Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
ANKRD1	27063	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	92678671	92678671	+	Missense_Mutation	SNP	A	A	G			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTTTTCTACTACTGGCAGTTT	0.343	19	18
TMEM180	79847	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	104233397	104233397	+	Silent	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GGGGCGTCTACGCGGTGGTGC	0.637	31	22
TACC2	10579	hgsc.bcm.edu;broad.mit.edu	37	10	123844064	123844064	+	Silent	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CCACTGTTCCCGAAGGAGCCA	0.582	4	2
MUC5B	727897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	1271606	1271606	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	ACTCCCTCCTCCAGTCCAGGG	0.642	60	91
OR5F1	338674	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	55761801	55761801	+	Missense_Mutation	SNP	T	T	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AAGAAGTACATCTGTAGGAAG	0.463	32	64
PDE2A	5138	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	72289381	72289381	+	Silent	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CCATGGCCTTCTCCTGCAGGC	0.582	27	38
OR2AT4	341152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	74800020	74800020	+	Missense_Mutation	SNP	T	T	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AGGTGGGAGCTGCAGGTGGAG	0.567	11	15
ACSM4	341392	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	7477158	7477158	+	Silent	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTGTTGAATCGGCTGTTGTCA	0.428	15	36
GUCY2C	2984	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	14809526	14809526	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTTTTCTGACGAAGTTCATAA	0.373	25	42
ALG5	29880	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	37569684	37569684	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTCTTCATGTCGATGGAGTGC	0.383	15	42
SYNE3	161176	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	95932397	95932397	+	Silent	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GGAGCACCGCCTGGTTGTCCA	0.637	23	35
ATP8B4	79895	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	50223421	50223421	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TCTGGGGTCCGGGATTTAAAA	0.398	17	26
MYO5A	4644	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	52622646	52622646	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTGACTGGTCGGATGGGTTCA	0.413	56	75
OR4F6	390648	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	102346763	102346763	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TATCACTCCCGTTTTGAATCC	0.343	23	29
SPNS1	83985	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	28995597	28995597	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CACCCGCGTGCCCGTGGCCAG	0.697	9	21
CHST4	10164	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	71570880	71570880	+	Silent	SNP	C	C	T	rs139260372		TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TGATACGGGCCGTCTTCTTGT	0.582	22	37
ACLY	47	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	40040509	40040509	+	Missense_Mutation	SNP	G	G	C			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CATGATCCATGAATGTGGAGC	0.438	20	28
EPN3	55040	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	48616618	48616618	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CACCATCAGCGGGACAGAGAG	0.597	18	32
CATSPERD	257062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	5727283	5727283	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CTCTAGGACCGCCTGTATTTT	0.338	29	75
SLC8A2	6543	hgsc.bcm.edu;ucsc.edu	37	19	47935494	47935494	+	Silent	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CGGTGCAGCCGAAGTGGGAGG	0.627	11	59
MYH14	79784	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	50750373	50750373	+	Silent	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CCCAGACTAAGGAACAGGTAG	0.597	8	21
SELE	6401	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	169698637	169698637	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	ACCTTTACACGTTGGCTTCTC	0.443	39	36
VSX1	30813	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	25057044	25057044	+	Silent	SNP	A	A	C			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AGCCATTCTCAGGGCTCACTT	0.542	34	64
GREB1	9687	hgsc.bcm.edu;broad.mit.edu	37	2	11725320	11725320	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CCCAAAAAACGCCACAAAGGG	0.512	14	14
CENPA	1058	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	27016113	27016113	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CAACTGGCCCGGAGGATCCGG	0.552	61	134
G6PC2	57818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	169764413	169764413	+	Missense_Mutation	SNP	T	T	G			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GCTCTGTGCCTTGACCTCATT	0.473	43	78
GPR55	9290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	231774733	231774733	+	Silent	SNP	C	C	T	rs146835586		TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CCCGGGAGATCGTGGTGTCCT	0.552	33	42
COL6A3	1293	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	238275437	238275437	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GTTGCCCACGCGGAACGCTGT	0.547	31	52
GPR98	84059	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	90136725	90136725	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CAACAGAGTGCTCCATACCAT	0.423	16	25
PCDH12	51294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	141335542	141335542	+	Missense_Mutation	SNP	A	A	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CCGAGTCTGCATCTCTTGCCA	0.582	9	15
SH3TC2	79628	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	148411245	148411245	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GGCAGAGTTCCTGCTCCTGCA	0.522	17	17
GRIA1	2890	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	153056693	153056693	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TGGGGCCAAGGGATCGACATC	0.537	5	15
TENM2	57451	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	167671581	167671581	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AGCTGTCAACGTGTCATACTT	0.597	28	39
GABRP	2568	hgsc.bcm.edu;ucsc.edu	37	5	170232777	170232777	+	Missense_Mutation	SNP	G	G	A	rs112704076	byFrequency	TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GACTCTGTGCGTGGACTGGAA	0.522	22	23
HLA-DMB	3109	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	32906668	32906668	+	Missense_Mutation	SNP	T	T	G			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTGAAGGAGATGCAGTATGTG	0.527	21	54
LAMA4	3910	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	112469437	112469437	+	Missense_Mutation	SNP	G	G	C			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CAGTTGGTTAGATTGTTGGCC	0.517	29	7
TCTE3	6991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	170144257	170144257	+	Silent	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTAATTTTGCCAGGGCACTCT	0.373	18	26
DYNC1I1	1780	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	95657632	95657632	+	Splice_Site	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GCTGCACACACGGTAATGCAA	0.493	27	58
LAMB1	3912	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	107616242	107616242	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TCATCACACACGCCTCCGCTG	0.517	25	61
DOCK5	80005	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	25198440	25198440	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AATTCAATTCGCCAGTTATTT	0.398	9	9
ASAP1	50807	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	131149272	131149272	+	Missense_Mutation	SNP	G	G	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AACTTGGCTGGTTGCCTGTTA	0.448	31	43
MAMDC2	256691	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	72724721	72724721	+	Splice_Site	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TACTGTATTGGTAAGTGGGCT	0.368	48	52
GOLGA2	2801	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	131022430	131022430	+	Silent	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CGTGCTGCTCCGACTGCAGTG	0.592	35	51
FAM47B	170062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	34961315	34961315	+	Missense_Mutation	SNP	G	G	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GGAAGTGGAAGCCCAGCTGAT	0.537	33	19
MAGEB16	139604	hgsc.bcm.edu;broad.mit.edu	37	X	35820491	35820491	+	Missense_Mutation	SNP	A	A	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TAAGGCAGAGAGTCCTCTTGA	0.532	9	1
DDX26B	203522	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	134706886	134706886	+	Silent	SNP	G	G	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AAATCACAGGGGAAACTGCAC	0.353	30	9
SPANXN2	494119	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	142795437	142795437	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TCCTCTTGGACGGGATTGATG	0.453	141	17
SLC23A2	9962	broad.mit.edu;ucsc.edu	37	20	4850643	4850643	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CTGGCGACCACGGCACTGAGC	0.602	27	51
OR1N1	138883	broad.mit.edu;ucsc.edu	37	9	125289214	125289214	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GGCCACATAGCGGTCATACGC	0.512	4	29
HOXB5	3215	broad.mit.edu;ucsc.edu	37	17	46670842	46670842	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CTCGCCCACCGCCCCAAAGTG	0.687	5	15
COL1A1	1277	broad.mit.edu;ucsc.edu	37	17	48270361	48270361	+	Silent	SNP	G	G	A	rs72651616		TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TTACGACAGCGCCAGGGGGTC	0.627	5	16
TTC21A	199223	broad.mit.edu;ucsc.edu	37	3	39179140	39179140	+	Missense_Mutation	SNP	G	G	C			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	GACATTTACTGCCAGGGCAGC	0.607	3	13
FCHSD1	89848	broad.mit.edu;ucsc.edu	37	5	141028985	141028985	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TGCTCCTTGGCGCTCCGCCCT	0.612	73	151
KCNS3	3790	broad.mit.edu;ucsc.edu	37	2	18113040	18113040	+	Silent	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AAAACCCTCTGAACATCATTG	0.512	37	51
ITPR1	3708	broad.mit.edu;ucsc.edu	37	3	4819013	4819013	+	Silent	SNP	C	C	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	TCAATGATATCAATCCTTTGG	0.423	6	8
USH2A	7399	broad.mit.edu;ucsc.edu	37	1	216251647	216251647	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AGATCCACTTGTGTAAAGGCA	0.348	131	188
CACNA1S	779	broad.mit.edu;ucsc.edu	37	1	201047161	201047161	+	Missense_Mutation	SNP	G	G	A	rs9333651		TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	AAGTACTGGCGCAGGCCCAGC	0.582	26	38
NLRP9	338321	broad.mit.edu;ucsc.edu	37	19	56244617	56244617	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CTGGTCTCTGCGATACCGTTC	0.453	4	29
SEC23B	10483	broad.mit.edu;ucsc.edu	37	20	18516372	18516372	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CS-6186-01A-12D-2024-08	TCGA-CS-6186-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	91b92f9a-17de-4940-98ba-3c772a83371a	111cd7bb-0da5-485d-9b1f-978a60a29b94	CATCTATTTTGAAGTTGTCAA	0.433	4	27
