	4264667	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	18	4264667	4264667	G	A	SNP	DLGAP1-AS5	ENST00000565759	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DLGAP1-AS5	HGNC
DNAH5	1767	genome.wustl.edu	37	5	13868103	13868104	+	Splice_Site	INS	-	-	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	5	13868103	13868104	-	A	INS	DNAH5	ENST00000265104	human	ensembl	70_37	-1	known	splice_site_ins	c.3835-3_3835-2	e25-2	0.997:0.001	-	-	-	no_errors	DNAH5	HGNC
DNM1P46	196968	genome.wustl.edu	37	15	100340349	100340349	+	RNA	SNP	C	C	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	15	100340349	100340349	C	A	SNP	DNM1P46	ENST00000341853	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P46	HGNC
DPY19L2P1	554236	genome.wustl.edu	37	7	35120233	35120233	+	RNA	SNP	A	A	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	7	35120233	35120233	A	T	SNP	DPY19L2P1	ENST00000458672	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DPY19L2P1	HGNC
ENSG00000206845	0	genome.wustl.edu	37	5	164362180	164362180	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	5	164362180	164362180	C	T	SNP	ENSG00000206845	ENST00000384118	human	ensembl	70_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	U6	RFAM
ENSG00000207320	0	genome.wustl.edu	37	X	3559500	3559500	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	X	3559500	3559500	G	A	SNP	ENSG00000207320	ENST00000384590	human	ensembl	70_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	Y_RNA	RFAM
ENSG00000229607	0	genome.wustl.edu	37	1	31283553	31283553	+	RNA	SNP	T	T	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	1	31283553	31283553	T	G	SNP	ENSG00000229607	ENST00000440358	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-1125N11.1	Clone_based_vega_gene
ENSG00000230839	0	genome.wustl.edu	37	20	1791852	1791852	+	RNA	SNP	C	C	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	20	1791852	1791852	C	A	SNP	ENSG00000230839	ENST00000447206	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-968J1.1	Clone_based_vega_gene
ENSG00000233723	0	genome.wustl.edu	37	2	59290199	59290199	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	2	59290199	59290199	G	A	SNP	ENSG00000233723	ENST00000452840	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.147	-	-	-	no_errors	AC007092.1	Clone_based_vega_gene
ENSG00000235994	0	genome.wustl.edu	37	6	168376967	168376968	+	RNA	INS	-	-	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	6	168376967	168376968	-	G	INS	ENSG00000235994	ENST00000538528	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.009:0.005	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene
ENSG00000235994	0	genome.wustl.edu	37	6	168376968	168376969	+	RNA	INS	-	-	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	6	168376968	168376969	-	G	INS	ENSG00000235994	ENST00000538528	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.005:0.007	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene
ENSG00000236837	0	genome.wustl.edu	37	2	52725890	52725890	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	2	52725890	52725890	C	T	SNP	ENSG00000236837	ENST00000443926	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC139712.4	Clone_based_vega_gene
ENSG00000238261	0	genome.wustl.edu	37	1	143399181	143399181	+	RNA	SNP	T	T	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	1	143399181	143399181	T	G	SNP	ENSG00000238261	ENST00000458155	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BX004987.5	Clone_based_vega_gene
ENSG00000238261	0	genome.wustl.edu	37	1	143401698	143401698	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	1	143401698	143401698	C	T	SNP	ENSG00000238261	ENST00000433980	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.824	-	-	-	no_errors	BX004987.5	Clone_based_vega_gene
ENSG00000249341	0	genome.wustl.edu	37	4	54603064	54603064	+	RNA	SNP	A	A	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	4	54603064	54603064	A	T	SNP	ENSG00000249341	ENST00000508112	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	RP11-317M11.1	Clone_based_vega_gene
ENSG00000252996	0	genome.wustl.edu	37	12	3063425	3063425	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	12	3063425	3063425	C	T	SNP	ENSG00000252996	ENST00000517187	human	ensembl	70_37	-1	novel	rna	NULL	NULL	0.049	-	-	-	no_errors	U6	RFAM
ENSG00000253854	0	genome.wustl.edu	37	8	94733096	94733097	+	RNA	INS	-	-	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	8	94733096	94733097	-	A	INS	ENSG00000253854	ENST00000520562	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.014:0.000	-	-	-	no_errors	RP11-10N23.2	Clone_based_vega_gene
ENSG00000254278	0	genome.wustl.edu	37	8	120080181	120080181	+	RNA	SNP	A	A	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	8	120080181	120080181	A	G	SNP	ENSG00000254278	ENST00000518362	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-278I4.2	Clone_based_vega_gene
ENSG00000255258	0	genome.wustl.edu	37	11	133654041	133654041	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	11	133654041	133654041	C	T	SNP	ENSG00000255258	ENST00000526254	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-448P19.1	Clone_based_vega_gene
ENSG00000259895	0	genome.wustl.edu	37	16	2515189	2515189	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	16	2515189	2515189	C	T	SNP	ENSG00000259895	ENST00000563775	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.054	-	-	-	no_errors	RP11-715J22.2	Clone_based_vega_gene
ENSG00000262223	0	genome.wustl.edu	37	17	79349960	79349960	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	17	79349960	79349960	C	T	SNP	ENSG00000262223	ENST00000570301	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	RP11-1055B8.3	Clone_based_vega_gene
ENSG00000266051	0	genome.wustl.edu	37	17	56533492	56533492	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	17	56533492	56533492	G	A	SNP	ENSG00000266051	ENST00000581197	human	ensembl	70_37	-1	novel	rna	NULL	NULL	0.008	-	-	-	no_errors	AC023992.1	Clone_based_ensembl_gene
FAM115C	285966	genome.wustl.edu	37	7	143417362	143417362	+	Missense_Mutation	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	7	143417362	143417362	G	A	SNP	FAM115C	ENST00000441159	human	ensembl	70_37	+1	known	missense	c.1210	p.V404I	0.006	NULL	NULL	-	no_errors	FAM115C	HGNC
FAM225B	100128385	genome.wustl.edu	37	9	115867593	115867593	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	9	115867593	115867593	C	T	SNP	FAM225B	ENST00000423546	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	FAM225B	HGNC
FBXW7	55294	genome.wustl.edu	37	4	153249384	153249384	+	Missense_Mutation	SNP	C	C	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	4	153249384	153249384	C	A	SNP	FBXW7	ENST00000281708	human	ensembl	70_37	-1	known	missense	c.1394	p.R465L	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC
FGF20	26281	genome.wustl.edu	37	8	16859521	16859521	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	8	16859521	16859521	G	A	SNP	FGF20	ENST00000180166	human	ensembl	70_37	-1	known	silent	c.21	p.V7	0.997	NULL	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	-	no_errors	FGF20	HGNC
FLJ45832	400841	genome.wustl.edu	37	20	29516567	29516567	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	20	29516567	29516567	G	A	SNP	FLJ45832	ENST00000380888	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP4-610C12.4	Clone_based_vega_gene
GNPAT	8443	genome.wustl.edu	37	1	231402067	231402067	+	Silent	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	1	231402067	231402067	C	T	SNP	GNPAT	ENST00000366647	human	ensembl	70_37	+1	known	silent	c.969	p.S323	0.999	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	GNPAT	HGNC
KIAA0556	23247	genome.wustl.edu	37	16	27642395	27642395	+	Missense_Mutation	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	16	27642395	27642395	G	A	SNP	KIAA0556	ENST00000261588	human	ensembl	70_37	+1	known	missense	c.320	p.R107Q	0.298	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	12	25398284	25398284	C	T	SNP	KRAS	ENST00000256078	human	ensembl	70_37	-1	known	missense	c.35	p.G12D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC
LEPREL2	10536	genome.wustl.edu	37	12	6948853	6948853	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	12	6948853	6948853	G	A	SNP	LEPREL2	ENST00000251761	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LEPREL2	HGNC
LINC00652	29075	genome.wustl.edu	37	20	18772659	18772659	+	RNA	SNP	A	A	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	20	18772659	18772659	A	G	SNP	LINC00652	ENST00000454749	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00652	HGNC
LOC100505978	100505978	genome.wustl.edu	37	12	107074753	107074753	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	12	107074753	107074753	C	T	SNP	LOC100505978	ENST00000547531	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-482D24.2	Clone_based_vega_gene
LOC100506303	100506303	genome.wustl.edu	37	14	19692764	19692764	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	14	19692764	19692764	C	T	SNP	LOC100506303	ENST00000431094	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	AL589743.1	Clone_based_vega_gene
MICAL3	57553	genome.wustl.edu	37	22	18359611	18359611	+	RNA	SNP	T	T	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	22	18359611	18359611	T	G	SNP	MICAL3	ENST00000465886	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	MICAL3	HGNC
MT1H	4496	genome.wustl.edu	37	16	56704434	56704434	+	Silent	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	16	56704434	56704434	C	T	SNP	MT1H	ENST00000332374	human	ensembl	70_37	+1	known	silent	c.45	p.C15	0.053	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	-	no_errors	MT1H	HGNC
MYH1	4619	genome.wustl.edu	37	17	10404045	10404045	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	17	10404045	10404045	C	T	SNP	MYH1	ENST00000226207	human	ensembl	70_37	-1	known	missense	c.3763	p.A1255T	0.905	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC
NEAT1	283131	genome.wustl.edu	37	11	65199970	65199970	+	RNA	SNP	T	T	C			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	11	65199970	65199970	T	C	SNP	NEAT1	ENST00000501122	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	NEAT1	HGNC
OTOF	9381	genome.wustl.edu	37	2	26680943	26680943	+	Missense_Mutation	SNP	G	G	C			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	2	26680943	26680943	G	C	SNP	OTOF	ENST00000339598	human	ensembl	70_37	-1	known	missense	c.3658	p.P1220A	1.000	NULL	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,prints_C2_dom,pfscan_C2_membr_targeting	-	no_errors	OTOF	HGNC
PPL	5493	genome.wustl.edu	37	16	4949362	4949362	+	Missense_Mutation	SNP	C	C	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	16	4949362	4949362	C	A	SNP	PPL	ENST00000345988	human	ensembl	70_37	-1	known	missense	c.630	p.Q210H	1.000	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC
PRKD1	5587	genome.wustl.edu	37	14	30066911	30066911	+	Silent	SNP	C	C	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	14	30066911	30066911	C	A	SNP	PRKD1	ENST00000331968	human	ensembl	70_37	-1	known	silent	c.2220	p.R740	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC
PROCR	10544	genome.wustl.edu	37	20	33762727	33762727	+	Missense_Mutation	SNP	G	G	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	20	33762727	33762727	G	T	SNP	PROCR	ENST00000216968	human	ensembl	70_37	+1	known	missense	c.293	p.R98L	0.004	superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	PROCR	HGNC
SH3GLB1	51100	genome.wustl.edu	37	1	87188292	87188292	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	1	87188292	87188292	C	T	SNP	SH3GLB1	ENST00000482504	human	ensembl	70_37	+1	known	missense	c.413	p.T138M	1.000	pfam_BAR_dom,pfam_BAR_dom-cont,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_BAR_dom-cont,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain	-	no_errors	SH3GLB1	HGNC
STOX2	56977	genome.wustl.edu	37	4	184930517	184930517	+	Missense_Mutation	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	4	184930517	184930517	G	A	SNP	STOX2	ENST00000308497	human	ensembl	70_37	+1	known	missense	c.526	p.G176R	1.000	NULL	pfam_Storkhead-box_winged-helix	-	no_errors	STOX2	HGNC
SYCP2	10388	genome.wustl.edu	37	20	58496531	58496531	+	RNA	SNP	A	A	G			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	20	58496531	58496531	A	G	SNP	SYCP2	ENST00000476314	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.072	-	-	-	no_errors	SYCP2	HGNC
SYNGR2	9144	genome.wustl.edu	37	17	76167900	76167900	+	Missense_Mutation	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	17	76167900	76167900	G	A	SNP	SYNGR2	ENST00000588282	human	ensembl	70_37	+1	putative	missense	c.647	p.R216Q	0.000	NULL	pfam_MARVEL-like_dom	-	no_errors	SYNGR2	HGNC
TOM1	10043	genome.wustl.edu	37	22	35719764	35719764	+	Missense_Mutation	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	22	35719764	35719764	G	A	SNP	TOM1	ENST00000411850	human	ensembl	70_37	+1	known	missense	c.505	p.V169M	0.648	pirsf_TOM1	pfam_VHS,pfam_GAT,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_GAT,pfscan_VHS	-	no_errors	TOM1	HGNC
TRHDE	29953	genome.wustl.edu	37	12	73012759	73012759	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	12	73012759	73012759	C	T	SNP	TRHDE	ENST00000261180	human	ensembl	70_37	+1	known	nonsense	c.2275	p.R759*	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC
TRPC5OS	100329135	genome.wustl.edu	37	X	111145031	111145031	+	RNA	SNP	G	G	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	X	111145031	111145031	G	T	SNP	TRPC5OS	ENST00000371970	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	TRPC5OS	HGNC
TRRAP	8295	genome.wustl.edu	37	7	98529255	98529255	+	Missense_Mutation	SNP	G	G	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	7	98529255	98529255	G	T	SNP	TRRAP	ENST00000359863	human	ensembl	70_37	+1	known	missense	c.3819	p.K1273N	0.998	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC
TXNL1	9352	genome.wustl.edu	37	18	54266502	54266502	+	RNA	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	18	54266502	54266502	G	A	SNP	TXNL1	ENST00000585497	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TXNL1	HGNC
UNC5D	137970	genome.wustl.edu	37	8	35624428	35624428	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	8	35624428	35624428	G	A	SNP	UNC5D	ENST00000404895	human	ensembl	70_37	+1	known	silent	c.2322	p.P774	0.009	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death,pfam_Immunoglobulin,superfamily_DEATH-like,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like	-	no_errors	UNC5D	HGNC
VRTN	55237	genome.wustl.edu	37	14	74824923	74824923	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	14	74824923	74824923	G	A	SNP	VRTN	ENST00000256362	human	ensembl	70_37	+1	known	silent	c.1437	p.A479	0.000	NULL	pfam_Transposase_8	-	no_errors	VRTN	HGNC
WDR52	55779	genome.wustl.edu	37	3	113120479	113120479	+	Silent	SNP	G	G	A			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	3	113120479	113120479	G	A	SNP	WDR52	ENST00000393845	human	ensembl	70_37	-1	known	silent	c.1278	p.F426	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC
WHSC1	7468	genome.wustl.edu	37	4	1980533	1980533	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	4	1980533	1980533	C	T	SNP	WHSC1	ENST00000382891	human	ensembl	70_37	+1	known	missense	c.3995	p.S1332L	0.011	NULL	pfam_PWWP,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_superfamily,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_PWWP,smart_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_superfamily	-	no_errors	WHSC1	HGNC
WHSC1L1	54904	genome.wustl.edu	37	8	38174709	38174709	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	8	38174709	38174709	C	T	SNP	WHSC1L1	ENST00000525081	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.943	-	-	-	no_errors	WHSC1L1	HGNC
XPO1	7514	genome.wustl.edu	37	2	61711217	61711217	+	Missense_Mutation	SNP	A	A	C			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	2	61711217	61711217	A	C	SNP	XPO1	ENST00000401558	human	ensembl	70_37	-1	known	missense	c.2532	p.H844Q	1.000	pfam_CRM1_C_dom,superfamily_ARM-type_fold	pfam_CRM1_C_dom,pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO1	HGNC
ZCCHC2	54877	genome.wustl.edu	37	18	60190786	60190787	+	In_Frame_Ins	INS	-	-	CCG			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	18	60190786	60190787	-	CCG	INS	ZCCHC2	ENST00000269499	human	ensembl	70_37	+1	known	in_frame_ins	c.129_130	p.47in_frame_insP	0.978:0.996	NULL	pfam_Znf_CCHC,superfamily_Phox,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC2	HGNC
ZNF264	9422	genome.wustl.edu	37	19	57724021	57724021	+	Missense_Mutation	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	19	57724021	57724021	C	T	SNP	ZNF264	ENST00000263095	human	ensembl	70_37	+1	known	missense	c.1556	p.S519L	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF264	HGNC
ZNF496	84838	genome.wustl.edu	37	1	247471184	247471184	+	RNA	SNP	C	C	T			TCGA-EK-A2RL-01A-11D-A18J-09	TCGA-EK-A2RL-10A-01D-A18J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fda5878e-5f0c-4447-9169-48865e7c3779	6ef4b38a-ded9-4d85-bdf4-bdfa495e235a	1	247471184	247471184	C	T	SNP	ZNF496	ENST00000465126	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	ZNF496	HGNC
