Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
KIF20B	9585	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	91498265	91498265	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGTAAAGGAACTCAAGCTGAA	0.299	19	26
CABP2	51475	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	67287316	67287316	+	Silent	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GGAGGATCTCGTCCACCTCCC	0.667	20	65
GPC5	2262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	92101015	92101015	+	Splice_Site	SNP	G	G	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGTGTTCCAGGACCTGATCTT	0.413	22	53
ACIN1	22985	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	23550990	23550990	+	Silent	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TTTCTCCTTTCCTTGGTTTCT	0.388	39	80
AK7	122481	hgsc.bcm.edu;broad.mit.edu	37	14	96875258	96875258	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GACTTGGGCGCGCTCCAAAGC	0.473	6	76
PLA2G4D	283748	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	42371771	42371771	+	Silent	SNP	C	C	G			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CTAGCGCCCACAGGTCCACAA	0.701	11	21
CDYL2	124359	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	80646582	80646582	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GGCGTGAGGCGGATGGTGGCG	0.657	37	93
MYOCD	93649	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	12656007	12656007	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CCTGTCAGTCGCTGGGTCCCT	0.627	37	75
HGS	9146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	79657241	79657241	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CAAAGAGAGCGATGCCATGTT	0.617	45	88
ZNF555	148254	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	2852903	2852903	+	Silent	SNP	C	C	T	rs148620935		TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CACACACTGGCGAGAAGCCAT	0.408	25	58
CEP89	84902	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	33392199	33392199	+	Missense_Mutation	SNP	T	T	C			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGCTTTGTTTTGCTCTGTCAA	0.408	37	145
GPATCH1	55094	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	33608853	33608853	+	Silent	SNP	A	A	G			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AGGATGAGCAAGGTGACAGTG	0.537	26	59
LILRA2	11027	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55087420	55087420	+	Missense_Mutation	SNP	C	C	G			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CCCACTGCATCTGAGATCAGA	0.587	37	105
NOTCH2	4853	hgsc.bcm.edu;broad.mit.edu	37	1	120502127	120502127	+	Splice_Site	SNP	T	T	C			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AATTAACCCCTGGAAGAGAAA	0.403	14	42
NUP210L	91181	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	154062057	154062057	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	ATTTCCAATTCGGAATGTGAG	0.423	45	80
OR2T8	343172	hgsc.bcm.edu;broad.mit.edu	37	1	248084419	248084419	+	Silent	SNP	T	T	C			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GAGTATCGTTTTGACCTCCCT	0.488	31	73
OR2L8	391190	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	248112252	248112252	+	Silent	SNP	T	T	C			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TTCTCATTGTTTTCATTTTCC	0.393	77	164
RIPK4	54101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	43161015	43161015	+	Missense_Mutation	SNP	G	G	A	rs140909597		TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TTGCTTCGCCGCAGGAGCGTG	0.667	16	33
HJURP	55355	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	234750376	234750376	+	Missense_Mutation	SNP	C	C	G			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TTAAACCTGTCTTACGGCAAG	0.443	21	41
TRA2B	6434	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	185639892	185639892	+	Missense_Mutation	SNP	A	A	C			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	ATCAAGCTCCATTCCATTGGC	0.408	12	54
NCAPG	64151	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	17843981	17843981	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AGGTGTCAGACTGCTGAAGCC	0.353	17	30
FDCSP	260436	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	71096961	71096961	+	Missense_Mutation	SNP	G	G	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GTGGCTGTTGGTTTCCCAGTA	0.378	55	120
ADAMTS12	81792	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	33648939	33648939	+	Silent	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CTACTTCCTGGCAGAAGGTAG	0.473	29	124
SHROOM1	134549	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	132159379	132159379	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GTCAAGCACAGGGTGGGTGGC	0.612	40	100
PCDHA4	56144	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	140188796	140188796	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AGTGGACAGGCGCCAAAGGCC	0.657	17	79
SLC36A2	153201	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	150704990	150704990	+	Missense_Mutation	SNP	C	C	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GGGCATTCTTCATCTTGTTTT	0.468	24	52
FAT2	2196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	150922417	150922417	+	Silent	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGGTGGATTCGTGGTCCATGG	0.512	50	122
ATP10B	23120	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	160047525	160047525	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGGGGCAGGCGCACAGTCACC	0.617	16	42
DSP	1832	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	7571618	7571618	+	Silent	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CCTTTCAGCTGAAAACAATGC	0.453	126	244
DSP	1832	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	7571689	7571689	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GAGTTCATCAGAAATAGCCAA	0.453	95	186
HLA-F	3134	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	29693049	29693049	+	Silent	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	ATGTGCAGCACGAGGGGCTGC	0.597	24	67
CRISP3	10321	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	49701500	49701500	+	Missense_Mutation	SNP	G	G	C			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	ACCAGCTTTGGATTGCTTGTG	0.433	49	99
BAI3	577	hgsc.bcm.edu;broad.mit.edu	37	6	70048901	70048901	+	Silent	SNP	C	C	T	rs138734026		TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CCGCCAGTAACGCCATGTTAG	0.398	52	151
LACE1	246269	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	108768486	108768486	+	Missense_Mutation	SNP	A	A	G			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGCTGCAGGAAAACTCTACTA	0.328	26	46
CDC40	51362	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	110533410	110533410	+	Missense_Mutation	SNP	A	A	G	rs147439944	byFrequency	TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TCTACGGTCAACTATGCCACC	0.383	38	54
COL1A2	1278	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	94043557	94043557	+	Silent	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CCTCAGGTCCCGCTGGTGAAG	0.428	14	55
LRRC17	10234	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	102574365	102574365	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GTCAGGATGCGTGTGGTTACC	0.493	14	25
RELN	5649	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	103338477	103338477	+	Silent	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	ATTGGACATTCTCCCCTTTGG	0.458	66	188
RAB11FIP1	80223	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	37729419	37729419	+	Silent	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TTTCATCATCCGATGCGACTT	0.453	42	97
EPPK1	83481	hgsc.bcm.edu;broad.mit.edu	37	8	144942253	144942253	+	Silent	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CCTTGGTGTCGTCGCTGGGGT	0.657	50	94
PALM2-AKAP2	445815	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	112900626	112900626	+	Silent	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AAGAATCTGACGTGATGGTTG	0.547	13	43
VPS11	55823	broad.mit.edu;ucsc.edu	37	11	118941054	118941054	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	ATTGGCCTTTCGCCAAGCAGG	0.517	13	23
KRT19P2	160313	broad.mit.edu;ucsc.edu	37	12	95228505	95228505	+	RNA	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	TGAGTGACAGGCAAAGCCAAT	0.552	8	5
SLC2A3	6515	broad.mit.edu;ucsc.edu	37	12	8083869	8083869	+	Missense_Mutation	SNP	C	C	T			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AACAACGATGCCCAGCTGGTT	0.488	26	104
RP11-64J4.2	0	broad.mit.edu;ucsc.edu	37	17	3213993	3213993	+	RNA	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CTGGCCATCTGCCAGTCCCTC	0.562	42	80
HERC2P3	283755	broad.mit.edu;ucsc.edu	37	15	20644046	20644046	+	RNA	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CAGGGTTCTCGGAATCAGGGA	0.597	16	20
OLFM1	10439	broad.mit.edu;ucsc.edu	37	9	137998621	137998621	+	Missense_Mutation	SNP	G	G	A			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	GGGCATCAGTGACCCCGTGAC	0.637	9	25
PIK3R1	5295	broad.mit.edu;hgsc.bcm.edu	37	5	67589632	67589634	+	In_Frame_Del	DEL	ATT	ATT	-			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	AATATGATAGATTATATGAAGAA	0.291	14	50
FAM135B	51059	broad.mit.edu;hgsc.bcm.edu	37	8	139158292	139158292	+	Splice_Site	DEL	C	C	-			TCGA-CS-6188-01A-11D-1893-08	TCGA-CS-6188-10A-01D-1893-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	adacd0a6-53f0-46c1-9f59-e30cb1b56164	1026b480-665c-4646-8fec-982cc07dca1e	CTGCACTGTTCCCTAAAAATG	0.448	32	97
