Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ADAMTS16	170690	genome.wustl.edu	37	5	5186227	5186227	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	5	5186227	5186227	C	T	SNP	ADAMTS16	ENST00000274181	human	ensembl	70_37	+1	known	missense	c.826	p.R276W	0.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC
ALMS1	7840	genome.wustl.edu	37	2	73677738	73677738	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	2	73677738	73677738	G	A	SNP	ALMS1	ENST00000264448	human	ensembl	70_37	+1	known	missense	c.4081	p.V1361I	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC
ATM	472	genome.wustl.edu	37	11	108178704	108178704	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	11	108178704	108178704	C	T	SNP	ATM	ENST00000278616	human	ensembl	70_37	+1	known	nonsense	c.5755	p.Q1919*	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC
AVPR1B	553	genome.wustl.edu	37	1	206225182	206225182	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	206225182	206225182	G	A	SNP	AVPR1B	ENST00000367126	human	ensembl	70_37	+1	known	missense	c.742	p.D248N	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_rcpt_V1B	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_rcpt_V1B,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn,prints_Vprs_V1A_rcpt	-	no_errors	AVPR1B	HGNC
BCHE	590	genome.wustl.edu	37	3	165547887	165547887	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	3	165547887	165547887	G	C	SNP	BCHE	ENST00000264381	human	ensembl	70_37	-1	known	missense	c.935	p.T312S	0.012	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC
CAMSAP1	157922	genome.wustl.edu	37	9	138714664	138714664	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	9	138714664	138714664	G	A	SNP	CAMSAP1	ENST00000409386	human	ensembl	70_37	-1	known	missense	c.1876	p.R626W	0.641	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrell-like,superfamily_CH-domain	-	no_errors	CAMSAP1	HGNC
CC2D1B	200014	genome.wustl.edu	37	1	52818973	52818976	+	RNA	DEL	AGAT	AGAT	-			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	AGAT	AGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	52818973	52818976	AGAT	-	DEL	CC2D1B	ENST00000460261	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001:0.000:0.000:0.000	-	-	-	no_errors	CC2D1B	HGNC
DBC1	0	genome.wustl.edu	37	9	121976225	121976225	+	Silent	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	9	121976225	121976225	G	A	SNP	DBC1	ENST00000265922	human	ensembl	70_37	-1	known	silent	c.894	p.A298	0.221	NULL	pfam_MACPF,smart_MACPF	-	no_errors	DBC1	HGNC
DCAF4L1	285429	genome.wustl.edu	37	4	41984755	41984755	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	4	41984755	41984755	G	A	SNP	DCAF4L1	ENST00000333141	human	ensembl	70_37	+1	known	missense	c.946	p.A316T	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC
DUOXA1	90527	genome.wustl.edu	37	15	45415085	45415085	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	15	45415085	45415085	G	C	SNP	DUOXA1	ENST00000267803	human	ensembl	70_37	-1	known	missense	c.128	p.P43R	1.000	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA1	HGNC
E2F8	79733	genome.wustl.edu	37	11	19251318	19251318	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	11	19251318	19251318	G	T	SNP	E2F8	ENST00000250024	human	ensembl	70_37	-1	known	missense	c.1576	p.Q526K	1.000	NULL	pfam_E2F_TDP	-	no_errors	E2F8	HGNC
AGO3	192669	genome.wustl.edu	37	1	36475026	36475027	+	RNA	INS	-	-	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	36475026	36475027	-	A	INS	EIF2C3	ENST00000479395	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.026:0.011	-	-	-	no_errors	EIF2C3	HGNC
ELOVL1	64834	genome.wustl.edu	37	1	43829755	43829755	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	43829755	43829755	G	T	SNP	ELOVL1	ENST00000372458	human	ensembl	70_37	-1	known	missense	c.672	p.S224R	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL1	HGNC
FANCC	2176	genome.wustl.edu	37	9	98009763	98009763	+	Silent	SNP	A	A	G			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	9	98009763	98009763	A	G	SNP	FANCC	ENST00000289081	human	ensembl	70_37	-1	known	silent	c.201	p.I67	1.000	pfam_Fanconi,pirsf_Fanconi	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	-	no_errors	FANCC	HGNC
FJX1	24147	genome.wustl.edu	37	11	35642248	35642248	+	RNA	DEL	A	A	-			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	11	35642248	35642248	A	-	DEL	FJX1	ENST00000532914	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FJX1	HGNC
GPRIN2	9721	genome.wustl.edu	37	10	46999178	46999178	+	Missense_Mutation	SNP	A	A	C			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	10	46999178	46999178	A	C	SNP	GPRIN2	ENST00000374314	human	ensembl	70_37	+1	known	missense	c.298	p.T100P	0.084	NULL	NULL	-	no_errors	GPRIN2	HGNC
GTF3C1	2975	genome.wustl.edu	37	16	27504033	27504033	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	16	27504033	27504033	G	A	SNP	GTF3C1	ENST00000356183	human	ensembl	70_37	-1	known	missense	c.2878	p.R960C	1.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC
HERC1	8925	genome.wustl.edu	37	15	63972950	63972952	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	15	63972950	63972952	CCT	-	DEL	HERC1	ENST00000443617	human	ensembl	70_37	-1	known	in_frame_del	c.6251_6249	p.RG2083in_frame_delS	1.000:1.000:0.999	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC
HRNR	388697	genome.wustl.edu	37	1	152192700	152192700	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	152192700	152192700	C	T	SNP	HRNR	ENST00000368801	human	ensembl	70_37	-1	known	missense	c.1405	p.E469K	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC
ITGB6	3694	genome.wustl.edu	37	2	160964291	160964291	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	2	160964291	160964291	C	T	SNP	ITGB6	ENST00000283249	human	ensembl	70_37	-1	known	missense	c.2167	p.G723R	1.000	pirsf_Integrin_bsu,prints_Integrin_bsu	pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,pirsf_Integrin_bsu,prints_Integrin_bsu	-	no_errors	ITGB6	HGNC
KCNJ6	3763	genome.wustl.edu	37	21	39086687	39086687	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	21	39086687	39086687	G	T	SNP	KCNJ6	ENST00000288309	human	ensembl	70_37	-1	known	missense	c.773	p.T258K	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.2	-	no_errors	KCNJ6	HGNC
KIF14	9928	genome.wustl.edu	37	1	200528488	200528488	+	Silent	SNP	A	A	G			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	200528488	200528488	A	G	SNP	KIF14	ENST00000367350	human	ensembl	70_37	-1	known	silent	c.4323	p.H1441	0.001	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF14	HGNC
MIR3118-6	100422906	genome.wustl.edu	37	15	21038126	21038128	+	RNA	DEL	TAC	TAC	-			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	TAC	TAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	15	21038126	21038128	TAC	-	DEL	MIR3118-6	ENST00000584700	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	MIR3118-6	HGNC
MT-CO2	4513	genome.wustl.edu	37	MT	7776	7776	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	MT	7776	7776	T	C	SNP	MT-CO2	ENST00000361739	human	ensembl	70_37	+1	known	missense	c.191	p.V64A	NULL	pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cyt_c_oxidase_su2-like_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,tigrfam_Cyt_c_oxidase_su2	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2-like_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC
NCF2	4688	genome.wustl.edu	37	1	183542373	183542373	+	Missense_Mutation	SNP	T	T	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	183542373	183542373	T	A	SNP	NCF2	ENST00000367535	human	ensembl	70_37	-1	known	missense	c.556	p.N186Y	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_TPR-1,pfam_OPR_PB1,superfamily_SH3_domain,smart_TPR_repeat,smart_SH3_domain,smart_OPR_PB1,pfscan_SH3_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_p67phox,prints_SH3_domain	-	no_errors	NCF2	HGNC
NOP14	8602	genome.wustl.edu	37	4	2940996	2940996	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	4	2940996	2940996	C	T	SNP	NOP14	ENST00000416614	human	ensembl	70_37	-1	known	missense	c.2393	p.R798H	0.986	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC
OVOL2	58495	genome.wustl.edu	37	20	18022346	18022346	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	20	18022346	18022346	C	T	SNP	OVOL2	ENST00000278780	human	ensembl	70_37	-1	known	missense	c.343	p.D115N	0.611	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OVOL2	HGNC
PCGF5	84333	genome.wustl.edu	37	10	93011180	93011180	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	10	93011180	93011180	G	A	SNP	PCGF5	ENST00000336126	human	ensembl	70_37	+1	known	missense	c.457	p.G153R	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF5	HGNC
PLCB1	23236	genome.wustl.edu	37	20	8665620	8665620	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	20	8665620	8665620	G	A	SNP	PLCB1	ENST00000338037	human	ensembl	70_37	+1	known	missense	c.904	p.E302K	1.000	pirsf_PLC-beta,pfam_PLipase_C_EF-hand-like	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC
POLR2B	5431	genome.wustl.edu	37	4	57872999	57872999	+	Missense_Mutation	SNP	T	T	G			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	4	57872999	57872999	T	G	SNP	POLR2B	ENST00000314595	human	ensembl	70_37	+1	known	missense	c.1235	p.L412R	1.000	pfam_RNA_pol_bsu_protrusion	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR2B	HGNC
PTPRD	5789	genome.wustl.edu	37	9	8499699	8499699	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	9	8499699	8499699	C	T	SNP	PTPRD	ENST00000356435	human	ensembl	70_37	-1	known	missense	c.2270	p.G757D	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC
RAB13	5872	genome.wustl.edu	37	1	153954808	153954808	+	RNA	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	1	153954808	153954808	C	T	SNP	RAB13	ENST00000462680	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RAB13	HGNC
SGOL1	151648	genome.wustl.edu	37	3	20212755	20212755	+	RNA	DEL	A	A	-			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	3	20212755	20212755	A	-	DEL	SGOL1	ENST00000460637	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SGOL1	HGNC
SH3BP4	23677	genome.wustl.edu	37	2	235949858	235949858	+	Missense_Mutation	SNP	A	A	C			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	2	235949858	235949858	A	C	SNP	SH3BP4	ENST00000344528	human	ensembl	70_37	+1	known	missense	c.445	p.K149Q	0.091	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_ZU5,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	SH3BP4	HGNC
SIRPA	140885	genome.wustl.edu	37	20	1915398	1915398	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	20	1915398	1915398	C	T	SNP	SIRPA	ENST00000400068	human	ensembl	70_37	+1	known	nonsense	c.1264	p.Q422*	1.000	NULL	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	SIRPA	HGNC
SLC12A7	10723	genome.wustl.edu	37	5	1078023	1078023	+	Silent	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	5	1078023	1078023	G	A	SNP	SLC12A7	ENST00000264930	human	ensembl	70_37	-1	known	silent	c.1554	p.A518	0.553	pfam_AA-permease_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC
SPAST	6683	genome.wustl.edu	37	2	32340826	32340826	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	2	32340826	32340826	G	A	SNP	SPAST	ENST00000315285	human	ensembl	70_37	+1	known	missense	c.926	p.R309H	0.924	pirsf_Spastin	pfam_ATPase_AAA_core,pfam_MIT,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_MIT,smart_AAA+_ATPase,pirsf_Spastin	-	no_errors	SPAST	HGNC
TDRD1	56165	genome.wustl.edu	37	10	115973875	115973875	+	Splice_Site	SNP	T	T	C			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	10	115973875	115973875	T	C	SNP	TDRD1	ENST00000251864	human	ensembl	70_37	+1	known	splice_site	c.2212+2	e15+2	1.000	-	-	-	no_errors	TDRD1	HGNC
TRIL	9865	genome.wustl.edu	37	7	28995360	28995360	+	RNA	SNP	C	C	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	7	28995360	28995360	C	T	SNP	TRIL	ENST00000322982	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.973	-	-	-	no_errors	TRIL	HGNC
TRO	7216	genome.wustl.edu	37	X	54951467	54951467	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	X	54951467	54951467	A	G	SNP	TRO	ENST00000173898	human	ensembl	70_37	+1	known	missense	c.1451	p.E484G	1.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	TRO	HGNC
TTLL12	23170	genome.wustl.edu	37	22	43569750	43569750	+	Missense_Mutation	SNP	T	T	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	22	43569750	43569750	T	A	SNP	TTLL12	ENST00000216129	human	ensembl	70_37	-1	known	missense	c.1312	p.I438F	1.000	pfam_Tub_tyr_ligase	pfam_Tub_tyr_ligase	-	no_errors	TTLL12	HGNC
WNK2	65268	genome.wustl.edu	37	9	95947670	95947670	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	9	95947670	95947670	G	T	SNP	WNK2	ENST00000297954	human	ensembl	70_37	+1	known	missense	c.459	p.K153N	0.624	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	WNK2	HGNC
XIST	7503	genome.wustl.edu	37	X	73044044	73044044	+	RNA	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	X	73044044	73044044	G	A	SNP	XIST	ENST00000429829	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC
ZNF521	25925	genome.wustl.edu	37	18	22805593	22805593	+	Silent	SNP	G	G	A			TCGA-JW-A5VG-01A-11D-A28B-09	TCGA-JW-A5VG-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	abc2974a-e46f-4080-8dea-49c60ee75673	7d2b2722-22bc-4ac7-aea3-0040394413c0	18	22805593	22805593	G	A	SNP	ZNF521	ENST00000361524	human	ensembl	70_37	-1	known	silent	c.2289	p.N763	0.018	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC
