Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
DNHD1	144132	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	6588129	6588129	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ATGCAGGAGCGGCTGCTGACG	0.542	9	12
CD82	3732	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	44640201	44640201	+	Silent	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCTGCATGGAGAAGGTGCAGG	0.667	21	76
CCDC84	338657	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	118885707	118885707	+	Missense_Mutation	SNP	C	C	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TTTTCAGGTGCCACACCTCCC	0.353	31	71
ACAD8	27034	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	134130962	134130962	+	Missense_Mutation	SNP	C	C	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCAGCCAACACGAGCTGTGAT	0.612	3	23
TPP2	7174	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	103299660	103299660	+	Missense_Mutation	SNP	G	G	C	rs142623109		TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CAGAACAAAAGACAGATGGGT	0.388	23	43
PLA2G4F	255189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	42434838	42434838	+	Silent	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCTCCTCCATGTCCTCAGGGC	0.592	29	69
RPGRIP1L	23322	hgsc.bcm.edu;broad.mit.edu	37	16	53679916	53679916	+	Splice_Site	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCTGACTTAACTGGAAAAACA	0.358	21	49
POLR2A	5430	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7414879	7414879	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GTACGCACCACGTCCAATGAC	0.597	8	31
KRT222	125113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	38812821	38812821	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TTCCTCAATCGAGGGTTATCT	0.338	34	85
SERPINB7	8710	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	61449736	61449736	+	Missense_Mutation	SNP	T	T	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCTGGTCCGCTTGGGCGCTCA	0.473	39	94
ZNF675	171392	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	23836144	23836144	+	Missense_Mutation	SNP	T	T	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TTCTCTCCAGTATGAATTATC	0.343	21	71
ZNF536	9745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	31038959	31038959	+	Silent	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GGGCTGGGCCGCTGTCTGGGC	0.567	35	103
KIAA0355	9710	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	34832986	34832986	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCCCAGCCGGGACTGGCACCT	0.647	54	142
TNNT1	7138	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55649402	55649402	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ATCCTCTGCCCGCTTCTTGGC	0.572	37	98
NBL1	4681	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	19981874	19981874	+	Silent	SNP	A	A	C			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CACAGTCCACAGAGTCCCTGG	0.622	32	66
ERI3	79033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	44804751	44804751	+	Missense_Mutation	SNP	T	T	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCACGTGGCCTCAAAGTCCAG	0.547	145	229
FLG	2312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	152275719	152275719	+	Silent	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TGGAAGCAGACTCAGATCGCC	0.567	43	158
PEAR1	375033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	156883725	156883725	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CGGGACCTGCCCAGCTTGCCA	0.617	33	42
PAPPA2	60676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	176525627	176525627	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GGCCAAGGTTCGAAGACCCAG	0.567	113	132
RGS21	431704	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	192321182	192321182	+	Missense_Mutation	SNP	C	C	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TATAGCTGGTCTAGATGCTTT	0.303	19	41
PLCG1	5335	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	39802384	39802384	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CGTGGTGTATGAGGAAGACAT	0.517	54	121
ABCG1	9619	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	43708163	43708163	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCAGACAAAACGATTAAAGGG	0.562	22	181
CLASP1	23332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	122139824	122139824	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TGGGAGGGAGCGGTGGGGATG	0.522	11	11
BIN1	274	hgsc.bcm.edu;broad.mit.edu	37	2	127828379	127828379	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CTTCTGCAGCCGGGTGCCCTC	0.637	12	43
LCT	3938	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	136567270	136567270	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TTTTCCCAAACGACTTTAGCC	0.502	46	131
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	179465605	179465605	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ACAGTCACAGGGCCAACAGTG	0.448	44	135
SDPR	8436	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	192711355	192711355	+	Silent	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ACTTGGAGAGCTTGGTGAGGT	0.592	21	52
ANKRD44	91526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	197943464	197943464	+	Missense_Mutation	SNP	T	T	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GGCGGCAGCATAATGTATGCT	0.413	11	37
GK2	2712	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	80328975	80328975	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	AATTTTTTTACTAAGATCCTC	0.428	58	158
CDH9	1007	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	26881407	26881407	+	Silent	SNP	T	T	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	AGGCATACGTTGCCAGCGAAT	0.418	63	126
ZNF366	167465	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	71756221	71756221	+	Missense_Mutation	SNP	A	A	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCCGCACTCCACACAGATGTT	0.657	11	41
ARHGAP26	23092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	142526856	142526856	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	AATCCAAACAGCATCCTTAAT	0.473	45	109
MGAM	8972	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	141736692	141736692	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCTTAACATCCGCTATACTCT	0.532	93	302
ADAM7	8756	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	24350112	24350112	+	Splice_Site	SNP	T	T	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TGAGGAGAAGTAAGTGCCCTG	0.373	22	56
ADAM7	8756	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	24350563	24350563	+	Nonsense_Mutation	SNP	A	A	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CAGAGATGTCAGATGTGGAAA	0.448	13	62
MTERFD1	51001	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	97256197	97256197	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ACATTGTGCACAAAATCAAAC	0.403	27	83
EFR3A	23167	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	132971845	132971845	+	Missense_Mutation	SNP	C	C	G			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TTTAGATCATCACAAACTGTG	0.284	21	68
ADAMTSL1	92949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	18777565	18777565	+	Missense_Mutation	SNP	T	T	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CGCAGCCACCTGGAGCACCAG	0.647	6	13
ALDH1B1	219	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	38396064	38396064	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCTGCTGAACCGCCTGGCAGA	0.632	39	117
CDK5RAP2	55755	hgsc.bcm.edu;broad.mit.edu	37	9	123152041	123152041	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TCTGGCCTTCCGAAGGATTTT	0.517	6	66
DDX3X	1654	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	41204458	41204458	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	TGAAGCTGATCGGATGTTGGA	0.408	60	52
RGAG1	57529	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	109695334	109695334	+	Missense_Mutation	SNP	A	A	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CTCTGGAAAGATGTCCACGCC	0.507	66	63
SMARCA1	6594	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	128632026	128632026	+	Missense_Mutation	SNP	C	C	G	rs35325660		TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ACATCAATATCTTTCATCAGG	0.308	18	18
IKBKE	9641	broad.mit.edu;ucsc.edu	37	1	206647731	206647731	+	Missense_Mutation	SNP	C	C	T	rs143140330		TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCTGCGGCCCCGCGAGGTGCA	0.582	24	32
DNHD1	144132	broad.mit.edu;ucsc.edu	37	11	6588423	6588423	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ATGAAGCCACGTGAGATTAAT	0.577	43	112
DNAH11	8701	broad.mit.edu;ucsc.edu	37	7	21742356	21742356	+	Missense_Mutation	SNP	T	T	C			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CTTCGTGCTATTAAGTCTGTC	0.388	12	42
KRTAP21-2	337978	broad.mit.edu;ucsc.edu	37	21	32119504	32119504	+	Missense_Mutation	SNP	T	T	C	rs145167151		TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	GCAGTTTCTGTAGTAGTTGCA	0.468	48	108
ANKRD34A	284615	broad.mit.edu;ucsc.edu	37	1	145473827	145473827	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	ACCATCCCCAGGGGTGGAGGA	0.617	23	90
EFEMP2	30008	broad.mit.edu;ucsc.edu	37	11	65638766	65638766	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CACAAGTAGCCCCCGTAGTGG	0.647	36	140
OR10A5	144124	broad.mit.edu;ucsc.edu	37	11	6867517	6867517	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CTACGCCATCGTCGGAACCAT	0.512	50	131
PDGFRA	5156	broad.mit.edu	37	4	55161298	55161298	+	Missense_Mutation	SNP	G	G	C			TCGA-CS-4941-01A-01D-1468-08	TCGA-CS-4941-10A-01D-1468-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	003ed478-ceca-4752-8ae4-4cf12e6844bd	56e3b45b-55fa-4b7e-8998-920c8125aab1	CCAGCTCGCAGACCTCTGAAG	0.507	5	129
