Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCC4	10257	genome.wustl.edu	37	13	95735503	95735503	+	Silent	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	13	95735503	95735503	G	A	SNP	ABCC4	ENST00000376887	human	ensembl	70_37	-1	known	silent	c.2577	p.A859	0.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC
ABCF2	10061	genome.wustl.edu	37	7	150915945	150915945	+	Missense_Mutation	SNP	C	C	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	7	150915945	150915945	C	A	SNP	ABCF2	ENST00000222388	human	ensembl	70_37	-1	known	missense	c.1032	p.R344S	0.992	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF2	HGNC
ADCY9	115	genome.wustl.edu	37	16	4164414	4164414	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	16	4164414	4164414	C	T	SNP	ADCY9	ENST00000294016	human	ensembl	70_37	-1	known	missense	c.1030	p.D344N	1.000	smart_A/G_cyclase	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC
ADRB2	154	genome.wustl.edu	37	5	148206606	148206608	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	5	148206606	148206608	TCA	-	DEL	ADRB2	ENST00000305988	human	ensembl	70_37	+1	known	in_frame_del	c.212_214	p.I72in_frame_del	1.000:1.000:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Adrgc_rcpt_B2,prints_GPCR_Rhodpsn,prints_Adrnrgc_rcpt	-	no_errors	ADRB2	HGNC
AGBL3	340351	genome.wustl.edu	37	7	134766496	134766496	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	7	134766496	134766496	T	-	DEL	AGBL3	ENST00000458078	human	ensembl	70_37	+1	known	frame_shift_del	c.1986	p.Y663fs	0.000	NULL	pfam_Peptidase_M14	-	no_errors	AGBL3	HGNC
AHI1	54806	genome.wustl.edu	37	6	135787166	135787166	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	135787166	135787166	C	G	SNP	AHI1	ENST00000265602	human	ensembl	70_37	-1	known	missense	c.535	p.E179Q	0.000	NULL	pfam_WD40_repeat,pfam_SH3_domain,pfam_SH3_2,superfamily_WD40_repeat_dom,superfamily_SH3_domain,smart_WD40_repeat,smart_SH3_domain,pfscan_SH3_domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_SH3_domain	-	no_errors	AHI1	HGNC
APEX2	27301	genome.wustl.edu	37	X	55033705	55033705	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	X	55033705	55033705	G	A	SNP	APEX2	ENST00000374987	human	ensembl	70_37	+1	known	missense	c.1394	p.R465H	0.071	NULL	pfam_Endo/exonuclease/phosphatase,pfam_Znf_GRF,superfamily_Endo/exonuclease/phosphatase,tigrfam_ExoDNase_III	-	no_errors	APEX2	HGNC
AVPR1A	552	genome.wustl.edu	37	12	63544264	63544264	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	12	63544264	63544264	C	T	SNP	AVPR1A	ENST00000299178	human	ensembl	70_37	-1	known	missense	c.353	p.R118H	0.996	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Vasoprsn_rcpt	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC
BCAR3	8412	genome.wustl.edu	37	1	94140433	94140433	+	Missense_Mutation	SNP	C	C	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	94140433	94140433	C	A	SNP	BCAR3	ENST00000260502	human	ensembl	70_37	-1	known	missense	c.54	p.Q18H	1.000	NULL	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	BCAR3	HGNC
BRWD3	254065	genome.wustl.edu	37	X	79942412	79942412	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	X	79942412	79942412	G	T	SNP	BRWD3	ENST00000373275	human	ensembl	70_37	-1	known	missense	c.3955	p.R1319S	0.994	superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quino_amine_DH_bsu,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD3	HGNC
C1orf43	25912	genome.wustl.edu	37	1	154179794	154179794	+	RNA	SNP	C	C	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	154179794	154179794	C	G	SNP	C1orf43	ENST00000483282	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C1orf43	HGNC
MROH8	140699	genome.wustl.edu	37	20	35740792	35740792	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	20	35740792	35740792	C	G	SNP	C20orf132	ENST00000400441	human	ensembl	70_37	-1	known	missense	c.2749	p.E917Q	0.868	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	C20orf132	HGNC
CCDC38	120935	genome.wustl.edu	37	12	96275265	96275265	+	Missense_Mutation	SNP	A	A	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	12	96275265	96275265	A	T	SNP	CCDC38	ENST00000344280	human	ensembl	70_37	-1	known	missense	c.988	p.L330M	0.075	NULL	NULL	-	no_errors	CCDC38	HGNC
CELF5	60680	genome.wustl.edu	37	19	3290270	3290270	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	19	3290270	3290270	G	T	SNP	CELF5	ENST00000292672	human	ensembl	70_37	+1	known	nonsense	c.1228	p.E410*	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF5	HGNC
CSHL1	1444	genome.wustl.edu	37	17	61987643	61987643	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	17	61987643	61987643	C	T	SNP	CSHL1	ENST00000309894	human	ensembl	70_37	-1	known	missense	c.350	p.R117Q	1.000	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	CSHL1	HGNC
DIP2C	22982	genome.wustl.edu	37	10	486841	486841	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	10	486841	486841	G	A	SNP	DIP2C	ENST00000280886	human	ensembl	70_37	-1	known	nonsense	c.364	p.Q122*	1.000	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC
DST	667	genome.wustl.edu	37	6	56484707	56484707	+	Silent	SNP	A	A	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	56484707	56484707	A	G	SNP	DST	ENST00000370765	human	ensembl	70_37	-1	known	silent	c.4125	p.N1375	0.454	NULL	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC
ECI2	10455	genome.wustl.edu	37	6	4116174	4116174	+	Silent	SNP	T	T	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	4116174	4116174	T	C	SNP	ECI2	ENST00000380118	human	ensembl	70_37	-1	known	silent	c.1119	p.G373	0.001	NULL	pfam_Acyl-CoA-binding_protein,pfam_Crotonase_core,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	-	no_errors	ECI2	HGNC
EIF4G3	8672	genome.wustl.edu	37	1	21139650	21139650	+	Splice_Site	SNP	C	C	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	21139650	21139650	C	G	SNP	EIF4G3	ENST00000374937	human	ensembl	70_37	-1	known	splice_site	c.4447+1	e29+1	1.000	-	-	-	no_errors	EIF4G3	HGNC
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	65055	65055	+	Silent	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	GL000212.1	65055	65055	G	A	SNP	ENSG00000212857	ENST00000391545	human	ensembl	70_37	+1	known	silent	c.804	p.P268	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene
ENSG00000258686	0	genome.wustl.edu	37	1	110592049	110592049	+	RNA	DEL	T	T	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	110592049	110592049	T	-	DEL	ENSG00000258686	ENST00000473429	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-773N10.5	Clone_based_vega_gene
ENSG00000259660	0	genome.wustl.edu	37	15	102304728	102304728	+	RNA	SNP	G	G	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	15	102304728	102304728	G	C	SNP	ENSG00000259660	ENST00000561463	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2611K5.6	Clone_based_vega_gene
FAM78A	286336	genome.wustl.edu	37	9	134134559	134134559	+	RNA	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	9	134134559	134134559	C	T	SNP	FAM78A	ENST00000247295	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM78A	HGNC
FLG	2312	genome.wustl.edu	37	1	152282256	152282256	+	Silent	SNP	A	A	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	152282256	152282256	A	G	SNP	FLG	ENST00000368799	human	ensembl	70_37	-1	known	silent	c.5106	p.D1702	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC
FRMPD4	9758	genome.wustl.edu	37	X	12734823	12734823	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	X	12734823	12734823	G	C	SNP	FRMPD4	ENST00000380682	human	ensembl	70_37	+1	known	missense	c.2245	p.E749Q	0.999	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ,pfscan_WW_Rsp5_WWP	-	no_errors	FRMPD4	HGNC
FUT8	2530	genome.wustl.edu	37	14	66190982	66190983	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	14	66190982	66190983	-	A	INS	FUT8	ENST00000360689	human	ensembl	70_37	+1	known	frame_shift_ins	c.1200_1201	p.R402fs	1.000:1.000	pirsf_Alpha1_6FUT_euk	superfamily_SH3_domain,smart_SH3_domain,pirsf_Alpha1_6FUT_euk	-	no_errors	FUT8	HGNC
HERC1	8925	genome.wustl.edu	37	15	64015507	64015507	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	15	64015507	64015507	C	T	SNP	HERC1	ENST00000443617	human	ensembl	70_37	-1	known	missense	c.3616	p.E1206K	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC
IFNA4	3441	genome.wustl.edu	37	9	21187205	21187205	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	9	21187205	21187205	G	A	SNP	IFNA4	ENST00000421715	human	ensembl	70_37	-1	known	missense	c.326	p.S109F	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA4	HGNC
ISM2	145501	genome.wustl.edu	37	14	77951065	77951065	+	Silent	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	14	77951065	77951065	C	T	SNP	ISM2	ENST00000342219	human	ensembl	70_37	-1	known	silent	c.339	p.P113	0.965	NULL	pfam_AMOP,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_AMOP,pfscan_AMOP,pfscan_Thrombospondin_1_rpt	-	no_errors	ISM2	HGNC
KHDRBS3	10656	genome.wustl.edu	37	8	136561003	136561003	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	8	136561003	136561003	G	A	SNP	KHDRBS3	ENST00000355849	human	ensembl	70_37	+1	known	missense	c.331	p.E111K	1.000	smart_KH_dom	smart_KH_dom	-	no_errors	KHDRBS3	HGNC
KNDC1	85442	genome.wustl.edu	37	10	135015315	135015315	+	Silent	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	10	135015315	135015315	C	T	SNP	KNDC1	ENST00000368572	human	ensembl	70_37	+1	known	silent	c.3306	p.A1102	0.904	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC
LIMK1	3984	genome.wustl.edu	37	7	73521443	73521443	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	7	73521443	73521443	C	T	SNP	LIMK1	ENST00000336180	human	ensembl	70_37	+1	known	missense	c.985	p.R329W	0.998	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC
LINC00476	100128782	genome.wustl.edu	37	9	98638198	98638198	+	RNA	SNP	G	G	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	9	98638198	98638198	G	C	SNP	LINC00476	ENST00000321517	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	LINC00476	HGNC
LOC100129858	100129858	genome.wustl.edu	37	4	141214528	141214528	+	RNA	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	4	141214528	141214528	C	T	SNP	LOC100129858	ENST00000512692	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-425I13.3	Clone_based_vega_gene
LOC100996300	100996300	genome.wustl.edu	37	6	17882266	17882266	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	17882266	17882266	G	A	SNP	LOC100996300	ENST00000398387	human	ensembl	70_37	-1	known	missense	c.113	p.A38V	0.050	NULL	NULL	-	no_errors	AL023807.2	Clone_based_ensembl_gene
MAML2	84441	genome.wustl.edu	37	11	95825372	95825374	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	11	95825372	95825374	TGT	-	DEL	MAML2	ENST00000440572	human	ensembl	70_37	-1	known	in_frame_del	c.1823_1821	p.Q611in_frame_del	0.003:0.003:0.003	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC
MAP1A	4130	genome.wustl.edu	37	15	43816925	43816925	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	15	43816925	43816925	G	A	SNP	MAP1A	ENST00000399453	human	ensembl	70_37	+1	known	missense	c.3254	p.G1085D	0.832	NULL	NULL	-	no_errors	MAP1A	HGNC
MAP3K4	4216	genome.wustl.edu	37	6	161491789	161491789	+	Silent	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	161491789	161491789	C	T	SNP	MAP3K4	ENST00000392142	human	ensembl	70_37	+1	known	silent	c.1857	p.L619	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K4	HGNC
MAP3K5	4217	genome.wustl.edu	37	6	136960681	136960681	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	136960681	136960681	T	-	DEL	MAP3K5	ENST00000359015	human	ensembl	70_37	-1	known	frame_shift_del	c.1934	p.K645fs	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC
MDK	4192	genome.wustl.edu	37	11	46404341	46404343	+	In_Frame_Del	DEL	CCC	CCC	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	CCC	CCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	11	46404341	46404343	CCC	-	DEL	MDK	ENST00000489525	human	ensembl	70_37	+1	known	in_frame_del	c.449_451	p.P154in_frame_del	0.000:0.000:0.001	NULL	pfam_Midkine_heparin-bd_GF_N,pfam_Midkine_heparin-bd_GF_C,superfamily_Midkine_heparin-bd_GF_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	-	no_errors	MDK	HGNC
MIR138-2	406930	genome.wustl.edu	37	16	56892472	56892472	+	RNA	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	16	56892472	56892472	C	T	SNP	MIR138-2	ENST00000384916	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR138-2	HGNC
MSTO1	55154	genome.wustl.edu	37	1	155716706	155716706	+	Missense_Mutation	SNP	T	T	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	155716706	155716706	T	C	SNP	MSTO1	ENST00000538143	human	ensembl	70_37	+1	known	missense	c.410	p.L137P	0.000	NULL	pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase	-	no_errors	MSTO1	HGNC
MT-ND5	4540	genome.wustl.edu	37	MT	12684	12684	+	Silent	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	MT	12684	12684	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	70_37	+1	known	silent	c.348	p.Q116	NULL	pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC
MT-ND5	4540	genome.wustl.edu	37	MT	12705	12705	+	Silent	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	MT	12705	12705	C	T	SNP	MT-ND5	ENST00000361567	human	ensembl	70_37	+1	known	silent	c.369	p.I123	NULL	pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC
MYH13	8735	genome.wustl.edu	37	17	10212865	10212865	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	17	10212865	10212865	G	C	SNP	MYH13	ENST00000252172	human	ensembl	70_37	-1	known	missense	c.4939	p.L1647V	0.998	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC
MYOF	26509	genome.wustl.edu	37	10	95237970	95237970	+	RNA	SNP	T	T	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	10	95237970	95237970	T	G	SNP	MYOF	ENST00000488645	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MYOF	HGNC
NCK1	4690	genome.wustl.edu	37	3	136664512	136664512	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	3	136664512	136664512	A	G	SNP	NCK1	ENST00000288986	human	ensembl	70_37	+1	known	missense	c.314	p.Y105C	1.000	superfamily_SH3_domain,pirsf_Cytoplasmic_NCK	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK1	HGNC
OR6Y1	391112	genome.wustl.edu	37	1	158517747	158517747	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	158517747	158517747	A	G	SNP	OR6Y1	ENST00000302617	human	ensembl	70_37	-1	known	missense	c.149	p.I50T	0.301	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6Y1	HGNC
PCDHB13	56123	genome.wustl.edu	37	5	140595330	140595330	+	Silent	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	5	140595330	140595330	G	A	SNP	PCDHB13	ENST00000341948	human	ensembl	70_37	+1	known	silent	c.1635	p.A545	0.181	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC
PLS1	5357	genome.wustl.edu	37	3	142396905	142396905	+	Missense_Mutation	SNP	A	A	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	3	142396905	142396905	A	C	SNP	PLS1	ENST00000337777	human	ensembl	70_37	+1	known	missense	c.529	p.I177L	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_EF-hand,superfamily_CH-domain,smart_EF_hand_Ca-bd,smart_CH-domain,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	PLS1	HGNC
PMPCA	23203	genome.wustl.edu	37	9	139312506	139312506	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	9	139312506	139312506	C	-	DEL	PMPCA	ENST00000371717	human	ensembl	70_37	+1	known	frame_shift_del	c.935	p.I314fs	1.000	pfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd	-	no_errors	PMPCA	HGNC
PMPCA	23203	genome.wustl.edu	37	9	139312511	139312511	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	9	139312511	139312511	A	G	SNP	PMPCA	ENST00000371717	human	ensembl	70_37	+1	known	missense	c.940	p.I314V	0.993	pfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd	-	no_errors	PMPCA	HGNC
POTED	317754	genome.wustl.edu	37	21	14982955	14982955	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	21	14982955	14982955	C	T	SNP	POTED	ENST00000299443	human	ensembl	70_37	+1	known	missense	c.406	p.R136C	0.002	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTED	HGNC
PTF1A	256297	genome.wustl.edu	37	10	23481515	23481515	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	10	23481515	23481515	C	T	SNP	PTF1A	ENST00000376504	human	ensembl	70_37	+1	known	missense	c.56	p.S19L	0.795	NULL	pfam_HLH_dom,superfamily_HLH_dom,smart_HLH_dom,pfscan_HLH_dom	-	no_errors	PTF1A	HGNC
RNF145	153830	genome.wustl.edu	37	5	158585861	158585861	+	Silent	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	5	158585861	158585861	G	A	SNP	RNF145	ENST00000274542	human	ensembl	70_37	-1	known	silent	c.1893	p.V631	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF145	HGNC
RPL10A	4736	genome.wustl.edu	37	6	35436196	35436196	+	RNA	SNP	C	C	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	6	35436196	35436196	C	G	SNP	RPL10A	ENST00000467020	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPL10A	HGNC
SIRT1	23411	genome.wustl.edu	37	10	69672357	69672357	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	10	69672357	69672357	G	A	SNP	SIRT1	ENST00000212015	human	ensembl	70_37	+1	known	missense	c.1484	p.G495D	1.000	pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT1	HGNC
SLC16A4	9122	genome.wustl.edu	37	1	110919773	110919773	+	Silent	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	110919773	110919773	C	T	SNP	SLC16A4	ENST00000369779	human	ensembl	70_37	-1	known	silent	c.1041	p.E347	0.999	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A4	HGNC
SLC25A39	51629	genome.wustl.edu	37	17	42400685	42400685	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	17	42400685	42400685	G	A	SNP	SLC25A39	ENST00000377095	human	ensembl	70_37	-1	known	missense	c.112	p.R38C	0.995	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A39	HGNC
SP6	80320	genome.wustl.edu	37	17	45924676	45924676	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	17	45924676	45924676	G	A	SNP	SP6	ENST00000342234	human	ensembl	70_37	-1	known	missense	c.1120	p.P374S	0.049	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP6	HGNC
SPAG17	200162	genome.wustl.edu	37	1	118609416	118609416	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	118609416	118609416	A	G	SNP	SPAG17	ENST00000336338	human	ensembl	70_37	-1	known	missense	c.2492	p.L831S	0.029	NULL	NULL	-	no_errors	SPAG17	HGNC
STARD13	90627	genome.wustl.edu	37	13	33701650	33701650	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	13	33701650	33701650	G	T	SNP	STARD13	ENST00000336934	human	ensembl	70_37	-1	known	missense	c.1782	p.H594Q	1.000	NULL	pfam_START_lipid-bd,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom	-	no_errors	STARD13	HGNC
STC2	8614	genome.wustl.edu	37	5	172755130	172755130	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	5	172755130	172755130	G	A	SNP	STC2	ENST00000265087	human	ensembl	70_37	-1	known	missense	c.67	p.R23W	0.191	pfam_Stanniocalcin	pfam_Stanniocalcin	-	no_errors	STC2	HGNC
SUGT1P3	283507	genome.wustl.edu	37	13	41495643	41495643	+	Silent	SNP	A	A	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	13	41495643	41495643	A	C	SNP	SUGT1P3	ENST00000494063	human	ensembl	70_37	-1	known	silent	c.63	p.A21	0.931	NULL	pfscan_TPR-contain_dom	-	no_errors	SUGT1P3	HGNC
TPR	7175	genome.wustl.edu	37	1	186303601	186303601	+	Missense_Mutation	SNP	T	T	G			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	1	186303601	186303601	T	G	SNP	TPR	ENST00000367478	human	ensembl	70_37	-1	known	missense	c.5038	p.K1680Q	1.000	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC
WDR11	55717	genome.wustl.edu	37	10	122668664	122668664	+	RNA	SNP	C	C	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	10	122668664	122668664	C	T	SNP	WDR11	ENST00000497136	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WDR11	HGNC
YLPM1	56252	genome.wustl.edu	37	14	75266333	75266333	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	14	75266333	75266333	G	T	SNP	YLPM1	ENST00000325680	human	ensembl	70_37	+1	known	missense	c.4333	p.V1445L	1.000	NULL	superfamily_FH2_actin-bd	-	no_errors	YLPM1	Uniprot_genename
ZNF777	27153	genome.wustl.edu	37	7	149153010	149153010	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LC-01A-11D-A20U-09	TCGA-IR-A3LC-10A-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ae152f3-8825-4ebc-ba32-d491560a8bf4	c3d75701-b40d-4e8f-aa95-d71183218400	7	149153010	149153010	G	C	SNP	ZNF777	ENST00000247930	human	ensembl	70_37	-1	known	missense	c.104	p.S35C	0.082	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC
