Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	ACHILLES_Top_Genes	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
PRAMEF2	65122	broad.mit.edu	37	1	12921604	12921604	+	Silent	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:12921604T>A	uc001aum.1	+	4	1482	c.1395T>A	c.(1393-1395)TCT>TCA	p.S465S		NM_023014	NP_075390	O60811	PRAM2_HUMAN	PRAME family member 2	465											0	Ovarian(185;0.249)	Renal(390;0.000469)|Lung NSC(185;0.00143)|all_lung(284;0.00181)|Colorectal(325;0.00215)|Breast(348;0.00224)|Myeloproliferative disorder(586;0.0393)|Hepatocellular(190;0.0623)|Ovarian(437;0.0731)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00812)|Colorectal(212;2.4e-06)|Kidney(185;4.89e-05)|COAD - Colon adenocarcinoma(227;0.000152)|KIRC - Kidney renal clear cell carcinoma(229;0.000194)|BRCA - Breast invasive adenocarcinoma(304;0.000293)|STAD - Stomach adenocarcinoma(313;0.0072)|READ - Rectum adenocarcinoma(331;0.0649)		CATCACCGTCTGAGGAACTGG	0.542			NA											13	25					0	0	0.008871	0	0
ARID1A	8289	broad.mit.edu	37	1	27106648	27106648	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:27106648G>A	uc001bmv.1	+	20	6632	c.6259G>A	c.(6259-6261)GGA>AGA	p.G2087R	ARID1A_uc001bmu.1_Missense_Mutation_p.G1870R|ARID1A_uc001bmx.1_Missense_Mutation_p.G933R|ARID1A_uc009vsm.1_Missense_Mutation_p.G415R|ARID1A_uc009vsn.1_Missense_Mutation_p.G329R	NM_006015	NP_006006	O14497	ARI1A_HUMAN	AT rich interactive domain 1A isoform a	2087	LXXLL.				androgen receptor signaling pathway|chromatin-mediated maintenance of transcription|estrogen receptor signaling pathway|glucocorticoid receptor signaling pathway|nervous system development|nucleosome mobilization|transcription, DNA-dependent	nBAF complex|npBAF complex|SWI/SNF complex	DNA binding|protein binding			ovary(124)|pancreas(5)|central_nervous_system(3)|endometrium(3)|kidney(3)|skin(2)|upper_aerodigestive_tract(1)|lung(1)	142		all_cancers(24;6.36e-27)|all_epithelial(13;5.93e-24)|Colorectal(325;3.46e-05)|all_lung(284;4.76e-05)|Lung NSC(340;5.83e-05)|Breast(348;9.7e-05)|Renal(390;0.0007)|Ovarian(437;0.00473)|Myeloproliferative disorder(586;0.0255)|all_neural(195;0.0381)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0178)|all cancers(4;2.61e-56)|Epithelial(14;7.53e-55)|OV - Ovarian serous cystadenocarcinoma(117;4.5e-30)|Colorectal(126;2.07e-09)|COAD - Colon adenocarcinoma(152;4.29e-07)|BRCA - Breast invasive adenocarcinoma(304;4.13e-05)|STAD - Stomach adenocarcinoma(196;0.000279)|KIRC - Kidney renal clear cell carcinoma(1967;0.000794)|GBM - Glioblastoma multiforme(114;0.0132)|READ - Rectum adenocarcinoma(331;0.0469)|Lung(427;0.167)|LUSC - Lung squamous cell carcinoma(448;0.242)		TGTCCTGGACGGACTCCTACA	0.592			NA	Mis|N|F|S|D		clear cell ovarian carcinoma|RCC								32	38					0	0	0.009535	0	0
ASB17	127247	broad.mit.edu	37	1	76397612	76397612	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:76397612A>G	uc001dhe.1	-	1	505	c.365T>C	c.(364-366)GTT>GCT	p.V122A	ASB17_uc001dhf.1_RNA	NM_080868	NP_543144	Q8WXJ9	ASB17_HUMAN	ankyrin repeat and SOCS box-containing 17	122					intracellular signal transduction					ovary(1)	1						TCTGTCTTGAACATAGTCTTT	0.343			NA											3	54					0	0	0.004672	0	0
NBPF9	400818	broad.mit.edu	37	1	144815953	144815953	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:144815953A>G	uc009wig.1	+	12	1400	c.1324A>G	c.(1324-1326)AAT>GAT	p.N442D	NBPF9_uc010oxn.1_Intron|NBPF9_uc010oxo.1_Missense_Mutation_p.N442D|NBPF9_uc010oxr.1_Intron|NBPF9_uc010oxt.1_Intron|NBPF9_uc001ekg.1_Intron|NBPF9_uc001ekk.1_Intron|NBPF10_uc009wir.2_Intron|NBPF9_uc010oyd.1_Intron|NBPF9_uc010oye.1_Intron|NBPF9_uc001eli.3_RNA|NBPF9_uc010oyf.1_Intron|NBPF9_uc010oyg.1_Intron|NBPF9_uc009wii.1_Missense_Mutation_p.N171D|PDE4DIP_uc001elk.1_Intron|PDE4DIP_uc001ell.1_Intron|PDE4DIP_uc001elm.3_Intron|PDE4DIP_uc001eln.3_Intron|PDE4DIP_uc001elo.2_Intron|NBPF9_uc001elp.2_Missense_Mutation_p.N102D	NM_001037675	NP_001032764	Q3BBV1	NBPFK_HUMAN	hypothetical protein LOC400818	442	NBPF 2.					cytoplasm					0						CAACGATGACAATGAAGATGT	0.423			NA											16	249					0	0	0.004007	0	0
MTMR11	10903	broad.mit.edu	37	1	149906417	149906417	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:149906417C>A	uc001etl.3	-	6	722	c.471G>T	c.(469-471)GTG>GTT	p.V157V	MTMR11_uc001etm.1_Silent_p.V85V|MTMR11_uc010pbm.1_Silent_p.V129V|MTMR11_uc010pbn.1_5'UTR	NM_001145862	NP_001139334	A4FU01	MTMRB_HUMAN	myotubularin related protein 11 isoform a	157							phosphatase activity			central_nervous_system(1)	1	Breast(34;0.0009)|Ovarian(49;0.0377)|all_hematologic(923;0.0597)|Hepatocellular(266;0.161)|Colorectal(459;0.171)		LUSC - Lung squamous cell carcinoma(543;0.221)|STAD - Stomach adenocarcinoma(528;0.247)			TGGCCATGGTCACCTGCAGAG	0.493			NA											15	49					1.49906e-05	1.62026e-05	0.00245	1	0
GON4L	54856	broad.mit.edu	37	1	155735478	155735478	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:155735478G>A	uc001flz.2	-	21	3883	c.3786C>T	c.(3784-3786)TTC>TTT	p.F1262F	GON4L_uc009wrg.1_RNA|GON4L_uc001fly.1_Silent_p.F1262F|GON4L_uc009wrh.1_Silent_p.F1262F|GON4L_uc001fma.1_Silent_p.F1262F|GON4L_uc001fmb.3_Silent_p.F458F|GON4L_uc001fmc.2_Silent_p.F1262F|GON4L_uc001fmd.3_Silent_p.F1262F|GON4L_uc009wri.2_Silent_p.F848F	NM_001037533	NP_001032622	Q3T8J9	GON4L_HUMAN	gon-4-like isoform a	1262					regulation of transcription, DNA-dependent	cytoplasm|nucleus	DNA binding			ovary(3)	3	Hepatocellular(266;0.0997)|all_hematologic(923;0.145)|all_neural(408;0.195)					CCACTTTCGGGAAAACAGTAG	0.512			NA											9	110					0	0	0.004482	0	0
PYHIN1	149628	broad.mit.edu	37	1	158909030	158909030	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:158909030C>T	uc001ftb.2	+	4	817	c.572C>T	c.(571-573)TCA>TTA	p.S191L	PYHIN1_uc001fta.3_Missense_Mutation_p.S191L|PYHIN1_uc001ftc.2_Missense_Mutation_p.S182L|PYHIN1_uc001ftd.2_Missense_Mutation_p.S191L|PYHIN1_uc001fte.2_Missense_Mutation_p.S182L	NM_152501	NP_689714	Q6K0P9	IFIX_HUMAN	pyrin and HIN domain family, member 1 alpha 1	191					cell cycle	nuclear speck				ovary(3)|pancreas(1)	4	all_hematologic(112;0.0378)					AACACTTCCTCAACTGAGGTA	0.498			NA											18	97					0	0	0.012319	0	0
RXRG	6258	broad.mit.edu	37	1	165386317	165386317	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:165386317G>A	uc001gda.2	-	4	883	c.583C>T	c.(583-585)CGC>TGC	p.R195C		NM_006917	NP_008848	P48443	RXRG_HUMAN	retinoid X receptor, gamma isoform a	195	NR C4-type.|Nuclear receptor.				regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor	nucleoplasm	retinoid-X receptor activity|sequence-specific DNA binding transcription factor activity|steroid binding|steroid hormone receptor activity|zinc ion binding				0	all_hematologic(923;0.0773)|Acute lymphoblastic leukemia(8;0.155)				Acitretin(DB00459)|Adapalene(DB00210)|Alitretinoin(DB00523)|Etretinate(DB00926)|Tretinoin(DB00755)	TTCTGATAGCGACAGTACTGG	0.512			NA											18	63					0	0	0.00499	0	0
F5	2153	broad.mit.edu	37	1	169511240	169511240	+	Nonsense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:169511240G>A	uc001ggg.1	-	13	3233	c.3088C>T	c.(3088-3090)CGA>TGA	p.R1030*		NM_000130	NP_000121	P12259	FA5_HUMAN	coagulation factor V precursor	1030	B.				cell adhesion|platelet activation|platelet degranulation	plasma membrane|platelet alpha granule lumen	copper ion binding|oxidoreductase activity			ovary(3)|large_intestine(1)|central_nervous_system(1)|skin(1)	6	all_hematologic(923;0.208)				Drotrecogin alfa(DB00055)	TTCTTTTTTCGTGTCTTAATG	0.408			NA											103	200					0	0	0.01441	0	0
C1orf129	80133	broad.mit.edu	37	1	170928657	170928657	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:170928657C>A	uc001ghg.2	+	5	337	c.207C>A	c.(205-207)TCC>TCA	p.S69S	C1orf129_uc009wvy.2_5'UTR|C1orf129_uc010plz.1_Silent_p.S69S	NM_025063	NP_079339	Q5TGP6	CA129_HUMAN	hypothetical protein LOC80133 isoform 2	69							binding			pancreas(1)	1	all_hematologic(923;0.0922)|Acute lymphoblastic leukemia(37;0.181)					TAGAGTCATCCTTTGGAATGC	0.353			NA											8	70					1.12685e-05	1.22316e-05	0.004482	1	0
FMO1	2326	broad.mit.edu	37	1	171251200	171251200	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:171251200A>G	uc009wvz.2	+	7	1047	c.911A>G	c.(910-912)AAA>AGA	p.K304R	FMO1_uc010pme.1_Missense_Mutation_p.K241R|FMO1_uc001ghl.2_Missense_Mutation_p.K304R|FMO1_uc001ghm.2_Missense_Mutation_p.K304R|FMO1_uc001ghn.2_Missense_Mutation_p.K304R	NM_002021	NP_002012	Q01740	FMO1_HUMAN	flavin containing monooxygenase 1	304					NADPH oxidation|organic acid metabolic process|toxin metabolic process|xenobiotic metabolic process	endoplasmic reticulum lumen|integral to membrane|intrinsic to endoplasmic reticulum membrane|microsome	flavin adenine dinucleotide binding|flavin-containing monooxygenase activity|NADP binding			skin(1)	1	all_hematologic(923;0.0922)|Acute lymphoblastic leukemia(37;0.181)					CCAAGCATAAAAGAGGTAAAG	0.403			NA											20	77					0	0	0.007413	0	0
MYOC	4653	broad.mit.edu	37	1	171605171	171605171	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:171605171C>T	uc001ghu.2	-	3	1431	c.1409G>A	c.(1408-1410)CGC>CAC	p.R470H	MYOC_uc010pmk.1_Missense_Mutation_p.R412H	NM_000261	NP_000252	Q99972	MYOC_HUMAN	myocilin precursor	470	Olfactomedin-like.		R -> C (in GLC1A).|R -> H.		anatomical structure morphogenesis	cilium|extracellular space|rough endoplasmic reticulum	structural molecule activity			lung(1)	1	all_cancers(6;5.47e-10)|all_hematologic(923;0.088)|Acute lymphoblastic leukemia(37;0.181)					GTACTTATAGCGGTTCTTGAA	0.488			NA											6	114					0	0	0.001168	0	0
PAPPA2	60676	broad.mit.edu	37	1	176709310	176709310	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:176709310G>T	uc001gkz.2	+	14	5293	c.4129G>T	c.(4129-4131)GGG>TGG	p.G1377W	PAPPA2_uc009www.2_RNA	NM_020318	NP_064714	Q9BXP8	PAPP2_HUMAN	pappalysin 2 isoform 1	1377					cell differentiation|proteolysis|regulation of cell growth	extracellular region|intracellular|membrane	metalloendopeptidase activity|zinc ion binding			ovary(7)|central_nervous_system(5)|skin(2)|lung(1)|breast(1)	16						AGAGGACGAGGGGCAGAATCA	0.478			NA											18	34					6.94344e-10	8.47901e-10	0.006122	1	0
KLHL12	59349	broad.mit.edu	37	1	202863732	202863732	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:202863732C>T	uc001gyo.1	-	9	1481	c.1281G>A	c.(1279-1281)GTG>GTA	p.V427V	KLHL12_uc001gym.1_Silent_p.V160V|KLHL12_uc001gyn.1_Silent_p.V277V|KLHL12_uc010pqc.1_Silent_p.V465V|KLHL12_uc009xah.1_Silent_p.V326V	NM_021633	NP_067646	Q53G59	KLH12_HUMAN	kelch-like 12	427	Kelch 4.|Interaction with DVL3.				Wnt receptor signaling pathway		protein binding				0			BRCA - Breast invasive adenocarcinoma(75;0.166)			GACAGTAGATCACTCCACTGG	0.512			NA											53	157					0	0	0.01441	0	0
OR2G2	81470	broad.mit.edu	37	1	247752427	247752427	+	Nonsense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:247752427G>T	uc010pyy.1	+	1	766	c.766G>T	c.(766-768)GGA>TGA	p.G256*		NM_001001915	NP_001001915	Q8NGZ5	OR2G2_HUMAN	olfactory receptor, family 2, subfamily G,	256	Helical; Name=6; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0	all_cancers(71;3.24e-05)|all_epithelial(71;1.3e-05)|Breast(184;0.0149)|Ovarian(71;0.0377)|all_lung(81;0.0662)|Lung NSC(105;0.0724)		OV - Ovarian serous cystadenocarcinoma(106;0.017)			catcttttatggaaccatcat	0.393			NA											57	82					3.53049e-34	5.03789e-34	0.01441	1	0
OR6F1	343169	broad.mit.edu	37	1	247875472	247875472	+	Nonsense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:247875472C>A	uc001idj.1	-	1	586	c.586G>T	c.(586-588)GAG>TAG	p.E196*		NM_001005286	NP_001005286	Q8NGZ6	OR6F1_HUMAN	olfactory receptor, family 6, subfamily F,	196	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0	all_cancers(71;3.24e-05)|all_epithelial(71;1.3e-05)|Breast(184;0.0149)|Ovarian(71;0.0377)|all_lung(81;0.0662)|Lung NSC(105;0.0724)		OV - Ovarian serous cystadenocarcinoma(106;0.0168)			GCCACAAGCTCTACTGCCTGT	0.532			NA											59	95					3.89483e-19	5.34749e-19	0.01441	1	0
OR1C1	26188	broad.mit.edu	37	1	247921189	247921189	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:247921189T>C	uc010pza.1	-	1	520	c.520A>G	c.(520-522)ATC>GTC	p.I174V		NM_012353	NP_036485	Q15619	OR1C1_HUMAN	olfactory receptor, family 1, subfamily C,	174	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			skin(1)	1	all_cancers(71;4.34e-05)|all_epithelial(71;1.13e-05)|Breast(184;0.0149)|Ovarian(71;0.0377)|all_lung(81;0.0786)|Lung NSC(105;0.0858)	all_cancers(173;0.0247)	OV - Ovarian serous cystadenocarcinoma(106;0.0168)			AAATGATGGATGATATTGGAG	0.478			NA											15	18					0	0	0.004007	0	0
OR2W3	343171	broad.mit.edu	37	1	248059229	248059229	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:248059229T>A	uc001idp.1	+	3	610	c.341T>A	c.(340-342)CTT>CAT	p.L114H	OR2W3_uc010pzb.1_Missense_Mutation_p.L114H	NM_001001957	NP_001001957	Q7Z3T1	OR2W3_HUMAN	olfactory receptor, family 2, subfamily W,	114	Helical; Name=3; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|breast(1)|pancreas(1)	3	all_cancers(71;0.000139)|all_epithelial(71;1.58e-05)|Breast(184;0.0117)|Ovarian(71;0.0377)|all_lung(81;0.127)|Lung NSC(105;0.136)		OV - Ovarian serous cystadenocarcinoma(106;0.0319)			GAGTGCCTGCTTCTGGCTGTC	0.567			NA											29	69					0	0	0.008361	0	0
OR2L2	26246	broad.mit.edu	37	1	248201902	248201902	+	Silent	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr1:248201902G>T	uc001idw.2	+	1	429	c.333G>T	c.(331-333)GGG>GGT	p.G111G	OR2L13_uc001ids.2_Intron	NM_001004686	NP_001004686	Q8NH16	OR2L2_HUMAN	olfactory receptor, family 2, subfamily L,	111	Helical; Name=3; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|central_nervous_system(1)|skin(1)	3	all_cancers(71;0.000149)|all_epithelial(71;1.27e-05)|Breast(184;0.00909)|Ovarian(71;0.0377)|all_lung(81;0.127)|Lung NSC(105;0.136)		OV - Ovarian serous cystadenocarcinoma(106;0.0278)			TTGCAGAAGGGCTGCTCCTGA	0.308			NA											50	180					2.52991e-16	3.38209e-16	0.01441	1	0
KIAA1462	57608	broad.mit.edu	37	10	30318595	30318595	+	Missense_Mutation	SNP	T	T	G	rs146919048	by1000genomes	TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr10:30318595T>G	uc001iux.2	-	2	541	c.482A>C	c.(481-483)GAG>GCG	p.E161A	KIAA1462_uc001iuy.2_Intron|KIAA1462_uc001iuz.2_Missense_Mutation_p.E23A|KIAA1462_uc009xle.1_Missense_Mutation_p.E161A	NM_020848	NP_065899	Q9P266	K1462_HUMAN	hypothetical protein LOC57608	161										ovary(4)	4						CATCACATGCTCTGACCTTCC	0.567			NA											11	310					0	0	0.008291	0	0
FRMPD2	143162	broad.mit.edu	37	10	49448430	49448431	+	Missense_Mutation	DNP	CC	CC	TA			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	CC	CC	-	-	CC	CC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr10:49448430_49448431CC>TA	uc001jgi.2	-	6	779_780	c.672_673GG>TA	c.(670-675)CAGGCC>CATACC	p.224_225QA>HT	FRMPD2_uc001jgh.2_Missense_Mutation_p.193_194QA>HT|FRMPD2_uc001jgj.2_Missense_Mutation_p.202_203QA>HT	NM_001018071	NP_001018081	Q68DX3	FRPD2_HUMAN	FERM and PDZ domain containing 2 isoform 3	224_225					tight junction assembly	basolateral plasma membrane|cytoplasm|cytoskeleton|tight junction	1-phosphatidylinositol binding|protein binding			large_intestine(1)	1				Kidney(211;0.201)		CACTCCGGGGCCTGTGCCGCTG	0.579			NA											7	49					0	0	0.004672	0	0
ABCC2	1244	broad.mit.edu	37	10	101564028	101564028	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr10:101564028C>G	uc001kqf.2	+	10	1601	c.1462C>G	c.(1462-1464)CAG>GAG	p.Q488E		NM_000392	NP_000383	Q92887	MRP2_HUMAN	ATP-binding cassette, sub-family C (CFTR/MRP),	488	Cytoplasmic (By similarity).|ABC transmembrane type-1 1.					apical plasma membrane|integral to plasma membrane	ATP binding|ATPase activity, coupled to transmembrane movement of substances|organic anion transmembrane transporter activity			ovary(1)	1		Colorectal(252;0.234)		Epithelial(162;2.77e-10)|all cancers(201;2.47e-08)	Adenosine triphosphate(DB00171)|Norgestimate(DB00957)|Pravastatin(DB00175)|Saquinavir(DB01232)|Sulfinpyrazone(DB01138)	TAAGACCATTCAGGTAAAGAA	0.418			NA											26	59					0	0	0.003954	0	0
C10orf2	56652	broad.mit.edu	37	10	102753043	102753043	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr10:102753043G>T	uc001ksf.2	+	5	2506	c.1831G>T	c.(1831-1833)GAT>TAT	p.D611Y	C10orf2_uc001ksg.2_3'UTR|C10orf2_uc001ksi.2_3'UTR|C10orf2_uc010qpv.1_Missense_Mutation_p.D157Y|C10orf2_uc001ksh.2_RNA	NM_021830	NP_068602	Q96RR1	PEO1_HUMAN	twinkle isoform A	611	SF4 helicase.				cell death|mitochondrial DNA replication|protein hexamerization|protein homooligomerization|transcription from mitochondrial promoter	mitochondrial nucleoid	5'-3' DNA helicase activity|ATP binding|protease binding|single-stranded DNA binding			ovary(1)	1		Colorectal(252;0.122)|all_hematologic(284;0.152)		Epithelial(162;7.18e-11)|all cancers(201;8.75e-09)|BRCA - Breast invasive adenocarcinoma(275;0.224)		GAACCGCTTTGATGGAGATGT	0.527			NA											48	140					6.4308e-24	9.07458e-24	0.01441	1	0
ADD3	120	broad.mit.edu	37	10	111878980	111878980	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr10:111878980G>T	uc001kyt.3	+	8	1043	c.729G>T	c.(727-729)ATG>ATT	p.M243I	ADD3_uc001kys.3_Missense_Mutation_p.M243I|ADD3_uc001kyu.2_Missense_Mutation_p.M243I|ADD3_uc001kyv.2_Missense_Mutation_p.M243I|ADD3_uc001kyw.2_Missense_Mutation_p.M243I	NM_016824	NP_058432	Q9UEY8	ADDG_HUMAN	adducin 3 (gamma) isoform a	243						cytoskeleton	actin binding|calmodulin binding|metal ion binding|structural constituent of cytoskeleton			ovary(2)|skin(2)|large_intestine(1)	5		Breast(234;0.052)|Lung NSC(174;0.223)		Epithelial(162;4.15e-05)|all cancers(201;0.000587)|BRCA - Breast invasive adenocarcinoma(275;0.0742)		TATCCTCCATGAAATGTGGGA	0.408			NA											18	53					1.45105e-14	1.90967e-14	0.006122	1	0
BAG3	9531	broad.mit.edu	37	10	121431866	121431866	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr10:121431866C>T	uc001lem.2	+	3	913	c.607C>T	c.(607-609)CGG>TGG	p.R203W	BAG3_uc001lel.2_Missense_Mutation_p.R203W	NM_004281	NP_004272	O95817	BAG3_HUMAN	BCL2-associated athanogene 3	203					anti-apoptosis|apoptosis|protein folding	cytosol				ovary(2)	2		Lung NSC(174;0.109)|all_lung(145;0.142)		all cancers(201;0.00187)|BRCA - Breast invasive adenocarcinoma(275;0.148)		CCAGCTCCCGCGGGGGTACAT	0.652			NA											14	67					0	0	0.001855	0	0
TRPM5	29850	broad.mit.edu	37	11	2432639	2432639	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:2432639C>T	uc001lwm.3	-	18	2734	c.2725G>A	c.(2725-2727)GTG>ATG	p.V909M	TRPM5_uc010qxl.1_Missense_Mutation_p.V909M|TRPM5_uc009ydn.2_Missense_Mutation_p.V911M	NM_014555	NP_055370	Q9NZQ8	TRPM5_HUMAN	transient receptor potential cation channel,	909	Extracellular (Potential).					integral to membrane|plasma membrane	receptor activity|voltage-gated ion channel activity			ovary(1)|breast(1)|central_nervous_system(1)|skin(1)	4		Medulloblastoma(188;0.0049)|Breast(177;0.00586)|all_epithelial(84;0.0075)|Ovarian(85;0.0256)|all_neural(188;0.0311)		BRCA - Breast invasive adenocarcinoma(625;0.00147)|LUSC - Lung squamous cell carcinoma(625;0.191)		CGGTAGAGCACCCGGCGGAAG	0.632	NSCLC(1;49 61 17205 18850 43201)		NA											15	30					0	0	0.00245	0	0
NAV2	89797	broad.mit.edu	37	11	20113762	20113762	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:20113762A>G	uc001mpr.3	+	28	6033	c.5672A>G	c.(5671-5673)GAG>GGG	p.E1891G	NAV2_uc001mpp.2_Missense_Mutation_p.E1824G|NAV2_uc009yhx.2_Missense_Mutation_p.E952G|NAV2_uc009yhz.2_Missense_Mutation_p.E533G|NAV2_uc001mpu.2_Missense_Mutation_p.E326G	NM_182964	NP_892009	Q8IVL1	NAV2_HUMAN	neuron navigator 2 isoform 1	1947	Potential.					nucleus	ATP binding|helicase activity			skin(4)|ovary(1)|pancreas(1)	6						AGTGAAATAGAGAAGCTGAAA	0.498			NA											33	69					0	0	0.003271	0	0
OR5D13	390142	broad.mit.edu	37	11	55541676	55541676	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:55541676G>C	uc010ril.1	+	1	763	c.763G>C	c.(763-765)GGA>CGA	p.G255R		NM_001001967	NP_001001967	Q8NGL4	OR5DD_HUMAN	olfactory receptor, family 5, subfamily D,	255	Helical; Name=6; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|pancreas(1)|skin(1)	3		all_epithelial(135;0.196)				TATCTTCCATGGAACTATCCT	0.443			NA											23	52					0	0	0.014323	0	0
OR5I1	10798	broad.mit.edu	37	11	55703583	55703583	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:55703583C>A	uc010ris.1	-	1	294	c.294G>T	c.(292-294)GGG>GGT	p.G98G		NM_006637	NP_006628	Q13606	OR5I1_HUMAN	olfactory receptor, family 5, subfamily I,	98	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)	1						GCAGGGCACACCCATAATAGG	0.418			NA											7	35					5.18039e-06	5.72095e-06	0.00308	1	0
OR8J3	81168	broad.mit.edu	37	11	55905192	55905192	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:55905192C>T	uc010riz.1	-	1	3	c.3G>A	c.(1-3)ATG>ATA	p.M1I		NM_001004064	NP_001004064	Q8NGG0	OR8J3_HUMAN	olfactory receptor, family 8, subfamily J,	1	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			skin(2)	2	Esophageal squamous(21;0.00693)					TTTCAGGAGCCATGTCAGAGT	0.428			NA											27	53					0	0	0.004656	0	0
OR8K5	219453	broad.mit.edu	37	11	55927495	55927495	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:55927495T>A	uc010rja.1	-	1	299	c.299A>T	c.(298-300)CAG>CTG	p.Q100L		NM_001004058	NP_001004058	Q8NH50	OR8K5_HUMAN	olfactory receptor, family 8, subfamily K,	100	Helical; Name=3; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(2)|pancreas(1)|skin(1)	4	Esophageal squamous(21;0.00693)	Lung NSC(402;0.197)|all_epithelial(135;0.236)				GAATGCCAGCTGTGCAGCACA	0.408			NA											24	104					0	0	0.00333	0	0
FAM111A	63901	broad.mit.edu	37	11	58920495	58920495	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:58920495G>T	uc010rkp.1	+	5	1581	c.1354G>T	c.(1354-1356)GTA>TTA	p.V452L	FAM111A_uc010rkq.1_Missense_Mutation_p.V452L|FAM111A_uc010rkr.1_Missense_Mutation_p.V452L|FAM111A_uc001nno.2_Missense_Mutation_p.V452L|FAM111A_uc001nnp.2_Missense_Mutation_p.V452L|FAM111A_uc001nnq.2_Missense_Mutation_p.V452L	NM_001142521	NP_001135993	Q96PZ2	F111A_HUMAN	hypothetical protein LOC63901	452					proteolysis		serine-type endopeptidase activity			ovary(3)	3		all_epithelial(135;0.139)				TGGACAACAAGTACCTATGGA	0.368			NA											18	65					3.52763e-06	3.91274e-06	0.00499	1	0
PPP2R5B	5526	broad.mit.edu	37	11	64694295	64694295	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:64694295G>C	uc001oby.2	+	3	896	c.311G>C	c.(310-312)CGG>CCG	p.R104P	PPP2R5B_uc001obz.2_Missense_Mutation_p.R104P	NM_006244	NP_006235	Q15173	2A5B_HUMAN	beta isoform of regulatory subunit B56, protein	104					signal transduction	cytoplasm|protein phosphatase type 2A complex	protein binding|protein phosphatase type 2A regulator activity			ovary(2)	2						GAGGTGAAGCGGGCAGCCCTC	0.632			NA											19	74					0	0	0.007413	0	0
PITPNM1	9600	broad.mit.edu	37	11	67263770	67263770	+	Silent	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:67263770C>G	uc001olx.2	-	14	2385	c.2196G>C	c.(2194-2196)GCG>GCC	p.A732A	PITPNM1_uc001olw.2_Silent_p.A14A|PITPNM1_uc001oly.2_Silent_p.A732A|PITPNM1_uc001olz.2_Silent_p.A731A	NM_004910	NP_004901	O00562	PITM1_HUMAN	phosphatidylinositol transfer protein,	732	DDHD.				brain development|lipid metabolic process|phototransduction|protein transport	cleavage furrow|endoplasmic reticulum membrane|Golgi cisterna membrane|lipid particle|membrane fraction|midbody	metal ion binding|phosphatidylinositol transporter activity			lung(2)|central_nervous_system(1)	3						AGGGGTCAGCCGCGTGGAAGA	0.642	GBM(28;144 709 4607 5525)		NA											17	51					0	0	0.00499	0	0
GPR83	10888	broad.mit.edu	37	11	94129565	94129565	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:94129565C>A	uc001pet.2	-	2	685	c.513G>T	c.(511-513)CAG>CAT	p.Q171H		NM_016540	NP_057624	Q9NYM4	GPR83_HUMAN	G protein-coupled receptor 83 precursor	171	Cytoplasmic (Potential).					integral to membrane|plasma membrane	neuropeptide Y receptor activity			central_nervous_system(2)|ovary(1)	3		Acute lymphoblastic leukemia(157;2.26e-05)|all_hematologic(158;0.0123)				GTGCCCTCACCTGGTGGCGAT	0.547			NA											23	59					1.96895e-08	2.35902e-08	0.00278	1	0
CLDN25	644672	broad.mit.edu	37	11	113650992	113650992	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:113650992C>A	uc009yyw.1	+	1	475	c.475C>A	c.(475-477)CGG>AGG	p.R159R		NM_001101389	NP_001094859	C9JDP6	CLD25_HUMAN	claudin 25	159	Extracellular (Potential).					integral to membrane|tight junction	structural molecule activity				0						CATCATACCTCGGTGGGAGTT	0.577			NA											9	37					3.09899e-07	3.54569e-07	0.004482	1	0
PCSK7	9159	broad.mit.edu	37	11	117100519	117100519	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:117100519G>A	uc001pqr.2	-	3	243	c.42C>T	c.(40-42)CCC>CCT	p.P14P	RNF214_uc001pqt.2_5'Flank|RNF214_uc001pqu.2_5'Flank|RNF214_uc010rxf.1_5'Flank	NM_004716	NP_004707	Q16549	PCSK7_HUMAN	proprotein convertase subtilisin/kexin type 7	14					peptide hormone processing	integral to Golgi membrane	serine-type endopeptidase activity				0	all_hematologic(175;0.0487)	Breast(348;0.00908)|Medulloblastoma(222;0.0425)|all_hematologic(192;0.196)|all_neural(223;0.234)		BRCA - Breast invasive adenocarcinoma(274;1.72e-06)|Epithelial(105;6.71e-05)|all cancers(92;0.000537)		GCAGGCCCAGGGGGGCATCCA	0.587			NA	T	IGH@	MLCLS								3	21					0	0	0.004672	0	0
OR10G7	390265	broad.mit.edu	37	11	123909361	123909361	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:123909361G>A	uc001pzq.1	-	1	348	c.348C>T	c.(346-348)GTC>GTT	p.V116V		NM_001004463	NP_001004463	Q8NGN6	O10G7_HUMAN	olfactory receptor, family 10, subfamily G,	116	Helical; Name=3; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(2)	2		Breast(109;0.00867)|Medulloblastoma(222;0.0523)|Lung NSC(97;0.118)|all_lung(97;0.126)|all_neural(223;0.22)		BRCA - Breast invasive adenocarcinoma(274;4.88e-06)|OV - Ovarian serous cystadenocarcinoma(99;0.0521)		CATAGGACATGACTGTGTAGA	0.572			NA											48	99					0	0	0.01441	0	0
PRDM10	56980	broad.mit.edu	37	11	129814722	129814722	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr11:129814722C>T	uc001qfm.2	-	6	938	c.706G>A	c.(706-708)GTG>ATG	p.V236M	PRDM10_uc001qfj.2_Missense_Mutation_p.V150M|PRDM10_uc001qfk.2_Missense_Mutation_p.V150M|PRDM10_uc001qfl.2_Missense_Mutation_p.V150M|PRDM10_uc010sbx.1_Missense_Mutation_p.V150M|PRDM10_uc001qfn.2_Missense_Mutation_p.V236M|PRDM10_uc009zct.1_Missense_Mutation_p.V268M	NM_020228	NP_064613	Q9NQV6	PRD10_HUMAN	PR domain containing 10 isoform 1	236	SET.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			pancreas(1)	1	all_hematologic(175;0.0537)	Breast(109;0.000496)|Lung NSC(97;0.000693)|all_lung(97;0.00151)|Medulloblastoma(222;0.0425)|all_neural(223;0.0837)		OV - Ovarian serous cystadenocarcinoma(99;0.0174)|Lung(977;0.176)|LUSC - Lung squamous cell carcinoma(976;0.185)		GGCCCCTCCACGGGGCCAAAC	0.592			NA											16	117					0	0	0.003163	0	0
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	C	A	rs121913530		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:25398285C>A	uc001rgp.1	-	2	215	c.34G>T	c.(34-36)GGT>TGT	p.G12C	KRAS_uc001rgq.1_Missense_Mutation_p.G12C|KRAS_uc001rgr.2_RNA	NM_033360	NP_203524	P01116	RASK_HUMAN	c-K-ras2 protein isoform a precursor	12	GTP.		G -> D (in pancreatic carcinoma, GASC and lung carcinoma; somatic mutation).|G -> R (in lung cancer and bladder cancer; somatic mutation).|G -> S (in lung carcinoma and GASC; somatic mutation).|G -> A (in a colorectal cancer sample; somatic mutation).|G -> C (in lung carcinoma; somatic mutation).|G -> V (in lung carcinoma, pancreatic carcinoma, colon cancer and GASC; somatic mutation).		activation of MAPKK activity|axon guidance|blood coagulation|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|nerve growth factor receptor signaling pathway|Ras protein signal transduction	plasma membrane	GTP binding|GTPase activity|protein binding	p.G12D(7175)|p.G12V(4780)|p.G12C(2482)|p.G12A(1180)|p.G12S(1119)|p.G12R(691)|p.G12?(50)|p.G12F(34)|p.G12G(6)|p.G12N(6)|p.G12L(5)|p.G12I(4)|p.G12_G13insG(4)|p.G12E(3)|p.G12W(3)|p.A11_G12insGA(2)|p.G12Y(2)|p.G12fs*3(1)		large_intestine(12391)|pancreas(3285)|lung(2847)|biliary_tract(521)|ovary(443)|endometrium(339)|haematopoietic_and_lymphoid_tissue(318)|stomach(203)|thyroid(149)|prostate(85)|soft_tissue(77)|small_intestine(62)|upper_aerodigestive_tract(59)|cervix(49)|urinary_tract(48)|skin(38)|liver(31)|breast(28)|testis(17)|oesophagus(15)|central_nervous_system(9)|peritoneum(6)|salivary_gland(6)|kidney(5)|gastrointestinal_tract_(site_indeterminate)(5)|thymus(5)|eye(4)|autonomic_ganglia(2)|bone(2)|genital_tract(1)|penis(1)|adrenal_gland(1)	21052	all_cancers(2;1e-35)|all_epithelial(2;1.97e-38)|all_lung(3;2.1e-23)|Lung NSC(3;1.16e-22)|Acute lymphoblastic leukemia(6;0.00231)|all_hematologic(7;0.00259)|Melanoma(3;0.0301)|Colorectal(261;0.11)|Ovarian(17;0.12)		OV - Ovarian serous cystadenocarcinoma(3;1.23e-21)|Epithelial(3;1.31e-20)|all cancers(3;5.45e-18)|STAD - Stomach adenocarcinoma(2;2.68e-05)			CCTACGCCACCAGCTCCAACT	0.348	Pancreas(8;6 143 191 305 2070 2426 4376 10944 11745 26467 38091 50869)	G12C(UMUC3_URINARY_TRACT)|G12R(CAL62_THYROID)|G12C(CALU1_LUNG)|G12C(NCIH2030_LUNG)|G12C(LU99_LUNG)|G12C(NCIH1792_LUNG)|G12R(KP2_PANCREAS)|G12C(KHM1B_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12C(NCIH2122_LUNG)|G12C(NCIH358_LUNG)|G12R(PSN1_PANCREAS)|G12C(KYSE410_OESOPHAGUS)|G12S(A549_LUNG)|G12R(HUPT3_PANCREAS)|G12R(TCCPAN2_PANCREAS)|G12C(HCC44_LUNG)|G12S(KMS20_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12C(SW1463_LARGE_INTESTINE)|G12C(NCIH23_LUNG)|G12C(LU65_LUNG)|G12C(NCIH1373_LUNG)|G12C(MIAPACA2_PANCREAS)|G12R(HS274T_BREAST)|G12S(LS123_LARGE_INTESTINE)|G12C(SW1573_LUNG)|G12C(SW837_LARGE_INTESTINE)|G12C(OV56_OVARY)|G12C(IALM_LUNG)	119	Mis		pancreatic|colorectal|lung|thyroid|AML|others				Cardiofaciocutaneous_syndrome|Noonan_syndrome	TSP Lung(1;<1E-08)|Multiple Myeloma(2;<1E-6)			10	12					2.17888e-05	2.34506e-05	0.006214	1	0
KRT74	121391	broad.mit.edu	37	12	52962144	52962144	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:52962144G>A	uc001sap.1	-	7	1212	c.1164C>T	c.(1162-1164)GAC>GAT	p.D388D		NM_175053	NP_778223	Q7RTS7	K2C74_HUMAN	keratin 6 irs4	388	Rod.|Coil 2.					keratin filament	structural molecule activity			ovary(1)|skin(1)	2				BRCA - Breast invasive adenocarcinoma(357;0.191)		GCTGCTCAGCGTCAGCGATGG	0.577			NA											5	34					0	0	0.000602	0	0
SDR9C7	121214	broad.mit.edu	37	12	57328041	57328041	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:57328041G>A	uc010sqw.1	-	1	5	c.5C>T	c.(4-6)GCG>GTG	p.A2V		NM_148897	NP_683695	Q8NEX9	DR9C7_HUMAN	short chain dehydrogenase/reductase family 9C,	2						cytoplasm	binding|oxidoreductase activity			central_nervous_system(1)	1						TGTGAGGGCCGCCATAGGGCA	0.542			NA											3	51					0	0	0.004672	0	0
LRP1	4035	broad.mit.edu	37	12	57573898	57573898	+	Missense_Mutation	SNP	T	T	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:57573898T>G	uc001snd.2	+	31	5676	c.5210T>G	c.(5209-5211)CTC>CGC	p.L1737R		NM_002332	NP_002323	Q07954	LRP1_HUMAN	low density lipoprotein-related protein 1	1737	LDL-receptor class B 15.|Extracellular (Potential).				aorta morphogenesis|apoptotic cell clearance|negative regulation of platelet-derived growth factor receptor-beta signaling pathway|negative regulation of smooth muscle cell migration|negative regulation of Wnt receptor signaling pathway|positive regulation of cholesterol efflux|regulation of actin cytoskeleton organization|regulation of phospholipase A2 activity	coated pit|integral to plasma membrane|nucleus	apolipoprotein E binding|calcium ion binding|lipoprotein transporter activity|protein complex binding|receptor activity			ovary(8)|lung(3)|breast(3)|large_intestine(2)|central_nervous_system(2)|skin(2)|pancreas(2)	22				BRCA - Breast invasive adenocarcinoma(357;0.0103)	Alteplase(DB00009)|Anistreplase(DB00029)|Antihemophilic Factor(DB00025)|Becaplermin(DB00102)|Coagulation Factor IX(DB00100)|Tenecteplase(DB00031)	CGCACCCTGCTCTTCAGTGGC	0.612			NA											54	145					0	0	0.01441	0	0
LGR5	8549	broad.mit.edu	37	12	71946940	71946940	+	Missense_Mutation	SNP	T	T	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:71946940T>G	uc001swl.2	+	5	564	c.516T>G	c.(514-516)AAT>AAG	p.N172K	LGR5_uc001swm.2_Missense_Mutation_p.N172K|LGR5_uc001swn.1_RNA	NM_003667	NP_003658	O75473	LGR5_HUMAN	leucine-rich repeat-containing G protein-coupled	172	Extracellular (Potential).|LRR 5.					integral to plasma membrane	protein-hormone receptor activity			lung(4)|skin(3)|ovary(1)|pancreas(1)	9						TGGATGACAATGCGTTAACAG	0.507			NA											14	89					0	0	0.00245	0	0
PPP1R12A	4659	broad.mit.edu	37	12	80266692	80266692	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:80266692C>A	uc001syz.2	-	2	531	c.264G>T	c.(262-264)ATG>ATT	p.M88I	PPP1R12A_uc010suc.1_Missense_Mutation_p.M1I|PPP1R12A_uc001sza.2_Missense_Mutation_p.M88I|PPP1R12A_uc010sud.1_Missense_Mutation_p.M88I|PPP1R12A_uc001szb.2_Missense_Mutation_p.M88I|PPP1R12A_uc001szc.2_Missense_Mutation_p.M88I	NM_002480	NP_002471	O14974	MYPT1_HUMAN	protein phosphatase 1, regulatory (inhibitor)	88	ANK 2.					contractile fiber	protein binding|signal transducer activity			ovary(2)|breast(2)|large_intestine(1)|central_nervous_system(1)|skin(1)	7						GAAACTTCACCATATCAACAT	0.333			NA											12	21					3.07112e-06	3.4364e-06	0.010729	1	0
APAF1	317	broad.mit.edu	37	12	99042414	99042414	+	Missense_Mutation	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:99042414A>T	uc001tfz.2	+	3	726	c.149A>T	c.(148-150)CAG>CTG	p.Q50L	APAF1_uc001tfy.2_Missense_Mutation_p.Q50L|APAF1_uc001tga.2_Missense_Mutation_p.Q50L|APAF1_uc001tgb.2_Missense_Mutation_p.Q50L|APAF1_uc001tgc.2_Missense_Mutation_p.Q50L	NM_181861	NP_863651	O14727	APAF_HUMAN	apoptotic peptidase activating factor 1 isoform	50	CARD.				activation of caspase activity by cytochrome c|defense response|induction of apoptosis by intracellular signals|nervous system development	cytosol|Golgi apparatus|nucleus	ATP binding|caspase activator activity|protein binding			ovary(2)|lung(1)	3					Adenosine triphosphate(DB00171)	CCCACTCAACAGCAAAGAGCA	0.303			NA											22	53					0	0	0.012319	0	0
UTP20	27340	broad.mit.edu	37	12	101732712	101732712	+	Silent	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:101732712T>C	uc001tia.1	+	31	4146	c.3990T>C	c.(3988-3990)AGT>AGC	p.S1330S		NM_014503	NP_055318	O75691	UTP20_HUMAN	down-regulated in metastasis	1330					endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)|endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)|endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)|negative regulation of cell proliferation	90S preribosome|cytoplasm|nucleolus|nucleoplasm|preribosome, small subunit precursor|small-subunit processome	protein binding			ovary(2)|breast(2)	4						CACAAGTCAGTAAAGAGCTTG	0.303			NA											16	39					0	0	0.003163	0	0
SLC41A2	84102	broad.mit.edu	37	12	105198953	105198953	+	Nonsense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:105198953G>A	uc001tla.2	-	10	1866	c.1699C>T	c.(1699-1701)CGA>TGA	p.R567*		NM_032148	NP_115524	Q96JW4	S41A2_HUMAN	solute carrier family 41, member 2	567	Cytoplasmic.					integral to membrane|plasma membrane	magnesium ion transmembrane transporter activity			ovary(1)|skin(1)	2						TCTCCATCTCGATCTCCAATA	0.418	Esophageal Squamous(195;176 2919 4272 35572)		NA											24	294					0	0	0.003954	0	0
TBX3	6926	broad.mit.edu	37	12	115114207	115114207	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:115114207T>C	uc001tvt.1	-	6	1974	c.1010A>G	c.(1009-1011)GAT>GGT	p.D337G	TBX3_uc001tvu.1_Missense_Mutation_p.D317G	NM_016569	NP_057653	O15119	TBX3_HUMAN	T-box 3 protein isoform 2	337					anterior/posterior axis specification, embryo|anti-apoptosis|cell aging|embryonic arm morphogenesis|embryonic digit morphogenesis|female genitalia development|follicle-stimulating hormone secretion|luteinizing hormone secretion|male genitalia development|mesoderm morphogenesis|negative regulation of myoblast differentiation|negative regulation of transcription, DNA-dependent|positive regulation of cell cycle|positive regulation of cell proliferation|regulation of transcription from RNA polymerase II promoter|skeletal system development	nucleus	sequence-specific DNA binding			ovary(2)|skin(1)	3	Medulloblastoma(191;0.163)|all_neural(191;0.178)			BRCA - Breast invasive adenocarcinoma(302;0.0574)		GGAGGACTCATCAGAGGTCCC	0.512			NA											35	67					0	0	0.004878	0	0
CIT	11113	broad.mit.edu	37	12	120156087	120156087	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:120156087C>T	uc001txi.1	-	31	4058	c.4005G>A	c.(4003-4005)CCG>CCA	p.P1335P	CIT_uc001txh.1_Silent_p.P854P|CIT_uc001txj.1_Silent_p.P1377P	NM_007174	NP_009105	O14578	CTRO_HUMAN	citron	1335					intracellular signal transduction		ATP binding|metal ion binding|protein serine/threonine kinase activity|SH3 domain binding|small GTPase regulator activity			ovary(6)|urinary_tract(1)|lung(1)|breast(1)|skin(1)	10	all_neural(191;0.0804)|Medulloblastoma(191;0.0922)	Myeloproliferative disorder(1001;0.0255)		BRCA - Breast invasive adenocarcinoma(302;0.211)		GGCTGGATGGCGGGGCCAGCA	0.572			NA											3	45					0	0	0.004672	0	0
CLIP1	6249	broad.mit.edu	37	12	122826024	122826024	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:122826024T>C	uc001ucg.1	-	10	1833	c.1727A>G	c.(1726-1728)CAT>CGT	p.H576R	CLIP1_uc001uch.1_Missense_Mutation_p.H565R|CLIP1_uc001uci.1_Missense_Mutation_p.H530R|CLIP1_uc001ucj.1_Missense_Mutation_p.H266R|CLIP1_uc009zxo.1_Missense_Mutation_p.H132R	NM_002956	NP_002947	P30622	CLIP1_HUMAN	restin isoform a	576	Potential.				mitotic prometaphase|positive regulation of microtubule polymerization	centrosome|cytosol|endosome|intermediate filament|kinetochore	nucleic acid binding|protein homodimerization activity|zinc ion binding			ovary(2)|breast(1)	3	all_neural(191;0.0837)|Medulloblastoma(191;0.163)			OV - Ovarian serous cystadenocarcinoma(86;1.81e-05)|Epithelial(86;6.85e-05)|BRCA - Breast invasive adenocarcinoma(302;0.226)		GGCTCCAAAATGCTCCTTCAG	0.443			NA											51	270					0	0	0.01441	0	0
GPR133	283383	broad.mit.edu	37	12	131498749	131498749	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr12:131498749C>T	uc001uit.3	+	13	1896	c.1337C>T	c.(1336-1338)GCG>GTG	p.A446V	GPR133_uc010tbm.1_Missense_Mutation_p.A478V	NM_198827	NP_942122	Q6QNK2	GP133_HUMAN	G protein-coupled receptor 133 precursor	446	Extracellular (Potential).				neuropeptide signaling pathway	integral to membrane|plasma membrane	G-protein coupled receptor activity			pancreas(5)|ovary(3)|skin(2)	10	all_neural(191;0.0982)|Medulloblastoma(191;0.163)			OV - Ovarian serous cystadenocarcinoma(86;1.68e-06)|all cancers(50;2.71e-06)|Epithelial(86;6.75e-06)		CCAAGGATCGCGGAGGCCATG	0.587			NA											9	51					0	0	0.008291	0	0
FAM123A	219287	broad.mit.edu	37	13	25743844	25743844	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:25743844T>A	uc001uqb.2	-	1	2014	c.1914A>T	c.(1912-1914)AAA>AAT	p.K638N	FAM123A_uc001uqa.2_Missense_Mutation_p.K519N|FAM123A_uc001uqc.2_Missense_Mutation_p.K519N	NM_152704	NP_689917	Q8N7J2	F123A_HUMAN	hypothetical protein LOC219287 isoform 1	638										ovary(2)|large_intestine(1)|lung(1)	4		Lung SC(185;0.0225)|Breast(139;0.0602)		all cancers(112;0.0071)|Epithelial(112;0.0398)|OV - Ovarian serous cystadenocarcinoma(117;0.151)|GBM - Glioblastoma multiforme(144;0.222)|Lung(94;0.241)		AAACCGGGATTTTTGTTCTGG	0.552			NA											28	97					0	0	0.005443	0	0
ATP8A2	51761	broad.mit.edu	37	13	26116088	26116088	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:26116088G>T	uc001uqk.2	+	9	825	c.683G>T	c.(682-684)CGT>CTT	p.R228L	ATP8A2_uc010tdi.1_Missense_Mutation_p.R188L|ATP8A2_uc010tdj.1_RNA|ATP8A2_uc001uql.1_Missense_Mutation_p.R188L	NM_016529	NP_057613	Q9NTI2	AT8A2_HUMAN	ATPase, aminophospholipid transporter-like,	188	Cytoplasmic (Potential).				ATP biosynthetic process|negative regulation of cell proliferation	integral to membrane	ATP binding|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism|magnesium ion binding|phospholipid-translocating ATPase activity			ovary(2)|large_intestine(1)|skin(1)	4		Breast(139;0.0201)|Lung SC(185;0.0225)		all cancers(112;0.043)|OV - Ovarian serous cystadenocarcinoma(117;0.0748)|Epithelial(112;0.079)		ATGCAAACACGTGAAGTTCTG	0.433			NA											20	68					0.00887093	0.00912233	0.008871	1	0
MTUS2	23281	broad.mit.edu	37	13	29598883	29598883	+	Silent	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:29598883G>T	uc001usl.3	+	1	136	c.78G>T	c.(76-78)CGG>CGT	p.R26R		NM_001033602	NP_001028774	Q5JR59	MTUS2_HUMAN	hypothetical protein LOC23281 isoform a	16						cytoplasm|microtubule	microtubule binding|protein homodimerization activity				0						CTCAGTTGCGGGACAACAGAA	0.458			NA											24	58					9.95505e-16	1.32387e-15	0.014323	1	0
C13orf26	122046	broad.mit.edu	37	13	31513846	31513847	+	Missense_Mutation	DNP	GG	GG	TT			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	GG	GG	-	-	GG	GG	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:31513846_31513847GG>TT	uc001uti.2	+	2	96_97	c.77_78GG>TT	c.(76-78)TGG>TTT	p.W26F		NM_152325	NP_689538	Q8N6G2	CM026_HUMAN	hypothetical protein LOC122046	26										ovary(2)|skin(1)	3		Lung SC(185;0.0281)		all cancers(112;0.0176)|Epithelial(112;0.0768)|OV - Ovarian serous cystadenocarcinoma(117;0.0852)		GACCCCAACTGGGATTCCTATG	0.356			NA											11	49					0	0	0.004672	0	0
MTRF1	9617	broad.mit.edu	37	13	41827091	41827091	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:41827091T>C	uc001uxx.2	-	6	1053	c.583A>G	c.(583-585)ACT>GCT	p.T195A	MTRF1_uc001uxy.2_Missense_Mutation_p.T195A|MTRF1_uc001uxz.2_Missense_Mutation_p.T31A|MTRF1_uc010tff.1_Missense_Mutation_p.T208A|MTRF1_uc001uyc.1_Missense_Mutation_p.T195A	NM_004294	NP_004285	O75570	RF1M_HUMAN	mitochondrial translational release factor 1	195					regulation of translational termination	mitochondrion	translation release factor activity, codon specific				0		Lung NSC(96;4.52e-06)|Breast(139;0.00123)|Prostate(109;0.0181)|Lung SC(185;0.0262)|Hepatocellular(98;0.114)|Ovarian(182;0.125)		OV - Ovarian serous cystadenocarcinoma(117;4.24e-10)|all cancers(112;2.05e-09)|Epithelial(112;2.48e-09)|GBM - Glioblastoma multiforme(144;0.00115)|BRCA - Breast invasive adenocarcinoma(63;0.0721)|KIRC - Kidney renal clear cell carcinoma(186;0.248)		TGACCTCCAGTAGTCCTTCCA	0.313			NA											18	36					0	0	0.006122	0	0
TNFSF11	8600	broad.mit.edu	37	13	43155388	43155388	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:43155388T>A	uc001uyu.2	+	2	495	c.346T>A	c.(346-348)TGT>AGT	p.C116S	TNFSF11_uc001uyt.2_Missense_Mutation_p.C43S	NM_003701	NP_003692	O14788	TNF11_HUMAN	tumor necrosis factor ligand superfamily, member	116	Extracellular (Potential).				immune response|monocyte chemotaxis|osteoclast differentiation|positive regulation of bone resorption|positive regulation of corticotropin-releasing hormone secretion|positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling|positive regulation of fever generation by positive regulation of prostaglandin secretion|positive regulation of homotypic cell-cell adhesion|positive regulation of NF-kappaB transcription factor activity|positive regulation of osteoclast differentiation|positive regulation of T cell activation	cytoplasm|extracellular space|integral to plasma membrane	cytokine activity|receptor activity|tumor necrosis factor receptor binding				0		Lung NSC(96;1.11e-05)|Breast(139;0.00868)|Prostate(109;0.0181)|Lung SC(185;0.0262)|Hepatocellular(98;0.114)		OV - Ovarian serous cystadenocarcinoma(117;0.000249)|GBM - Glioblastoma multiforme(144;0.00119)|BRCA - Breast invasive adenocarcinoma(63;0.073)		ACCTGATTCATGTAGGAGAAT	0.403			NA											18	64					0	0	0.007413	0	0
MYCBP2	23077	broad.mit.edu	37	13	77670506	77670506	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:77670506C>A	uc001vkf.2	-	58	9872	c.9781G>T	c.(9781-9783)GTA>TTA	p.V3261L	MYCBP2_uc010aev.2_Missense_Mutation_p.V2665L	NM_015057	NP_055872	O75592	MYCB2_HUMAN	MYC binding protein 2	3261					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	ligase activity|protein binding|zinc ion binding			ovary(4)|breast(4)|skin(3)|lung(2)|pancreas(1)	14		Breast(118;0.212)|Acute lymphoblastic leukemia(28;0.22)		GBM - Glioblastoma multiforme(99;0.109)		CGATCACATACCAGATACCAA	0.438			NA											44	132					2.13384e-23	2.99445e-23	0.01441	1	0
HS6ST3	266722	broad.mit.edu	37	13	97485168	97485168	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr13:97485168C>G	uc001vmw.2	+	2	1156	c.1132C>G	c.(1132-1134)CAG>GAG	p.Q378E		NM_153456	NP_703157	Q8IZP7	H6ST3_HUMAN	heparan sulfate 6-O-sulfotransferase 3	378	Lumenal (Potential).					integral to membrane	sulfotransferase activity			ovary(1)|skin(1)	2	all_neural(89;0.0878)|Medulloblastoma(90;0.163)					CCCCTTCACACAGTTCAACAT	0.498			NA											27	81					0	0	0.003954	0	0
SSTR1	6751	broad.mit.edu	37	14	38679155	38679155	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr14:38679155C>T	uc001wul.1	+	3	1178	c.561C>T	c.(559-561)CTC>CTT	p.L187L	SSTR1_uc010amu.1_Intron	NM_001049	NP_001040	P30872	SSR1_HUMAN	somatostatin receptor 1	187	Helical; Name=4; (Potential).				digestion|G-protein signaling, coupled to cyclic nucleotide second messenger|negative regulation of cell proliferation|response to nutrient	integral to plasma membrane	somatostatin receptor activity			central_nervous_system(3)|ovary(1)|lung(1)	5	Hepatocellular(127;0.213)|Esophageal squamous(585;0.22)		Lung(238;3.93e-06)|LUAD - Lung adenocarcinoma(48;2.62e-05)|Epithelial(34;0.187)	GBM - Glioblastoma multiforme(112;0.00444)	Octreotide(DB00104)	TATCGCTGCTCGTCATCCTGC	0.662			NA											10	38					0	0	0.010729	0	0
DDHD1	80821	broad.mit.edu	37	14	53529739	53529739	+	Missense_Mutation	SNP	T	T	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr14:53529739T>G	uc001xai.2	-	7	1918	c.1688A>C	c.(1687-1689)GAA>GCA	p.E563A	DDHD1_uc001xaj.2_Missense_Mutation_p.E570A|DDHD1_uc001xah.2_Missense_Mutation_p.E563A|DDHD1_uc001xag.2_Missense_Mutation_p.E145A|DDHD1_uc001xak.1_5'Flank	NM_001160148	NP_001153620	Q8NEL9	DDHD1_HUMAN	DDHD domain containing 1 isoform c	563					lipid catabolic process	cytoplasm	hydrolase activity|metal ion binding			ovary(2)	2	Breast(41;0.037)					CAACTCTTCTTCCTTTTGCAG	0.383			NA											48	114					0	0	0.01441	0	0
SLC8A3	6547	broad.mit.edu	37	14	70634960	70634960	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr14:70634960C>A	uc001xly.2	-	2	934	c.180G>T	c.(178-180)CTG>CTT	p.L60L	SLC8A3_uc001xlw.2_Silent_p.L60L|SLC8A3_uc001xlx.2_Silent_p.L60L|SLC8A3_uc001xlz.2_Silent_p.L60L|SLC8A3_uc010ara.2_RNA	NM_183002	NP_892114	P57103	NAC3_HUMAN	solute carrier family 8 (sodium/calcium	60	Extracellular (Potential).				cell communication|platelet activation	integral to membrane|plasma membrane	calcium:sodium antiporter activity|calmodulin binding			skin(3)|ovary(2)|breast(2)	7				BRCA - Breast invasive adenocarcinoma(234;0.0079)|all cancers(60;0.0102)|OV - Ovarian serous cystadenocarcinoma(108;0.0555)		ACCAGATTGGCAGGATGACAC	0.552			NA											13	24					0.000151284	0.000160779	0.001855	1	0
ADAM21P1	145241	broad.mit.edu	37	14	70713288	70713288	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr14:70713288T>A	uc010ttg.1	-	1	1231	c.580A>T	c.(580-582)ATC>TTC	p.I194F		NR_003951				SubName: Full=ADAM21-like protein;												0						GTATTCATGATGCAACCTCTT	0.428			NA											45	208					0	0	0.013114	0	0
PCNX	22990	broad.mit.edu	37	14	71485796	71485796	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr14:71485796C>G	uc001xmo.2	+	12	3513	c.3067C>G	c.(3067-3069)CTT>GTT	p.L1023V	PCNX_uc010are.1_Missense_Mutation_p.L912V|PCNX_uc010arf.1_5'UTR	NM_014982	NP_055797	Q96RV3	PCX1_HUMAN	pecanex-like 1	1023	Helical; (Potential).					integral to membrane				ovary(1)	1			KIRC - Kidney renal clear cell carcinoma(12;0.206)	all cancers(60;0.00835)|BRCA - Breast invasive adenocarcinoma(234;0.00951)|OV - Ovarian serous cystadenocarcinoma(108;0.0417)		GGGATCTATTCTTCTCATACA	0.433			NA											41	121					0	0	0.007835	0	0
ASB2	51676	broad.mit.edu	37	14	94417386	94417386	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr14:94417386T>C	uc001ycc.1	-	4	1184	c.695A>G	c.(694-696)CAG>CGG	p.Q232R	ASB2_uc001ycd.2_Missense_Mutation_p.Q280R|ASB2_uc001yce.1_Missense_Mutation_p.Q178R	NM_016150	NP_057234	Q96Q27	ASB2_HUMAN	ankyrin repeat and SOCS box-containing protein	232	ANK 6.				intracellular signal transduction			p.Q232H(1)		ovary(1)|pancreas(1)	2		all_cancers(154;0.13)		COAD - Colon adenocarcinoma(157;0.217)|Epithelial(152;0.232)		CTGTCCACTCTGGGCGGCCAC	0.587			NA											82	199					0	0	0.01441	0	0
GOLGA6L6	727832	broad.mit.edu	37	15	20743796	20743796	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:20743796C>T	uc001ytk.2	-	4	499	c.408G>A	c.(406-408)ACG>ACA	p.T136T		NM_001145004	NP_001138476	A8MZA4	GG6L6_HUMAN	golgi autoantigen, golgin subfamily a, 6-like 6	136	Potential.										0						TTTTCTGACACGTAAGGATTC	0.493			NA											4	47					0	0	0.009096	0	0
HERC2	8924	broad.mit.edu	37	15	28460848	28460848	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:28460848G>A	uc001zbj.2	-	39	6235	c.6129C>T	c.(6127-6129)CTC>CTT	p.L2043L		NM_004667	NP_004658	O95714	HERC2_HUMAN	hect domain and RLD 2	2043					DNA repair|intracellular protein transport|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	nucleus	guanyl-nucleotide exchange factor activity|heme binding|protein binding|ubiquitin-protein ligase activity|zinc ion binding			ovary(4)|lung(4)|skin(3)|upper_aerodigestive_tract(1)|central_nervous_system(1)	13		all_lung(180;1.3e-11)|Breast(32;0.000194)|Colorectal(260;0.227)		all cancers(64;3.93e-09)|Epithelial(43;9.99e-08)|BRCA - Breast invasive adenocarcinoma(123;0.0271)|GBM - Glioblastoma multiforme(186;0.0497)|Lung(196;0.199)		GCGGGGAGCTGAGGGCGCCGC	0.632			NA											13	26					0	0	0.001855	0	0
CHRFAM7A	89832	broad.mit.edu	37	15	30664536	30664536	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:30664536C>A	uc001zdt.1	-	7	903	c.337G>T	c.(337-339)GGC>TGC	p.G113C	DKFZP434L187_uc001zds.2_Intron|CHRFAM7A_uc001zdu.1_Missense_Mutation_p.G22C|CHRFAM7A_uc010azn.2_Missense_Mutation_p.G22C	NM_139320	NP_647536	Q494W8	CRFM7_HUMAN	CHRNA7-FAM7A fusion isoform 1	113						integral to membrane|postsynaptic membrane	extracellular ligand-gated ion channel activity			skin(1)	1		all_lung(180;3.42e-11)|Breast(32;0.000153)		all cancers(64;1.9e-15)|Epithelial(43;3.59e-12)|GBM - Glioblastoma multiforme(186;9e-05)|BRCA - Breast invasive adenocarcinoma(123;0.00177)|Lung(196;0.153)		CTCCTCTTGCCGGGGATTCCT	0.428			NA											5	11					2.74318e-10	3.38237e-10	0.006214	1	0
SHC4	399694	broad.mit.edu	37	15	49255125	49255125	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:49255125A>G	uc001zxb.1	-	1	517	c.88T>C	c.(88-90)TAC>CAC	p.Y30H		NM_203349	NP_976224	Q6S5L8	SHC4_HUMAN	rai-like protein	30	CH2.				intracellular signal transduction	cell junction|postsynaptic membrane				ovary(3)|pancreas(2)	5		all_lung(180;0.00466)		all cancers(107;9.4e-08)|GBM - Glioblastoma multiforme(94;5.94e-07)		AAGCGGCTGTACTTGGCCCTG	0.652			NA											36	86					0	0	0.007835	0	0
C15orf33	196951	broad.mit.edu	37	15	49800505	49800505	+	Silent	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:49800505C>G	uc001zxl.2	-	11	1209	c.915G>C	c.(913-915)CTG>CTC	p.L305L	C15orf33_uc001zxm.2_Silent_p.L271L	NM_152647	NP_689860	Q96M60	CO033_HUMAN	hypothetical protein LOC196951	305										ovary(1)	1		all_lung(180;0.00187)		all cancers(107;3.45e-08)|GBM - Glioblastoma multiforme(94;0.000124)		AGAGTTCTTTCAGTTTCCAGT	0.318			NA											26	69					0	0	0.00632	0	0
ATP8B4	79895	broad.mit.edu	37	15	50168535	50168535	+	Silent	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:50168535A>T	uc001zxu.2	-	25	3109	c.2967T>A	c.(2965-2967)GCT>GCA	p.A989A	ATP8B4_uc010ber.2_Silent_p.A862A|ATP8B4_uc010ufd.1_Silent_p.A799A|ATP8B4_uc010ufe.1_RNA|ATP8B4_uc001zxt.2_5'UTR	NM_024837	NP_079113	Q8TF62	AT8B4_HUMAN	ATPase class I type 8B member 4	989	Extracellular (Potential).				ATP biosynthetic process	integral to membrane	ATP binding|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism|magnesium ion binding|phospholipid-translocating ATPase activity			skin(3)|ovary(2)|breast(2)|large_intestine(1)	8		all_lung(180;0.00183)		all cancers(107;2.41e-07)|GBM - Glioblastoma multiforme(94;8.28e-05)		ACTGGTAGTCAGCAATATGTT	0.468			NA											12	54					0	0	0.010729	0	0
LRRC49	54839	broad.mit.edu	37	15	71185957	71185957	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:71185957C>T	uc002asw.2	+	2	330	c.83C>T	c.(82-84)TCA>TTA	p.S28L	LRRC49_uc002asu.2_Missense_Mutation_p.S18L|LRRC49_uc002asx.2_5'UTR|LRRC49_uc010ukf.1_Missense_Mutation_p.S28L|LRRC49_uc002asy.2_5'Flank|LRRC49_uc002asz.2_5'Flank|THAP10_uc002asv.2_5'Flank	NM_017691	NP_060161	Q8IUZ0	LRC49_HUMAN	leucine rich repeat containing 49	28						cytoplasm|microtubule				ovary(1)	1						ATTCAAACATCATCGCTTCCT	0.294			NA											12	47					0	0	0.00245	0	0
MPI	4351	broad.mit.edu	37	15	75185067	75185067	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:75185067G>C	uc002azc.1	+	4	416	c.411G>C	c.(409-411)GAG>GAC	p.E137D	MPI_uc010ulv.1_Missense_Mutation_p.E137D|MPI_uc010ulw.1_Missense_Mutation_p.E87D|MPI_uc002azd.1_Missense_Mutation_p.E137D|MPI_uc010ulx.1_Missense_Mutation_p.E87D|MPI_uc002aze.1_Missense_Mutation_p.E137D	NM_002435	NP_002426	P34949	MPI_HUMAN	mannose-6- phosphate isomerase	137		Zinc (By similarity).			dolichol-linked oligosaccharide biosynthetic process|GDP-mannose biosynthetic process|post-translational protein modification|protein N-linked glycosylation via asparagine	cytosol	mannose-6-phosphate isomerase activity|zinc ion binding			ovary(2)	2						ACAAGCCAGAGATGGCCATTG	0.587			NA											3	51					0	0	0.004672	0	0
IL16	3603	broad.mit.edu	37	15	81575082	81575082	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr15:81575082T>A	uc002bgh.3	+	9	1560	c.1184T>A	c.(1183-1185)CTG>CAG	p.L395Q	IL16_uc002bgc.2_RNA|IL16_uc010blq.1_Missense_Mutation_p.L395Q|IL16_uc002bge.3_RNA|IL16_uc010unp.1_Missense_Mutation_p.L437Q|IL16_uc002bgg.2_Missense_Mutation_p.L395Q|IL16_uc002bgi.1_5'UTR	NM_172217	NP_757366	Q14005	IL16_HUMAN	interleukin 16 isoform 2	395	PDZ 2.|Interaction with GRIN2A.				immune response|interspecies interaction between organisms|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|extracellular space|nucleus|plasma membrane	cytokine activity			ovary(2)|lung(1)|skin(1)	4						GTGGCGCACCTGGACGGACGT	0.547			NA											43	207					0	0	0.01441	0	0
SOX8	30812	broad.mit.edu	37	16	1035178	1035178	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr16:1035178G>A	uc002ckn.2	+	3	1248	c.1133G>A	c.(1132-1134)GGC>GAC	p.G378D		NM_014587	NP_055402	P57073	SOX8_HUMAN	SRY (sex determining region Y)-box 8	378					adipose tissue development|enteric nervous system development|fat cell differentiation|in utero embryonic development|metanephric nephron tubule formation|morphogenesis of a branching epithelium|negative regulation of apoptosis|negative regulation of myoblast differentiation|negative regulation of transcription, DNA-dependent|neural crest cell migration|oligodendrocyte differentiation|osteoblast differentiation|peripheral nervous system development|positive regulation of branching involved in ureteric bud morphogenesis|positive regulation of gliogenesis|positive regulation of osteoblast proliferation|positive regulation of transcription from RNA polymerase II promoter|regulation of hormone levels|renal vesicle induction|retinal rod cell differentiation|Sertoli cell development|signal transduction|spermatogenesis|ureter morphogenesis	cytoplasm|nucleus				central_nervous_system(1)|skin(1)	2		Hepatocellular(780;0.00308)				cccTTCGCCGGCTCACAGGGC	0.612			NA											3	28					0	0	0.004672	0	0
ZDHHC1	29800	broad.mit.edu	37	16	67428917	67428917	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr16:67428917C>A	uc010vjm.1	-	10	1522	c.1218G>T	c.(1216-1218)CGG>CGT	p.R406R	TPPP3_uc002eta.2_5'Flank|TPPP3_uc002etb.2_5'Flank	NM_013304	NP_037436	Q8WTX9	ZDHC1_HUMAN	zinc finger, DHHC-type containing 1	406						integral to membrane	DNA binding|zinc ion binding				0		Ovarian(137;0.223)		UCEC - Uterine corpus endometrioid carcinoma (183;0.0178)|all cancers(182;5.71e-53)|Epithelial(162;4.73e-52)|OV - Ovarian serous cystadenocarcinoma(108;1.53e-29)|Kidney(780;4.37e-05)|BRCA - Breast invasive adenocarcinoma(181;5.8e-05)|GBM - Glioblastoma multiforme(240;0.0022)		GACGCCGGATCCGAGGTCTCA	0.632			NA											4	20					0.00909568	0.00931574	0.009096	1	0
TSR1	55720	broad.mit.edu	37	17	2239378	2239378	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:2239378C>A	uc002fuj.2	-	2	1111	c.154G>T	c.(154-156)GAC>TAC	p.D52Y	SGSM2_uc002fum.3_5'Flank|SGSM2_uc010vqw.1_5'Flank|SGSM2_uc002fun.3_5'Flank	NM_018128	NP_060598	Q2NL82	TSR1_HUMAN	TSR1, 20S rRNA accumulation	52					ribosome assembly	nucleolus	protein binding			ovary(1)	1						TGCCTCTGGTCGACTCTGCTG	0.567			NA											31	87					7.63091e-17	1.02553e-16	0.007835	1	0
SGSM2	9905	broad.mit.edu	37	17	2274591	2274591	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:2274591C>T	uc002fun.3	+	12	1499	c.1324C>T	c.(1324-1326)CCC>TCC	p.P442S	SGSM2_uc002fum.3_Missense_Mutation_p.P487S|SGSM2_uc010vqw.1_Missense_Mutation_p.P442S|SGSM2_uc002fuo.2_Missense_Mutation_p.P30S	NM_001098509	NP_001091979	O43147	SGSM2_HUMAN	RUN and TBC1 domain containing 1 isoform 2	442						intracellular	Rab GTPase activator activity				0				Colorectal(2;5.15e-05)|READ - Rectum adenocarcinoma(2;0.000115)		GGGCTTTGGGCCCAGCCTGCC	0.662			NA											15	25					0	0	0.003163	0	0
OR1D2	4991	broad.mit.edu	37	17	2995442	2995442	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:2995442C>T	uc010vrb.1	-	1	849	c.849G>A	c.(847-849)ATG>ATA	p.M283I		NM_002548	NP_002539	P34982	OR1D2_HUMAN	olfactory receptor, family 1, subfamily D,	283	Helical; Name=7; (Potential).				cellular component movement|chemotaxis|protein import into nucleus, translocation|sensory perception of smell|single fertilization	integral to plasma membrane	olfactory receptor activity			ovary(1)	1						AGGGATTCATCATGGGTGTCA	0.473			NA											23	69					0	0	0.012319	0	0
ASGR2	433	broad.mit.edu	37	17	7012167	7012167	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:7012167G>A	uc002gep.3	-	3	430	c.165C>T	c.(163-165)TCC>TCT	p.S55S	ASGR2_uc010vtk.1_5'Flank|ASGR2_uc002gem.1_5'UTR|ASGR2_uc002gen.1_Silent_p.S36S|ASGR2_uc002geo.1_Silent_p.S55S|ASGR2_uc002ger.3_Silent_p.S55S|ASGR2_uc002geq.3_Silent_p.S36S|ASGR2_uc010clw.2_Silent_p.S36S|ASGR2_uc010vtl.1_RNA	NM_001181	NP_001172	P07307	ASGR2_HUMAN	asialoglycoprotein receptor 2 isoform a	55	Cytoplasmic (Potential).				cell surface receptor linked signaling pathway|endocytosis	focal adhesion|integral to membrane|nucleolus	asialoglycoprotein receptor activity|protein binding|sugar binding			ovary(1)	1					Antihemophilic Factor(DB00025)	AGCAGACCATGGAGCAGAGAC	0.647			NA											6	3					0	0	0.001168	0	0
C17orf81	23587	broad.mit.edu	37	17	7155866	7155866	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:7155866G>A	uc002gfg.1	+	2	152	c.45G>A	c.(43-45)TTG>TTA	p.L15L	DULLARD_uc002gfd.2_5'Flank|DULLARD_uc002gfe.2_5'Flank|DULLARD_uc002gff.2_5'Flank|DULLARD_uc002gfc.2_5'Flank|C17orf81_uc002gfj.2_Silent_p.L15L|C17orf81_uc010cmb.2_Silent_p.L15L|C17orf81_uc002gfh.1_Silent_p.L15L|C17orf81_uc002gfi.1_Silent_p.L15L|C17orf81_uc002gfk.1_Silent_p.L15L|C17orf81_uc002gfl.1_Silent_p.L15L	NM_203415	NP_981960	Q8TE02	DERP6_HUMAN	S-phase 2 protein isoform 4	15					regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|nucleus	protein binding				0						GACGCGAGTTGGAGATGTTGG	0.701			NA											7	15					0	0	0.00308	0	0
NOS2	4843	broad.mit.edu	37	17	26086080	26086080	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:26086080G>A	uc002gzu.2	-	26	3445	c.3181C>T	c.(3181-3183)CGG>TGG	p.R1061W		NM_000625	NP_000616	P35228	NOS2_HUMAN	nitric oxide synthase 2A	1061					arginine catabolic process|defense response to Gram-negative bacterium|innate immune response in mucosa|nitric oxide biosynthetic process|peptidyl-cysteine S-nitrosylation|platelet activation|positive regulation of killing of cells of other organism|positive regulation of leukocyte mediated cytotoxicity|regulation of cellular respiration|regulation of insulin secretion|superoxide metabolic process	cytosol|nucleus	arginine binding|calmodulin binding|flavin adenine dinucleotide binding|FMN binding|heme binding|NADP binding|nitric-oxide synthase activity|protein homodimerization activity|tetrahydrobiopterin binding			skin(2)|ovary(1)|breast(1)	4					Dexamethasone(DB01234)|Hydrocortisone(DB00741)|L-Arginine(DB00125)|L-Citrulline(DB00155)	AGCTGCTGCCGCAGGATGTCC	0.622			NA											8	17					0	0	0.004482	0	0
SARM1	23098	broad.mit.edu	37	17	26712168	26712168	+	Missense_Mutation	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:26712168A>T	uc010crl.1	+	8	1571	c.1504A>T	c.(1504-1506)ACC>TCC	p.T502S	SARM1_uc010waj.1_RNA|SARM1_uc002hbe.1_Missense_Mutation_p.T46S	NM_015077	NP_055892	Q6SZW1	SARM1_HUMAN	sterile alpha and TIR motif containing 1	502	SAM 2.				innate immune response	cytoplasm|intrinsic to membrane	binding|transmembrane receptor activity				0	all_lung(13;0.000533)|Lung NSC(42;0.00171)			UCEC - Uterine corpus endometrioid carcinoma (53;0.154)		CCGCCAGTACACCTACGGCCT	0.672			NA											7	29					0	0	0.001984	0	0
PIGS	94005	broad.mit.edu	37	17	26888589	26888589	+	Missense_Mutation	SNP	C	C	T	rs138187632		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:26888589C>T	uc002hbo.2	-	6	900	c.527G>A	c.(526-528)CGG>CAG	p.R176Q	PIGS_uc002hbn.2_Missense_Mutation_p.R168Q|PIGS_uc010wap.1_Missense_Mutation_p.R115Q	NM_033198	NP_149975	Q96S52	PIGS_HUMAN	phosphatidylinositol glycan anchor biosynthesis,	176	Lumenal (Potential).				attachment of GPI anchor to protein|C-terminal protein lipidation	GPI-anchor transamidase complex	protein binding			breast(2)|urinary_tract(1)|kidney(1)	4	Lung NSC(42;0.00431)					AAAGGCCTCCCGGTGCATTAT	0.572			NA											11	17					0	0	0.010729	0	0
KRT32	3882	broad.mit.edu	37	17	39619225	39619225	+	Silent	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:39619225G>T	uc002hwr.2	-	6	1135	c.1074C>A	c.(1072-1074)ATC>ATA	p.I358I		NM_002278	NP_002269	Q14532	K1H2_HUMAN	keratin 32	358	Coil 2.|Rod.				epidermis development	intermediate filament	protein binding|structural molecule activity				0		Breast(137;0.000812)				CAACGTTGGTGATCATGCACT	0.632			NA											31	80					1.55811e-20	2.16262e-20	0.008361	1	0
RPS6KB1	6198	broad.mit.edu	37	17	58018242	58018242	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:58018242C>G	uc002ixy.2	+	13	1268	c.1165C>G	c.(1165-1167)CAG>GAG	p.Q389E	RPS6KB1_uc010ddj.1_Missense_Mutation_p.Q389E|RPS6KB1_uc010wom.1_Missense_Mutation_p.Q336E|RPS6KB1_uc010won.1_Missense_Mutation_p.Q366E|RPS6KB1_uc010woo.1_Missense_Mutation_p.Q324E	NM_003161	NP_003152	P23443	KS6B1_HUMAN	ribosomal protein S6 kinase, 70kDa, polypeptide	389	AGC-kinase C-terminal.				apoptosis|G1/S transition of mitotic cell cycle|insulin receptor signaling pathway|negative regulation of apoptosis|phosphatidylinositol-mediated signaling|positive regulation of mitotic cell cycle|positive regulation of translational initiation|TOR signaling cascade	cell junction|cytoplasm|cytosol|mitochondrial outer membrane|nucleus|nucleus|synapse|synaptosome	ATP binding|protein binding|protein kinase activity			large_intestine(1)	1	all_cancers(5;1.63e-13)|Breast(5;2.91e-25)|all_neural(34;0.0878)|Medulloblastoma(34;0.0922)		Epithelial(12;3.57e-12)|all cancers(12;6.41e-11)			GTTTACACGTCAGACACCTGT	0.358			NA											20	85					0	0	0.00333	0	0
APOH	350	broad.mit.edu	37	17	64208278	64208278	+	Silent	SNP	A	A	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:64208278A>C	uc002jfn.3	-	8	1070	c.1011T>G	c.(1009-1011)ACT>ACG	p.T337T		NM_000042	NP_000033	P02749	APOH_HUMAN	apolipoprotein H precursor	337	Sushi-like.				blood coagulation, intrinsic pathway|negative regulation of angiogenesis|negative regulation of blood coagulation|negative regulation of endothelial cell migration|negative regulation of endothelial cell proliferation|negative regulation of fibrinolysis|negative regulation of myeloid cell apoptosis|negative regulation of smooth muscle cell apoptosis|plasminogen activation|positive regulation of lipoprotein lipase activity|triglyceride metabolic process|triglyceride transport	cell surface|chylomicron|high-density lipoprotein particle|very-low-density lipoprotein particle	eukaryotic cell surface binding|glycoprotein binding|heparin binding|lipoprotein lipase activator activity|phospholipid binding				0			BRCA - Breast invasive adenocarcinoma(6;9.74e-08)			CGGATGCATCAGTTTTCCAAA	0.358	Melanoma(155;624 1882 16869 48804 51309)		NA											9	65					0	0	0.004482	0	0
UNK	85451	broad.mit.edu	37	17	73780814	73780814	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:73780814C>T	uc002jpm.2	+	2	81	c.81C>T	c.(79-81)GAC>GAT	p.D27D	UNK_uc002jpn.2_RNA|UNK_uc002jpo.2_RNA	NM_001080419	NP_001073888	Q9C0B0	UNK_HUMAN	zinc finger CCCH-type domain containing 5	Error:Variant_position_missing_in_Q9C0B0_after_alignment							nucleic acid binding|zinc ion binding				0			all cancers(21;2.61e-06)|Epithelial(20;7.39e-06)|BRCA - Breast invasive adenocarcinoma(9;0.00194)|LUSC - Lung squamous cell carcinoma(166;0.154)			TCCAGCCGGACATAGAACCAC	0.642			NA											11	22					0	0	0.001855	0	0
PRPSAP1	5635	broad.mit.edu	37	17	74328494	74328494	+	Nonsense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:74328494C>A	uc010wta.1	-	4	759	c.313G>T	c.(313-315)GAG>TAG	p.E105*	PRPSAP1_uc010wtb.1_Nonsense_Mutation_p.E2*	NM_002766	NP_002757	Q14558	KPRA_HUMAN	phosphoribosyl pyrophosphate	76					nucleotide biosynthetic process		enzyme inhibitor activity|identical protein binding|magnesium ion binding|ribose phosphate diphosphokinase activity			ovary(1)	1						ATGAGCAACTCCATCACAGCT	0.428			NA											22	79					1.28384e-07	1.49585e-07	0.012319	1	0
FN3KRP	79672	broad.mit.edu	37	17	80676808	80676808	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr17:80676808G>T	uc002kfu.2	+	2	218	c.168G>T	c.(166-168)ATG>ATT	p.M56I	FN3KRP_uc010wvr.1_Missense_Mutation_p.M6I	NM_024619	NP_078895	Q9HA64	KT3K_HUMAN	fructosamine 3 kinase related protein	56							kinase activity				0	Breast(20;0.000523)|all_neural(118;0.0952)		BRCA - Breast invasive adenocarcinoma(99;0.0344)|OV - Ovarian serous cystadenocarcinoma(97;0.061)			AAGGTGAGATGGCAAGTTTAA	0.502			NA											51	88					2.59344e-38	3.74281e-38	0.01441	1	0
ASXL3	80816	broad.mit.edu	37	18	31318469	31318469	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr18:31318469G>T	uc010dmg.1	+	11	1156	c.1101G>T	c.(1099-1101)GAG>GAT	p.E367D	ASXL3_uc002kxq.2_Missense_Mutation_p.E74D	NM_030632	NP_085135	Q9C0F0	ASXL3_HUMAN	additional sex combs like 3	367					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	metal ion binding			ovary(2)|pancreas(1)	3						TGTCAAGAGAGGAATCTGTGA	0.433			NA											7	11					0.00307968	0.0032059	0.00308	1	0
DTNA	1837	broad.mit.edu	37	18	32407563	32407563	+	Silent	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr18:32407563C>G	uc010dmn.1	+	10	1018	c.1017C>G	c.(1015-1017)CCC>CCG	p.P339P	DTNA_uc002kxu.2_Silent_p.P339P|DTNA_uc010xbx.1_Intron|DTNA_uc002kxv.3_Silent_p.P339P|DTNA_uc002kxw.2_Silent_p.P339P|DTNA_uc002kxx.2_Silent_p.P336P|DTNA_uc010dmj.2_Silent_p.P336P|DTNA_uc002kxz.2_Silent_p.P336P|DTNA_uc002kxy.2_Silent_p.P336P|DTNA_uc010dmk.1_Intron|DTNA_uc010dml.2_Silent_p.P336P|DTNA_uc002kyb.3_Silent_p.P336P|DTNA_uc010dmm.2_Silent_p.P339P|DTNA_uc010xby.1_Silent_p.P86P|DTNA_uc010dmo.2_Silent_p.P18P|DTNA_uc002kyd.3_Silent_p.P18P|DTNA_uc010xbz.1_Silent_p.P18P|DTNA_uc010xca.1_Silent_p.P18P|DTNA_uc002kye.2_Silent_p.P18P	NM_001390	NP_001381	Q9Y4J8	DTNA_HUMAN	dystrobrevin alpha isoform 1	339					neuromuscular synaptic transmission|signal transduction|striated muscle contraction	cell junction|cytoplasm|synapse	calcium ion binding|protein binding|zinc ion binding				0						TTAGGCCTCCCAGACCTGTAA	0.438			NA											21	109					0	0	0.00278	0	0
ZNF532	55205	broad.mit.edu	37	18	56651465	56651465	+	Missense_Mutation	SNP	G	G	A	rs142104041		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr18:56651465G>A	uc002lho.2	+	11	4220	c.3673G>A	c.(3673-3675)GTA>ATA	p.V1225I	ZNF532_uc002lhp.2_Missense_Mutation_p.V1223I|ZNF532_uc010xeg.1_Missense_Mutation_p.V1223I|ZNF532_uc002lhr.2_Missense_Mutation_p.V1223I|ZNF532_uc002lhs.2_Missense_Mutation_p.V1223I|ZNF532_uc010xeh.1_Missense_Mutation_p.V313I	NM_018181	NP_060651	Q9HCE3	ZN532_HUMAN	zinc finger protein 532	1225	C2H2-type 11.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(1)|skin(1)	2						CCTCTTCATCGTACACAAGTT	0.532			NA											11	38					0	0	0.013537	0	0
SERPINB11	89778	broad.mit.edu	37	18	61377489	61377489	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr18:61377489G>T	uc002ljk.3	+	2	124	c.62G>T	c.(61-63)AGT>ATT	p.S21I	SERPINB11_uc010xes.1_5'UTR|SERPINB11_uc010dqd.2_5'UTR|SERPINB11_uc002ljj.3_5'UTR|SERPINB11_uc010dqe.2_5'UTR|SERPINB11_uc010dqf.2_Missense_Mutation_p.S21I	NM_080475	NP_536723	Q96P15	SPB11_HUMAN	serpin peptidase inhibitor, clade B, member 11	21					regulation of proteolysis	cytoplasm	serine-type endopeptidase inhibitor activity			breast(1)	1		Esophageal squamous(42;0.129)				GAGCTGAACAGTAACAACATA	0.438	Ovarian(27;496 784 5942 8975 23930)		NA											15	17					3.27435e-08	3.90463e-08	0.00245	1	0
LRRC8E	80131	broad.mit.edu	37	19	7963879	7963879	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:7963879G>A	uc002mir.2	+	3	573	c.472G>A	c.(472-474)GAC>AAC	p.D158N		NM_025061	NP_079337	Q6NSJ5	LRC8E_HUMAN	leucine rich repeat containing 8 family, member	158						integral to membrane				lung(1)|pancreas(1)	2						CAAGTGTTTCGACTCTCCATG	0.577			NA											6	121					0	0	0.001168	0	0
MUC16	94025	broad.mit.edu	37	19	9011464	9011464	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:9011464C>T	uc002mkp.2	-	36	38973	c.38769G>A	c.(38767-38769)ATG>ATA	p.M12923I	MUC16_uc010xki.1_Intron	NM_024690	NP_078966	Q8WXI7	MUC16_HUMAN	mucin 16	Error:AA_residue_mismatch_between_GAF_and_UniProt_prot_seqs_after_alignment					cell adhesion	extracellular space|extrinsic to membrane|integral to membrane|plasma membrane	protein binding			lung(30)|ovary(15)|breast(8)|large_intestine(1)|skin(1)|prostate(1)|pancreas(1)	57						AGATGGCATCCATTCCAGTGG	0.537			NA											15	130					0	0	0.006122	0	0
ZNF676	163223	broad.mit.edu	37	19	22363587	22363587	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:22363587C>G	uc002nqs.1	-	3	1250	c.932G>C	c.(931-933)TGT>TCT	p.C311S		NM_001001411	NP_001001411	Q8N7Q3	ZN676_HUMAN	zinc finger protein 676	311	C2H2-type 6.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0		Lung NSC(12;0.0207)|all_lung(12;0.0214)|all_epithelial(12;0.114)				ACATTCTTCACACTTGTAGGG	0.443			NA											5	99					0	0	0.00308	0	0
PLEKHF1	79156	broad.mit.edu	37	19	30165102	30165102	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:30165102G>A	uc002nsh.3	+	2	458	c.356G>A	c.(355-357)CGC>CAC	p.R119H	PLEKHF1_uc002nsi.3_Missense_Mutation_p.R204H	NM_024310	NP_077286	Q96S99	PKHF1_HUMAN	apoptosis-inducing protein D	119	PH.				apoptosis	lysosome|nucleus|perinuclear region of cytoplasm	metal ion binding				0	Ovarian(5;0.000567)|Breast(6;0.0602)|Esophageal squamous(110;0.239)		UCEC - Uterine corpus endometrioid carcinoma (4;2.65e-06)|STAD - Stomach adenocarcinoma(5;1.7e-06)|Lung(7;0.0623)|LUAD - Lung adenocarcinoma(5;0.0989)|BRCA - Breast invasive adenocarcinoma(6;0.225)			GCTACGGAGCGCCAGGAATGG	0.667			NA											4	41					0	0	0.009096	0	0
ZNF536	9745	broad.mit.edu	37	19	30935517	30935517	+	Missense_Mutation	SNP	T	T	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:30935517T>G	uc002nsu.1	+	2	1186	c.1048T>G	c.(1048-1050)TGC>GGC	p.C350G	ZNF536_uc010edd.1_Missense_Mutation_p.C350G	NM_014717	NP_055532	O15090	ZN536_HUMAN	zinc finger protein 536	350	C2H2-type 5.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	zinc ion binding			ovary(7)|large_intestine(2)|skin(2)	11	Esophageal squamous(110;0.0834)					CTGCGAGGTGTGCGGTCAGGT	0.652			NA											56	150					0	0	0.01441	0	0
DPY19L3	147991	broad.mit.edu	37	19	32923654	32923654	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:32923654G>C	uc002ntg.2	+	4	446	c.270G>C	c.(268-270)GAG>GAC	p.E90D	DPY19L3_uc002nth.1_Missense_Mutation_p.E90D	NM_207325	NP_997208	Q6ZPD9	D19L3_HUMAN	dpy-19-like 3	90						integral to membrane				ovary(4)	4	Esophageal squamous(110;0.162)					TCAGAACAGAGTGTGGCCTGT	0.408			NA											15	60					0	0	0.007413	0	0
PEPD	5184	broad.mit.edu	37	19	33980911	33980911	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:33980911C>A	uc002nur.3	-	6	629	c.494G>T	c.(493-495)GGC>GTC	p.G165V	PEPD_uc010xrr.1_Missense_Mutation_p.G165V|PEPD_uc010xrs.1_Missense_Mutation_p.G101V	NM_000285	NP_000276	P12955	PEPD_HUMAN	prolidase isoform 1	165					cellular amino acid metabolic process|collagen catabolic process|proteolysis		aminopeptidase activity|dipeptidase activity|manganese ion binding|metallocarboxypeptidase activity			ovary(2)	2	Esophageal squamous(110;0.137)					CTTGCTGATGCCGTCAAAGGA	0.612			NA											5	18					5.9392e-07	6.73463e-07	0.001168	1	0
ZNF382	84911	broad.mit.edu	37	19	37100919	37100919	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:37100919G>T	uc002oek.2	+	3	216	c.103G>T	c.(103-105)GTG>TTG	p.V35L	ZNF382_uc010efa.2_Intron|ZNF382_uc010efb.2_Missense_Mutation_p.V34L|ZNF382_uc002oel.2_Missense_Mutation_p.V35L	NM_032825	NP_116214	Q96SR6	ZN382_HUMAN	zinc finger protein 382	35	Mediates interaction with TRIM28 (By similarity).|KRAB.|Represses transcription (By similarity).				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0	Esophageal squamous(110;0.198)		COAD - Colon adenocarcinoma(19;0.0454)|Colorectal(19;0.065)			TTACAGGGATGTGATGTTGGA	0.463			NA											16	72					2.31682e-05	2.48301e-05	0.003163	1	0
LILRB2	10288	broad.mit.edu	37	19	54780767	54780767	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:54780767C>A	uc002qfb.2	-	10	1643	c.1377G>T	c.(1375-1377)CTG>CTT	p.L459L	LILRA6_uc002qew.1_Intron|LILRB2_uc010eri.2_Silent_p.L459L|LILRB2_uc010erj.2_RNA|LILRB2_uc002qfc.2_Silent_p.L458L|LILRB2_uc010yet.1_Silent_p.L343L	NM_005874	NP_005865	Q8N423	LIRB2_HUMAN	leukocyte immunoglobulin-like receptor,	459	Extracellular (Potential).				cell surface receptor linked signaling pathway|cell-cell signaling|cellular defense response|immune response|regulation of immune response	integral to plasma membrane|membrane fraction	receptor activity			skin(1)	1	Ovarian(34;0.19)			GBM - Glioblastoma multiforme(193;0.105)		TCACAACCCCCAGGTGCCTTC	0.333			NA											18	33					3.52763e-06	3.91274e-06	0.00499	1	0
NLRP11	204801	broad.mit.edu	37	19	56307481	56307481	+	Silent	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:56307481G>T	uc010ygf.1	-	8	3018	c.2307C>A	c.(2305-2307)GCC>GCA	p.A769A	NLRP11_uc002qlz.2_Silent_p.A616A|NLRP11_uc002qmb.2_Silent_p.A670A|NLRP11_uc002qmc.2_RNA|NLRP11_uc010ete.1_RNA	NM_145007	NP_659444	P59045	NAL11_HUMAN	NLR family, pyrin domain containing 11	769							ATP binding			ovary(3)|upper_aerodigestive_tract(1)|central_nervous_system(1)|skin(1)	6		Colorectal(82;0.0002)		GBM - Glioblastoma multiforme(193;0.0325)		GATGAAGCAAGGCATCACACA	0.483			NA											72	257					1.37693e-34	1.97594e-34	0.01441	1	0
AURKC	6795	broad.mit.edu	37	19	57743553	57743553	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr19:57743553A>G	uc002qoe.2	+	3	446	c.257A>G	c.(256-258)CAC>CGC	p.H86R	AURKC_uc002qoc.2_Missense_Mutation_p.H67R|AURKC_uc002qod.2_Missense_Mutation_p.H52R|AURKC_uc010etv.2_Missense_Mutation_p.H83R	NM_001015878	NP_001015878	Q9UQB9	AURKC_HUMAN	aurora kinase C isoform 1	86	Protein kinase.				cell cycle|cytokinesis	condensed chromosome|cytoplasm|midbody|spindle midzone	ATP binding|protein serine/threonine kinase activity			lung(4)|ovary(2)	6		Colorectal(82;5.46e-05)|all_neural(62;0.0218)|Ovarian(87;0.0822)|Renal(1328;0.157)		UCEC - Uterine corpus endometrioid carcinoma (67;0.168)|GBM - Glioblastoma multiforme(193;0.0122)		GGACTGGAGCACCAGCTGCGC	0.498			NA											12	45					0	0	0.00245	0	0
ROCK2	9475	broad.mit.edu	37	2	11355773	11355773	+	Splice_Site	SNP	T	T	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:11355773T>G	uc002rbd.1	-	14	1911	c.1462_splice	c.e14-1	p.I488_splice		NM_004850	NP_004841	O75116	ROCK2_HUMAN	Rho-associated, coiled-coil containing protein						axon guidance|cytokinesis|intracellular signal transduction	cytosol|plasma membrane	ATP binding|metal ion binding|protein binding|protein serine/threonine kinase activity|structural molecule activity			stomach(2)|skin(2)	4	all_hematologic(175;0.127)|Acute lymphoblastic leukemia(172;0.155)			Epithelial(75;0.137)|OV - Ovarian serous cystadenocarcinoma(76;0.162)		TAAGGTAATCTGAAATAATGC	0.299			NA											11	30					0	0	0.008291	0	0
RAD51AP2	729475	broad.mit.edu	37	2	17696895	17696895	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:17696895G>C	uc002rcl.1	-	1	2812	c.2788C>G	c.(2788-2790)CAA>GAA	p.Q930E	RAD51AP2_uc010exn.1_Missense_Mutation_p.Q921E	NM_001099218	NP_001092688	Q09MP3	R51A2_HUMAN	RAD51 associated protein 2	930										ovary(1)	1	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.158)					GTTTCAAATTGATGATTAATA	0.313			NA											20	45					0	0	0.007413	0	0
PUM2	23369	broad.mit.edu	37	2	20483205	20483205	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:20483205C>A	uc002rds.1	-	10	1357	c.1334G>T	c.(1333-1335)GGT>GTT	p.G445V	PUM2_uc002rdt.1_Missense_Mutation_p.G445V|PUM2_uc002rdr.2_Missense_Mutation_p.G384V|PUM2_uc010yjy.1_Missense_Mutation_p.G445V|PUM2_uc002rdu.1_Missense_Mutation_p.G445V|PUM2_uc010yjz.1_Missense_Mutation_p.G384V	NM_015317	NP_056132	Q8TB72	PUM2_HUMAN	pumilio homolog 2	445	Ala-rich.				regulation of translation	perinuclear region of cytoplasm|stress granule	protein binding|RNA binding			ovary(1)	1	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)					CACTAAGGCACCAGTCTGATC	0.418			NA											24	60					1.75199e-13	2.27043e-13	0.007291	1	0
APOB	338	broad.mit.edu	37	2	21250797	21250797	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:21250797C>A	uc002red.2	-	14	2098	c.1970G>T	c.(1969-1971)GGG>GTG	p.G657V		NM_000384	NP_000375	P04114	APOB_HUMAN	apolipoprotein B precursor	657	Vitellogenin.				cholesterol homeostasis|cholesterol metabolic process|leukocyte migration|low-density lipoprotein particle clearance|low-density lipoprotein particle remodeling|platelet activation|positive regulation of cholesterol storage|positive regulation of macrophage derived foam cell differentiation|receptor-mediated endocytosis|response to virus	chylomicron remnant|clathrin-coated endocytic vesicle membrane|endoplasmic reticulum lumen|endoplasmic reticulum membrane|endosome lumen|endosome membrane|intermediate-density lipoprotein particle|low-density lipoprotein particle|mature chylomicron|microsome|plasma membrane|very-low-density lipoprotein particle	cholesterol transporter activity|enzyme binding|heparin binding|low-density lipoprotein particle receptor binding|phospholipid binding|protein heterodimerization activity			ovary(11)|skin(9)|central_nervous_system(3)|large_intestine(2)|upper_aerodigestive_tract(1)|pancreas(1)	27	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)				Atorvastatin(DB01076)	TATAAGATTCCCTTCTATTTT	0.413			NA											12	110					0.00185496	0.00194694	0.001855	1	0
LHCGR	3973	broad.mit.edu	37	2	48950765	48950765	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:48950765T>C	uc002rwu.3	-	5	524	c.454A>G	c.(454-456)ATT>GTT	p.I152V	GTF2A1L_uc002rwt.2_Intron|LHCGR_uc002rwv.2_RNA	NM_000233	NP_000224	P22888	LSHR_HUMAN	luteinizing hormone/choriogonadotropin receptor	152	Extracellular (Potential).|LRR 3.		I -> T (in LHR; reveals a marked impairment of human chorionic gonadotropin binding and signal transduction).		male genitalia development|male gonad development	endosome|integral to plasma membrane	luteinizing hormone receptor activity			ovary(3)|lung(2)|breast(2)|skin(1)	8		all_hematologic(82;0.151)|Acute lymphoblastic leukemia(82;0.176)	Lung(47;0.101)|LUSC - Lung squamous cell carcinoma(58;0.151)		Cetrorelix(DB00050)|Choriogonadotropin alfa(DB00097)|Goserelin(DB00014)|Lutropin alfa(DB00044)|Menotropins(DB00032)	ACTTACAGAATGAAATTTGAT	0.383			NA							Familial_Male-Limited_Precocious_Puberty				28	81					0	0	0.009535	0	0
EXOC6B	23233	broad.mit.edu	37	2	72562091	72562091	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:72562091G>T	uc010fep.2	-	20	2319	c.2181C>A	c.(2179-2181)TTC>TTA	p.F727L		NM_015189	NP_056004	Q9Y2D4	EXC6B_HUMAN	SEC15-like 2	727					protein transport|vesicle docking involved in exocytosis	exocyst				central_nervous_system(2)	2						TCAAGTCGATGAAGGCCAACT	0.458			NA											27	78					2.14196e-07	2.48428e-07	0.007291	1	0
SFXN5	94097	broad.mit.edu	37	2	73172187	73172187	+	Silent	SNP	C	C	A	rs147845998		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:73172187C>A	uc002siq.2	-	14	1118	c.987G>T	c.(985-987)ACG>ACT	p.T329T	SFXN5_uc002sio.2_Silent_p.T221T|SFXN5_uc010yrc.1_Silent_p.T178T|SFXN5_uc002sip.2_RNA|SFXN5_uc010fet.2_3'UTR|SFXN5_uc010fer.2_RNA|SFXN5_uc010feq.2_Silent_p.T111T|SFXN5_uc010fes.2_3'UTR	NM_144579	NP_653180	Q8TD22	SFXN5_HUMAN	sideroflexin 5	329					iron ion homeostasis	integral to membrane	cation transmembrane transporter activity			ovary(1)	1						TCCGGCTGCTCGTGGCCTGGG	0.602			NA											8	22					3.09899e-07	3.54569e-07	0.004482	1	0
SLC9A2	6549	broad.mit.edu	37	2	103317539	103317539	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:103317539T>C	uc002tca.2	+	8	1739	c.1597T>C	c.(1597-1599)TTT>CTT	p.F533L		NM_003048	NP_003039	Q9UBY0	SL9A2_HUMAN	solute carrier family 9 (sodium/hydrogen	533	Cytoplasmic (Potential).					integral to membrane|plasma membrane	sodium:hydrogen antiporter activity			central_nervous_system(3)|skin(3)|breast(2)	8						GTTTAAGAAGTTTGATGATAA	0.294			NA											9	47					0	0	0.004482	0	0
ST6GAL2	84620	broad.mit.edu	37	2	107460224	107460224	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:107460224C>A	uc002tdq.2	-	2	329	c.210G>T	c.(208-210)CCG>CCT	p.P70P	ST6GAL2_uc002tdr.2_Silent_p.P70P|ST6GAL2_uc002tds.3_Silent_p.P70P	NM_001142351	NP_001135823	Q96JF0	SIAT2_HUMAN	ST6 beta-galactosamide	70	Lumenal (Potential).				growth|multicellular organismal development|oligosaccharide metabolic process|protein glycosylation	Golgi cisterna membrane|integral to Golgi membrane	beta-galactoside alpha-2,6-sialyltransferase activity			pancreas(6)|ovary(4)|skin(1)	11						GGCCCCCAGGCGGGGAGGGCT	0.706			NA											16	34					1.52009e-12	1.94022e-12	0.003163	1	0
SULT1C3	442038	broad.mit.edu	37	2	108863744	108863744	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:108863744T>C	uc010ywo.1	+	1	94	c.94T>C	c.(94-96)TCA>CCA	p.S32P		NM_001008743	NP_001008743	Q6IMI6	ST1C3_HUMAN	sulfotransferase family, cytosolic, 1C, member	32						cytoplasm	alcohol sulfotransferase activity			skin(1)	1						GTTGATATTATCAAAAGAATG	0.393			NA											31	108					0	0	0.009535	0	0
EDAR	10913	broad.mit.edu	37	2	109547447	109547447	+	Silent	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:109547447C>G	uc002teq.3	-	2	455	c.24G>C	c.(22-24)ACG>ACC	p.T8T	EDAR_uc010fjn.2_Silent_p.T8T|EDAR_uc010yws.1_Silent_p.T8T	NM_022336	NP_071731	Q9UNE0	EDAR_HUMAN	ectodysplasin A receptor precursor	8					apoptosis|cell differentiation	integral to membrane	protein binding|transmembrane receptor activity			skin(1)	1						AGGGCGTCTGCGTGCAGTCCC	0.582			NA											30	92					0	0	0.010818	0	0
DDX11L2	84771	broad.mit.edu	37	2	114357557	114357557	+	Nonstop_Mutation	SNP	A	A	G	rs115341812	by1000genomes	TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:114357557A>G	uc010yxx.1	-	3	709	c.382T>C	c.(382-384)TAG>CAG	p.*128Q						SubName: Full=DEAD/H box polypeptide 11 like 2;												0						GCCTACTTCTAGTGAAACTGG	0.567			NA											2	12					0	0	0.004672	0	0
CCDC148	130940	broad.mit.edu	37	2	159170350	159170350	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:159170350T>C	uc002tzq.2	-	8	1084	c.821A>G	c.(820-822)TAC>TGC	p.Y274C	CCDC148_uc002tzr.2_Missense_Mutation_p.Y122C|CCDC148_uc010foh.2_5'UTR|CCDC148_uc010foi.1_Missense_Mutation_p.Y221C|CCDC148_uc010foj.1_Missense_Mutation_p.Y122C|CCDC148_uc010fok.1_Missense_Mutation_p.Y188C	NM_138803	NP_620158	Q8NFR7	CC148_HUMAN	coiled-coil domain containing 148	274										ovary(2)	2						ATCTCCAGGGTACTGATCCAA	0.393			NA											24	52					0	0	0.003954	0	0
BAZ2B	29994	broad.mit.edu	37	2	160189181	160189181	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:160189181C>T	uc002uao.2	-	34	6165	c.5813G>A	c.(5812-5814)CGA>CAA	p.R1938Q	BAZ2B_uc002uap.2_Missense_Mutation_p.R1902Q	NM_013450	NP_038478	Q9UIF8	BAZ2B_HUMAN	bromodomain adjacent to zinc finger domain, 2B	1938	PHD-type.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|protein binding|zinc ion binding			ovary(3)|skin(1)	4						ATCTCCCTTTCGACAGATTTG	0.368			NA											23	66					0	0	0.003954	0	0
TTN	7273	broad.mit.edu	37	2	179451529	179451529	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:179451529G>T	uc010zfg.1	-	257	56619	c.56395C>A	c.(56395-56397)CCG>ACG	p.P18799T	uc002umo.2_Intron|uc002ump.1_Intron|TTN_uc010zfh.1_Missense_Mutation_p.P12494T|TTN_uc010zfi.1_Missense_Mutation_p.P12427T|TTN_uc010zfj.1_Missense_Mutation_p.P12302T	NM_133378	NP_596869	Q8WZ42	TITIN_HUMAN	titin isoform N2-A	19726							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			ovary(58)|stomach(19)|large_intestine(17)|lung(16)|skin(16)|breast(10)|pancreas(7)|kidney(4)|central_nervous_system(3)|urinary_tract(2)|upper_aerodigestive_tract(1)	153			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			GGGGGATCCGGCTCACCTAGA	0.413			NA											24	83					4.4004e-07	5.01212e-07	0.00333	1	0
SAG	6295	broad.mit.edu	37	2	234238223	234238223	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:234238223G>T	uc002vuh.2	+	9	1121	c.733G>T	c.(733-735)GTG>TTG	p.V245L	SAG_uc010zmq.1_Missense_Mutation_p.V111L	NM_000541	NP_000532	P10523	ARRS_HUMAN	S-arrestin	245					rhodopsin mediated phototransduction|rhodopsin mediated signaling pathway		protein phosphatase inhibitor activity			ovary(1)	1		Breast(86;0.0013)|Renal(207;0.00339)|all_hematologic(139;0.0116)|all_lung(227;0.018)|Acute lymphoblastic leukemia(138;0.0327)|Lung NSC(271;0.054)		Epithelial(121;2.86e-17)|BRCA - Breast invasive adenocarcinoma(100;0.00037)|LUSC - Lung squamous cell carcinoma(224;0.00608)|Lung(119;0.00714)|GBM - Glioblastoma multiforme(43;0.207)		TAAAGCATTCGGTAGGACCTT	0.468			NA											16	19					6.31663e-08	7.46243e-08	0.003163	1	0
UGT1A9	54600	broad.mit.edu	37	2	234580839	234580839	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:234580839G>C	uc002vus.2	+	1	296	c.259G>C	c.(259-261)GAC>CAC	p.D87H	UGT1A8_uc010zmv.1_Intron|UGT1A8_uc002vup.2_Intron|UGT1A10_uc002vuq.3_Intron|UGT1A10_uc002vur.2_Intron|UGT1A9_uc010zmw.1_Missense_Mutation_p.D87H	NM_021027	NP_066307	O60656	UD19_HUMAN	UDP glycosyltransferase 1 family, polypeptide A9	87					drug metabolic process|flavone metabolic process|negative regulation of fatty acid metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|integral to membrane|microsome	enzyme binding|enzyme inhibitor activity|glucuronosyltransferase activity|protein heterodimerization activity|protein homodimerization activity|retinoic acid binding			ovary(3)|breast(1)|skin(1)	5		Breast(86;0.000766)|all_lung(227;0.00269)|Renal(207;0.00339)|all_hematologic(139;0.0116)|Acute lymphoblastic leukemia(138;0.0331)|Lung NSC(271;0.0459)|Lung SC(224;0.128)		Epithelial(121;1.26e-17)|BRCA - Breast invasive adenocarcinoma(100;0.000436)|Lung(119;0.00347)|LUSC - Lung squamous cell carcinoma(224;0.00757)	Entacapone(DB00494)|Etodolac(DB00749)|Indomethacin(DB00328)|Irinotecan(DB00762)|Mycophenolic acid(DB01024)|Oxyphenonium(DB00219)|Propofol(DB00818)|Sorafenib(DB00398)	GGAGGATCTGGACCGGGAGTT	0.418			NA											40	55					0	0	0.00623	0	0
HJURP	55355	broad.mit.edu	37	2	234750291	234750291	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr2:234750291C>T	uc002vvg.2	-	8	1201	c.1135G>A	c.(1135-1137)GTG>ATG	p.V379M	HJURP_uc010znd.1_Missense_Mutation_p.V318M|HJURP_uc010zne.1_Missense_Mutation_p.V287M	NM_018410	NP_060880	Q8NCD3	HJURP_HUMAN	Holliday junction recognition protein	379					cell cycle|CenH3-containing nucleosome assembly at centromere|centromeric core chromatin assembly|chromosome segregation|regulation of DNA binding|regulation of protein complex assembly	condensed chromosome kinetochore|cytoplasm|nucleolus|nucleoplasm	DNA binding|histone binding			ovary(1)	1		Breast(86;0.00204)|all_lung(227;0.00433)|Renal(207;0.00685)|all_hematologic(139;0.0116)|Acute lymphoblastic leukemia(138;0.0326)|Lung NSC(271;0.0719)|Lung SC(224;0.128)		Epithelial(121;2.01e-18)|BRCA - Breast invasive adenocarcinoma(100;0.000186)|Lung(119;0.00521)|LUSC - Lung squamous cell carcinoma(224;0.00829)		GAGGGTGTCACTTTGCGCTCC	0.368			NA											26	62					0	0	0.003954	0	0
BTBD3	22903	broad.mit.edu	37	20	11900381	11900381	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr20:11900381G>T	uc002wnz.2	+	3	792	c.433G>T	c.(433-435)GGG>TGG	p.G145W	BTBD3_uc002wny.2_Missense_Mutation_p.G84W|BTBD3_uc002woa.2_Missense_Mutation_p.G84W|BTBD3_uc010zrf.1_5'UTR|BTBD3_uc010zrg.1_5'UTR|BTBD3_uc010zrh.1_5'UTR	NM_014962	NP_055777	Q9Y2F9	BTBD3_HUMAN	BTB/POZ domain containing protein 3 isoform a	145	BTB.									ovary(2)|central_nervous_system(1)	3						TTTAGCTGTTGGGAGCTCTGT	0.408			NA											29	79					1.75199e-13	2.27043e-13	0.007291	1	0
DSTN	11034	broad.mit.edu	37	20	17581671	17581671	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr20:17581671G>C	uc002wpr.2	+	2	547	c.292G>C	c.(292-294)GAG>CAG	p.E98Q	DSTN_uc002wpq.2_Missense_Mutation_p.E81Q|DSTN_uc010gck.2_Missense_Mutation_p.E81Q	NM_006870	NP_006861	P60981	DEST_HUMAN	destrin isoform a	98	ADF-H.				actin filament severing|actin polymerization or depolymerization		actin binding			large_intestine(1)|skin(1)	2						CAGAAAAGAAGAGTTGATGTT	0.368			NA											17	78					0	0	0.00499	0	0
C20orf79	140856	broad.mit.edu	37	20	18794596	18794596	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr20:18794596C>A	uc002wrk.2	+	1	227	c.137C>A	c.(136-138)CCA>CAA	p.P46Q	uc002wrj.1_Intron	NM_178483	NP_848578	Q9UJQ7	CT079_HUMAN	hypothetical protein LOC140856	46	SCP2.						sterol binding			skin(3)	3						GAGAGCTTCCCAGTGTTTCAG	0.507			NA											23	38					2.89027e-11	3.61639e-11	0.014323	1	0
CDH22	64405	broad.mit.edu	37	20	44839089	44839089	+	Silent	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr20:44839089C>G	uc002xrm.2	-	6	1544	c.1143G>C	c.(1141-1143)GTG>GTC	p.V381V	CDH22_uc010ghk.1_Silent_p.V381V|CDH22_uc002xrn.1_Silent_p.V132V	NM_021248	NP_067071	Q9UJ99	CAD22_HUMAN	cadherin 22 precursor	381	Extracellular (Potential).|Cadherin 3.				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(4)|skin(1)	5		Myeloproliferative disorder(115;0.0122)				CGGCCACGCGCACGATCGCCT	0.716			NA											3	14					0	0	0.004672	0	0
ZNF217	7764	broad.mit.edu	37	20	52199100	52199100	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr20:52199100C>A	uc002xwq.3	-	1	537	c.266G>T	c.(265-267)CGG>CTG	p.R89L	ZNF217_uc010gij.1_Missense_Mutation_p.R81L	NM_006526	NP_006517	O75362	ZN217_HUMAN	zinc finger protein 217	89					negative regulation of transcription, DNA-dependent	histone deacetylase complex	protein binding|sequence-specific DNA binding transcription factor activity|transcription regulatory region DNA binding|zinc ion binding			skin(2)|ovary(1)|large_intestine(1)|lung(1)|breast(1)	6	all_cancers(1;6.75e-17)|all_epithelial(1;1.76e-18)|Breast(2;3.83e-14)|Lung NSC(4;9.04e-07)|all_lung(4;2.5e-06)|Ovarian(1;0.0398)		BRCA - Breast invasive adenocarcinoma(1;9.88e-17)|Epithelial(1;1.56e-14)|all cancers(1;9.44e-13)|STAD - Stomach adenocarcinoma(23;0.0474)|Colorectal(105;0.198)			GAGGGTAGGCCGGTGTTGCAT	0.463			NA											40	127					4.32679e-17	5.84577e-17	0.006999	1	0
OGFR	11054	broad.mit.edu	37	20	61444194	61444194	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr20:61444194G>A	uc002ydj.2	+	7	1262	c.1227G>A	c.(1225-1227)AAG>AAA	p.K409K	OGFR_uc002ydk.2_Silent_p.K392K|OGFR_uc002ydl.2_Silent_p.K357K|uc011aam.1_3'UTR	NM_007346	NP_031372	Q9NZT2	OGFR_HUMAN	opioid growth factor receptor	409					regulation of cell growth	cytoplasm|membrane|nucleus	opioid receptor activity				0	Breast(26;3.65e-08)					AGGTGGAGAAGATCGCTCTGA	0.652			NA											11	40					0	0	0.010729	0	0
PDE9A	5152	broad.mit.edu	37	21	44182290	44182290	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr21:44182290G>A	uc002zbm.2	+	14	1246	c.1183G>A	c.(1183-1185)GAG>AAG	p.E395K	PDE9A_uc002zbn.2_Missense_Mutation_p.E268K|PDE9A_uc002zbo.2_Missense_Mutation_p.E342K|PDE9A_uc002zbp.2_Missense_Mutation_p.E188K|PDE9A_uc002zbq.2_Missense_Mutation_p.E293K|PDE9A_uc002zbs.2_Missense_Mutation_p.E188K|PDE9A_uc002zbr.2_Missense_Mutation_p.E188K|PDE9A_uc002zbt.2_Missense_Mutation_p.E267K|PDE9A_uc002zbu.2_Missense_Mutation_p.E261K|PDE9A_uc002zbv.2_Missense_Mutation_p.E235K|PDE9A_uc002zbw.2_Missense_Mutation_p.E178K|PDE9A_uc002zbx.2_Missense_Mutation_p.E335K|PDE9A_uc002zby.2_Missense_Mutation_p.E178K|PDE9A_uc002zbz.2_Missense_Mutation_p.E287K|PDE9A_uc002zca.2_Missense_Mutation_p.E354K|PDE9A_uc002zcb.2_Missense_Mutation_p.E369K|PDE9A_uc002zcc.2_Missense_Mutation_p.E294K|PDE9A_uc002zcd.2_Missense_Mutation_p.E309K|PDE9A_uc002zce.2_Missense_Mutation_p.E328K|PDE9A_uc002zcf.2_Missense_Mutation_p.E188K|PDE9A_uc002zcg.2_Missense_Mutation_p.E188K|PDE9A_uc002zch.2_Missense_Mutation_p.E178K|PDE9A_uc010gpf.1_Missense_Mutation_p.E188K	NM_002606	NP_002597	O76083	PDE9A_HUMAN	phosphodiesterase 9A isoform a	395	Catalytic (By similarity).				platelet activation|signal transduction	cytosol|endoplasmic reticulum|Golgi apparatus|perinuclear region of cytoplasm|ruffle membrane	3',5'-cyclic-GMP phosphodiesterase activity|metal ion binding|protein binding			ovary(1)|skin(1)	2						GATCCTCGCCGAGCCTGAGTG	0.612			NA											18	89					0	0	0.00499	0	0
COL6A2	1292	broad.mit.edu	37	21	47546443	47546443	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr21:47546443C>T	uc002zia.1	+	27	2531	c.2449C>T	c.(2449-2451)CCC>TCC	p.P817S	COL6A2_uc002zhy.1_Missense_Mutation_p.P817S|COL6A2_uc002zhz.1_Missense_Mutation_p.P817S|COL6A2_uc002zib.1_Missense_Mutation_p.P223S|COL6A2_uc002zic.1_5'UTR	NM_001849	NP_001840	P12110	CO6A2_HUMAN	alpha 2 type VI collagen isoform 2C2 precursor	817	Nonhelical region.				axon guidance|cell-cell adhesion|extracellular matrix organization|protein heterotrimerization	collagen|extracellular space|protein complex	extracellular matrix structural constituent|protein binding, bridging			central_nervous_system(7)|ovary(1)	8	Breast(49;0.245)			Colorectal(79;0.0303)|READ - Rectum adenocarcinoma(84;0.0649)		CCCAGACCTTCCCTGCCAAAC	0.652			NA											91	71					0	0	0.01441	0	0
MCM3AP	8888	broad.mit.edu	37	21	47671503	47671503	+	Silent	SNP	C	C	T	rs149634851	by1000genomes	TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr21:47671503C>T	uc002zir.1	-	20	4266	c.4230G>A	c.(4228-4230)TCG>TCA	p.S1410S	MCM3APAS_uc002zim.2_RNA|MCM3APAS_uc002zin.2_3'UTR|MCM3AP_uc002zip.1_Silent_p.S151S|MCM3AP_uc002ziq.1_Silent_p.S337S|MCM3APAS_uc002zis.1_RNA	NM_003906	NP_003897	O60318	MCM3A_HUMAN	minichromosome maintenance complex component 3	1410					DNA replication|protein import into nucleus	cytosol|nucleus	DNA binding|nucleotide binding			large_intestine(2)|lung(1)|ovary(1)|skin(1)	5	Breast(49;0.112)					AGTTGAAAAGCGAAAGCGTCT	0.398			NA											4	102					0	0	0.009096	0	0
PCNT	5116	broad.mit.edu	37	21	47769710	47769710	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr21:47769710G>C	uc002zji.3	+	8	1427	c.1320G>C	c.(1318-1320)GAG>GAC	p.E440D	PCNT_uc002zjj.2_Missense_Mutation_p.E322D|PCNT_uc010gqk.1_RNA	NM_006031	NP_006022	O95613	PCNT_HUMAN	pericentrin	440	Glu-rich.|Potential.				cilium assembly|G2/M transition of mitotic cell cycle	cytosol|microtubule	calmodulin binding			ovary(4)|breast(2)|pancreas(2)	8	Breast(49;0.112)					AGTTCAAAGAGAGCGAGAAAG	0.443			NA											18	132					0	0	0.00499	0	0
MPPED1	758	broad.mit.edu	37	22	43898607	43898607	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr22:43898607C>T	uc011apv.1	+	6	1055	c.832C>T	c.(832-834)CGG>TGG	p.R278W	MPPED1_uc011apw.1_Missense_Mutation_p.R172W|MPPED1_uc011apx.1_Missense_Mutation_p.R120W|MPPED1_uc011apy.1_Missense_Mutation_p.R278W|MPPED1_uc011apz.1_Missense_Mutation_p.R311W	NM_001044370	NP_001037835	O15442	MPPD1_HUMAN	metallophosphoesterase domain containing 1	278							hydrolase activity				0		all_neural(38;0.0244)|Ovarian(80;0.0694)				CGTCCAGCCGCGGTTACATGT	0.627			NA											34	73					0	0	0.005524	0	0
C22orf9	23313	broad.mit.edu	37	22	45599789	45599789	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr22:45599789G>A	uc003bfx.1	-	6	660	c.594C>T	c.(592-594)TTC>TTT	p.F198F	C22orf9_uc010gzw.1_Silent_p.F50F|C22orf9_uc003bfv.1_Silent_p.F207F|C22orf9_uc003bfw.1_Silent_p.F203F|C22orf9_uc010gzx.2_Silent_p.F180F|MIR1249_hsa-mir-1249|MI0006384_5'Flank	NM_001009880	NP_001009880	Q6ICG6	K0930_HUMAN	hypothetical protein LOC23313 isoform b	198							protein binding				0		Ovarian(80;0.00965)|all_neural(38;0.0244)		UCEC - Uterine corpus endometrioid carcinoma (28;0.0178)|READ - Rectum adenocarcinoma(1;0.000617)|Colorectal(1;0.0024)		TGACCCCCTGGAACGTGTTGG	0.587			NA											16	41					0	0	0.004007	0	0
PLXNB2	23654	broad.mit.edu	37	22	50721182	50721182	+	Missense_Mutation	SNP	T	T	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr22:50721182T>G	uc003bkv.3	-	18	3051	c.2945A>C	c.(2944-2946)AAC>ACC	p.N982T	PLXNB2_uc003bkt.1_5'Flank|PLXNB2_uc003bku.1_5'Flank	NM_012401	NP_036533	O15031	PLXB2_HUMAN	plexin B2 precursor	982	Extracellular (Potential).				regulation of small GTPase mediated signal transduction	integral to membrane|intracellular	GTPase activator activity|protein binding|receptor activity			ovary(4)|central_nervous_system(1)|skin(1)	6		all_cancers(38;5.78e-13)|all_epithelial(38;1.71e-11)|all_lung(38;3.89e-05)|Breast(42;0.000523)|Lung NSC(38;0.000992)|Ovarian(80;0.0221)|Hepatocellular(38;0.0691)|Lung SC(80;0.113)		BRCA - Breast invasive adenocarcinoma(115;0.205)|LUAD - Lung adenocarcinoma(64;0.247)		CAGTACGGGGTTTTCGCGGTA	0.677			NA											5	14					0	0	0.00308	0	0
SCO2	9997	broad.mit.edu	37	22	50962824	50962824	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr22:50962824C>G	uc003bma.2	-	2	193	c.17G>C	c.(16-18)CGG>CCG	p.R6P	SCO2_uc003blz.3_Missense_Mutation_p.R6P	NM_005138	NP_005129	O43819	SCO2_HUMAN	cytochrome oxidase deficient homolog 2	6					cell redox homeostasis|cellular copper ion homeostasis|copper ion transport|oxidation-reduction process|respiratory chain complex IV assembly	mitochondrial inner membrane	copper ion binding				0		all_cancers(38;4.58e-14)|all_epithelial(38;1.12e-12)|all_lung(38;3.07e-05)|Breast(42;6.27e-05)|Lung NSC(38;0.000813)|Ovarian(80;0.0221)|Hepatocellular(38;0.0691)|Lung SC(80;0.113)		BRCA - Breast invasive adenocarcinoma(115;0.205)|LUAD - Lung adenocarcinoma(64;0.247)		TGTGGGGCTCCGAGTCAGCAG	0.637			NA											3	42					0	0	0.004672	0	0
CNTN4	152330	broad.mit.edu	37	3	2944582	2944582	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:2944582G>T	uc003bpc.2	+	11	1321	c.1100G>T	c.(1099-1101)GGA>GTA	p.G367V	CNTN4_uc003bpb.1_Missense_Mutation_p.G39V|CNTN4_uc003bpd.1_Missense_Mutation_p.G367V|CNTN4_uc003bpe.2_Missense_Mutation_p.G39V|CNTN4_uc003bpf.2_Missense_Mutation_p.G39V	NM_175607	NP_783200	Q8IWV2	CNTN4_HUMAN	contactin 4 isoform a precursor	367	Ig-like C2-type 4.				axon guidance|axonal fasciculation|brain development|negative regulation of neuron differentiation|neuron cell-cell adhesion|regulation of synaptic plasticity	anchored to membrane|axon|extracellular region|plasma membrane	protein binding			large_intestine(2)|ovary(2)|lung(1)|central_nervous_system(1)|pancreas(1)	7		Ovarian(110;0.156)		Epithelial(13;0.000695)|all cancers(10;0.0047)|OV - Ovarian serous cystadenocarcinoma(96;0.01)		ATTGAGCAAGGAACACTCAAC	0.363			NA											6	15					0.00116845	0.00123147	0.001168	1	0
VGLL4	9686	broad.mit.edu	37	3	11600212	11600212	+	Missense_Mutation	SNP	C	C	G	rs147755206		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:11600212C>G	uc003bwf.2	-	6	1057	c.691G>C	c.(691-693)GTG>CTG	p.V231L	VGLL4_uc010hdx.1_Missense_Mutation_p.V237L|VGLL4_uc003bwg.2_Missense_Mutation_p.V236L|VGLL4_uc010hdv.1_Missense_Mutation_p.V147L|VGLL4_uc010hdw.1_Missense_Mutation_p.V151L|VGLL4_uc011aun.1_Missense_Mutation_p.V172L	NM_014667	NP_055482	Q14135	VGLL4_HUMAN	vestigial like 4 isoform b	231					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus				ovary(1)	1				LUSC - Lung squamous cell carcinoma(1;0.089)|Lung(1;0.111)		GTGATGGACACGGAGTTGGGT	0.597			NA											42	63					0	0	0.010771	0	0
CAMKV	79012	broad.mit.edu	37	3	49897103	49897103	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:49897103C>T	uc003cxt.1	-	11	1347	c.1154G>A	c.(1153-1155)AGT>AAT	p.S385N	CAMKV_uc011bcy.1_Missense_Mutation_p.S310N|CAMKV_uc003cxv.1_Missense_Mutation_p.S357N|CAMKV_uc003cxw.1_Missense_Mutation_p.S217N|CAMKV_uc003cxx.1_Missense_Mutation_p.S217N|CAMKV_uc003cxu.2_Missense_Mutation_p.S354N|CAMKV_uc011bcz.1_Missense_Mutation_p.S317N|CAMKV_uc011bda.1_Missense_Mutation_p.S311N	NM_024046	NP_076951	Q8NCB2	CAMKV_HUMAN	CaM kinase-like vesicle-associated	385	Ala-rich.					cytoplasmic vesicle membrane|plasma membrane	ATP binding|protein serine/threonine kinase activity			ovary(2)|lung(2)|large_intestine(2)|central_nervous_system(1)	7				BRCA - Breast invasive adenocarcinoma(193;4.62e-05)|KIRC - Kidney renal clear cell carcinoma(197;0.00551)|Kidney(197;0.00621)		TGGGGTGGCACTACGGTCTGC	0.627			NA											39	62					0	0	0.00623	0	0
CLDND1	56650	broad.mit.edu	37	3	98235667	98235667	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:98235667G>C	uc003dsp.2	-	5	1478	c.598C>G	c.(598-600)CAG>GAG	p.Q200E	CLDND1_uc003dso.2_Intron|CLDND1_uc003dsq.2_Missense_Mutation_p.Q200E|CLDND1_uc003dss.2_Missense_Mutation_p.Q200E|CLDND1_uc003dsr.2_Missense_Mutation_p.Q105E|CLDND1_uc003dst.2_Missense_Mutation_p.Q223E|CLDND1_uc003dsu.2_Missense_Mutation_p.Q200E|CLDND1_uc003dsv.2_Missense_Mutation_p.Q200E	NM_019895	NP_063948	Q9NY35	CLDN1_HUMAN	claudin domain containing 1 protein isoform a	200						integral to membrane				ovary(1)	1						TCTAGTTTCTGGTGGAGTAGT	0.448			NA											17	35					0	0	0.006122	0	0
CD200R1	131450	broad.mit.edu	37	3	112643993	112643994	+	Missense_Mutation	DNP	GG	GG	TT			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	GG	GG	-	-	GG	GG	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:112643993_112643994GG>TT	uc003dzk.1	-	5	980_981	c.747_748CC>AA	c.(745-750)ATCCTT>ATAATT	p.L250I	CD200R1_uc003dzj.1_Missense_Mutation_p.L273I|CD200R1_uc011bhx.1_Intron	NM_170780	NP_740750	Q8TD46	MO2R1_HUMAN	CD200 receptor 1 isoform d	250	Helical; (Potential).				interspecies interaction between organisms|regulation of immune response	extracellular region|integral to membrane|plasma membrane	receptor activity			ovary(2)|pancreas(1)	3						ATAATAGTAAGGATGATATATG	0.267			NA											10	38					0	0	0.004672	0	0
MYLK	4638	broad.mit.edu	37	3	123452802	123452802	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:123452802C>T	uc003ego.2	-	10	1323	c.1041G>A	c.(1039-1041)CTG>CTA	p.L347L	MYLK_uc011bjw.1_Silent_p.L347L|MYLK_uc003egp.2_Silent_p.L347L|MYLK_uc003egq.2_Silent_p.L347L|MYLK_uc003egr.2_Silent_p.L347L|MYLK_uc003egs.2_Silent_p.L171L	NM_053025	NP_444253	Q15746	MYLK_HUMAN	myosin light chain kinase isoform 1	347					aorta smooth muscle tissue morphogenesis|muscle contraction	cytosol	actin binding|ATP binding|calmodulin binding|metal ion binding|myosin light chain kinase activity			ovary(6)|skin(2)|stomach(1)	9		Lung NSC(201;0.0496)		GBM - Glioblastoma multiforme(114;0.0736)		TTGCGGCCTGCAGGGTGATGG	0.632			NA											36	111					0	0	0.01441	0	0
PCOLCE2	26577	broad.mit.edu	37	3	142542444	142542444	+	Silent	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:142542444G>A	uc003evd.2	-	7	1075	c.879C>T	c.(877-879)ACC>ACT	p.T293T		NM_013363	NP_037495	Q9UKZ9	PCOC2_HUMAN	procollagen C-endopeptidase enhancer 2	293						extracellular region	collagen binding|heparin binding|peptidase activator activity			ovary(2)|skin(1)	3						ACAAGGCCACGGTGGGTTTTA	0.363			NA											24	56					0	0	0.00333	0	0
SI	6476	broad.mit.edu	37	3	164766974	164766975	+	Missense_Mutation	DNP	CC	CC	AG			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	CC	CC	-	-	CC	CC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:164766974_164766975CC>AG	uc003fei.2	-	15	1717_1718	c.1655_1656GG>CT	c.(1654-1656)TGG>TCT	p.W552S		NM_001041	NP_001032	P14410	SUIS_HUMAN	sucrase-isomaltase	552	Lumenal.|Isomaltase.				carbohydrate metabolic process|polysaccharide digestion	apical plasma membrane|brush border|Golgi apparatus|integral to membrane	carbohydrate binding|oligo-1,6-glucosidase activity|sucrose alpha-glucosidase activity			ovary(7)|upper_aerodigestive_tract(4)|skin(2)|pancreas(1)	14		Prostate(884;0.00314)|Melanoma(1037;0.0153)|all_neural(597;0.0199)			Acarbose(DB00284)	ACTGTTTACCCCAGTTCTGCAC	0.337			NA								HNSCC(35;0.089)			14	55					0	0	0.004672	0	0
YEATS2	55689	broad.mit.edu	37	3	183521783	183521783	+	Missense_Mutation	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr3:183521783A>T	uc003fly.2	+	27	3786	c.3591A>T	c.(3589-3591)AGA>AGT	p.R1197S	uc003fma.1_3'UTR	NM_018023	NP_060493	Q9ULM3	YETS2_HUMAN	YEATS domain containing 2	1197					histone H3 acetylation|negative regulation of transcription from RNA polymerase II promoter	Ada2/Gcn5/Ada3 transcription activator complex	TBP-class protein binding			ovary(3)|large_intestine(1)	4	all_cancers(143;6.55e-10)|Ovarian(172;0.0303)		all cancers(12;2.38e-42)|Epithelial(37;1.9e-36)|OV - Ovarian serous cystadenocarcinoma(80;6.48e-22)			AGTGGCAAAGAGCAATGACAA	0.403			NA											29	63					0	0	0.008361	0	0
JAKMIP1	152789	broad.mit.edu	37	4	6107526	6107526	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr4:6107526C>A	uc003giu.3	-	3	574	c.298G>T	c.(298-300)GCG>TCG	p.A100S	JAKMIP1_uc010idb.1_Missense_Mutation_p.A100S|JAKMIP1_uc010idc.1_Intron|JAKMIP1_uc010idd.1_Missense_Mutation_p.A100S|JAKMIP1_uc011bwc.1_Intron|JAKMIP1_uc003giv.3_Missense_Mutation_p.A100S|JAKMIP1_uc010ide.2_Missense_Mutation_p.A100S	NM_144720	NP_653321	Q96N16	JKIP1_HUMAN	janus kinase and microtubule interacting protein	100	Potential.|Mediates association with microtubules.				protein transport	cytoplasm|membrane|microtubule|peripheral to membrane of membrane fraction|ribonucleoprotein complex	GABA receptor binding|RNA binding			large_intestine(1)|pancreas(1)|ovary(1)|skin(1)	4						GCGGTGCGCGCCGCCTCCTGC	0.682			NA											14	31					0.000151284	0.000160779	0.001855	1	0
LIMCH1	22998	broad.mit.edu	37	4	41694357	41694357	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr4:41694357G>A	uc003gvu.3	+	26	3236	c.3182G>A	c.(3181-3183)CGA>CAA	p.R1061Q	LIMCH1_uc003gvv.3_Missense_Mutation_p.R1035Q|LIMCH1_uc003gvw.3_Missense_Mutation_p.R1034Q|LIMCH1_uc003gvx.3_Missense_Mutation_p.R1047Q|LIMCH1_uc003gwe.3_Missense_Mutation_p.R958Q|LIMCH1_uc003gvy.3_Missense_Mutation_p.R863Q|LIMCH1_uc003gwa.3_Missense_Mutation_p.R875Q|LIMCH1_uc003gvz.3_Missense_Mutation_p.R1445Q|LIMCH1_uc011byu.1_Missense_Mutation_p.R894Q|LIMCH1_uc003gwc.3_Missense_Mutation_p.R880Q|LIMCH1_uc003gwd.3_Missense_Mutation_p.R868Q|LIMCH1_uc011byv.1_Missense_Mutation_p.R811Q|LIMCH1_uc011byw.1_Missense_Mutation_p.R334Q|LIMCH1_uc010ifv.2_5'Flank	NM_014988	NP_055803	Q9UPQ0	LIMC1_HUMAN	LIM and calponin homology domains 1 isoform a	1061	LIM zinc-binding.				actomyosin structure organization		actin binding|zinc ion binding			ovary(2)|pancreas(1)|skin(1)	4						GTTAGGATTCGAAATGGTCTC	0.428			NA											16	64					0	0	0.00499	0	0
EXOC1	55763	broad.mit.edu	37	4	56770652	56770652	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr4:56770652G>T	uc003hbe.1	+	19	2834	c.2676G>T	c.(2674-2676)CAG>CAT	p.Q892H	EXOC1_uc003hbf.1_Missense_Mutation_p.Q892H|EXOC1_uc003hbg.1_Missense_Mutation_p.Q877H	NM_018261	NP_060731	Q9NV70	EXOC1_HUMAN	exocyst complex component 1 isoform 1	892					exocytosis|protein transport	exocyst	protein binding			ovary(2)|skin(2)|lung(1)|central_nervous_system(1)	6	Glioma(25;0.08)|all_neural(26;0.101)					GCATTGCACAGTCCCACTAAA	0.388			NA											22	72					1.10513e-12	1.4177e-12	0.014323	1	0
GPRIN3	285513	broad.mit.edu	37	4	90170093	90170093	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr4:90170093G>A	uc003hsm.1	-	2	1688	c.1169C>T	c.(1168-1170)CCA>CTA	p.P390L		NM_198281	NP_938022	Q6ZVF9	GRIN3_HUMAN	G protein-regulated inducer of neurite outgrowth	390										ovary(3)	3		Hepatocellular(203;0.114)		OV - Ovarian serous cystadenocarcinoma(123;5.67e-05)		GTGCACCTGTGGCATGATGCC	0.567			NA											38	86					0	0	0.005524	0	0
SEC24D	9871	broad.mit.edu	37	4	119718857	119718857	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr4:119718857G>A	uc003ici.3	-	8	1294	c.1022C>T	c.(1021-1023)GCC>GTC	p.A341V	SEC24D_uc003icj.3_Missense_Mutation_p.A342V|SEC24D_uc003icl.2_RNA|SEC24D_uc010imz.1_RNA|SEC24D_uc011cgg.1_RNA	NM_014822	NP_055637	O94855	SC24D_HUMAN	Sec24-related protein D	341					COPII vesicle coating|intracellular protein transport|post-translational protein modification|protein N-linked glycosylation via asparagine	COPII vesicle coat|cytosol|endoplasmic reticulum membrane|Golgi membrane|perinuclear region of cytoplasm	zinc ion binding				0						AGGAATGGTGGCAAAGGGCTT	0.348			NA											27	67					0	0	0.007291	0	0
FBXW7	55294	broad.mit.edu	37	4	153332619	153332619	+	Nonsense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr4:153332619C>A	uc003ims.2	-	2	486	c.337G>T	c.(337-339)GAG>TAG	p.E113*	FBXW7_uc011cii.1_Nonsense_Mutation_p.E113*|FBXW7_uc003imt.2_Nonsense_Mutation_p.E113*|FBXW7_uc003imu.2_Nonsense_Mutation_p.E113*	NM_033632	NP_361014	Q969H0	FBXW7_HUMAN	F-box and WD repeat domain containing 7 isoform	113					interspecies interaction between organisms|lipid homeostasis|negative regulation of DNA endoreduplication|negative regulation of hepatocyte proliferation|negative regulation of Notch signaling pathway|negative regulation of triglyceride biosynthetic process|positive regulation of epidermal growth factor receptor activity|positive regulation of ERK1 and ERK2 cascade|positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process|protein stabilization|protein ubiquitination|regulation of lipid storage|regulation of protein localization|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process|sister chromatid cohesion|vasculature development	nucleolus|nucleolus|nucleoplasm|nucleoplasm|SCF ubiquitin ligase complex	protein binding|protein binding			haematopoietic_and_lymphoid_tissue(125)|large_intestine(99)|stomach(16)|lung(14)|endometrium(13)|ovary(9)|biliary_tract(8)|upper_aerodigestive_tract(5)|central_nervous_system(3)|kidney(3)|skin(3)|pancreas(3)|breast(2)|prostate(2)|cervix(1)|NS(1)|bone(1)	308	all_hematologic(180;0.093)	Acute lymphoblastic leukemia(8;0.000629)|all_hematologic(8;0.067)				tcctcctcctcatcctcctcA	0.348			NA	Mis|N|D|F		colorectal|endometrial|T-ALL								20	70					4.96729e-08	5.89576e-08	0.008871	1	0
SLC12A7	10723	broad.mit.edu	37	5	1065452	1065452	+	Missense_Mutation	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:1065452A>T	uc003jbu.2	-	18	2449	c.2383T>A	c.(2383-2385)TGG>AGG	p.W795R		NM_006598	NP_006589	Q9Y666	S12A7_HUMAN	solute carrier family 12 (potassium/chloride	795					potassium ion transport|sodium ion transport	integral to plasma membrane	potassium:chloride symporter activity			skin(2)|large_intestine(1)|ovary(1)	4	Lung NSC(6;2.47e-13)|all_lung(6;1.67e-12)|all_epithelial(6;5.44e-09)		Epithelial(17;0.000497)|OV - Ovarian serous cystadenocarcinoma(19;0.00239)|all cancers(22;0.00241)|Lung(60;0.165)		Potassium Chloride(DB00761)	GATGCGGGCCAGGCCATGAGC	0.592			NA											24	57					0	0	0.014323	0	0
DNAH5	1767	broad.mit.edu	37	5	13701495	13701495	+	Silent	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:13701495T>C	uc003jfd.2	-	77	13431	c.13389A>G	c.(13387-13389)GAA>GAG	p.E4463E	DNAH5_uc003jfc.2_Silent_p.E631E	NM_001369	NP_001360	Q8TE73	DYH5_HUMAN	dynein, axonemal, heavy chain 5	4463					microtubule-based movement	cilium axoneme|cytoplasm|microtubule	ATP binding|ATPase activity|microtubule motor activity			ovary(14)|skin(13)|upper_aerodigestive_tract(1)|central_nervous_system(1)|breast(1)|pancreas(1)	31	Lung NSC(4;0.00476)					GGCTGTTTCTTTCTATAAGTT	0.398			NA							Kartagener_syndrome				12	113					0	0	0.007413	0	0
MAP1B	4131	broad.mit.edu	37	5	71493280	71493280	+	Silent	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:71493280T>C	uc003kbw.3	+	5	4339	c.4098T>C	c.(4096-4098)AGT>AGC	p.S1366S	MAP1B_uc010iyw.1_Silent_p.S1383S|MAP1B_uc010iyx.1_Silent_p.S1240S|MAP1B_uc010iyy.1_Silent_p.S1240S	NM_005909	NP_005900	P46821	MAP1B_HUMAN	microtubule-associated protein 1B	1366						microtubule|microtubule associated complex	structural molecule activity			large_intestine(2)|ovary(1)|central_nervous_system(1)|pancreas(1)	5		Lung NSC(167;0.00202)|Ovarian(174;0.0175)|Prostate(461;0.142)|Breast(144;0.198)		OV - Ovarian serous cystadenocarcinoma(47;7.99e-54)		TTGAATTCAGTGATGCCAAAG	0.443	Melanoma(17;367 822 11631 31730 47712)		NA											21	61					0	0	0.004656	0	0
POLR3G	10622	broad.mit.edu	37	5	89783891	89783891	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:89783891G>C	uc003kjq.2	+	3	392	c.192G>C	c.(190-192)TTG>TTC	p.L64F	POLR3G_uc011cuc.1_Missense_Mutation_p.L64F	NM_006467	NP_006458	O15318	RPC7_HUMAN	polymerase (RNA) III (DNA directed) polypeptide	64					innate immune response|positive regulation of innate immune response|positive regulation of interferon-beta production|regulation of transcription from RNA polymerase III promoter|response to virus	DNA-directed RNA polymerase III complex	DNA-directed RNA polymerase activity				0		all_cancers(142;5.03e-09)|all_epithelial(76;1.23e-11)|Lung NSC(167;2.46e-05)|all_lung(232;3.25e-05)|Ovarian(174;0.00832)|Colorectal(57;0.122)|Breast(839;0.198)		OV - Ovarian serous cystadenocarcinoma(54;2.74e-31)|Epithelial(54;8.2e-26)|all cancers(79;3.86e-22)		AACAGGAGTTGAGAGAAACAA	0.338			NA											15	72					0	0	0.004007	0	0
TTC37	9652	broad.mit.edu	37	5	94860190	94860190	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:94860190C>T	uc003klb.2	-	16	1701	c.1431G>A	c.(1429-1431)AAG>AAA	p.K477K	TTC37_uc010jbf.1_Silent_p.K429K	NM_014639	NP_055454	Q6PGP7	TTC37_HUMAN	tetratricopeptide repeat domain 37	477	TPR 7.						binding			ovary(3)|pancreas(1)	4						GGGTAAGAGCCTTTGTTTTAT	0.333			NA											12	51					0	0	0.010729	0	0
CHSY3	337876	broad.mit.edu	37	5	129520888	129520888	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:129520888G>A	uc003kvd.2	+	3	2053	c.2053G>A	c.(2053-2055)GAA>AAA	p.E685K		NM_175856	NP_787052	Q70JA7	CHSS3_HUMAN	chondroitin sulfate synthase 3	685	Lumenal (Potential).					Golgi cisterna membrane|integral to membrane	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity|metal ion binding|N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity			ovary(2)|pancreas(1)	3		all_cancers(142;0.0227)|Breast(839;0.198)|Prostate(80;0.215)|Lung NSC(810;0.239)	KIRC - Kidney renal clear cell carcinoma(527;0.0186)|Kidney(363;0.0365)	OV - Ovarian serous cystadenocarcinoma(64;0.136)		CCCCAAAGCAGAAATGACCCT	0.438			NA											20	53					0	0	0.007413	0	0
NRG2	9542	broad.mit.edu	37	5	139260463	139260463	+	Silent	SNP	C	C	A	rs111392314		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:139260463C>A	uc003lex.1	-	3	1194	c.969G>T	c.(967-969)CGG>CGT	p.R323R	NRG2_uc003lev.1_Silent_p.R323R|NRG2_uc003lew.1_Silent_p.R323R|NRG2_uc003ley.1_Silent_p.R323R	NM_004883	NP_004874	O14511	NRG2_HUMAN	neuregulin 2 isoform 1	323	Ig-like C2-type.|Extracellular (Potential).				embryo development	extracellular region|integral to membrane|plasma membrane	growth factor activity	p.R323W(1)		pancreas(2)|breast(2)|ovary(1)|skin(1)	6			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			AAAGCCGGCCCCGGACGGTGT	0.637			NA											26	55					1.66031e-10	2.05716e-10	0.003954	1	0
PCDHA4	56144	broad.mit.edu	37	5	140188457	140188457	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:140188457C>T	uc003lhi.2	+	1	1786	c.1685C>T	c.(1684-1686)GCG>GTG	p.A562V	PCDHA1_uc003lha.2_Intron|PCDHA1_uc003lhb.2_Intron|PCDHA2_uc003lhd.2_Intron|PCDHA3_uc003lhf.2_Intron|PCDHA4_uc003lhh.1_Missense_Mutation_p.A562V|PCDHA4_uc011daa.1_Missense_Mutation_p.A562V	NM_018907	NP_061730	Q9UN74	PCDA4_HUMAN	protocadherin alpha 4 isoform 1 precursor	562	Cadherin 5.|Extracellular (Potential).				homophilic cell adhesion|nervous system development	integral to plasma membrane	calcium ion binding			ovary(4)|skin(2)	6			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			AACGACAACGCGCCAGCACTG	0.672			NA											27	62					0	0	0.004656	0	0
PCDHB16	57717	broad.mit.edu	37	5	140563835	140563835	+	Silent	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:140563835C>T	uc003liv.2	+	1	2856	c.1701C>T	c.(1699-1701)AAC>AAT	p.N567N		NM_020957	NP_066008	Q9NRJ7	PCDBG_HUMAN	protocadherin beta 16 precursor	567	Extracellular (Potential).				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to membrane|plasma membrane	calcium ion binding			ovary(1)|pancreas(1)	2			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			CGCTGCAGAACGGCTCCGCGC	0.711			NA											4	60					0	0	0.009096	0	0
PCDHB13	56123	broad.mit.edu	37	5	140594323	140594323	+	Missense_Mutation	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:140594323A>T	uc003lja.1	+	1	815	c.628A>T	c.(628-630)AGG>TGG	p.R210W		NM_018933	NP_061756	Q9Y5F0	PCDBD_HUMAN	protocadherin beta 13 precursor	210	Cadherin 2.|Extracellular (Potential).				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to membrane|plasma membrane	calcium ion binding			skin(2)|ovary(1)	3			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			AGCTGAGCTCAGGTTAACACT	0.547			NA											7	57					0	0	0.00308	0	0
PCDHGB6	56100	broad.mit.edu	37	5	140788211	140788211	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:140788211G>T	uc003lkj.1	+	1	442	c.442G>T	c.(442-444)GCT>TCT	p.A148S	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc003ljk.1_Intron|PCDHGA3_uc003ljm.1_Intron|PCDHGA3_uc010jfx.1_Intron|PCDHGB1_uc003ljo.1_Intron|PCDHGA4_uc003ljq.1_Intron|PCDHGB2_uc003ljs.1_Intron|PCDHGA5_uc003lju.1_Intron|PCDHGB3_uc003ljw.1_Intron|PCDHGA6_uc003ljy.1_Intron|PCDHGA7_uc003lka.1_Intron|PCDHGB4_uc003lkc.1_Intron|PCDHGA8_uc003lkd.1_Intron|PCDHGB5_uc003lkf.1_Intron|PCDHGA9_uc003lkh.1_Intron|PCDHGB6_uc003lki.1_Missense_Mutation_p.A148S	NM_018926	NP_061749	Q9Y5F9	PCDGI_HUMAN	protocadherin gamma subfamily B, 6 isoform 1	148	Extracellular (Potential).|Cadherin 2.				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			ATCTGCATCCGCTGGTACACG	0.333			NA											11	44					9.05144e-12	1.14381e-11	0.001855	1	0
PCDHGA11	56105	broad.mit.edu	37	5	140802012	140802012	+	Silent	SNP	A	A	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:140802012A>T	uc003lkq.1	+	1	1476	c.1218A>T	c.(1216-1218)ATA>ATT	p.I406I	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc003ljk.1_Intron|PCDHGA3_uc003ljm.1_Intron|PCDHGA3_uc010jfx.1_Intron|PCDHGB1_uc003ljo.1_Intron|PCDHGA4_uc003ljq.1_Intron|PCDHGB2_uc003ljs.1_Intron|PCDHGA5_uc003lju.1_Intron|PCDHGB3_uc003ljw.1_Intron|PCDHGA6_uc003ljy.1_Intron|PCDHGA7_uc003lka.1_Intron|PCDHGB4_uc003lkc.1_Intron|PCDHGA8_uc003lkd.1_Intron|PCDHGB5_uc003lkf.1_Intron|PCDHGA9_uc003lkh.1_Intron|PCDHGB6_uc003lkj.1_Intron|PCDHGA10_uc003lkl.1_Intron|PCDHGB7_uc003lkn.1_Intron|PCDHGA11_uc003lko.1_Silent_p.I406I|PCDHGA11_uc003lkp.1_Silent_p.I406I	NM_018914	NP_061737	Q9Y5H2	PCDGB_HUMAN	protocadherin gamma subfamily A, 11 isoform 1	406	Extracellular (Potential).|Cadherin 4.				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			ACAAATTGATAACAAGCAGAG	0.413			NA											11	67					0	0	0.008291	0	0
PCDHGC4	56098	broad.mit.edu	37	5	140865903	140865903	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:140865903G>A	uc003lky.1	+	1	1163	c.1163G>A	c.(1162-1164)CGC>CAC	p.R388H	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc003ljk.1_Intron|PCDHGA3_uc003ljm.1_Intron|PCDHGA3_uc010jfx.1_Intron|PCDHGB1_uc003ljo.1_Intron|PCDHGA4_uc003ljq.1_Intron|PCDHGB2_uc003ljs.1_Intron|PCDHGA5_uc003lju.1_Intron|PCDHGB3_uc003ljw.1_Intron|PCDHGA6_uc003ljy.1_Intron|PCDHGA7_uc003lka.1_Intron|PCDHGB4_uc003lkc.1_Intron|PCDHGA8_uc003lkd.1_Intron|PCDHGB5_uc003lkf.1_Intron|PCDHGA9_uc003lkh.1_Intron|PCDHGB6_uc003lkj.1_Intron|PCDHGA10_uc003lkl.1_Intron|PCDHGB7_uc003lkn.1_Intron|PCDHGA11_uc003lkp.1_Intron|PCDHGA11_uc003lkq.1_Intron|PCDHGA12_uc003lkt.1_Intron|PCDHGC3_uc003lkv.1_Intron|PCDHGC3_uc003lkw.1_Intron|PCDHGC4_uc011dbb.1_Missense_Mutation_p.R388H|PCDHGC5_uc011dbc.1_5'Flank|PCDHGC5_uc003lla.1_5'Flank	NM_018928	NP_061751	Q9Y5F7	PCDGL_HUMAN	protocadherin gamma subfamily C, 4 isoform 1	388	Cadherin 4.|Extracellular (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(4)	4			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GTGAGCCTCCGCATTCCTGAC	0.557			NA											15	46					0	0	0.003163	0	0
GLRA1	2741	broad.mit.edu	37	5	151208514	151208514	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:151208514G>T	uc003lut.2	-	8	1314	c.1027C>A	c.(1027-1029)CTC>ATC	p.L343I	GLRA1_uc003lur.2_Missense_Mutation_p.L343I|GLRA1_uc003lus.2_Missense_Mutation_p.L260I	NM_001146040	NP_001139512	P23415	GLRA1_HUMAN	glycine receptor, alpha 1 isoform 1 precursor	343	Cytoplasmic (Probable).				muscle contraction|negative regulation of transmission of nerve impulse|neuropeptide signaling pathway|positive regulation of acrosome reaction|regulation of membrane potential|startle response	cell junction|chloride channel complex|integral to plasma membrane|intracellular membrane-bounded organelle|postsynaptic membrane	extracellular-glycine-gated chloride channel activity|glycine binding|protein binding|receptor activity|taurine binding|transmitter-gated ion channel activity			ovary(1)|central_nervous_system(1)	2		all_hematologic(541;0.0341)|Medulloblastoma(196;0.0912)	Kidney(363;0.000171)|KIRC - Kidney renal clear cell carcinoma(527;0.000785)		Desflurane(DB01189)|Enflurane(DB00228)|Ethanol(DB00898)|Glycine(DB00145)|Halothane(DB01159)|Isoflurane(DB00753)|Methoxyflurane(DB01028)|Sevoflurane(DB01236)	CTGAATCGGAGCAGCTCCTTA	0.473			NA											62	147					8.81991e-31	1.25154e-30	0.01441	1	0
KIF4B	285643	broad.mit.edu	37	5	154394386	154394386	+	Missense_Mutation	SNP	A	A	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr5:154394386A>G	uc010jih.1	+	1	1127	c.967A>G	c.(967-969)ACA>GCA	p.T323A		NM_001099293	NP_001092763	Q2VIQ3	KIF4B_HUMAN	kinesin family member 4B	323	Kinesin-motor.				axon guidance|blood coagulation|microtubule-based movement	cytosol|microtubule|nuclear matrix	ATP binding|DNA binding|microtubule motor activity			ovary(1)	1	Renal(175;0.00488)	Medulloblastoma(196;0.0523)	KIRC - Kidney renal clear cell carcinoma(527;0.00112)			TCTAGAGGAAACATTAAGTAC	0.413			NA											42	209					0	0	0.010771	0	0
HIST1H3G	8355	broad.mit.edu	37	6	26271216	26271216	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr6:26271216C>A	uc003nhi.2	-	1	397	c.397G>T	c.(397-399)GGG>TGG	p.G133W	uc003nhj.2_5'Flank|HIST1H2BI_uc003nhk.2_5'Flank	NM_003534	NP_003525	P68431	H31_HUMAN	H3 histone family, member H	133					blood coagulation|nucleosome assembly|regulation of gene silencing|S phase	nucleoplasm|nucleosome	DNA binding|protein binding				0						GCTCTCTCCCCACGAATGCGG	0.493			NA											17	69					5.03518e-11	6.2693e-11	0.007413	1	0
TRIM27	5987	broad.mit.edu	37	6	28872087	28872087	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr6:28872087C>A	uc003nlr.2	-	8	1661	c.1302G>T	c.(1300-1302)CAG>CAT	p.Q434H	TRIM27_uc003nls.2_Intron|TRIM27_uc003nlt.1_3'UTR	NM_006510	NP_006501	P14373	TRI27_HUMAN	ret finger protein	434	B30.2/SPRY.				cell proliferation|negative regulation of gene expression, epigenetic|negative regulation of transcription from RNA polymerase II promoter|protein trimerization|spermatogenesis|transcription, DNA-dependent	cytoplasm|integral to plasma membrane|membrane fraction|nuclear membrane|PML body	DNA binding|protein binding|transmembrane receptor protein tyrosine kinase activity|zinc ion binding			ovary(1)	1						TCCCCACCCGCTGGAGCGGGG	0.532			NA	T	RET	papillary thyroid								44	112					5.37117e-13	6.92527e-13	0.01441	1	0
CYB5R4	51167	broad.mit.edu	37	6	84630848	84630848	+	Silent	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr6:84630848T>C	uc003pkf.2	+	8	744	c.612T>C	c.(610-612)TTT>TTC	p.F204F		NM_016230	NP_057314	Q7L1T6	NB5R4_HUMAN	cytochrome b5 reductase 4	204	CS.				cell development|detection of oxygen|generation of precursor metabolites and energy|glucose homeostasis|insulin secretion|response to antibiotic|superoxide metabolic process	endoplasmic reticulum|perinuclear region of cytoplasm	cytochrome-b5 reductase activity|heme binding|NAD(P)H oxidase activity			breast(2)	2		all_cancers(76;7e-07)|Acute lymphoblastic leukemia(125;2.69e-07)|all_hematologic(105;0.000151)|all_epithelial(107;0.00128)		BRCA - Breast invasive adenocarcinoma(397;0.0871)		ATGATTCCTTTAGAGCAGAAA	0.274	Esophageal Squamous(86;1289 1332 25971 40349 52675)		NA											11	12					0	0	0.010729	0	0
AKD1	221264	broad.mit.edu	37	6	109871392	109871392	+	Silent	SNP	G	G	A	rs138836954		TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr6:109871392G>A	uc003ptn.2	-	25	2942	c.2865C>T	c.(2863-2865)GCC>GCT	p.A955A	AKD1_uc011eat.1_Silent_p.A34A	NM_001145128	NP_001138600	Q5TCS8	AKD1_HUMAN	adenylate kinase domain containing 1 isoform 1	955					nucleobase, nucleoside, nucleotide and nucleic acid metabolic process		ATP binding|nucleobase, nucleoside, nucleotide kinase activity|nucleoside-triphosphatase activity			ovary(1)	1						CTCGATACTTGGCTGCTTCTT	0.428			NA											42	69					0	0	0.006999	0	0
PDE10A	10846	broad.mit.edu	37	6	165808737	165808737	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr6:165808737C>A	uc003qun.2	-	16	1649	c.1408G>T	c.(1408-1410)GGT>TGT	p.G470C	PDE10A_uc011egj.1_RNA|PDE10A_uc011egk.1_Missense_Mutation_p.G400C|PDE10A_uc003quo.2_Missense_Mutation_p.G480C	NM_006661	NP_006652	Q9Y233	PDE10_HUMAN	phosphodiesterase 10A isoform 2	470					platelet activation|signal transduction	cytosol	3',5'-cyclic-AMP phosphodiesterase activity|3',5'-cyclic-GMP phosphodiesterase activity|cAMP binding|cGMP binding|metal ion binding			ovary(3)|skin(2)	5		Breast(66;0.000425)|Prostate(117;0.104)|Ovarian(120;0.221)		OV - Ovarian serous cystadenocarcinoma(33;1.5e-17)|BRCA - Breast invasive adenocarcinoma(81;1.8e-06)|GBM - Glioblastoma multiforme(31;1.92e-05)	Dipyridamole(DB00975)	TCAAAAGGACCAATGTCAAAG	0.333	Esophageal Squamous(22;308 615 5753 12038 40624)		NA											8	22					0.00448238	0.00464704	0.004482	1	0
CBX3	11335	broad.mit.edu	37	7	26242643	26242643	+	Splice_Site	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:26242643G>A	uc003sxt.2	+	2	135	c.24_splice	c.e2+1	p.L8_splice	HNRNPA2B1_uc003sxr.3_5'Flank|HNRNPA2B1_uc003sxs.3_5'Flank|CBX3_uc003sxu.2_Splice_Site_p.L8_splice|CBX3_uc003sxv.2_Splice_Site_p.L8_splice	NM_007276	NP_009207	Q13185	CBX3_HUMAN	chromobox homolog 3						chromatin remodeling|negative regulation of transcription, DNA-dependent|transcription, DNA-dependent	condensed chromosome, centromeric region|nuclear centromeric heterochromatin|nuclear euchromatin|nuclear inner membrane|spindle	enzyme binding|protein domain specific binding			ovary(1)	1						AACTACATTGGTAAGTTAATG	0.328			NA											7	74					0	0	0.001984	0	0
C7orf16	10842	broad.mit.edu	37	7	31732113	31732113	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:31732113C>A	uc003tcl.2	+	2	216	c.58C>A	c.(58-60)CTA>ATA	p.L20I	C7orf16_uc011kaf.1_Missense_Mutation_p.L20I	NM_006658	NP_006649	O96001	GSUB_HUMAN	G-substrate isoform 1	20					behavior|central nervous system development|intracellular protein kinase cascade|protein phosphorylation	soluble fraction				ovary(2)|central_nervous_system(1)	3			GBM - Glioblastoma multiforme(11;0.216)			ACTGGACAAGCTAGACCCTCG	0.488			NA											18	37					9.16793e-09	1.10363e-08	0.00499	1	0
NSUN5	55695	broad.mit.edu	37	7	72718748	72718748	+	Nonsense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:72718748G>A	uc003txw.2	-	6	787	c.751C>T	c.(751-753)CAA>TAA	p.Q251*	FKBP6_uc003twz.2_Intron|NSUN5_uc003txv.2_Nonsense_Mutation_p.Q251*|NSUN5_uc003txx.2_Nonsense_Mutation_p.Q213*|NSUN5_uc011kev.1_Nonsense_Mutation_p.Q251*	NM_018044	NP_060514	Q96P11	NSUN5_HUMAN	NOL1/NOP2/Sun domain family, member 5 isoform 2	251							methyltransferase activity				0		Lung NSC(55;0.163)				ACTCACCCTTGGTTCTTCAGA	0.557			NA											10	33					0	0	0.00245	0	0
CROT	54677	broad.mit.edu	37	7	87022269	87022269	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:87022269G>T	uc003uit.2	+	17	1849	c.1604G>T	c.(1603-1605)GGA>GTA	p.G535V	CROT_uc003uiu.2_Missense_Mutation_p.G563V	NM_021151	NP_066974	Q9UKG9	OCTC_HUMAN	peroxisomal carnitine O-octanoyltransferase	535	Poly-Gly.				fatty acid beta-oxidation using acyl-CoA oxidase|generation of precursor metabolites and energy|transport	peroxisomal matrix	carnitine O-octanoyltransferase activity			ovary(2)|lung(1)	3	Esophageal squamous(14;0.0058)|all_lung(186;0.201)|Lung NSC(181;0.203)				L-Carnitine(DB00583)	CACAGCGGAGGAGGTGGAAAT	0.383			NA											39	154					1.96642e-18	2.67096e-18	0.006999	1	0
ZAN	7455	broad.mit.edu	37	7	100348417	100348417	+	Silent	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:100348417G>C	uc003uwj.2	+	12	1584	c.1419G>C	c.(1417-1419)GCG>GCC	p.A473A	ZAN_uc003uwk.2_Silent_p.A473A|ZAN_uc003uwl.2_RNA|ZAN_uc010lhh.2_RNA|ZAN_uc010lhi.2_RNA	NM_003386	NP_003377	Q9Y493	ZAN_HUMAN	zonadhesin isoform 3	473	MAM 3.|Extracellular (Potential).				binding of sperm to zona pellucida|cell-cell adhesion	integral to membrane|plasma membrane				ovary(4)|large_intestine(3)|central_nervous_system(2)|pancreas(2)	11	Lung NSC(181;0.041)|all_lung(186;0.0581)		STAD - Stomach adenocarcinoma(171;0.19)			GAAGTCCTGCGGGGAGTCCCC	0.622			NA											8	19					0	0	0.006214	0	0
CTTNBP2	83992	broad.mit.edu	37	7	117417623	117417623	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:117417623T>A	uc003vjf.2	-	8	2812	c.2720A>T	c.(2719-2721)AAC>ATC	p.N907I		NM_033427	NP_219499	Q8WZ74	CTTB2_HUMAN	cortactin binding protein 2	907										ovary(4)|central_nervous_system(1)	5	Lung NSC(10;0.0018)|all_lung(10;0.002)			LUSC - Lung squamous cell carcinoma(290;0.133)		GTTGGCGTGGTTAATGAGGTC	0.498			NA											16	57					0	0	0.010504	0	0
IMPDH1	3614	broad.mit.edu	37	7	128040196	128040196	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:128040196C>A	uc011kol.1	-	6	678	c.572G>T	c.(571-573)GGT>GTT	p.G191V	IMPDH1_uc011kom.1_Missense_Mutation_p.G186V|IMPDH1_uc003vmt.2_Missense_Mutation_p.G166V|IMPDH1_uc003vmu.2_Missense_Mutation_p.G276V|IMPDH1_uc003vmw.2_Missense_Mutation_p.G266V|IMPDH1_uc011kon.1_Missense_Mutation_p.G243V|IMPDH1_uc003vmv.2_Missense_Mutation_p.G240V|IMPDH1_uc003vmx.2_Missense_Mutation_p.G199V|IMPDH1_uc003vmy.2_Missense_Mutation_p.G207V	NM_001142573	NP_001136045	P20839	IMDH1_HUMAN	inosine monophosphate dehydrogenase 1 isoform e	191	CBS 2.				GMP biosynthetic process|purine base metabolic process	cytosol|nucleus	DNA binding|IMP dehydrogenase activity|metal ion binding			skin(2)|lung(1)|central_nervous_system(1)	4					Mycophenolate mofetil(DB00688)|Mycophenolic acid(DB01024)|NADH(DB00157)|Ribavirin(DB00811)|Thioguanine(DB00352)	CAACGTCACACCTGCTGGAGC	0.562			NA											44	179					4.64027e-19	6.33671e-19	0.01441	1	0
TAS2R41	259287	broad.mit.edu	37	7	143175434	143175434	+	Missense_Mutation	SNP	C	C	G			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:143175434C>G	uc003wdc.1	+	1	469	c.469C>G	c.(469-471)CAA>GAA	p.Q157E	uc003wda.2_Intron	NM_176883	NP_795364	P59536	T2R41_HUMAN	taste receptor, type 2, member 41	157	Extracellular (Potential).				sensory perception of taste	integral to membrane	G-protein coupled receptor activity			pancreas(1)|skin(1)	2	Melanoma(164;0.15)					CCCTGTATATCAAGAATTTTT	0.443			NA											12	46					0	0	0.001855	0	0
OR2F2	135948	broad.mit.edu	37	7	143633211	143633211	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:143633211G>C	uc011ktv.1	+	1	886	c.886G>C	c.(886-888)GAG>CAG	p.E296Q		NM_001004685	NP_001004685	O95006	OR2F2_HUMAN	olfactory receptor, family 2, subfamily F,	296	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(3)|skin(1)	4	Melanoma(164;0.0903)					AAGGAATAAAGAGGTGAAGGG	0.433			NA											16	56					0	0	0.006122	0	0
OR2A25	392138	broad.mit.edu	37	7	143771421	143771421	+	Missense_Mutation	SNP	A	A	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr7:143771421A>C	uc011ktx.1	+	1	109	c.109A>C	c.(109-111)ATT>CTT	p.I37L		NM_001004488	NP_001004488	A4D2G3	O2A25_HUMAN	olfactory receptor, family 2, subfamily A,	37	Helical; Name=1; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0	Melanoma(164;0.0783)					CTACATCTTCATTCTGTTGGG	0.522			NA											35	78					0	0	0.013726	0	0
NKAIN3	286183	broad.mit.edu	37	8	63492112	63492112	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:63492112G>C	uc010lyq.1	+	2	201	c.69G>C	c.(67-69)GAG>GAC	p.E23D		NM_173688	NP_775959	Q8N8D7	NKAI3_HUMAN	Na+/K+ transporting ATPase interacting 3	23						integral to membrane|plasma membrane					0	Breast(64;0.127)	Lung NSC(129;0.187)				CAGCATTAGAGAGGCAGATCT	0.383			NA											6	162					0	0	0.001984	0	0
EYA1	2138	broad.mit.edu	37	8	72127907	72127907	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:72127907C>A	uc003xys.3	-	14	1704	c.1417G>T	c.(1417-1419)GCC>TCC	p.A473S	EYA1_uc003xyr.3_Missense_Mutation_p.A438S|EYA1_uc003xyt.3_Missense_Mutation_p.A440S|EYA1_uc010lzf.2_Missense_Mutation_p.A400S|EYA1_uc003xyu.2_Missense_Mutation_p.A473S|EYA1_uc011lfe.1_Missense_Mutation_p.A467S|EYA1_uc003xyv.2_Missense_Mutation_p.A351S	NM_172058	NP_742055	Q99502	EYA1_HUMAN	eyes absent 1 isoform b	473					double-strand break repair|histone dephosphorylation|positive regulation of DNA repair|protein sumoylation|regulation of transcription, DNA-dependent|response to ionizing radiation|sensory perception of sound|transcription, DNA-dependent	cytoplasm|nucleus	metal ion binding|protein tyrosine phosphatase activity			ovary(2)|central_nervous_system(2)|upper_aerodigestive_tract(1)	5	Breast(64;0.046)		Epithelial(68;0.0837)|all cancers(69;0.247)			TCGGTCAGGGCTTCAATTTCG	0.542			NA											22	79					1.50039e-11	1.88663e-11	0.012319	1	0
ZFHX4	79776	broad.mit.edu	37	8	77768313	77768313	+	Silent	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:77768313G>C	uc003yav.2	+	10	9408	c.9021G>C	c.(9019-9021)CCG>CCC	p.P3007P	ZFHX4_uc003yau.1_Silent_p.P3052P|ZFHX4_uc003yaw.1_Silent_p.P3007P	NM_024721	NP_078997	Q86UP3	ZFHX4_HUMAN	zinc finger homeodomain 4	3007						nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(8)|large_intestine(4)|breast(2)|lung(1)	15			BRCA - Breast invasive adenocarcinoma(89;0.0895)			ACTTGGCTCCGACCACGGTTC	0.507			NA								HNSCC(33;0.089)			12	149					0	0	0.00245	0	0
PGCP	10404	broad.mit.edu	37	8	97797153	97797153	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:97797153G>T	uc003yhw.2	+	2	194	c.28G>T	c.(28-30)GGT>TGT	p.G10C	PGCP_uc010mbe.2_Missense_Mutation_p.G10C	NM_016134	NP_057218	Q9Y646	PGCP_HUMAN	plasma glutamate carboxypeptidase precursor	10					peptide metabolic process|proteolysis	cytoplasm|extracellular space	metal ion binding|metallocarboxypeptidase activity			upper_aerodigestive_tract(1)	1	Breast(36;1.86e-05)					CGCATTTTTCGGTGGTGTTCA	0.338			NA											20	127					2.4624e-09	2.99258e-09	0.008871	1	0
PGCP	10404	broad.mit.edu	37	8	97847327	97847327	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:97847327G>A	uc003yhw.2	+	3	726	c.560G>A	c.(559-561)CGA>CAA	p.R187Q	PGCP_uc010mbe.2_Missense_Mutation_p.R187Q	NM_016134	NP_057218	Q9Y646	PGCP_HUMAN	plasma glutamate carboxypeptidase precursor	187					peptide metabolic process|proteolysis	cytoplasm|extracellular space	metal ion binding|metallocarboxypeptidase activity			upper_aerodigestive_tract(1)	1	Breast(36;1.86e-05)					GTGCAATACCGAACGCAGGGG	0.502			NA											15	74					0	0	0.004007	0	0
KCNS2	3788	broad.mit.edu	37	8	99441351	99441351	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:99441351C>A	uc003yin.2	+	2	1494	c.1144C>A	c.(1144-1146)CCA>ACA	p.P382T		NM_020697	NP_065748	Q9ULS6	KCNS2_HUMAN	potassium voltage-gated channel,	382						voltage-gated potassium channel complex	voltage-gated potassium channel activity			ovary(1)	1	Breast(36;2.4e-06)		OV - Ovarian serous cystadenocarcinoma(57;0.0448)			GGATGTGGTCCCAGGGACCAC	0.592	Pancreas(138;844 2489 9202 24627)		NA											21	115					3.51602e-12	4.46534e-12	0.008871	1	0
VPS13B	157680	broad.mit.edu	37	8	100866425	100866425	+	Missense_Mutation	SNP	C	C	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:100866425C>T	uc003yiv.2	+	56	10994	c.10883C>T	c.(10882-10884)GCG>GTG	p.A3628V	VPS13B_uc003yiw.2_Missense_Mutation_p.A3603V	NM_017890	NP_060360	Q7Z7G8	VP13B_HUMAN	vacuolar protein sorting 13B isoform 5	3628					protein transport					ovary(7)|skin(4)|lung(3)|central_nervous_system(2)|pancreas(2)|breast(1)|kidney(1)	20	Breast(36;3.73e-07)		OV - Ovarian serous cystadenocarcinoma(57;0.00636)			TTCACCACTGCGAGGCAGCTT	0.557	Colon(161;2205 2542 7338 31318)		NA											14	59					0	0	0.001855	0	0
RNF139	11236	broad.mit.edu	37	8	125487455	125487455	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:125487455C>A	uc003yrc.2	+	1	448	c.105C>A	c.(103-105)GAC>GAA	p.D35E	uc003yrb.2_5'Flank	NM_007218	NP_009149	Q8WU17	RN139_HUMAN	ring finger protein 139	35					negative regulation of cell proliferation|regulation of protein ubiquitination	endoplasmic reticulum membrane|integral to membrane	protein binding|receptor activity|ubiquitin-protein ligase activity|zinc ion binding			kidney(1)	1	Ovarian(258;0.00438)|all_neural(195;0.0779)|Hepatocellular(40;0.108)		STAD - Stomach adenocarcinoma(47;0.00288)			ACATCATCGACGCCATCTTCA	0.637			NA							Renal_Cell_Cancer_associated_with_constitutional_translocation_of_chromosome_3				9	105					1.58986e-06	1.79478e-06	0.008291	1	0
PARP10	84875	broad.mit.edu	37	8	145057451	145057451	+	Missense_Mutation	SNP	G	G	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:145057451G>A	uc003zal.3	-	8	2414	c.2306C>T	c.(2305-2307)ACC>ATC	p.T769I	PARP10_uc003zak.3_Missense_Mutation_p.T466I|PARP10_uc011lku.1_Missense_Mutation_p.T781I|PARP10_uc011lkv.1_Intron|PARP10_uc003zam.2_Missense_Mutation_p.T760I	NM_032789	NP_116178	Q53GL7	PAR10_HUMAN	poly (ADP-ribose) polymerase family, member 10	769	Myc binding.					Golgi apparatus|nucleolus	NAD+ ADP-ribosyltransferase activity|nucleotide binding			ovary(2)|upper_aerodigestive_tract(1)|lung(1)|breast(1)|pancreas(1)	6	all_cancers(97;8.2e-11)|all_epithelial(106;1.1e-09)|Lung NSC(106;5.89e-05)|all_lung(105;0.000174)|Ovarian(258;0.0173)|Acute lymphoblastic leukemia(118;0.155)		OV - Ovarian serous cystadenocarcinoma(54;1.31e-40)|Epithelial(56;1.16e-39)|all cancers(56;6.43e-35)|Colorectal(110;0.055)|BRCA - Breast invasive adenocarcinoma(115;0.105)			ACGGAGGATGGTGCAGTCACC	0.682			NA											5	19					0	0	0.000602	0	0
ZNF251	90987	broad.mit.edu	37	8	145948540	145948540	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr8:145948540T>A	uc003zdv.3	-	5	761	c.505A>T	c.(505-507)ACC>TCC	p.T169S		NM_138367	NP_612376	Q9BRH9	ZN251_HUMAN	zinc finger protein 251	169					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0	all_cancers(97;3.54e-11)|all_epithelial(106;2.65e-10)|Lung NSC(106;4.08e-05)|all_lung(105;0.000125)|Ovarian(258;0.0173)|Acute lymphoblastic leukemia(118;0.155)		OV - Ovarian serous cystadenocarcinoma(54;2.75e-39)|Epithelial(56;7.54e-38)|all cancers(56;6.19e-33)|Colorectal(110;0.055)|BRCA - Breast invasive adenocarcinoma(115;0.11)	GBM - Glioblastoma multiforme(99;0.198)		CTGCCCACGGTAGCTTCTGTT	0.448			NA											26	95					0	0	0.005443	0	0
FREM1	158326	broad.mit.edu	37	9	14776076	14776076	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr9:14776076C>A	uc003zlm.2	-	25	5158	c.4568G>T	c.(4567-4569)GGC>GTC	p.G1523V	FREM1_uc010mic.2_Intron|FREM1_uc003zlk.2_5'Flank|FREM1_uc003zll.2_Missense_Mutation_p.G59V	NM_144966	NP_659403	Q5H8C1	FREM1_HUMAN	FRAS1 related extracellular matrix 1 precursor	1523	CSPG 11.				cell communication|multicellular organismal development	basement membrane|integral to membrane	metal ion binding|sugar binding			ovary(2)|breast(2)|pancreas(1)	5				GBM - Glioblastoma multiforme(50;3.53e-06)		GGAAAGCAGGCCCACGGCCCC	0.607			NA											38	120					8.16277e-20	1.12682e-19	0.006999	1	0
KLHL9	55958	broad.mit.edu	37	9	21334009	21334009	+	Missense_Mutation	SNP	G	G	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr9:21334009G>C	uc003zoy.2	-	1	1421	c.850C>G	c.(850-852)CCA>GCA	p.P284A	KLHL9_uc003zow.2_Intron|KLHL9_uc003zox.2_RNA	NM_018847	NP_061335	Q9P2J3	KLHL9_HUMAN	kelch-like 9	284					cytokinesis|mitosis|protein ubiquitination	Cul3-RING ubiquitin ligase complex|midbody				ovary(3)|skin(1)	4				Lung(24;8.52e-27)|LUSC - Lung squamous cell carcinoma(38;1.4e-13)|OV - Ovarian serous cystadenocarcinoma(39;0.118)		TGCATCACTGGCTGCATATAT	0.423			NA											29	68					0	0	0.007291	0	0
DCAF10	79269	broad.mit.edu	37	9	37857288	37857288	+	Missense_Mutation	SNP	T	T	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr9:37857288T>A	uc004aao.2	+	5	1179	c.1105T>A	c.(1105-1107)TGT>AGT	p.C369S	DCAF10_uc010mlz.2_Missense_Mutation_p.C196S|DCAF10_uc004aap.2_Intron	NM_024345	NP_077321	Q5QP82	DCA10_HUMAN	WD repeat domain 32	369	Ser-rich.					CUL4 RING ubiquitin ligase complex				central_nervous_system(1)	1						TGGCTCACCTTGTCATCATAG	0.348			NA											36	146					0	0	0.00874	0	0
ZBTB26	57684	broad.mit.edu	37	9	125681304	125681304	+	Missense_Mutation	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chr9:125681304C>A	uc004bnj.2	-	2	1122	c.910G>T	c.(910-912)GGC>TGC	p.G304C	ZBTB26_uc004bnk.2_Missense_Mutation_p.G304C	NM_020924	NP_065975	Q9HCK0	ZBT26_HUMAN	zinc finger and BTB domain containing 26	304	C2H2-type 2.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0						AAAGTCTTGCCGCAGAGTAGA	0.458			NA											36	50					1.06647e-15	1.41085e-15	0.003755	1	0
CA5B	11238	broad.mit.edu	37	X	15800702	15800702	+	Missense_Mutation	SNP	G	G	T			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chrX:15800702G>T	uc004cxe.2	+	8	986	c.869G>T	c.(868-870)CGC>CTC	p.R290L		NM_007220	NP_009151	Q9Y2D0	CAH5B_HUMAN	carbonic anhydrase VB, mitochondrial precursor	290					one-carbon metabolic process	mitochondrion	carbonate dehydratase activity|zinc ion binding				0	Hepatocellular(33;0.183)					CTGATGAATCGCACTGTTCGT	0.493			NA											8	26					1.06961e-07	1.25779e-07	0.00308	1	0
KDM5C	8242	broad.mit.edu	37	X	53228025	53228025	+	Silent	SNP	C	C	A			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chrX:53228025C>A	uc004drz.2	-	16	2822	c.2289G>T	c.(2287-2289)CTG>CTT	p.L763L	KDM5C_uc011moc.1_RNA|KDM5C_uc011mod.1_Silent_p.L696L|KDM5C_uc004dsa.2_Silent_p.L762L	NM_004187	NP_004178	P41229	KDM5C_HUMAN	jumonji, AT rich interactive domain 1C isoform	763					chromatin modification|regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen|protein binding|zinc ion binding			kidney(9)|ovary(5)|salivary_gland(1)|autonomic_ganglia(1)|haematopoietic_and_lymphoid_tissue(1)|oesophagus(1)	18						CCCGAACCTTCAGCTTATGCA	0.587			NA	N|F|S		clear cell renal carcinoma								9	56					3.09899e-07	3.54569e-07	0.004482	1	0
GPR112	139378	broad.mit.edu	37	X	135432398	135432398	+	Missense_Mutation	SNP	T	T	C			TCGA-55-7914-01A-11D-2167-08	TCGA-55-7914-10A-01D-2167-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	59bffff6-361e-4517-b620-42bb23398b5c	7fc655ab-9a59-4b5b-9b79-a38e3138445d	g.chrX:135432398T>C	uc004ezu.1	+	6	6824	c.6533T>C	c.(6532-6534)CTT>CCT	p.L2178P	GPR112_uc010nsb.1_Missense_Mutation_p.L1973P|GPR112_uc010nsc.1_Missense_Mutation_p.L1945P	NM_153834	NP_722576	Q8IZF6	GP112_HUMAN	G-protein coupled receptor 112	2178	Extracellular (Potential).				neuropeptide signaling pathway	integral to membrane|plasma membrane	G-protein coupled receptor activity			ovary(5)|large_intestine(2)|skin(2)|lung(1)|breast(1)|pancreas(1)	12	Acute lymphoblastic leukemia(192;0.000127)					CTGGACTCCCTTCTAAATATA	0.428			NA											52	87					0	0	0.01441	0	0
