Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
AHDC1	27245	genome.wustl.edu	37	1	27861171	27861172	+	RNA	INS	-	-	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	27861171	27861172	-	T	INS	AHDC1	ENST00000482400	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.974:0.982	-	-	-	no_errors	AHDC1	HGNC
AMZ1	155185	genome.wustl.edu	37	7	2740156	2740156	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	7	2740156	2740156	C	T	SNP	AMZ1	ENST00000312371	human	ensembl	70_37	+1	known	missense	c.71	p.T24I	0.048	NULL	pfam_Pept_M54_archaemetzincn	-	no_errors	AMZ1	HGNC
ANKHD1	54882	genome.wustl.edu	37	5	139838931	139838931	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	5	139838931	139838931	C	T	SNP	ANKHD1	ENST00000297183	human	ensembl	70_37	+1	known	silent	c.1663	p.L555	0.985	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKHD1	HGNC
ARHGEF33	100271715	genome.wustl.edu	37	2	39185251	39185251	+	Missense_Mutation	SNP	G	G	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	2	39185251	39185251	G	T	SNP	ARHGEF33	ENST00000398800	human	ensembl	70_37	+1	known	missense	c.1447	p.G483C	0.999	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_Prefoldin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF33	HGNC
ASPG	374569	genome.wustl.edu	37	14	104559921	104559921	+	Nonsense_Mutation	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	14	104559921	104559921	C	A	SNP	ASPG	ENST00000455920	human	ensembl	70_37	+1	known	nonsense	c.285	p.C95*	0.013	pfam_Asparaginase/glutaminase,superfamily_Asparaginase/glutaminase,smart_Asparaginase/glutaminase,tigrfam_AsnASEI	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC
B3GALT4	8705	genome.wustl.edu	37	6	33245262	33245262	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	33245262	33245262	C	T	SNP	B3GALT4	ENST00000451237	human	ensembl	70_37	+1	known	silent	c.66	p.L22	0.018	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALT4	HGNC
B4GALT7	11285	genome.wustl.edu	37	5	177031510	177031510	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	5	177031510	177031510	C	T	SNP	B4GALT7	ENST00000029410	human	ensembl	70_37	+1	known	silent	c.381	p.H127	1.000	pfam_Galactosyl_T_2_met	pfam_Galactosyl_T_2_met,prints_Galactosyl_T_2_met	-	no_errors	B4GALT7	HGNC
CA7	766	genome.wustl.edu	37	16	66881082	66881082	+	Missense_Mutation	SNP	A	A	G			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	16	66881082	66881082	A	G	SNP	CA7	ENST00000338437	human	ensembl	70_37	+1	known	missense	c.190	p.N64D	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA7	HGNC
CASK	8573	genome.wustl.edu	37	X	41481887	41481887	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	X	41481887	41481887	C	T	SNP	CASK	ENST00000378163	human	ensembl	70_37	-1	known	missense	c.1016	p.G339E	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Guanylate_kin,pfam_L27_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_L27,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Guanylate_kin	-	no_errors	CASK	HGNC
CBFB	865	genome.wustl.edu	37	16	67100636	67100636	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	16	67100636	67100636	G	A	SNP	CBFB	ENST00000290858	human	ensembl	70_37	+1	known	missense	c.334	p.G112S	1.000	pfam_CBF_beta,superfamily_CBF_beta	pfam_CBF_beta,superfamily_CBF_beta	-	no_errors	CBFB	HGNC
CBLC	23624	genome.wustl.edu	37	19	45295767	45295767	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	19	45295767	45295767	G	A	SNP	CBLC	ENST00000270279	human	ensembl	70_37	+1	known	nonsense	c.1133	p.W378*	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Adaptor_Cbl_N_hlx,pfam_Znf_C3HC4_RING-type,superfamily_Adaptor_Cbl_N_hlx,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	CBLC	HGNC
CD99	4267	genome.wustl.edu	37	X	2651449	2651449	+	RNA	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	X	2651449	2651449	G	A	SNP	CD99	ENST00000482405	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD99	HGNC
CDH7	1005	genome.wustl.edu	37	18	63511149	63511149	+	Silent	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	18	63511149	63511149	G	A	SNP	CDH7	ENST00000323011	human	ensembl	70_37	+1	known	silent	c.1083	p.T361	0.570	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC
CTBP2	1488	genome.wustl.edu	37	10	126714653	126714653	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	10	126714653	126714653	G	A	SNP	CTBP2	ENST00000309035	human	ensembl	70_37	-1	known	missense	c.1676	p.P559L	1.000	NULL	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	CTBP2	HGNC
DISP2	85455	genome.wustl.edu	37	15	40660964	40660964	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	15	40660964	40660964	C	T	SNP	DISP2	ENST00000267889	human	ensembl	70_37	+1	known	missense	c.2651	p.P884L	0.683	NULL	pfscan_SSD	-	no_errors	DISP2	HGNC
DNAH3	55567	genome.wustl.edu	37	16	20974746	20974746	+	Missense_Mutation	SNP	G	G	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	16	20974746	20974746	G	T	SNP	DNAH3	ENST00000261383	human	ensembl	70_37	-1	known	missense	c.10460	p.A3487E	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC
DNAH7	56171	genome.wustl.edu	37	2	196753575	196753575	+	Missense_Mutation	SNP	T	T	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	2	196753575	196753575	T	A	SNP	DNAH7	ENST00000312428	human	ensembl	70_37	-1	known	missense	c.5177	p.Q1726L	0.996	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_HAND_2	-	no_errors	DNAH7	HGNC
DYNC1H1	1778	genome.wustl.edu	37	14	102514296	102514296	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	14	102514296	102514296	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	70_37	+1	known	silent	c.13149	p.T4383	0.087	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC
EIF2B3	8891	genome.wustl.edu	37	1	45424469	45424469	+	RNA	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	45424469	45424469	C	T	SNP	EIF2B3	ENST00000487532	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EIF2B3	HGNC
ENSG00000221259	0	genome.wustl.edu	37	12	111511845	111511846	+	RNA	INS	-	-	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	12	111511845	111511846	-	A	INS	ENSG00000221259	ENST00000408332	human	ensembl	70_37	+1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC002978.1	Clone_based_ensembl_gene
ENSG00000234864	0	genome.wustl.edu	37	10	43201866	43201867	+	RNA	INS	-	-	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	10	43201866	43201867	-	T	INS	ENSG00000234864	ENST00000439913	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.844:0.852	-	-	-	no_errors	AL022344.5	Clone_based_vega_gene
ENSG00000248666	0	genome.wustl.edu	37	9	130457376	130457376	+	RNA	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	9	130457376	130457376	G	A	SNP	ENSG00000248666	ENST00000335223	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	RP11-56D16.2	Clone_based_vega_gene
ENSG00000259660	0	genome.wustl.edu	37	15	102294753	102294753	+	RNA	SNP	T	T	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	15	102294753	102294753	T	C	SNP	ENSG00000259660	ENST00000561463	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2611K5.6	Clone_based_vega_gene
EPHA2	1969	genome.wustl.edu	37	1	16464648	16464648	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	16464648	16464648	C	T	SNP	EPHA2	ENST00000358432	human	ensembl	70_37	-1	known	missense	c.1012	p.V338M	0.166	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA2	HGNC
EVX2	344191	genome.wustl.edu	37	2	176948343	176948343	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	2	176948343	176948343	C	T	SNP	EVX2	ENST00000308618	human	ensembl	70_37	-1	known	silent	c.162	p.P54	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Antifreeze_1,prints_Homeobox_metazoa	-	no_errors	EVX2	HGNC
EYA4	2070	genome.wustl.edu	37	6	133777755	133777755	+	Silent	SNP	A	A	G			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	133777755	133777755	A	G	SNP	EYA4	ENST00000355167	human	ensembl	70_37	+1	known	silent	c.339	p.G113	1.000	NULL	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC
FAM111A	63901	genome.wustl.edu	37	11	58920144	58920144	+	Missense_Mutation	SNP	G	G	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	58920144	58920144	G	T	SNP	FAM111A	ENST00000361723	human	ensembl	70_37	+1	known	missense	c.1003	p.G335W	0.793	superfamily_Pept_cys/ser_Trypsin-like	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like	-	no_errors	FAM111A	HGNC
FAM65B	9750	genome.wustl.edu	37	6	25042141	25042141	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	25042141	25042141	G	A	SNP	FAM65B	ENST00000510784	human	ensembl	70_37	-1	known	missense	c.14	p.S5L	0.467	NULL	NULL	-	no_errors	FAM65B	HGNC
FZD2	2535	genome.wustl.edu	37	17	42636381	42636381	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	17	42636381	42636381	G	A	SNP	FZD2	ENST00000315323	human	ensembl	70_37	+1	known	missense	c.1325	p.R442H	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC
GDF7	151449	genome.wustl.edu	37	2	20870986	20870986	+	Missense_Mutation	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	2	20870986	20870986	C	A	SNP	GDF7	ENST00000272224	human	ensembl	70_37	+1	known	missense	c.1154	p.P385H	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF7	HGNC
HERC4	26091	genome.wustl.edu	37	10	69716602	69716603	+	RNA	INS	-	-	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	10	69716602	69716603	-	A	INS	HERC4	ENST00000480158	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	HERC4	HGNC
HIST1H2BD	3017	genome.wustl.edu	37	6	26158407	26158407	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	26158407	26158407	C	T	SNP	HIST1H2BD	ENST00000289316	human	ensembl	70_37	+1	known	missense	c.10	p.P4S	0.984	NULL	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BD	HGNC
HSP90AA1	3320	genome.wustl.edu	37	14	102552169	102552169	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	14	102552169	102552169	G	A	SNP	HSP90AA1	ENST00000334701	human	ensembl	70_37	-1	known	missense	c.821	p.T274I	1.000	pirsf_Hsp90,pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,smart_ATPase-like_ATP-bd,prints_Hsp90_N	pirsf_Hsp90,pfam_Hsp90,pfam_ATPase-like_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ATPase-like_ATP-bd,smart_ATPase-like_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC
IPO5	3843	genome.wustl.edu	37	13	98652882	98652882	+	Missense_Mutation	SNP	T	T	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	13	98652882	98652882	T	C	SNP	IPO5	ENST00000261574	human	ensembl	70_37	+1	known	missense	c.1145	p.M382T	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N	-	no_errors	IPO5	HGNC
IQCJ-SCHIP1	100505385	genome.wustl.edu	37	3	159482297	159482297	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	3	159482297	159482297	C	T	SNP	IQCJ-SCHIP1	ENST00000485419	human	ensembl	70_37	+1	known	silent	c.357	p.A119	1.000	NULL	pfam_SCHIP_1	-	no_errors	IQCJ-SCHIP1	HGNC
ITGA9	3680	genome.wustl.edu	37	3	37792021	37792021	+	Silent	SNP	A	A	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	3	37792021	37792021	A	T	SNP	ITGA9	ENST00000264741	human	ensembl	70_37	+1	known	silent	c.2502	p.S834	0.034	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA9	HGNC
ITGB4	3691	genome.wustl.edu	37	17	73751271	73751271	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	17	73751271	73751271	C	T	SNP	ITGB4	ENST00000339591	human	ensembl	70_37	+1	known	missense	c.4484	p.P1495L	0.995	pirsf_Integrin_bsu-4	pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,pirsf_Integrin_bsu-4,pfscan_Fibronectin_type3,prints_Integrin_bsu	-	no_errors	ITGB4	HGNC
KIAA1804	84451	genome.wustl.edu	37	1	233482309	233482309	+	Silent	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	233482309	233482309	C	A	SNP	KIAA1804	ENST00000366624	human	ensembl	70_37	+1	known	silent	c.927	p.A309	0.991	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom	-	no_errors	MLK4	Uniprot_genename
KIF25-AS1	100505879	genome.wustl.edu	37	6	168396931	168396931	+	RNA	SNP	A	A	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	168396931	168396931	A	T	SNP	KIF25-AS1	ENST00000414364	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIF25-AS1	HGNC
KRTAP20-1	337975	genome.wustl.edu	37	21	31988847	31988847	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	21	31988847	31988847	G	A	SNP	KRTAP20-1	ENST00000334664	human	ensembl	70_37	+1	known	missense	c.74	p.R25H	0.006	pfam_KRTAP	pfam_KRTAP	-	no_errors	KRTAP20-1	HGNC
LATS1	9113	genome.wustl.edu	37	6	149997697	149997697	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	149997697	149997697	G	A	SNP	LATS1	ENST00000253339	human	ensembl	70_37	-1	known	nonsense	c.2770	p.R924*	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_UBA/transl_elong_EF1B_N,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_cat_dom	-	no_errors	LATS1	HGNC
LDLRAD3	143458	genome.wustl.edu	37	11	36057766	36057766	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	36057766	36057766	G	A	SNP	LDLRAD3	ENST00000315571	human	ensembl	70_37	+1	known	missense	c.160	p.D54N	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	-	no_errors	LDLRAD3	HGNC
LHX2	9355	genome.wustl.edu	37	9	126795395	126795396	+	RNA	INS	-	-	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	9	126795395	126795396	-	A	INS	LHX2	ENST00000488674	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.992:0.989	-	-	-	no_errors	LHX2	HGNC
LOC642423	642423	genome.wustl.edu	37	15	84868725	84868726	+	RNA	DEL	GG	GG	-			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	15	84868725	84868726	GG	-	DEL	LOC642423	ENST00000316967	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.187:0.139	-	-	-	no_errors	AC103965.1	Clone_based_vega_gene
LRRC55	219527	genome.wustl.edu	37	11	56949718	56949718	+	Missense_Mutation	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	56949718	56949718	C	A	SNP	LRRC55	ENST00000497933	human	ensembl	70_37	+1	known	missense	c.351	p.H117Q	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC55	HGNC
LRRC55	219527	genome.wustl.edu	37	11	56949719	56949719	+	Missense_Mutation	SNP	A	A	G			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	56949719	56949719	A	G	SNP	LRRC55	ENST00000497933	human	ensembl	70_37	+1	known	missense	c.352	p.N118D	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC55	HGNC
LINC00948	100507027	genome.wustl.edu	37	10	61496870	61496870	+	RNA	SNP	A	A	G			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	10	61496870	61496870	A	G	SNP	M1	ENST00000414264	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	RP11-59J5.1	Clone_based_vega_gene
MEF2A	4205	genome.wustl.edu	37	15	100211754	100211754	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	15	100211754	100211754	C	T	SNP	MEF2A	ENST00000354410	human	ensembl	70_37	+1	known	silent	c.288	p.C96	1.000	pfam_HJURP_C	pfam_HJURP_C,pfam_TF_MADSbox,superfamily_TF_MADSbox,smart_TF_MADSbox,pfscan_TF_MADSbox,prints_TF_MADSbox	-	no_errors	MEF2A	HGNC
MTMR3	8897	genome.wustl.edu	37	22	30415898	30415898	+	Silent	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	22	30415898	30415898	G	A	SNP	MTMR3	ENST00000401950	human	ensembl	70_37	+1	known	silent	c.2250	p.L750	0.001	NULL	pfam_Myotub-related,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC
MUC6	4588	genome.wustl.edu	37	11	1017591	1017591	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	1017591	1017591	C	T	SNP	MUC6	ENST00000421673	human	ensembl	70_37	-1	known	missense	c.5210	p.R1737Q	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC
MUC7	4589	genome.wustl.edu	37	4	71346991	71346991	+	Missense_Mutation	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	4	71346991	71346991	C	A	SNP	MUC7	ENST00000304887	human	ensembl	70_37	+1	known	missense	c.530	p.P177Q	0.009	NULL	NULL	-	no_errors	MUC7	HGNC
OR8B4	283162	genome.wustl.edu	37	11	124293926	124293926	+	Missense_Mutation	SNP	A	A	G			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	124293926	124293926	A	G	SNP	OR8B4	ENST00000356130	human	ensembl	70_37	-1	putative	missense	c.842	p.V281A	0.478	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B4	HGNC
PIR	8544	genome.wustl.edu	37	X	15444055	15444055	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	X	15444055	15444055	G	A	SNP	PIR	ENST00000380420	human	ensembl	70_37	-1	known	missense	c.539	p.A180V	1.000	pfam_Pirin_C_dom,superfamily_RmlC_Cupin,pirsf_Pirin	pfam_Pirin_C_dom,pfam_Pirin_N_dom,superfamily_RmlC_Cupin,pirsf_Pirin	-	no_errors	PIR	HGNC
PLCD4	84812	genome.wustl.edu	37	2	219499242	219499242	+	Silent	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	2	219499242	219499242	G	A	SNP	PLCD4	ENST00000417849	human	ensembl	70_37	+1	known	silent	c.1785	p.Q595	1.000	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_EF_hand_Ca-bd,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pfscan_EF_HAND_2,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD4	HGNC
PPM1F	9647	genome.wustl.edu	37	22	22280022	22280022	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	22	22280022	22280022	C	T	SNP	PPM1F	ENST00000263212	human	ensembl	70_37	-1	known	missense	c.905	p.R302H	1.000	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1F	HGNC
PPP1R13L	10848	genome.wustl.edu	37	19	45895174	45895174	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	19	45895174	45895174	C	T	SNP	PPP1R13L	ENST00000360957	human	ensembl	70_37	-1	known	silent	c.1779	p.P593	0.000	superfamily_SH3_domain	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13L	HGNC
PRKG2	5593	genome.wustl.edu	37	4	82126091	82126091	+	Missense_Mutation	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	4	82126091	82126091	C	A	SNP	PRKG2	ENST00000264399	human	ensembl	70_37	-1	known	missense	c.111	p.L37F	1.000	pirsf_cGMP-dependent_protein_kinase	pfam_Prot_kinase_cat_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_cat_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC
QTRTD1	79691	genome.wustl.edu	37	3	113798754	113798754	+	Missense_Mutation	SNP	C	C	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	3	113798754	113798754	C	A	SNP	QTRTD1	ENST00000281273	human	ensembl	70_37	+1	known	missense	c.748	p.L250I	1.000	pfam_tRNA_ribo_trans,superfamily_tRNA_ribo_trans,tigrfam_tRNA_ribo_trans	pfam_tRNA_ribo_trans,superfamily_tRNA_ribo_trans,tigrfam_tRNA_ribo_trans	-	no_errors	QTRTD1	HGNC
RBM25	58517	genome.wustl.edu	37	14	73578379	73578379	+	Missense_Mutation	SNP	G	G	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	14	73578379	73578379	G	C	SNP	RBM25	ENST00000261973	human	ensembl	70_37	+1	known	missense	c.2161	p.D721H	1.000	NULL	pfam_PWI,pfam_RRM_dom,superfamily_PWI,smart_RRM_dom,smart_PWI,pfscan_RRM_dom	-	no_errors	RBM25	HGNC
SATL1	340562	genome.wustl.edu	37	X	84362391	84362391	+	Silent	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	X	84362391	84362391	G	A	SNP	SATL1	ENST00000509231	human	ensembl	70_37	-1	known	silent	c.1584	p.Y528	0.003	superfamily_Acyl_CoA_acyltransferase	superfamily_Acyl_CoA_acyltransferase	-	no_errors	SATL1	HGNC
SECISBP2	79048	genome.wustl.edu	37	9	91964815	91964815	+	Missense_Mutation	SNP	C	C	G			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	9	91964815	91964815	C	G	SNP	SECISBP2	ENST00000375807	human	ensembl	70_37	+1	known	missense	c.1863	p.F621L	0.429	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2	HGNC
SLC22A6	9356	genome.wustl.edu	37	11	62747277	62747277	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	11	62747277	62747277	C	T	SNP	SLC22A6	ENST00000377871	human	ensembl	70_37	-1	known	missense	c.1181	p.R394H	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A6	HGNC
SLC9A1	6548	genome.wustl.edu	37	1	27440643	27440643	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	27440643	27440643	G	A	SNP	SLC9A1	ENST00000263980	human	ensembl	70_37	-1	known	missense	c.487	p.L163F	1.000	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_1,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A1	HGNC
SLCO6A1	133482	genome.wustl.edu	37	5	101834431	101834431	+	Missense_Mutation	SNP	T	T	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	5	101834431	101834431	T	C	SNP	SLCO6A1	ENST00000379807	human	ensembl	70_37	-1	known	missense	c.118	p.K40E	0.000	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal-type_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO6A1	HGNC
SRSF1	6426	genome.wustl.edu	37	17	56083298	56083298	+	Missense_Mutation	SNP	T	T	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	17	56083298	56083298	T	C	SNP	SRSF1	ENST00000258962	human	ensembl	70_37	-1	known	missense	c.416	p.D139G	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF1	HGNC
SRSF5	6430	genome.wustl.edu	37	14	70235906	70235906	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	14	70235906	70235906	C	T	SNP	SRSF5	ENST00000451983	human	ensembl	70_37	+1	known	missense	c.304	p.P102S	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF5	HGNC
ST6GALNAC3	256435	genome.wustl.edu	37	1	76779548	76779548	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	76779548	76779548	G	A	SNP	ST6GALNAC3	ENST00000328299	human	ensembl	70_37	+1	known	missense	c.77	p.R26H	1.000	NULL	pfam_Glyco_trans_29	-	no_errors	ST6GALNAC3	HGNC
TLR2	7097	genome.wustl.edu	37	4	154624095	154624095	+	Silent	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	4	154624095	154624095	G	A	SNP	TLR2	ENST00000260010	human	ensembl	70_37	+1	known	silent	c.36	p.G12	0.002	pirsf_Toll-like_receptor	pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pirsf_Toll-like_receptor,pfscan_TIR_dom,prints_IL1_rcpt_1	-	no_errors	TLR2	HGNC
TRIM16L	147166	genome.wustl.edu	37	17	18638256	18638256	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	17	18638256	18638256	G	A	SNP	TRIM16L	ENST00000395902	human	ensembl	70_37	+1	known	missense	c.692	p.R231H	1.000	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIM16L	HGNC
TRIO	7204	genome.wustl.edu	37	5	14461388	14461389	+	Frame_Shift_Ins	INS	-	-	CGGC			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	5	14461388	14461389	-	CGGC	INS	TRIO	ENST00000344204	human	ensembl	70_37	+1	known	frame_shift_ins	c.5464_5465	p.T1824fs	1.000:1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_cat_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	TRIO	HGNC
TTC33	23548	genome.wustl.edu	37	5	40728489	40728489	+	Silent	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	5	40728489	40728489	C	T	SNP	TTC33	ENST00000337702	human	ensembl	70_37	-1	known	silent	c.393	p.Q131	0.816	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC33	HGNC
UTRN	7402	genome.wustl.edu	37	6	145148812	145148812	+	Frame_Shift_Del	DEL	G	G	-			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	6	145148812	145148812	G	-	DEL	UTRN	ENST00000367545	human	ensembl	70_37	+1	known	frame_shift_del	c.9599	p.R3200fs	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC
VWA3B	200403	genome.wustl.edu	37	2	98779316	98779316	+	Missense_Mutation	SNP	G	G	A			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	2	98779316	98779316	G	A	SNP	VWA3B	ENST00000477737	human	ensembl	70_37	+1	known	missense	c.991	p.A331T	0.995	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC
WDR63	126820	genome.wustl.edu	37	1	85555822	85555822	+	Missense_Mutation	SNP	C	C	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	1	85555822	85555822	C	T	SNP	WDR63	ENST00000294664	human	ensembl	70_37	+1	known	missense	c.764	p.T255M	0.114	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR63	HGNC
ZNF417	147687	genome.wustl.edu	37	19	58420942	58420942	+	Missense_Mutation	SNP	G	G	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	19	58420942	58420942	G	C	SNP	ZNF417	ENST00000312026	human	ensembl	70_37	-1	known	missense	c.704	p.T235S	0.961	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF417	HGNC
ZNF784	147808	genome.wustl.edu	37	19	56133145	56133145	+	Missense_Mutation	SNP	G	G	T			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	19	56133145	56133145	G	T	SNP	ZNF784	ENST00000325351	human	ensembl	70_37	-1	known	missense	c.944	p.A315E	0.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF784	HGNC
ZNF891	101060200	genome.wustl.edu	37	12	133697995	133697995	+	Silent	SNP	T	T	C			TCGA-EX-A69M-01A-11D-A32I-09	TCGA-EX-A69M-10A-01D-A32I-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41b98960-ba0c-490d-b43d-75d8a1ff9e04	e6a488e7-6307-4b66-ab64-31b087b53e90	12	133697995	133697995	T	C	SNP	ZNF891	ENST00000397313	human	ensembl	70_37	-1	known	silent	c.510	p.G170	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF891	HGNC
