Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
HECW1	23072	hgsc.bcm.edu	36	7	43451673	43451673	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
COBL	23242	hgsc.bcm.edu	36	7	51063353	51063353	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SGCE	8910	hgsc.bcm.edu	36	7	94086199	94086199	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ARMC10	83787	hgsc.bcm.edu	36	7	102526016	102526016	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FEZF1	389549	hgsc.bcm.edu	36	7	121729591	121729591	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
GPR37	2861	hgsc.bcm.edu	36	7	124174280	124174280	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FLNC	2318	hgsc.bcm.edu	36	7	128272049	128272049	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KEL	3792	hgsc.bcm.edu	36	7	142351604	142351604	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
EZH2	2146	hgsc.bcm.edu	36	7	148146108	148146108	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MAVS	57506	hgsc.bcm.edu	36	20	3786404	3786404	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZNF831	128611	hgsc.bcm.edu	36	20	57201421	57201421	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LAMA5	3911	hgsc.bcm.edu	36	20	60354600	60354600	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PKDREJ	10343	hgsc.bcm.edu	36	22	45037238	45037238	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FBXO34	55030	hgsc.bcm.edu	36	14	54888170	54888170	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ATG2B	55102	hgsc.bcm.edu	36	14	95853851	95853851	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PCDH11Y	83259	hgsc.bcm.edu	36	Y	5665726	5665726	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
STK11	6794	hgsc.bcm.edu	36	19	1158080	1158080	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KHSRP	8570	hgsc.bcm.edu	36	19	6367316	6367316	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZNF101	94039	hgsc.bcm.edu	36	19	19651576	19651576	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PHLDB3	653583	hgsc.bcm.edu	36	19	48698119	48698119	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FCGRT	2217	hgsc.bcm.edu	36	19	54709545	54709545	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
AKT1S1	84335	hgsc.bcm.edu	36	19	55065103	55065103	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LRRC4B	94030	hgsc.bcm.edu	36	19	55714203	55714203	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
NLRP13	126204	hgsc.bcm.edu	36	19	61135328	61135328	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
USP29	57663	hgsc.bcm.edu	36	19	62332725	62332725	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MYOM2	9172	hgsc.bcm.edu	36	8	2080014	2080014	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CSMD1	64478	hgsc.bcm.edu	36	8	3193009	3193009	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RP1L1	94137	hgsc.bcm.edu	36	8	10507969	10507969	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
DLC1	10395	hgsc.bcm.edu	36	8	13001580	13001580	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
DLC1	10395	hgsc.bcm.edu	36	8	13303482	13303482	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LZTS1	11178	hgsc.bcm.edu	36	8	20154759	20154759	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MCM4	4173	hgsc.bcm.edu	36	8	49045067	49045067	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZFHX4	79776	hgsc.bcm.edu	36	8	77779830	77779830	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CNBD1	168975	hgsc.bcm.edu	36	8	88435077	88435077	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZFPM2	23414	hgsc.bcm.edu	36	8	106884007	106884007	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PANK4	55229	hgsc.bcm.edu	36	1	2441158	2441158	+	Silent	SNP	G	G	A	rs34724650	byCluster	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
UBR4	23352	hgsc.bcm.edu	36	1	19372154	19372154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C1orf151	440574	hgsc.bcm.edu	36	1	19822583	19822583	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZYG11A	440590	hgsc.bcm.edu	36	1	53095676	53095676	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KIAA1107	23285	hgsc.bcm.edu	36	1	92416474	92416474	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
AMY2B	280	hgsc.bcm.edu	36	1	103917360	103917360	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
AMY2B	280	hgsc.bcm.edu	36	1	103919657	103919657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MOV10	4343	hgsc.bcm.edu	36	1	113040591	113040591	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
IGSF3	3321	hgsc.bcm.edu	36	1	116944238	116944238	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SPAG17	200162	hgsc.bcm.edu	36	1	118338610	118338610	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FLG	2312	hgsc.bcm.edu	36	1	150546429	150546429	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LCE1E	353135	hgsc.bcm.edu	36	1	151026420	151026420	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
INSRR	3645	hgsc.bcm.edu	36	1	155088433	155088433	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CD1C	911	hgsc.bcm.edu	36	1	156529154	156529154	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CD1E	913	hgsc.bcm.edu	36	1	156592472	156592472	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SPTA1	6708	hgsc.bcm.edu	36	1	156873164	156873164	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TNFSF4	7292	hgsc.bcm.edu	36	1	171424283	171424283	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RNASEL	6041	hgsc.bcm.edu	36	1	180811316	180811316	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CFHR5	81494	hgsc.bcm.edu	36	1	195229990	195229990	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KDM5B	10765	hgsc.bcm.edu	36	1	200965707	200965707	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OBSCN	84033	hgsc.bcm.edu	36	1	226498859	226498859	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RYR2	6262	hgsc.bcm.edu	36	1	235863607	235863607	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PLD5	200150	hgsc.bcm.edu	36	1	240330663	240330663	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR51B4	79339	hgsc.bcm.edu	36	11	5279383	5279383	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR2D3	120775	hgsc.bcm.edu	36	11	6898898	6898898	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CTR9	9646	hgsc.bcm.edu	36	11	10734924	10734924	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR4B1	119765	hgsc.bcm.edu	36	11	48195607	48195607	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR4S2	219431	hgsc.bcm.edu	36	11	55175560	55175560	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TIGD3	220359	hgsc.bcm.edu	36	11	64880304	64880304	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FAM168A	23201	hgsc.bcm.edu	36	11	72800196	72800196	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ATM	472	hgsc.bcm.edu	36	11	107632177	107632177	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CD3D	915	hgsc.bcm.edu	36	11	117716413	117716413	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OPCML	4978	hgsc.bcm.edu	36	11	132032266	132032266	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
HFE	3077	hgsc.bcm.edu	36	6	26199062	26199062	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR2J2	26707	hgsc.bcm.edu	36	6	29249581	29249581	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR2H1	26716	hgsc.bcm.edu	36	6	29537912	29537912	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SLC39A7	7922	hgsc.bcm.edu	36	6	33279339	33279339	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C6orf222	389384	hgsc.bcm.edu	36	6	36401072	36401072	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
BAI3	577	hgsc.bcm.edu	36	6	70106023	70106023	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FAM184A	79632	hgsc.bcm.edu	36	6	119366430	119366430	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MAP3K5	4217	hgsc.bcm.edu	36	6	136920607	136920607	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C6orf103	79747	hgsc.bcm.edu	36	6	147027088	147027088	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
NUP43	348995	hgsc.bcm.edu	36	6	150105343	150105343	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LPA	4018	hgsc.bcm.edu	36	6	160926205	160926205	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TP53	7157	hgsc.bcm.edu	36	17	7518254	7518254	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TP53	7157	hgsc.bcm.edu	36	17	7518993	7518993	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TOP3A	7156	hgsc.bcm.edu	36	17	18146000	18146000	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ERBB2	2064	hgsc.bcm.edu	36	17	35135142	35135142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CDC6	990	hgsc.bcm.edu	36	17	35701315	35701315	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TUBD1	51174	hgsc.bcm.edu	36	17	55298784	55298784	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SSTR2	6752	hgsc.bcm.edu	36	17	68677526	68677526	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
QRICH2	84074	hgsc.bcm.edu	36	17	71798961	71798961	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PRPSAP1	5635	hgsc.bcm.edu	36	17	71836512	71836512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SYNJ1	8867	hgsc.bcm.edu	36	21	32933092	32933092	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C2CD2	25966	hgsc.bcm.edu	36	21	42200250	42200250	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CREBBP	1387	hgsc.bcm.edu	36	16	3757736	3757736	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SNX29	92017	hgsc.bcm.edu	36	16	12479117	12479117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ACSM2A	123876	hgsc.bcm.edu	36	16	20394236	20394236	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
XPO6	23214	hgsc.bcm.edu	36	16	28020388	28020388	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CDH1	51343	hgsc.bcm.edu	36	16	67407021	67407021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TYMS	7298	hgsc.bcm.edu	36	18	659144	659144	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SLC14A2	8170	hgsc.bcm.edu	36	18	41459788	41459788	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZNF407	55628	hgsc.bcm.edu	36	18	70721981	70721981	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FANCD2	2177	hgsc.bcm.edu	36	3	10059272	10059272	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
QTRTD1	79691	hgsc.bcm.edu	36	3	115287356	115287356	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C3orf37	56941	hgsc.bcm.edu	36	3	130506311	130506311	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
EPHB1	2047	hgsc.bcm.edu	36	3	136403102	136403102	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CP	1356	hgsc.bcm.edu	36	3	150410777	150410777	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LEKR1	389170	hgsc.bcm.edu	36	3	158245870	158245870	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZBBX	79740	hgsc.bcm.edu	36	3	168506174	168506174	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PIK3CA	5290	hgsc.bcm.edu	36	3	180418785	180418785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MUC4	4585	hgsc.bcm.edu	36	3	196994577	196994577	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CSDA	8531	hgsc.bcm.edu	36	12	10753822	10753822	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SOX5	6660	hgsc.bcm.edu	36	12	23578528	23578528	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
GALNT6	11226	hgsc.bcm.edu	36	12	50040797	50040797	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
XPOT	11260	hgsc.bcm.edu	36	12	63110249	63110249	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TMEM132C	92293	hgsc.bcm.edu	36	12	127756554	127756554	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
AQR	9716	hgsc.bcm.edu	36	15	32936361	32936361	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MEIS2	4212	hgsc.bcm.edu	36	15	34971695	34971695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
LRRC57	255252	hgsc.bcm.edu	36	15	40624610	40624610	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TTBK2	146057	hgsc.bcm.edu	36	15	40831560	40831560	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TP53BP1	7158	hgsc.bcm.edu	36	15	41495825	41495825	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CGNL1	84952	hgsc.bcm.edu	36	15	55517827	55517827	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
IL1RAPL1	11141	hgsc.bcm.edu	36	X	29845546	29845546	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
DDX3X	1654	hgsc.bcm.edu	36	X	41088453	41088453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
UBQLN2	29978	hgsc.bcm.edu	36	X	56608615	56608615	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FAM123B	139285	hgsc.bcm.edu	36	X	63328508	63328508	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
NLGN3	54413	hgsc.bcm.edu	36	X	70304081	70304081	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
POU3F4	5456	hgsc.bcm.edu	36	X	82651035	82651035	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CAPN6	827	hgsc.bcm.edu	36	X	110376546	110376546	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PRRG3	79057	hgsc.bcm.edu	36	X	150619986	150619986	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CRIPAK	285464	hgsc.bcm.edu	36	4	1378790	1378790	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SH3TC1	54436	hgsc.bcm.edu	36	4	8280478	8280478	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
BOD1L	259282	hgsc.bcm.edu	36	4	13213973	13213973	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TXK	7294	hgsc.bcm.edu	36	4	47790873	47790873	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
YTHDC1	91746	hgsc.bcm.edu	36	4	68867040	68867040	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ADAMTS3	9508	hgsc.bcm.edu	36	4	73398336	73398336	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ANTXR2	118429	hgsc.bcm.edu	36	4	81148706	81148706	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
WDFY3	23001	hgsc.bcm.edu	36	4	85897323	85897323	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TACR3	6870	hgsc.bcm.edu	36	4	104730479	104730479	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RNF150	57484	hgsc.bcm.edu	36	4	142273080	142273080	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OTUD4	54726	hgsc.bcm.edu	36	4	146291474	146291474	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ROCK2	9475	hgsc.bcm.edu	36	2	11251859	11251859	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
GTF2A1L	11036	hgsc.bcm.edu	36	2	48727390	48727390	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
XPO1	7514	hgsc.bcm.edu	36	2	61566588	61566588	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PCBP1	5093	hgsc.bcm.edu	36	2	70168878	70168878	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CD207	50489	hgsc.bcm.edu	36	2	70914336	70914336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CTNNA2	1496	hgsc.bcm.edu	36	2	79954819	79954819	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FAM123C	205147	hgsc.bcm.edu	36	2	131236325	131236325	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FAM123C	205147	hgsc.bcm.edu	36	2	131236776	131236776	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PLA2R1	22925	hgsc.bcm.edu	36	2	160609865	160609865	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KLHL23	151230	hgsc.bcm.edu	36	2	170300833	170300833	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OSBPL6	114880	hgsc.bcm.edu	36	2	178956127	178956127	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TTN	7273	hgsc.bcm.edu	36	2	179165467	179165467	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FAM171B	165215	hgsc.bcm.edu	36	2	187326936	187326936	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ANKRD44	91526	hgsc.bcm.edu	36	2	197586603	197586603	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MAP2	10988	hgsc.bcm.edu	36	2	210269068	210269068	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ERBB4	2066	hgsc.bcm.edu	36	2	211997187	211997187	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
VWC2L	402117	hgsc.bcm.edu	36	2	215148755	215148755	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ATIC	471	hgsc.bcm.edu	36	2	215885546	215885546	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C2orf24	27013	hgsc.bcm.edu	36	2	219745608	219745608	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SERPINE2	5270	hgsc.bcm.edu	36	2	224564839	224564839	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KIAA1486	57624	hgsc.bcm.edu	36	2	225982020	225982020	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
GLIPR2	152007	hgsc.bcm.edu	36	9	36138567	36138567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZNF782	158431	hgsc.bcm.edu	36	9	98621658	98621658	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
AKNA	80709	hgsc.bcm.edu	36	9	116159021	116159021	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR1J4	26219	hgsc.bcm.edu	36	9	124321918	124321918	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
OR1L8	138881	hgsc.bcm.edu	36	9	124370328	124370328	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
SH2D3C	10044	hgsc.bcm.edu	36	9	129546800	129546800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
GTF3C5	9328	hgsc.bcm.edu	36	9	134923105	134923105	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FREM2	341640	hgsc.bcm.edu	36	13	38323975	38323975	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RB1	5925	hgsc.bcm.edu	36	13	47845599	47845599	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
FNDC3A	22862	hgsc.bcm.edu	36	13	48670151	48670151	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
UTP14C	440138	hgsc.bcm.edu	36	13	51501443	51501443	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
THSD1	55901	hgsc.bcm.edu	36	13	51850783	51850783	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
NALCN	259232	hgsc.bcm.edu	36	13	100526280	100526280	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ANKRD26	22852	hgsc.bcm.edu	36	10	27346514	27346514	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ANKRD26	22852	hgsc.bcm.edu	36	10	27364255	27364255	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PCDH15	65217	hgsc.bcm.edu	36	10	55583050	55583050	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
DOCK1	1793	hgsc.bcm.edu	36	10	128720393	128720393	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ADAM8	101	hgsc.bcm.edu	36	10	134936823	134936823	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PLEKHG4B	153478	hgsc.bcm.edu	36	5	209287	209287	+	Silent	SNP	G	G	A	rs6554830	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
C5orf42	65250	hgsc.bcm.edu	36	5	37262506	37262506	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RGS7BP	401190	hgsc.bcm.edu	36	5	63907418	63907418	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
APC	324	hgsc.bcm.edu	36	5	112202530	112202530	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
APC	324	hgsc.bcm.edu	36	5	112203538	112203538	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
APC	324	hgsc.bcm.edu	36	5	112203579	112203579	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
PCDHA2	56146	hgsc.bcm.edu	36	5	140155819	140155819	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CSF1R	1436	hgsc.bcm.edu	36	5	149430312	149430312	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
RANBP17	64901	hgsc.bcm.edu	36	5	170276188	170276188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
NOP16	51491	hgsc.bcm.edu	36	5	175743842	175743842	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
UNC5A	90249	hgsc.bcm.edu	36	5	176222382	176222382	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZNF354C	30832	hgsc.bcm.edu	36	5	178438431	178438431	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TCF7L2	6934	hgsc.bcm.edu	36	10	114900873	114900873	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
CRIPAK	285464	hgsc.bcm.edu	36	4	1378622	1378623	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
KIAA1211	57482	hgsc.bcm.edu	36	4	56875333	56875334	+	In_Frame_Ins	INS	-	-	GGAGCGGAGGGAGCGGAG	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
EYS	346007	hgsc.bcm.edu	36	6	65074937	65074938	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
WASH1	375690	hgsc.bcm.edu	36	9	8075	8075	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
MARS	4141	hgsc.bcm.edu	36	12	56169320	56169320	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
USP31	84196	hgsc.bcm.edu	36	16	23024335	23024335	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
TGIF1	7050	hgsc.bcm.edu	36	18	3442223	3442223	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
ZNF516	9658	hgsc.bcm.edu	36	18	72219946	72219946	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AH-6544-01A-11D-1826-10	TCGA-AH-6544-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	12456af5-23f0-4e3f-a623-ce1866ab375e	739c1712-069d-4442-8eb1-d91149388521
