Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
GPAM	57678	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	113919721	113919721	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GGCCGCCTTCCGCACCAGCTG	0.547	8	37
DMBT1	1755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	124357525	124357525	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGCATCGACAGTAGGTAAATA	0.463	21	66
OR2AG2	338755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	6789861	6789861	+	Missense_Mutation	SNP	C	C	T	rs146279135	byFrequency	TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGGTCCTCAGCGCTACCCATT	0.522	16	29
GYLTL1B	120071	hgsc.bcm.edu;broad.mit.edu	37	11	45950277	45950277	+	Missense_Mutation	SNP	C	C	T	rs148029391	byFrequency	TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCCCACCTATCGTGACTGCCT	0.637	4	62
OR5M3	219482	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	56237501	56237501	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGTCCATAATGTTGCTGCCAG	0.428	28	98
GANAB	23193	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	62400106	62400106	+	Silent	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGCCCAAGTCGCGATGAGGGT	0.532	52	145
MMP3	4314	hgsc.bcm.edu;ucsc.edu	37	11	102713447	102713447	+	Silent	SNP	G	G	A	rs41380244	byFrequency	TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGCCAGGAAAGGTTCTGAAGT	0.478	10	41
OR6M1	390261	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	123676272	123676272	+	Silent	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCAGTGAGGAGTTCTGATTGG	0.498	11	35
KLRF1	51348	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	9995006	9995006	+	Silent	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GGACTTGGGTGGATGGTTCTC	0.358	13	69
CUX2	23316	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	111748299	111748299	+	Silent	SNP	C	C	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AACACAACATCGGGCAGCGGG	0.677	29	62
MAPKAPK5	8550	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	112321472	112321472	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CAGCCGGACTATCCCAAAGGA	0.468	26	138
TRIM13	10206	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	50586329	50586329	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GTATAACAAGATCAAGATCTC	0.438	54	28
CDH24	64403	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	23523984	23523984	+	Silent	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGAAGAAAGGCAGTCCATCCA	0.597	12	25
NFATC4	4776	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	24839464	24839464	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGTCCCGCCGTGGCAGCCTG	0.706	18	20
ACOT4	122970	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	74060453	74060453	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TATTGGAGGGGGCCTCTTGGA	0.428	21	61
AHNAK2	113146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	105408008	105408008	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TCCGTCTCCACGCTGGGCAGA	0.642	33	91
NPAP1	23742	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	24924470	24924470	+	Nonsense_Mutation	SNP	T	T	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GACATGTCTGTTTCCAACTTC	0.428	16	80
TJP1	7082	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	30058630	30058630	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CACACCACTCCGGCCACTTCT	0.468	23	73
ITPRIPL2	162073	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	19126381	19126381	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCCAGCGCTGGCCCCGGCCTT	0.706	11	29
SDR42E1	93517	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	82034402	82034402	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TTACCGAAAACCAAAATAGCC	0.383	15	60
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7578394	7578394	+	Missense_Mutation	SNP	T	T	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCAGCGCTCATGGTGGGGGCA	0.642	37	9
MFSD6L	162387	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	8701438	8701438	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CACCAGTAAGGCCAGGGTGCT	0.597	5	40
WFIKKN2	124857	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	48917362	48917362	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GGCCGGCCCCGGCCTGAGATC	0.622	7	47
HSF5	124535	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	56540259	56540259	+	Missense_Mutation	SNP	G	G	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCAGATTCCTGTATTGTGCTA	0.468	87	84
CSH1	1442	hgsc.bcm.edu;broad.mit.edu	37	17	61972426	61972426	+	Missense_Mutation	SNP	G	G	A	rs139446025	byFrequency	TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGCACCATGCGCAGGAATGTC	0.582	19	126
EVPL	2125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	74003589	74003589	+	Silent	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGGCCTTCTGGGCGTTAAGCA	0.652	15	113
JMJD6	23210	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	74716489	74716489	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGGAAGAGTCGCTGGAGCTG	0.582	10	77
RIOK3	8780	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	21047458	21047458	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GTACAGGAAAGGAGTCTGTTG	0.368	10	84
HRH4	59340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	22056724	22056724	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TCTTATAGAACTCAACATACT	0.378	12	105
GALNT1	2589	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	33257583	33257583	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TCCAGATAATCTTCCTACAAC	0.388	17	125
ABCA7	10347	hgsc.bcm.edu;broad.mit.edu	37	19	1042063	1042063	+	Splice_Site	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGTCCCCAGGGTCTCCCGGC	0.711	3	11
OR7G3	390883	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	9237223	9237223	+	Missense_Mutation	SNP	A	A	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GGGGTTCATGATGACATTGTA	0.488	18	82
ZNF30	90075	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	35434793	35434793	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AAGCATCAGAGAATTCATACT	0.448	39	66
BCAT2	587	hgsc.bcm.edu;ucsc.edu	37	19	49300580	49300580	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AACACGGTGGGCCCATAATTC	0.627	90	36
SCAF1	58506	hgsc.bcm.edu;broad.mit.edu	37	19	50156700	50156700	+	Silent	SNP	A	A	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGGGGTCCGAGGTGGGGCgg	0.657	196	7
C19orf48	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	51301536	51301536	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GGAAGCCCTTGGTAGCCCACT	0.647	25	145
C19orf48	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	51301602	51301602	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCACTGGGTTGGGTCCCAGCA	0.642	25	141
PRPF31	26121	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	54629912	54629912	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GGATCTGCGGCGGAAAGCGGC	0.617	6	23
PTPRH	5794	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55710148	55710148	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCTGGGGTCAGTCATGCCTTC	0.592	10	32
PRAMEF2	65122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	12918902	12918902	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGGAGCTGGCGGGGCAGAGC	0.567	31	178
MACF1	23499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	39815264	39815264	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCAGCAGGATCTCTCTGCTTT	0.498	15	119
ACOT11	26027	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	55072901	55072901	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCAGGACTTCGTGATCCTGGC	0.627	11	70
POLR3GL	84265	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	145457015	145457015	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	cttcatcatactcttcttctt	0.478	7	25
FLG	2312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	152284454	152284454	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GATCCACGATGGTTTCTGGAA	0.582	64	474
BLZF1	8548	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	169347582	169347582	+	Silent	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATCGTGAGTTAAAAAAGTTAC	0.343	60	129
CACNA1E	777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	181684510	181684510	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AAAAATGCTGGAACATCCGCC	0.373	5	12
PLA2G4A	5321	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	186934577	186934577	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GAGCCTCTGGATGTCAAAAGT	0.353	14	78
IKBKE	9641	hgsc.bcm.edu;broad.mit.edu	37	1	206649566	206649566	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATTGTGCATCGCGACATCAAG	0.622	5	73
OR2M5	127059	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	248309136	248309136	+	Silent	SNP	A	A	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TTCACATGGGATCTGGAGAGG	0.443	55	345
OR2T4	127074	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	248525025	248525025	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATCCTGTTGGGACTCTTCAGA	0.458	26	166
ZBTB21	49854	hgsc.bcm.edu;broad.mit.edu	37	21	43411516	43411516	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCTTCTTTGGGGGCTGTGCTG	0.562	5	75
BCL2L13	23786	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	18185020	18185020	+	Silent	SNP	T	T	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TTTTGGTGCCTCTGGTTTTGC	0.363	12	99
CPT1B	1375	hgsc.bcm.edu;broad.mit.edu	37	22	51011381	51011381	+	Silent	SNP	G	G	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CATAGGAGTAGGATTCCTCAT	0.602	5	72
CCT7	10574	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	73466844	73466844	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGTAACATCAGTGCCTGCCAG	0.488	7	24
EDAR	10913	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	109546658	109546658	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GTTCTCACCGCAGTTTGAGTA	0.602	5	38
CCDC148	130940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	159201746	159201746	+	Missense_Mutation	SNP	G	G	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TTCAGCCTCTGGTATTCCTGC	0.383	26	133
IDH1	3417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	209113112	209113112	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATAAGCATGACGACCTATGAT	0.393	22	47
SLC4A3	6508	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	220497018	220497018	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATGCTGGACCGCAGCCAGGAG	0.667	6	39
SACM1L	22908	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	45744968	45744968	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GAAGCTTGTGATGATGGAGCA	0.358	19	63
GAK	2580	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	861174	861174	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CAGACTCGCTCTCCTTGGAAG	0.587	19	95
PPP2R2C	5522	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	6325273	6325273	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTTGGTGTTCCGATCGAACAT	0.642	6	44
TLR10	81793	hgsc.bcm.edu;broad.mit.edu	37	4	38776590	38776590	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATTCCATCACGCAAAAGAACC	0.338	8	83
TBCK	93627	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	106967769	106967769	+	Missense_Mutation	SNP	T	T	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGTTGGCTTTATTTTATTAA	0.408	12	25
CLPTM1L	81037	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	1330403	1330403	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ACCTCAATGGCGGCTCCAACA	0.622	13	91
CDH12	1010	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	21817163	21817163	+	Missense_Mutation	SNP	A	A	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATTTTGTCCAAAATCAGGATC	0.388	23	88
APC	324	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	112176714	112176714	+	Missense_Mutation	SNP	A	A	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TTCTCAGACAACAAAGATTCA	0.313	7	36
FBN2	2201	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	127730892	127730892	+	Missense_Mutation	SNP	T	T	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCACTGCATTTTCGTCATTCT	0.547	6	26
FLT4	2324	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	180043382	180043382	+	Silent	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCTTGCGGACGTAGTCGGGGT	0.597	13	53
DNAH8	1769	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	38690922	38690922	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTCCAGATACCGCCGGAGTAT	0.488	27	28
CYTH3	9265	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	6217518	6217518	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGGAACTGGGCGACGTCTTCT	0.463	16	75
TTC26	79989	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	138863316	138863316	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCCAAAGCTGCAACAGGCAAT	0.368	10	67
SSPO	23145	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	149474867	149474867	+	RNA	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ACCTGCTGGCGGGTGCTGCGG	0.682	6	12
MTMR7	9108	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	17218649	17218649	+	Missense_Mutation	SNP	T	T	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TTCACATCGCTGAGCTGCCAG	0.473	30	53
ADAM2	2515	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	39695695	39695695	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGAAACAAGACGCGCCACATG	0.612	5	34
OC90	729330	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	133044199	133044199	+	Silent	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CAAATTCCTCCGGGCACCGGG	0.547	13	49
GSDMD	79792	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	144641509	144641509	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CAGGAGCATGGGGTCGGCCTT	0.627	11	27
MPDZ	8777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	13138059	13138059	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GTCTTTGTTCCCAGCAAGACT	0.448	12	69
MPDZ	8777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	13138080	13138080	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TAGGCCCAAACCACTATGACC	0.438	9	73
IFNA5	3442	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	21304957	21304957	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGTCTCATCCCAAGTAGCAGA	0.483	39	226
TAF1L	138474	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	32634394	32634394	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGATTTTATCACAGGTTCATG	0.458	42	229
NUP188	23511	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	131745580	131745580	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGGTTAACGACAGTGATCTCC	0.448	19	151
USP20	10868	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	132631651	132631651	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CGTCATCTCAGACATCTTTGA	0.652	49	151
CRLF2	64109	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	1321390	1321390	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CACGTGCTTCGGGGAACTGGG	0.542	24	141
CNKSR2	22866	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	21627466	21627466	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGGCGGCAGTCTACCCTGCCA	0.547	27	69
FAM47B	170062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	34961870	34961870	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GTCCCATCTCCGCCCAGAGCC	0.632	29	79
XK	7504	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	37553613	37553613	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ACCAAGAAGAGGCAAATGCCA	0.468	7	25
AKAP4	8852	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	49958081	49958081	+	Missense_Mutation	SNP	T	T	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GACCAAGCGCTTCAGCATGGC	0.478	40	105
MED12	9968	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	70345937	70345937	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCCTTCCCCACTGCTGAAGAT	0.552	19	98
NKAP	79576	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	119070601	119070601	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGAAGTAGTGCTTTTCTTTGG	0.294	16	53
TENM1	10178	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	123525989	123525989	+	Silent	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCATTTTTTCATTCCACGTTC	0.393	23	56
DDX26B	203522	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	134709030	134709030	+	Missense_Mutation	SNP	T	T	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGTGTTCCAGTTGCACAAATG	0.413	26	107
GPR112	139378	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	135430980	135430980	+	Missense_Mutation	SNP	G	G	C			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CAACTCAACAGTCATCACAAG	0.458	26	175
MAGEC2	51438	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	141290652	141290652	+	Nonstop_Mutation	SNP	T	T	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATCCTAGACTTCACTCAGAAA	0.502	20	77
MAGEA3	4102	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	151935721	151935721	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCTGAAGATCACAGGAAAGAA	0.517	83	108
OPN1LW	5956	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	153416330	153416330	+	Silent	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGACCGTCATCGCCAGCACTA	0.597	26	99
G6PD	2539	hgsc.bcm.edu;broad.mit.edu	37	X	153760890	153760890	+	Silent	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TGGGCTGCACGCGGATCACCA	0.612	24	68
SPTBN4	57731	broad.mit.edu;ucsc.edu	37	19	41066266	41066266	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCTCTCCTGGATGGATGGCAT	0.667	13	78
PLAU	5328	broad.mit.edu;ucsc.edu	37	10	75675025	75675025	+	Silent	SNP	G	G	A			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	ATCTCTATCCGGAGCAGCTGA	0.512	23	93
DISP2	85455	broad.mit.edu;ucsc.edu	37	15	40656103	40656103	+	Missense_Mutation	SNP	C	C	A	rs150939222		TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCCCTCACAGCGCGATGGGAC	0.657	6	48
KIAA1522	57648	broad.mit.edu;ucsc.edu	37	1	33236713	33236713	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CCCCTCAGACCGCTCTGGGCC	0.617	17	156
BRPF1	7862	broad.mit.edu;ucsc.edu	37	3	9781283	9781283	+	Silent	SNP	C	C	T			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	GCATCCAGTGCCACAAGGCCA	0.572	18	59
LPA	4018	broad.mit.edu;ucsc.edu	37	6	161027642	161027642	+	Silent	SNP	A	A	G			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	TATAACAATAAGGGGCTGCCA	0.522	84	130
TCHHL1	126637	broad.mit.edu;hgsc.bcm.edu	37	1	152060485	152060485	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGCTCACCTGAAAAAAGTCCC	0.453	97	243
RBBP6	5930	broad.mit.edu;hgsc.bcm.edu	37	16	24581321	24581321	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	AGAAACAAAACCAGTCAAAGA	0.368	20	30
LONRF3	79836	broad.mit.edu;hgsc.bcm.edu	37	X	118148199	118148199	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DU-7010-01A-11D-2024-08	TCGA-DU-7010-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a4e22253-010a-405d-bc82-72650f53d116	377d128d-3e55-4b68-941c-52cde4be5eaf	CTGAGCTCATGGGATTACATA	0.438	59	244
