Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
PLAC9	219348	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	81901857	81901857	+	Silent	SNP	T	T	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CCTTCAGCCCTCCGCGAGGAG	0.532	10	57
OR4S2	219431	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	55419308	55419308	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GAGGCTAAAGGGAAATAGTTG	0.363	62	90
FAT3	120114	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	92624025	92624025	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AACGGATTTGGTGGGCCCGCC	0.582	23	40
TUBGCP3	10426	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	113181323	113181323	+	Silent	SNP	A	A	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GATCATGACAAACTTGGTGCA	0.398	9	42
DLGAP5	9787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	55643912	55643912	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AGGTGCAAAGGAATTCTTCCC	0.383	19	13
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7578394	7578394	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GCAGCGCTCATGGTGGGGGCA	0.642	74	9
MYO15A	51168	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	18022907	18022907	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GGCGGGCCTCGGCCCCTACAG	0.652	41	68
VEZF1	7716	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	56060673	56060673	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GGTTTCTGATCAGGGGGCTCC	0.473	77	94
DNAI2	64446	hgsc.bcm.edu;broad.mit.edu	37	17	72301394	72301394	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GCAGGGCATCGTCATCTCCTG	0.577	11	111
NUDT19	390916	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	33183087	33183087	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GACCGCTCGGCGGACTGGCTG	0.751	9	36
CROCC	9696	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	17264170	17264170	+	Missense_Mutation	SNP	G	G	C	rs141704732		TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GAAGCGTCTTGAGAAGCAGAA	0.572	6	34
FCRL5	83416	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	157514077	157514077	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AGGATCTCGGGCTGTCAGATA	0.512	134	155
PTGS2	5743	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	186643728	186643728	+	Silent	SNP	A	A	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GAGAACATATAACATTACCCA	0.458	21	111
LAD1	3898	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	201352455	201352455	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CCGTATGGCCGTGTGGTATCT	0.597	70	201
RYR2	6262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	237804274	237804274	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TTGATTGACCTCTTGGGACGC	0.453	19	14
SPATA2	9825	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	48523042	48523042	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TGCCACTCGTGACATGGAGGC	0.672	18	51
SCUBE1	80274	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	43606074	43606074	+	Silent	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CCAGAACATCGCCGCACTCAT	0.632	47	16
GPR45	11250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	105858985	105858985	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CACGGTCCGCAAGAACGCCGT	0.672	23	67
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	179588855	179588855	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TGTGAAAGAGGGAGGAACTGC	0.423	13	8
DNAH7	56171	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	196749379	196749379	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CTTTGAGGATGTTTGCTCAGT	0.358	16	45
IDH1	3417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	209113112	209113112	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	ATAAGCATGACGACCTATGAT	0.393	28	26
ANKMY1	51281	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	241468460	241468460	+	Missense_Mutation	SNP	T	T	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TCACCTGAACTTGTAAGTTTG	0.522	26	124
NBEAL2	23218	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	47038035	47038035	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GTGGCCATCTTTCACGAAGCC	0.657	7	16
P2RY12	64805	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	151056104	151056104	+	Missense_Mutation	SNP	A	A	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TGATTTAAGGAAAGAGCATTT	0.368	22	54
RGS12	6002	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	3318009	3318009	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CACGCTTTCGGGACAGGCACC	0.637	19	184
FRYL	285527	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	48536663	48536663	+	Silent	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	ATAATCTGTAGTAATGATTGC	0.313	37	16
C4orf21	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	113475127	113475127	+	Missense_Mutation	SNP	C	C	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	ATTTTCTGAGCCAGCATGCAA	0.313	16	133
BBS12	166379	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	123664898	123664898	+	Silent	SNP	A	A	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AAGCCAGCACATACATTCAAC	0.363	16	45
TRIML2	205860	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	189018488	189018488	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CTTTCTAAAGAGTATTTTGCA	0.383	44	64
CDH9	1007	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	26881636	26881636	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GCCTTCATCGTTGTAGGTCAC	0.428	40	131
EGFLAM	133584	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	38338820	38338820	+	Silent	SNP	C	C	T	rs142461042		TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CTGAGGTTGGCGCAGATAAAT	0.532	27	29
SLC26A2	1836	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	149357883	149357883	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	ATGGTTGGCAGCACTGTAACC	0.353	49	39
PGK2	5232	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	49754106	49754106	+	Silent	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TATCTTTAACGATCTTGGCTC	0.418	26	143
RIMS1	22999	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	72967911	72967911	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TCACCGCTCACGTTCAGTATC	0.463	12	20
TTK	7272	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	80720598	80720598	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CACTAGAAATGCTGGAAATTG	0.348	22	44
CARD11	84433	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	2963945	2963945	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TTGGTGGGAGGAGGAGGAGGA	0.607	32	71
DBNL	28988	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	44097451	44097451	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TTCTGGGCCAAAGCAGAGGTG	0.547	27	46
TRIP6	7205	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	100465834	100465834	+	Silent	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	GGGGTCATGCGTCACGGCGAC	0.662	23	44
LRRC4	64101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	127668930	127668930	+	Silent	SNP	G	G	C	rs139849197		TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CTGATACACCGGACGGAgctg	0.547	20	23
PSD3	23362	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	18729531	18729531	+	Silent	SNP	T	T	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CACATCCCCCTGGGTGCTCTC	0.567	24	119
FUT10	84750	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	33246920	33246920	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AGAGGCTGGATTTTTCAGCTG	0.438	66	88
ADAM2	2515	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	39624672	39624672	+	Splice_Site	SNP	T	T	C			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AAGCTCTTACTAGACAGTTTT	0.343	80	88
FPGS	2356	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	130569293	130569293	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	ATCCGCATCAATGGGCAGCCC	0.657	40	151
ZER1	10444	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	131503855	131503855	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TTGAAATTGAGGAACATCTCG	0.567	39	187
ATRX	546	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	76940500	76940500	+	Splice_Site	SNP	T	T	G			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	AAAGCAATTCTATTAAAAGAA	0.294	47	5
ACTRT1	139741	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	127185376	127185376	+	Silent	SNP	G	G	T			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	CTGGGCTGTGGATGCCCAGCT	0.512	49	30
OR51D1	390038	broad.mit.edu;ucsc.edu	37	11	4661741	4661741	+	Missense_Mutation	SNP	C	C	A			TCGA-HT-7477-01B-11D-A289-08	TCGA-HT-7477-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	e4c150f7-c19e-4f15-b67f-67af9eb7f46c	60866491-f68b-4adc-9d4e-3d5241788660	TGTTTTGGAGCTGTCCTCTCG	0.512	17	38
