Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	ACHILLES_Top_Genes	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
SLC25A33	84275	broad.mit.edu	37	1	9640262	9640262	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:9640262G>A	uc001apw.2	+	6	956	c.733G>A	c.(733-735)GGC>AGC	p.G245S	SLC25A33_uc001apx.2_Missense_Mutation_p.G178S	NM_032315	NP_115691	Q9BSK2	S2533_HUMAN	mitochondrial carrier protein MGC4399	245	Solcar 3.|Helical; Name=5; (Potential).				transport	integral to membrane|mitochondrial inner membrane					0	all_lung(157;0.246)	all_epithelial(116;1.16e-18)|all_lung(118;2.44e-05)|Lung NSC(185;4.08e-05)|Renal(390;0.000147)|Breast(348;0.00191)|Colorectal(325;0.00205)|Hepatocellular(190;0.00825)|Ovarian(437;0.0228)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0228)|Colorectal(212;6.01e-08)|COAD - Colon adenocarcinoma(227;1.44e-05)|Kidney(185;0.000262)|KIRC - Kidney renal clear cell carcinoma(229;0.000957)|BRCA - Breast invasive adenocarcinoma(304;0.0019)|STAD - Stomach adenocarcinoma(132;0.00355)|READ - Rectum adenocarcinoma(331;0.0419)		TCTTTCTAAGGGCTGTGCCTC	0.428			NA											32	11					0	0	0.004289	0	0
PAX7	5081	broad.mit.edu	37	1	19062154	19062154	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:19062154C>T	uc001bay.2	+	8	1782	c.1184C>T	c.(1183-1185)GCG>GTG	p.A395V	PAX7_uc001baz.2_Missense_Mutation_p.A393V|PAX7_uc010oct.1_Missense_Mutation_p.A395V	NM_002584	NP_002575	P23759	PAX7_HUMAN	paired box 7 isoform 1	395					anti-apoptosis	nucleus	protein binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity		PAX7/FOXO1(197)	soft_tissue(197)|lung(3)|prostate(1)|ovary(1)|breast(1)	203		Colorectal(325;3.46e-05)|all_lung(284;0.000439)|Renal(390;0.000518)|Lung NSC(340;0.000543)|Breast(348;0.00093)|Ovarian(437;0.00768)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00609)|BRCA - Breast invasive adenocarcinoma(304;4.71e-05)|Kidney(64;0.000279)|KIRC - Kidney renal clear cell carcinoma(64;0.00371)|STAD - Stomach adenocarcinoma(196;0.00658)|READ - Rectum adenocarcinoma(331;0.0576)		AACCCCAGTGCGGTGCCCCCG	0.652			NA	T	FOXO1A	alveolar rhabdomyosarcoma								18	43					0	0	0.00499	0	0
HSPG2	3339	broad.mit.edu	37	1	22211527	22211527	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:22211527C>A	uc001bfj.2	-	11	1374	c.1334G>T	c.(1333-1335)GGC>GTC	p.G445V	HSPG2_uc009vqd.2_Missense_Mutation_p.G445V	NM_005529	NP_005520	P98160	PGBM_HUMAN	heparan sulfate proteoglycan 2 precursor	445	Ig-like C2-type 1.				angiogenesis|cell adhesion|lipid metabolic process|lipoprotein metabolic process	basement membrane|extracellular space|plasma membrane	protein C-terminus binding			ovary(5)|large_intestine(2)|central_nervous_system(1)|skin(1)	9		Colorectal(325;3.46e-05)|all_lung(284;7.93e-05)|Lung NSC(340;8.71e-05)|Renal(390;0.000219)|Breast(348;0.00222)|Ovarian(437;0.00308)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0498)|OV - Ovarian serous cystadenocarcinoma(117;1.14e-26)|Colorectal(126;4.18e-07)|COAD - Colon adenocarcinoma(152;1.82e-05)|GBM - Glioblastoma multiforme(114;3.13e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000756)|STAD - Stomach adenocarcinoma(196;0.00656)|KIRC - Kidney renal clear cell carcinoma(1967;0.00942)|READ - Rectum adenocarcinoma(331;0.0721)|Lung(427;0.223)	Becaplermin(DB00102)|Palifermin(DB00039)	GGGGATGTGGCCCCAGTTGAG	0.652			NA											13	17					0.00010058	0.000115886	0.001368	1	0
C1QB	713	broad.mit.edu	37	1	22986050	22986051	+	Missense_Mutation	DNP	CC	CC	AA			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	CC	CC	-	-	CC	CC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:22986050_22986051CC>AA	uc001bgd.2	+	2	233_234	c.101_102CC>AA	c.(100-102)CCC>CAA	p.P34Q		NM_000491	NP_000482	P02746	C1QB_HUMAN	complement component 1, q subcomponent, B chain	34					complement activation, classical pathway|innate immune response	collagen|complement component C1 complex				breast(1)	1		Colorectal(325;3.46e-05)|Lung NSC(340;6.55e-05)|all_lung(284;9.87e-05)|Renal(390;0.000219)|Breast(348;0.00262)|Ovarian(437;0.00308)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0227)|OV - Ovarian serous cystadenocarcinoma(117;7.06e-27)|Colorectal(126;1.58e-07)|GBM - Glioblastoma multiforme(114;6.72e-06)|COAD - Colon adenocarcinoma(152;1.13e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000551)|KIRC - Kidney renal clear cell carcinoma(1967;0.0027)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.198)	Abciximab(DB00054)|Adalimumab(DB00051)|Alefacept(DB00092)|Alemtuzumab(DB00087)|Basiliximab(DB00074)|Bevacizumab(DB00112)|Cetuximab(DB00002)|Daclizumab(DB00111)|Efalizumab(DB00095)|Etanercept(DB00005)|Gemtuzumab ozogamicin(DB00056)|Ibritumomab(DB00078)|Immune globulin(DB00028)|Muromonab(DB00075)|Natalizumab(DB00108)|Palivizumab(DB00110)|Rituximab(DB00073)|Tositumomab(DB00081)|Trastuzumab(DB00072)	TGCACCGGGCCCCCAGCCATCC	0.594			NA											6	12					0	0	0.004672	0	0
CSMD2	114784	broad.mit.edu	37	1	34006140	34006140	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:34006140G>T	uc001bxn.1	-	59	9213	c.9184C>A	c.(9184-9186)CTG>ATG	p.L3062M	CSMD2_uc001bxm.1_Missense_Mutation_p.L3206M	NM_052896	NP_443128	Q7Z408	CSMD2_HUMAN	CUB and Sushi multiple domains 2	3062	Sushi 23.|Extracellular (Potential).					integral to membrane|plasma membrane	protein binding			ovary(6)|skin(5)|pancreas(1)	12		Myeloproliferative disorder(586;0.0294)|all_neural(195;0.249)				CACTGAGGCAGCTCTCCGGTC	0.587			NA											43	49					2.43468e-25	3.91024e-25	0.00361	1	0
TRIT1	54802	broad.mit.edu	37	1	40312906	40312906	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:40312906T>G	uc010oiz.1	-	8	1006	c.992A>C	c.(991-993)AAC>ACC	p.N331T	TRIT1_uc001cec.3_RNA|TRIT1_uc001ced.3_Missense_Mutation_p.N27T|TRIT1_uc001cee.3_RNA|TRIT1_uc001cef.3_RNA|TRIT1_uc001ceg.3_Missense_Mutation_p.N85T|TRIT1_uc001ceh.3_Missense_Mutation_p.N85T|TRIT1_uc009vvv.2_Intron|TRIT1_uc001cei.3_Missense_Mutation_p.N85T|TRIT1_uc001ceq.2_Missense_Mutation_p.N27T|TRIT1_uc001cek.2_Missense_Mutation_p.N27T|TRIT1_uc009vvx.2_Intron|TRIT1_uc001cel.2_Intron|TRIT1_uc001cem.2_Missense_Mutation_p.N249T|TRIT1_uc001cen.2_Missense_Mutation_p.N85T|TRIT1_uc001ceo.2_Missense_Mutation_p.N85T|TRIT1_uc001cep.2_Missense_Mutation_p.N85T	NM_017646	NP_060116	Q9H3H1	MOD5_HUMAN	tRNA isopentenyltransferase 1 precursor	331	Interaction with substrate tRNA (By similarity).				tRNA processing	mitochondrion	ATP binding|metal ion binding|tRNA dimethylallyltransferase activity			ovary(1)	1	all_cancers(7;4.55e-14)|all_lung(5;1.23e-16)|all_epithelial(6;2.17e-16)|Lung NSC(20;7.03e-07)|Ovarian(52;0.00167)|all_hematologic(146;0.0501)|Acute lymphoblastic leukemia(166;0.074)	Myeloproliferative disorder(586;0.0393)	OV - Ovarian serous cystadenocarcinoma(33;3.29e-18)|Epithelial(16;3.07e-17)|all cancers(16;6.21e-16)|LUSC - Lung squamous cell carcinoma(16;0.000261)|Lung(16;0.000457)			CAAAAAACGGTTTTTAACCCA	0.358			NA											22	52					0	0	0.003954	0	0
RLF	6018	broad.mit.edu	37	1	40701680	40701680	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:40701680C>T	uc001cfc.3	+	8	1337	c.1306C>T	c.(1306-1308)CCA>TCA	p.P436S	RLF_uc001cfd.3_Missense_Mutation_p.P127S	NM_012421	NP_036553	Q13129	RLF_HUMAN	rearranged L-myc fusion	436					chromosome organization|DNA integration|DNA mediated transformation|positive regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent		DNA binding|protein binding|zinc ion binding			ovary(2)|pancreas(1)	3	Lung NSC(20;4.38e-06)|Ovarian(52;0.00167)|all_hematologic(146;0.0501)|Acute lymphoblastic leukemia(166;0.074)	Myeloproliferative disorder(586;0.0255)	OV - Ovarian serous cystadenocarcinoma(33;5.87e-19)|Epithelial(16;7.02e-16)|all cancers(16;1.69e-14)|Lung(16;0.0427)|LUSC - Lung squamous cell carcinoma(16;0.0461)			ATATTTGCAACCAGATCAAAA	0.373			NA											89	82					0	0	0.00361	0	0
DOCK7	85440	broad.mit.edu	37	1	62995065	62995065	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:62995065T>A	uc001daq.2	-	30	3698	c.3664A>T	c.(3664-3666)AGT>TGT	p.S1222C	DOCK7_uc001dan.2_Missense_Mutation_p.S1083C|DOCK7_uc001dao.2_Missense_Mutation_p.S1083C|DOCK7_uc001dap.2_Missense_Mutation_p.S1191C|DOCK7_uc001dam.2_Missense_Mutation_p.S402C|DOCK7_uc010oov.1_Missense_Mutation_p.S50C	NM_033407	NP_212132	Q96N67	DOCK7_HUMAN	dedicator of cytokinesis 7	1222					activation of Rac GTPase activity|axonogenesis|establishment of neuroblast polarity|microtubule cytoskeleton organization|positive regulation of peptidyl-serine phosphorylation	axon|basal part of cell|growth cone	GTP binding|guanyl-nucleotide exchange factor activity|Rac GTPase binding			ovary(2)	2						GAGTCGTGACTGGAGAGTAAA	0.413			NA											27	26					0	0	0.005443	0	0
WDR78	79819	broad.mit.edu	37	1	67327898	67327898	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:67327898G>A	uc001dcx.2	-	7	1084	c.1028C>T	c.(1027-1029)TCA>TTA	p.S343L	WDR78_uc001dcy.2_Missense_Mutation_p.S343L|WDR78_uc009waw.2_Missense_Mutation_p.S89L|WDR78_uc009wax.2_RNA	NM_024763	NP_079039	Q5VTH9	WDR78_HUMAN	WD repeat domain 78 isoform 1	343										ovary(2)	2						TTTACTACTTGACTCAACCAC	0.338			NA											7	72					0	0	0.00308	0	0
LRRC7	57554	broad.mit.edu	37	1	70397207	70397207	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:70397207C>A	uc001dep.2	+	6	581	c.551C>A	c.(550-552)GCC>GAC	p.A184D	LRRC7_uc009wbg.2_5'UTR	NM_020794	NP_065845	Q96NW7	LRRC7_HUMAN	leucine rich repeat containing 7	184						centrosome|focal adhesion|nucleolus	protein binding			ovary(9)|breast(2)|central_nervous_system(2)|liver(1)	14						CACAAACTGGCCCAGTTGGAA	0.403			NA											13	16					6.72482e-11	9.23357e-11	0.003163	1	0
LRRC7	57554	broad.mit.edu	37	1	70504740	70504740	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:70504740T>A	uc001dep.2	+	19	3149	c.3119T>A	c.(3118-3120)GTG>GAG	p.V1040E	LRRC7_uc009wbg.2_Missense_Mutation_p.V324E|LRRC7_uc001deq.2_Missense_Mutation_p.V281E	NM_020794	NP_065845	Q96NW7	LRRC7_HUMAN	leucine rich repeat containing 7	1040						centrosome|focal adhesion|nucleolus	protein binding			ovary(9)|breast(2)|central_nervous_system(2)|liver(1)	14						CAAGGATCAGTGGAAGTGAAA	0.443			NA											30	31					0	0	0.002096	0	0
LRRC7	57554	broad.mit.edu	37	1	70541966	70541966	+	Silent	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:70541966T>C	uc001dep.2	+	22	4353	c.4323T>C	c.(4321-4323)GAT>GAC	p.D1441D	LRRC7_uc009wbg.2_Silent_p.D725D|LRRC7_uc001deq.2_Silent_p.D635D	NM_020794	NP_065845	Q96NW7	LRRC7_HUMAN	leucine rich repeat containing 7	1441						centrosome|focal adhesion|nucleolus	protein binding			ovary(9)|breast(2)|central_nervous_system(2)|liver(1)	14						GGAGTATGGATGGATATCCAG	0.458			NA											12	70					0	0	0.000978	0	0
LRRC8D	55144	broad.mit.edu	37	1	90398902	90398902	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:90398902G>C	uc001dnm.2	+	3	700	c.275G>C	c.(274-276)GGG>GCG	p.G92A	LRRC8D_uc001dnn.2_Missense_Mutation_p.G92A	NM_001134479	NP_001127951	Q7L1W4	LRC8D_HUMAN	leucine rich repeat containing 8 family, member	92						integral to membrane	protein binding			ovary(2)	2		all_lung(203;0.0894)|Lung NSC(277;0.227)		all cancers(265;0.0109)|Epithelial(280;0.0427)		GACCAAGATGGGCGGACAACA	0.498			NA											4	39					0	0	0.000248	0	0
EPS8L3	79574	broad.mit.edu	37	1	110300959	110300959	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:110300959G>T	uc001dyr.1	-	8	841	c.696C>A	c.(694-696)CCC>CCA	p.P232P	EPS8L3_uc001dys.1_Silent_p.P232P|EPS8L3_uc001dyq.1_Silent_p.P233P|EPS8L3_uc009wfm.1_Silent_p.P199P|EPS8L3_uc009wfn.1_Silent_p.P207P|EPS8L3_uc009wfo.1_Silent_p.P179P	NM_133181	NP_573444	Q8TE67	ES8L3_HUMAN	epidermal growth factor receptor pathway	232	Pro-rich.					cytoplasm	protein binding			ovary(2)|skin(1)	3		all_epithelial(167;1.95e-05)|all_lung(203;0.000135)|Lung NSC(277;0.000269)		Lung(183;0.0245)|Colorectal(144;0.0365)|all cancers(265;0.103)|Epithelial(280;0.109)|LUSC - Lung squamous cell carcinoma(189;0.137)|COAD - Colon adenocarcinoma(174;0.141)		CTGGGTCCTCGGGGGAAGAGG	0.607			NA											42	91					1.48646e-12	2.10648e-12	0.002522	1	0
KPRP	448834	broad.mit.edu	37	1	152733006	152733006	+	Silent	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:152733006T>A	uc001fal.1	+	2	1000	c.942T>A	c.(940-942)ATT>ATA	p.I314I		NM_001025231	NP_001020402	Q5T749	KPRP_HUMAN	keratinocyte proline-rich protein	314	Pro-rich.					cytoplasm				ovary(4)|pancreas(1)	5	Hepatocellular(266;0.0877)|all_hematologic(923;0.127)|Melanoma(130;0.242)		LUSC - Lung squamous cell carcinoma(543;0.206)			GCCGCCCCATTTCAAGCTGCT	0.587			NA											70	44					0	0	0.00361	0	0
SPRR2G	6706	broad.mit.edu	37	1	153122499	153122499	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:153122499G>T	uc009wod.1	-	2	209	c.88C>A	c.(88-90)CCG>ACG	p.P30T		NM_001014291	NP_001014313	Q9BYE4	SPR2G_HUMAN	small proline-rich protein 2G	30	3 X 9 AA approximate tandem repeats.|2.				keratinization	cornified envelope|cytoplasm					0	all_lung(78;1.78e-30)|Lung NSC(65;7.29e-29)|Hepatocellular(266;0.0877)|all_hematologic(923;0.127)|Melanoma(130;0.242)		LUSC - Lung squamous cell carcinoma(543;0.171)			GGGCACTTCGGGGGTGGACAT	0.607			NA											77	86					5.04879e-28	8.20815e-28	0.00361	1	0
TDRD10	126668	broad.mit.edu	37	1	154516441	154516441	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:154516441G>T	uc009wow.2	+	9	1344	c.506G>T	c.(505-507)GGG>GTG	p.G169V	TDRD10_uc001ffd.2_Missense_Mutation_p.G169V|TDRD10_uc001ffe.2_Missense_Mutation_p.G90V	NM_001098475	NP_001091945	Q5VZ19	TDR10_HUMAN	tudor domain containing 10 isoform a	169							nucleotide binding|RNA binding			ovary(1)	1	all_lung(78;1.72e-29)|Lung NSC(65;2.96e-27)|Hepatocellular(266;0.0877)|all_hematologic(923;0.088)		LUSC - Lung squamous cell carcinoma(543;0.185)			TCCCGCAGAGGGTCCTTCCTG	0.617			NA											106	194					1.06508e-68	1.82094e-68	0.00361	1	0
VHLL	391104	broad.mit.edu	37	1	156268904	156268904	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:156268904C>T	uc001fok.2	-	1	525	c.77G>A	c.(76-78)TGC>TAC	p.C26Y		NM_001004319	NP_001004319	Q6RSH7	VHLL_HUMAN	von Hippel-Lindau tumor suppressor-like	26					protein ubiquitination	nucleus				ovary(1)	1	Hepatocellular(266;0.158)					CTCTTCCTGGCAGTACTCTTC	0.632			NA											47	87					0	0	0.00361	0	0
USH2A	7399	broad.mit.edu	37	1	215822056	215822056	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:215822056G>T	uc001hku.1	-	66	14783	c.14396C>A	c.(14395-14397)ACT>AAT	p.T4799N		NM_206933	NP_996816	O75445	USH2A_HUMAN	usherin isoform B	4799	Fibronectin type-III 33.|Extracellular (Potential).				maintenance of organ identity|photoreceptor cell maintenance|response to stimulus|sensory perception of sound	basement membrane|cytoplasm|integral to membrane|stereocilium membrane	collagen binding			ovary(20)|upper_aerodigestive_tract(2)|skin(2)|kidney(1)|central_nervous_system(1)	26				OV - Ovarian serous cystadenocarcinoma(81;0.0547)|all cancers(67;0.0875)		AGAGTAGTTAGTGAAGGCTTG	0.527			NA								HNSCC(13;0.011)			12	40					0.00136819	0.0015561	0.001368	1	0
RYR2	6262	broad.mit.edu	37	1	237774190	237774190	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:237774190G>T	uc001hyl.1	+	36	4932	c.4812G>T	c.(4810-4812)TTG>TTT	p.L1604F		NM_001035	NP_001026	Q92736	RYR2_HUMAN	cardiac muscle ryanodine receptor	1604	Cytoplasmic (By similarity).|4 X approximate repeats.				cardiac muscle contraction|detection of calcium ion|induction of apoptosis by ionic changes|regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion|release of sequestered calcium ion into cytosol by sarcoplasmic reticulum|response to caffeine|response to hypoxia|response to redox state	calcium channel complex|cytosol|plasma membrane|plasma membrane enriched fraction|sarcoplasmic reticulum membrane	calcium ion binding|calmodulin binding|identical protein binding|protein kinase A catalytic subunit binding|protein kinase A regulatory subunit binding|receptor activity|ryanodine-sensitive calcium-release channel activity|suramin binding			ovary(17)|large_intestine(6)|central_nervous_system(6)|pancreas(3)|breast(1)	33	Ovarian(103;0.103)	all_cancers(173;0.000368)|Melanoma(53;0.0179)|all_epithelial(177;0.0225)	OV - Ovarian serous cystadenocarcinoma(106;0.00606)			ACCAGTTTTTGAAGGTAGATG	0.537			NA											6	20					3.59834e-05	4.31475e-05	0.001168	1	0
ZP4	57829	broad.mit.edu	37	1	238053218	238053218	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:238053218G>T	uc001hym.2	-	3	349	c.349C>A	c.(349-351)CAC>AAC	p.H117N	LOC100130331_uc010pyc.1_Intron	NM_021186	NP_067009	Q12836	ZP4_HUMAN	zona pellucida glycoprotein 4 preproprotein	117	Extracellular (Potential).				acrosomal vesicle exocytosis|negative regulation of binding of sperm to zona pellucida|positive regulation of acrosome reaction|positive regulation of humoral immune response|positive regulation of protein kinase activity|positive regulation of T cell proliferation|protein kinase A signaling cascade|protein kinase C signaling cascade	integral to membrane|intracellular|plasma membrane|proteinaceous extracellular matrix	acrosin binding|receptor activity			ovary(2)|skin(1)	3	Ovarian(103;0.103)	all_cancers(173;0.00175)|all_epithelial(177;0.162)|all_neural(198;0.164)|Melanoma(53;0.211)|Prostate(94;0.214)	OV - Ovarian serous cystadenocarcinoma(106;0.00989)			ACCACCTTGTGTTCAGCCGCG	0.582	NSCLC(166;160 2029 11600 18754 19936)		NA											169	100					7.29064e-110	1.25456e-109	0.00361	1	0
OR2AK2	391191	broad.mit.edu	37	1	248128815	248128815	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:248128815T>G	uc010pzd.1	+	1	182	c.182T>G	c.(181-183)ATC>AGC	p.I61S	OR2L13_uc001ids.2_Intron	NM_001004491	NP_001004491	Q8NG84	O2AK2_HUMAN	olfactory receptor, family 2, subfamily AK,	61	Helical; Name=1; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|breast(1)	2	all_cancers(71;0.000139)|all_epithelial(71;1.58e-05)|Breast(184;0.0117)|Ovarian(71;0.0377)|all_lung(81;0.127)|Lung NSC(105;0.136)		OV - Ovarian serous cystadenocarcinoma(106;0.0152)			ATCATGCTGATCCACCTCATT	0.468	Melanoma(45;390 1181 23848 28461 41504)		NA											78	127					0	0	0.00361	0	0
OR2L2	26246	broad.mit.edu	37	1	248201900	248201900	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:248201900G>A	uc001idw.2	+	1	427	c.331G>A	c.(331-333)GGG>AGG	p.G111R	OR2L13_uc001ids.2_Intron	NM_001004686	NP_001004686	Q8NH16	OR2L2_HUMAN	olfactory receptor, family 2, subfamily L,	111	Helical; Name=3; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|central_nervous_system(1)|skin(1)	3	all_cancers(71;0.000149)|all_epithelial(71;1.27e-05)|Breast(184;0.00909)|Ovarian(71;0.0377)|all_lung(81;0.127)|Lung NSC(105;0.136)		OV - Ovarian serous cystadenocarcinoma(106;0.0278)			AGTTGCAGAAGGGCTGCTCCT	0.313			NA											73	45					0	0	0.00361	0	0
OR2T33	391195	broad.mit.edu	37	1	248436905	248436905	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr1:248436905A>T	uc010pzi.1	-	1	212	c.212T>A	c.(211-213)CTG>CAG	p.L71Q		NM_001004695	NP_001004695	Q8NG76	O2T33_HUMAN	olfactory receptor, family 2, subfamily T,	71	Helical; Name=2; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			large_intestine(1)|ovary(1)	2	all_cancers(71;0.000124)|all_epithelial(71;1.03e-05)|Breast(184;0.00909)|Ovarian(71;0.0377)|all_lung(81;0.127)|Lung NSC(105;0.136)		OV - Ovarian serous cystadenocarcinoma(106;0.0245)			GGTGGAAACCAGCATCATGTC	0.552			NA											7	115					0	0	0.008291	0	0
FAM171A1	221061	broad.mit.edu	37	10	15326031	15326031	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:15326031G>A	uc001iob.2	-	2	178	c.171C>T	c.(169-171)TTC>TTT	p.F57F		NM_001010924	NP_001010924	Q5VUB5	F1711_HUMAN	hypothetical protein LOC221061 precursor	57	Extracellular (Potential).					integral to membrane				ovary(2)|breast(1)|skin(1)	4						CCTGGTTGGTGAAGATCTCGA	0.552			NA											28	50					0	0	0.00632	0	0
ITGA8	8516	broad.mit.edu	37	10	15655727	15655727	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:15655727C>T	uc001ioc.1	-	15	1485	c.1485G>A	c.(1483-1485)CTG>CTA	p.L495L	ITGA8_uc010qcb.1_Silent_p.L480L	NM_003638	NP_003629	P53708	ITA8_HUMAN	integrin, alpha 8 precursor	495	Extracellular (Potential).|FG-GAP 7.				cell differentiation|cell-cell adhesion|cell-matrix adhesion|integrin-mediated signaling pathway|nervous system development	integrin complex	receptor activity			ovary(3)|lung(3)	6						TCATTGGGTGCAGCAGAAGCT	0.413			NA											58	67					0	0	0.00361	0	0
SLC39A12	221074	broad.mit.edu	37	10	18292274	18292274	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:18292274C>T	uc001ipo.2	+	12	2207	c.1934C>T	c.(1933-1935)TCC>TTC	p.S645F	SLC39A12_uc001ipn.2_Missense_Mutation_p.S608F|SLC39A12_uc001ipp.2_Missense_Mutation_p.S644F|SLC39A12_uc010qck.1_Missense_Mutation_p.S511F|uc001ipq.1_RNA	NM_001145195	NP_001138667	Q504Y0	S39AC_HUMAN	solute carrier family 39 (zinc transporter),	645	Helical; (Potential).				zinc ion transport	integral to membrane	metal ion transmembrane transporter activity			ovary(1)|breast(1)	2						TTATATTTATCCTTGGTTGAA	0.368			NA											30	64					0	0	0.008361	0	0
KIF5B	3799	broad.mit.edu	37	10	32328341	32328341	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:32328341C>G	uc001iwe.3	-	4	777	c.307G>C	c.(307-309)GAA>CAA	p.E103Q		NM_004521	NP_004512	P33176	KINH_HUMAN	kinesin family member 5B	103	Kinesin-motor.				stress granule disassembly|vesicle transport along microtubule	kinesin complex|microtubule|perinuclear region of cytoplasm|vesicle	ATP binding|microtubule binding|microtubule motor activity		KIF5B/ALK(4)	lung(4)|ovary(1)	5		Prostate(175;0.0137)				CCCATGCCTTCTGGATCATGA	0.259			NA											2	7					0	0	0.004672	0	0
GDF10	2662	broad.mit.edu	37	10	48438671	48438671	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:48438671G>T	uc001jfb.2	-	1	496	c.40C>A	c.(40-42)CCC>ACC	p.P14T	GDF10_uc009xnp.2_Missense_Mutation_p.P14T|GDF10_uc009xnq.1_Missense_Mutation_p.P14T	NM_004962	NP_004953	P55107	BMP3B_HUMAN	growth differentiation factor 10 precursor	14					growth|skeletal system development|transforming growth factor beta receptor signaling pathway	extracellular space	cytokine activity|growth factor activity			lung(1)|central_nervous_system(1)	2						agcagcTGGGGCCCGGGTCCC	0.617			NA											9	9					1.58986e-06	2.01586e-06	0.008291	1	0
FAM13C	220965	broad.mit.edu	37	10	61112030	61112030	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:61112030C>A	uc001jkn.2	-	4	458	c.324G>T	c.(322-324)CAG>CAT	p.Q108H	FAM13C_uc001jko.2_Missense_Mutation_p.Q108H|FAM13C_uc010qid.1_Missense_Mutation_p.Q25H|FAM13C_uc010qie.1_Missense_Mutation_p.Q25H|FAM13C_uc010qif.1_Missense_Mutation_p.Q130H|FAM13C_uc001jkp.2_Missense_Mutation_p.Q25H	NM_198215	NP_937858	Q8NE31	FA13C_HUMAN	hypothetical protein LOC220965 isoform 1	108										ovary(2)	2						GAGCTGCTACCTGACTTTCTC	0.562			NA											48	24					8.00217e-19	1.2401e-18	0.00361	1	0
CDH23	64072	broad.mit.edu	37	10	73468898	73468898	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:73468898C>A	uc001jrx.3	+	26	3527	c.3150C>A	c.(3148-3150)GCC>GCA	p.A1050A	CDH23_uc001jrz.2_Silent_p.A666A	NM_022124	NP_071407	Q9H251	CAD23_HUMAN	cadherin-like 23 isoform 1 precursor	1050	Cadherin 10.|Extracellular (Potential).				calcium ion transport|calcium-dependent cell-cell adhesion|cytosolic calcium ion homeostasis|equilibrioception|homophilic cell adhesion|photoreceptor cell maintenance|response to stimulus|sensory perception of sound	cytosol|integral to membrane|plasma membrane|stereocilium	calcium ion binding|protein binding			central_nervous_system(5)|large_intestine(4)|ovary(2)	11						ACCGCGATGCCGTTGTGAGAA	0.627			NA											41	25					1.30916e-28	2.14153e-28	0.00361	1	0
DPYSL4	10570	broad.mit.edu	37	10	134017425	134017425	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr10:134017425C>T	uc009ybb.2	+	13	1775	c.1621C>T	c.(1621-1623)CTA>TTA	p.L541L		NM_006426	NP_006417	O14531	DPYL4_HUMAN	dihydropyrimidinase-like 4	541					axon guidance|pyrimidine base catabolic process	cytosol	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides			central_nervous_system(2)	2		all_cancers(35;4.33e-08)|all_epithelial(44;6.75e-06)|Lung NSC(174;0.0108)|all_lung(145;0.0173)|all_neural(114;0.0726)|Glioma(114;0.172)|Melanoma(40;0.175)|Colorectal(31;0.19)		OV - Ovarian serous cystadenocarcinoma(35;7.21e-05)|Epithelial(32;8.01e-05)|all cancers(32;9.29e-05)|BRCA - Breast invasive adenocarcinoma(275;0.206)		GGGGTTCAGCCTATCTGGTGA	0.692			NA											71	37					0	0	0.00361	0	0
TPP1	1200	broad.mit.edu	37	11	6640117	6640117	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:6640117C>G	uc001mel.1	-	3	180	c.119G>C	c.(118-120)CGT>CCT	p.R40P	TPP1_uc001mek.1_5'UTR|TPP1_uc010rar.1_Missense_Mutation_p.R40P	NM_000391	NP_000382	O14773	TPP1_HUMAN	tripeptidyl-peptidase I preproprotein	40					bone resorption|cell death|lipid metabolic process|lysosome organization|nervous system development|neuromuscular process controlling balance|peptide catabolic process|protein catabolic process|proteolysis	lysosome|melanosome|soluble fraction	metal ion binding|peptide binding|protein binding|serine-type endopeptidase activity|tripeptidyl-peptidase activity				0		Medulloblastoma(188;0.00263)|all_neural(188;0.026)		Epithelial(150;3.45e-09)|BRCA - Breast invasive adenocarcinoma(625;0.131)		AGGGTCCGCACGGCCCAGGGA	0.587			NA											32	31					0	0	0.002836	0	0
PPFIBP2	8495	broad.mit.edu	37	11	7631629	7631629	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:7631629G>T	uc001mfj.3	+	6	982	c.594G>T	c.(592-594)CAG>CAT	p.Q198H	PPFIBP2_uc010rbb.1_Missense_Mutation_p.Q121H|PPFIBP2_uc001mfk.1_RNA|PPFIBP2_uc010rbc.1_Missense_Mutation_p.Q121H|PPFIBP2_uc010rbd.1_Missense_Mutation_p.Q40H|PPFIBP2_uc010rbe.1_Missense_Mutation_p.Q86H|PPFIBP2_uc001mfl.3_Missense_Mutation_p.Q55H	NM_003621	NP_003612	Q8ND30	LIPB2_HUMAN	PTPRF interacting protein, binding protein 2	198	Potential.				cell communication|DNA integration	intracellular	DNA binding|integrase activity|protein binding			ovary(2)|breast(2)	4				Epithelial(150;2.01e-07)|BRCA - Breast invasive adenocarcinoma(625;0.236)		AGAGAGAGCAGGAGGAGAAGC	0.502			NA											43	38					4.42602e-33	7.37671e-33	0.00874	1	0
ABCC8	6833	broad.mit.edu	37	11	17464360	17464360	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:17464360C>A	uc001mnc.2	-	10	1663	c.1537G>T	c.(1537-1539)GCC>TCC	p.A513S	ABCC8_uc010rcy.1_Missense_Mutation_p.A512S	NM_000352	NP_000343	Q09428	ABCC8_HUMAN	ATP-binding cassette, sub-family C, member 8	513	Cytoplasmic (By similarity).|ABC transmembrane type-1 1.				carbohydrate metabolic process|energy reserve metabolic process	integral to membrane	ATP binding|ATPase activity, coupled to transmembrane movement of substances|potassium ion transmembrane transporter activity|sulfonylurea receptor activity			ovary(1)	1				READ - Rectum adenocarcinoma(2;0.0325)|Colorectal(2;0.1)	Adenosine triphosphate(DB00171)|Glibenclamide(DB01016)|Gliclazide(DB01120)|Mitiglinide(DB01252)|Nateglinide(DB00731)|Repaglinide(DB00912)	TTCTCCCAGGCGTACAGCTTC	0.597			NA											25	32					7.33532e-06	9.16915e-06	0.003954	1	0
SERGEF	26297	broad.mit.edu	37	11	17981157	17981157	+	Nonsense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:17981157G>A	uc001mnm.2	-	9	951	c.871C>T	c.(871-873)CGA>TGA	p.R291*	SERGEF_uc009yhd.2_RNA|SERGEF_uc001mnn.2_Intron|SERGEF_uc010rcz.1_Intron|SERGEF_uc001mno.1_Nonsense_Mutation_p.R177*	NM_012139	NP_036271	Q9UGK8	SRGEF_HUMAN	deafness locus associated putative guanine	291	RCC1 6.				negative regulation of protein secretion|signal transduction	cytoplasm|nucleus	protein binding|Ran guanyl-nucleotide exchange factor activity			central_nervous_system(1)	1						TAGTCTGCTCGGCCCCAGGTA	0.428			NA											5	30					0	0	0.001168	0	0
HPS5	11234	broad.mit.edu	37	11	18306904	18306904	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:18306904G>A	uc001mod.1	-	20	3218	c.2940C>T	c.(2938-2940)TGC>TGT	p.C980C	HPS5_uc001moe.1_Silent_p.C866C|HPS5_uc001mof.1_Silent_p.C866C	NM_181507	NP_852608	Q9UPZ3	HPS5_HUMAN	Hermansky-Pudlak syndrome 5 isoform a	980						cytosol				ovary(1)|pancreas(1)|skin(1)	3						CACAAGACCTGCAGATGTCTG	0.348			NA							Hermansky-Pudlak_syndrome				21	9					0	0	0.001882	0	0
NELL1	4745	broad.mit.edu	37	11	21555938	21555938	+	Missense_Mutation	SNP	A	A	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:21555938A>C	uc001mqe.2	+	16	1817	c.1664A>C	c.(1663-1665)GAG>GCG	p.E555A	NELL1_uc001mqf.2_Intron|NELL1_uc009yid.2_Missense_Mutation_p.E583A|NELL1_uc010rdo.1_Missense_Mutation_p.E498A|NELL1_uc010rdp.1_Intron|NELL1_uc001mqh.2_Silent_p.R165R	NM_006157	NP_006148	Q92832	NELL1_HUMAN	nel-like 1 isoform 1 precursor	555	EGF-like 5; calcium-binding (Potential).				cell adhesion|nervous system development	extracellular region	calcium ion binding|structural molecule activity			ovary(2)|large_intestine(1)	3						GAATGTTCAGAGGGAATCATT	0.458			NA											12	45					0	0	0.00245	0	0
NAT10	55226	broad.mit.edu	37	11	34139802	34139802	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:34139802C>T	uc001mvk.2	+	7	877	c.633C>T	c.(631-633)TCC>TCT	p.S211S	NAT10_uc010ren.1_Silent_p.S139S	NM_024662	NP_078938	Q9H0A0	NAT10_HUMAN	N-acetyltransferase 10 isoform a	211						nucleolus	ATP binding|N-acetyltransferase activity|protein binding			ovary(1)|skin(1)	2		Acute lymphoblastic leukemia(5;0.0119)|all_hematologic(20;0.0231)				CCATCTCCTCCCACGTTGCCA	0.542			NA											32	34					0	0	0.00623	0	0
SPRYD5	84767	broad.mit.edu	37	11	55655715	55655715	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:55655715A>G	uc010rip.1	+	4	807	c.715A>G	c.(715-717)AAA>GAA	p.K239E	SPRYD5_uc010riq.1_Missense_Mutation_p.K96E	NM_032681	NP_116070	Q9BSJ1	SPRY5_HUMAN	SPRY domain containing 5	239						intracellular	zinc ion binding				0		all_epithelial(135;0.226)				AATGTGCCATAAAGCAGATGT	0.443			NA											13	14					0	0	0.003163	0	0
OR8K1	390157	broad.mit.edu	37	11	56113597	56113597	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:56113597G>A	uc010rjg.1	+	1	83	c.83G>A	c.(82-84)GGG>GAG	p.G28E		NM_001002907	NP_001002907	Q8NGG5	OR8K1_HUMAN	olfactory receptor, family 8, subfamily K,	28	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|pancreas(1)	2	Esophageal squamous(21;0.00448)					GACAACCCTGGGCTGCAGGCT	0.458			NA								HNSCC(65;0.19)			5	26					0	0	0.001168	0	0
OR5M10	390167	broad.mit.edu	37	11	56345063	56345063	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:56345063C>A	uc001niz.1	-	1	135	c.135G>T	c.(133-135)ATG>ATT	p.M45I		NM_001004741	NP_001004741	Q6IEU7	OR5MA_HUMAN	olfactory receptor, family 5, subfamily M,	45	Helical; Name=1; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0						TCAGCAGGATCATGCACAGGT	0.473			NA											44	17					1.03325e-14	1.52117e-14	0.002852	1	0
GIF	2694	broad.mit.edu	37	11	59603316	59603316	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:59603316G>T	uc001noi.2	-	7	1086	c.1038C>A	c.(1036-1038)GTC>GTA	p.V346V		NM_005142	NP_005133	P27352	IF_HUMAN	gastric intrinsic factor (vitamin B synthesis)	346					cobalamin metabolic process|cobalamin transport|cobalt ion transport	apical plasma membrane|endosome|extracellular space|microvillus	cobalamin binding			ovary(1)|liver(1)	2						CTTCCTCTAGGACAACAAGTA	0.413	NSCLC(53;1139 1245 16872 38474 42853)		NA											41	54					3.05275e-18	4.67617e-18	0.003214	1	0
USP35	57558	broad.mit.edu	37	11	77911202	77911202	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:77911202C>T	uc009yva.1	+	5	1206	c.960C>T	c.(958-960)CCC>CCT	p.P320P	USP35_uc001oze.2_Silent_p.P76P|USP35_uc001ozc.2_Intron|USP35_uc010rsp.1_Intron|USP35_uc001ozd.2_5'UTR|USP35_uc001ozf.2_Silent_p.P51P	NM_020798	NP_065849	Q9P2H5	UBP35_HUMAN	ubiquitin specific protease 35	320					ubiquitin-dependent protein catabolic process		binding|cysteine-type peptidase activity|ubiquitin thiolesterase activity			lung(2)|ovary(1)	3	all_cancers(14;3.77e-18)|all_epithelial(13;6.16e-21)|Breast(9;5.6e-16)|Ovarian(111;0.152)		OV - Ovarian serous cystadenocarcinoma(8;1.04e-25)			TGCTGTACCCCATCGTCCGGG	0.582			NA											15	118					0	0	0.004007	0	0
AMOTL1	154810	broad.mit.edu	37	11	94533394	94533394	+	Silent	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:94533394C>G	uc001pfb.2	+	3	1208	c.1038C>G	c.(1036-1038)GTC>GTG	p.V346V	AMOTL1_uc001pfc.2_Silent_p.V296V	NM_130847	NP_570899	Q8IY63	AMOL1_HUMAN	angiomotin like 1	346						cytoplasm|tight junction	identical protein binding			ovary(1)|breast(1)	2		Acute lymphoblastic leukemia(157;2.38e-05)|all_hematologic(158;0.00824)				ACGAGATGGTCAAGCCCTACC	0.567			NA											27	190					0	0	0.007291	0	0
AMOTL1	154810	broad.mit.edu	37	11	94533413	94533413	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:94533413C>G	uc001pfb.2	+	3	1227	c.1057C>G	c.(1057-1059)CAG>GAG	p.Q353E	AMOTL1_uc001pfc.2_Missense_Mutation_p.Q303E	NM_130847	NP_570899	Q8IY63	AMOL1_HUMAN	angiomotin like 1	353						cytoplasm|tight junction	identical protein binding			ovary(1)|breast(1)	2		Acute lymphoblastic leukemia(157;2.38e-05)|all_hematologic(158;0.00824)				CCCTGCTCCTCAGCCTGTGAG	0.567			NA											24	176					0	0	0.00333	0	0
EXPH5	23086	broad.mit.edu	37	11	108384059	108384059	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:108384059T>A	uc001pkk.2	-	6	2286	c.2175A>T	c.(2173-2175)GAA>GAT	p.E725D	EXPH5_uc010rvy.1_Missense_Mutation_p.E537D|EXPH5_uc010rvz.1_Missense_Mutation_p.E569D|EXPH5_uc010rwa.1_Missense_Mutation_p.E649D	NM_015065	NP_055880	Q8NEV8	EXPH5_HUMAN	exophilin 5 isoform a	725					intracellular protein transport		Rab GTPase binding			skin(3)|ovary(2)	5		all_cancers(61;3.99e-08)|Acute lymphoblastic leukemia(157;3.97e-05)|Melanoma(852;4.04e-05)|all_epithelial(67;0.000116)|all_hematologic(158;0.000315)|Breast(348;0.104)|all_neural(303;0.16)		Epithelial(105;8.1e-06)|BRCA - Breast invasive adenocarcinoma(274;1.22e-05)|all cancers(92;0.000129)|OV - Ovarian serous cystadenocarcinoma(223;0.11)|Colorectal(284;0.184)		GTTGGGGTATTTCACCTGCCT	0.403			NA											7	62					0	0	0.001984	0	0
GRAMD1B	57476	broad.mit.edu	37	11	123485517	123485517	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr11:123485517C>A	uc001pyx.2	+	16	2192	c.1863C>A	c.(1861-1863)TCC>TCA	p.S621S	GRAMD1B_uc001pyw.2_Silent_p.S628S|GRAMD1B_uc010rzw.1_Silent_p.S581S|GRAMD1B_uc010rzx.1_Silent_p.S581S|GRAMD1B_uc001pyy.2_Silent_p.S312S	NM_020716	NP_065767	Q3KR37	GRM1B_HUMAN	GRAM domain containing 1B	621						integral to membrane				ovary(1)	1		Breast(109;0.00204)|Lung NSC(97;0.0177)|all_lung(97;0.0179)|Medulloblastoma(222;0.0425)|all_neural(223;0.112)		BRCA - Breast invasive adenocarcinoma(274;7.32e-06)|OV - Ovarian serous cystadenocarcinoma(99;0.0394)		AGAGCGTGTCCAAGCTGCTGC	0.567			NA											10	3					1.76689e-08	2.3529e-08	0.006214	1	0
ITFG2	55846	broad.mit.edu	37	12	2930756	2930756	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:2930756C>G	uc001qlb.1	+	8	905	c.841C>G	c.(841-843)CTG>GTG	p.L281V	ITFG2_uc010seb.1_Missense_Mutation_p.L104V|ITFG2_uc010sec.1_RNA	NM_018463	NP_060933	Q969R8	ITFG2_HUMAN	integrin alpha FG-GAP repeat containing 2	281											0			OV - Ovarian serous cystadenocarcinoma(31;0.000818)			CCTGTGCACCCTGGATGGTGA	0.612			NA											33	65					0	0	0.003755	0	0
ITFG2	55846	broad.mit.edu	37	12	2930955	2930955	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:2930955C>T	uc001qlb.1	+	9	1009	c.945C>T	c.(943-945)GTC>GTT	p.V315V	ITFG2_uc010seb.1_Silent_p.V138V|ITFG2_uc010sec.1_RNA	NM_018463	NP_060933	Q969R8	ITFG2_HUMAN	integrin alpha FG-GAP repeat containing 2	315											0			OV - Ovarian serous cystadenocarcinoma(31;0.000818)			AACTGGATGTCACCGTGAGTG	0.502			NA											48	78					0	0	0.00361	0	0
TEAD4	7004	broad.mit.edu	37	12	3129844	3129844	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:3129844C>T	uc010sej.1	+	9	902	c.625C>T	c.(625-627)CCG>TCG	p.P209S	TEAD4_uc010sek.1_Missense_Mutation_p.P166S|TEAD4_uc001qln.2_Missense_Mutation_p.P81S	NM_003213	NP_003204	Q15561	TEAD4_HUMAN	TEA domain family member 4 isoform 1	210					hippo signaling cascade|muscle organ development|skeletal system development		DNA binding|protein binding|sequence-specific DNA binding transcription factor activity				0	Ovarian(42;0.211)		OV - Ovarian serous cystadenocarcinoma(31;0.000563)|COAD - Colon adenocarcinoma(12;0.0831)			CTCTGCGCCCCCGGCACCCCC	0.672			NA											39	24					0	0	0.00623	0	0
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A	rs121913529		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:25398284C>A	uc001rgp.1	-	2	216	c.35G>T	c.(34-36)GGT>GTT	p.G12V	KRAS_uc001rgq.1_Missense_Mutation_p.G12V|KRAS_uc001rgr.2_RNA	NM_033360	NP_203524	P01116	RASK_HUMAN	c-K-ras2 protein isoform a precursor	12	GTP.		G -> D (in pancreatic carcinoma, GASC and lung carcinoma; somatic mutation).|G -> R (in lung cancer and bladder cancer; somatic mutation).|G -> S (in lung carcinoma and GASC; somatic mutation).|G -> A (in a colorectal cancer sample; somatic mutation).|G -> C (in lung carcinoma; somatic mutation).|G -> V (in lung carcinoma, pancreatic carcinoma, colon cancer and GASC; somatic mutation).		activation of MAPKK activity|axon guidance|blood coagulation|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|nerve growth factor receptor signaling pathway|Ras protein signal transduction	plasma membrane	GTP binding|GTPase activity|protein binding	p.G12D(7175)|p.G12V(4780)|p.G12C(2482)|p.G12A(1180)|p.G12S(1119)|p.G12R(691)|p.G12?(50)|p.G12F(34)|p.G12N(6)|p.G12G(6)|p.G12L(5)|p.G12I(4)|p.G12_G13insG(4)|p.G12E(3)|p.G12W(3)|p.A11_G12insGA(2)|p.G12Y(2)|p.G12fs*3(1)		large_intestine(12391)|pancreas(3285)|lung(2847)|biliary_tract(521)|ovary(443)|endometrium(339)|haematopoietic_and_lymphoid_tissue(318)|stomach(203)|thyroid(149)|prostate(85)|soft_tissue(77)|small_intestine(62)|upper_aerodigestive_tract(59)|cervix(49)|urinary_tract(48)|skin(38)|liver(31)|breast(28)|testis(17)|oesophagus(15)|central_nervous_system(9)|peritoneum(6)|salivary_gland(6)|kidney(5)|gastrointestinal_tract_(site_indeterminate)(5)|thymus(5)|eye(4)|autonomic_ganglia(2)|bone(2)|genital_tract(1)|penis(1)|adrenal_gland(1)	21052	all_cancers(2;1e-35)|all_epithelial(2;1.97e-38)|all_lung(3;2.1e-23)|Lung NSC(3;1.16e-22)|Acute lymphoblastic leukemia(6;0.00231)|all_hematologic(7;0.00259)|Melanoma(3;0.0301)|Colorectal(261;0.11)|Ovarian(17;0.12)		OV - Ovarian serous cystadenocarcinoma(3;1.23e-21)|Epithelial(3;1.31e-20)|all cancers(3;5.45e-18)|STAD - Stomach adenocarcinoma(2;2.68e-05)			GCCTACGCCACCAGCTCCAAC	0.348	Pancreas(8;6 143 191 305 2070 2426 4376 10944 11745 26467 38091 50869)	G12D(HPAC_PANCREAS)|G12V(SW403_LARGE_INTESTINE)|G12D(HPAFII_PANCREAS)|G12D(PANC0403_PANCREAS)|G12D(KOPN8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12A(KMS28BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12V(NCIH441_LUNG)|G12D(SU8686_PANCREAS)|G12D(SUIT2_PANCREAS)|G12D(PK1_PANCREAS)|G12V(KP3_PANCREAS)|G12D(PANC0813_PANCREAS)|G12A(SW1116_LARGE_INTESTINE)|G12D(LS180_LARGE_INTESTINE)|G12V(NCIH727_LUNG)|G12V(PATU8988S_PANCREAS)|G12V(CAPAN2_PANCREAS)|G12D(KP4_PANCREAS)|G12D(LS513_LARGE_INTESTINE)|G12D(SNUC2A_LARGE_INTESTINE)|G12V(SW480_LARGE_INTESTINE)|G12V(COLO668_LUNG)|G12D(COLO678_LARGE_INTESTINE)|G12V(RERFLCAD2_LUNG)|G12D(PANC0203_PANCREAS)|G12V(CFPAC1_PANCREAS)|G12V(SW900_LUNG)|G12V(LCLC97TM1_LUNG)|G12V(SW620_LARGE_INTESTINE)|G12A(MM1S_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12V(SH10TC_STOMACH)|G12V(A498_KIDNEY)|G12D(PK59_PANCREAS)|G12D(HEC1A_ENDOMETRIUM)|G12D(PANC0504_PANCREAS)|G12V(SNGM_ENDOMETRIUM)|G12A(RERFLCAD1_LUNG)|G12A(KPNSI9S_AUTONOMIC_GANGLIA)|G12D(ASPC1_PANCREAS)|G12A(RPMI8226_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12V(RCM1_LARGE_INTESTINE)|G12V(CORL23_LUNG)|G12D(SW1990_PANCREAS)|G12D(HEYA8_OVARY)|G12A(NCIH1573_LUNG)|G12A(NCIH2009_LUNG)|G12V(HUPT4_PANCREAS)|G12D(KARPAS620_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|G12D(HEC50B_ENDOMETRIUM)|G12V(YAPC_PANCREAS)|G12V(NCIH2444_LUNG)|G12V(HCC56_LARGE_INTESTINE)|G12D(MCAS_OVARY)|G12V(DANG_PANCREAS)|G12V(SHP77_LUNG)|G12D(AGS_STOMACH)|G12D(SKLU1_LUNG)|G12V(QGP1_PANCREAS)|G12D(L33_PANCREAS)|G12V(PANC0327_PANCREAS)|G12D(PANC1_PANCREAS)|G12V(RKN_OVARY)|G12V(PATU8902_PANCREAS)	119	Mis		pancreatic|colorectal|lung|thyroid|AML|others				Cardiofaciocutaneous_syndrome|Noonan_syndrome	TSP Lung(1;<1E-08)|Multiple Myeloma(2;<1E-6)			5	7					8.12818e-05	9.44723e-05	0.001984	1	0
ADAMTS20	80070	broad.mit.edu	37	12	43846406	43846406	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:43846406C>A	uc010skx.1	-	13	1853	c.1853G>T	c.(1852-1854)CGA>CTA	p.R618L		NM_025003	NP_079279	P59510	ATS20_HUMAN	a disintegrin-like and metalloprotease with	618	Cys-rich.					proteinaceous extracellular matrix	zinc ion binding			central_nervous_system(5)|ovary(4)|lung(3)|large_intestine(2)|skin(2)|urinary_tract(1)|kidney(1)|pancreas(1)	19	all_cancers(12;2.6e-05)|Lung SC(27;0.184)	Lung NSC(34;0.0569)|all_lung(34;0.129)		GBM - Glioblastoma multiforme(48;0.0473)		CTGCTTCTCTCGAAAGTCTTG	0.423			NA											15	22					1.49906e-05	1.82225e-05	0.00245	1	0
COL2A1	1280	broad.mit.edu	37	12	48369227	48369227	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:48369227G>A	uc001rqu.2	-	51	3940	c.3759C>T	c.(3757-3759)GCC>GCT	p.A1253A	COL2A1_uc001rqt.2_Silent_p.A34A|COL2A1_uc009zkw.2_RNA|COL2A1_uc001rqv.2_Silent_p.A1184A	NM_001844	NP_001835	P02458	CO2A1_HUMAN	collagen, type II, alpha 1 isoform 1 precursor	1253	Fibrillar collagen NC1.				axon guidance|collagen fibril organization|embryonic skeletal joint morphogenesis|sensory perception of sound|visual perception	collagen type II	identical protein binding|platelet-derived growth factor binding			ovary(1)|skin(1)	2		Acute lymphoblastic leukemia(13;0.108)|all_hematologic(14;0.214)			Collagenase(DB00048)	CATCCACCTCGGCGTCATGCT	0.647			NA											17	74					0	0	0.001523	0	0
KRT79	338785	broad.mit.edu	37	12	53216924	53216924	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:53216924G>T	uc001sbb.2	-	7	1276	c.1243C>A	c.(1243-1245)CTG>ATG	p.L415M	KRT79_uc001sba.2_Missense_Mutation_p.L186M	NM_175834	NP_787028	Q5XKE5	K2C79_HUMAN	keratin 6L	415	Rod.|Coil 2.					keratin filament	structural molecule activity			ovary(2)|skin(2)	4						GCCTGGTGCAGGGCCACATCC	0.612			NA											30	36					1.7881e-09	2.42998e-09	0.008361	1	0
KIF5A	3798	broad.mit.edu	37	12	57969439	57969439	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:57969439G>T	uc001sor.1	+	17	2130	c.1922G>T	c.(1921-1923)CGC>CTC	p.R641L	KIF5A_uc010srr.1_Missense_Mutation_p.R552L	NM_004984	NP_004975	Q12840	KIF5A_HUMAN	kinesin family member 5A	641					blood coagulation|cell death|microtubule-based movement|synaptic transmission	cytosol|kinesin complex|membrane fraction|microtubule|perinuclear region of cytoplasm	ATP binding|microtubule motor activity			ovary(2)|skin(1)	3						GCCAAGATCCGCTCGCTTACG	0.557			NA											25	141					1.36565e-18	2.10405e-18	0.00278	1	0
BEST3	144453	broad.mit.edu	37	12	70087509	70087509	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:70087509C>T	uc001svg.2	-	4	653	c.426G>A	c.(424-426)TCG>TCA	p.S142S	BEST3_uc001svd.1_Silent_p.S142S|BEST3_uc001sve.1_RNA|BEST3_uc010stm.1_Silent_p.S36S|BEST3_uc001svh.2_5'UTR|BEST3_uc001svi.1_RNA	NM_032735	NP_116124	Q8N1M1	BEST3_HUMAN	vitelliform macular dystrophy 2-like 3 isoform	142	Cytoplasmic (Potential).					chloride channel complex|plasma membrane	chloride channel activity				0	Breast(13;2.31e-06)|Esophageal squamous(21;0.187)		Lung(24;0.000278)|OV - Ovarian serous cystadenocarcinoma(12;0.0019)|STAD - Stomach adenocarcinoma(21;0.00694)			CAGTGCTCACCGAGCGAAAGA	0.527			NA											5	48					0	0	0.001984	0	0
ZMYM5	9205	broad.mit.edu	37	13	20426052	20426052	+	Missense_Mutation	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr13:20426052T>C	uc010tcn.1	-	3	534	c.269A>G	c.(268-270)GAA>GGA	p.E90G	ZMYM5_uc001umm.1_5'UTR|ZMYM5_uc001umn.2_Missense_Mutation_p.E90G|ZMYM5_uc001umo.2_Missense_Mutation_p.E90G	NM_001142684	NP_001136156	Q9UJ78	ZMYM5_HUMAN	zinc finger protein 237 isoform 3	90						nucleus	zinc ion binding				0		all_cancers(29;2.96e-22)|all_epithelial(30;3.76e-20)|all_lung(29;4.38e-20)|Lung NSC(5;5.8e-17)|Lung SC(185;0.0262)|Ovarian(182;0.162)		all cancers(112;1.61e-05)|Epithelial(112;4.89e-05)|OV - Ovarian serous cystadenocarcinoma(117;0.00171)|Lung(94;0.00942)|LUSC - Lung squamous cell carcinoma(192;0.0431)		TTGAGGCTTTTCATTTTTTGA	0.313			NA											10	19					0	0	0.006214	0	0
PCDH8	5100	broad.mit.edu	37	13	53421573	53421573	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr13:53421573G>T	uc001vhi.2	-	1	1202	c.999C>A	c.(997-999)CCC>CCA	p.P333P	PCDH8_uc001vhj.2_Silent_p.P333P	NM_002590	NP_002581	O95206	PCDH8_HUMAN	protocadherin 8 isoform 1 precursor	333	Extracellular (Potential).|Cadherin 3.				cell-cell signaling|homophilic cell adhesion	cell junction|dendrite|integral to plasma membrane|postsynaptic membrane|presynaptic membrane	calcium ion binding			breast(1)	1		Lung NSC(96;0.0019)|Breast(56;0.00235)|Hepatocellular(98;0.065)|Prostate(109;0.0771)|all_neural(104;0.173)		GBM - Glioblastoma multiforme(99;2.19e-08)		TGGCAGCGCGGGGCCCGGGTC	0.721	GBM(36;25 841 9273 49207)		NA											13	10					3.41278e-10	4.66179e-10	0.00499	1	0
DOCK9	23348	broad.mit.edu	37	13	99489762	99489762	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr13:99489762T>G	uc001vnt.2	-	39	4289	c.4234A>C	c.(4234-4236)ACA>CCA	p.T1412P	DOCK9_uc001vnw.2_Missense_Mutation_p.T1411P|DOCK9_uc001vnv.1_RNA|DOCK9_uc010tir.1_Missense_Mutation_p.T1412P|DOCK9_uc001vnq.2_5'UTR|DOCK9_uc001vnr.2_Missense_Mutation_p.T55P|DOCK9_uc010tin.1_Missense_Mutation_p.T55P|DOCK9_uc001vns.2_5'UTR|DOCK9_uc010tio.1_Missense_Mutation_p.T104P|DOCK9_uc010tip.1_Missense_Mutation_p.T122P|DOCK9_uc001vnu.1_5'UTR|DOCK9_uc010tiq.1_Missense_Mutation_p.T390P	NM_015296	NP_056111	Q9BZ29	DOCK9_HUMAN	dedicator of cytokinesis 9 isoform a	1412					blood coagulation	cytosol|endomembrane system|membrane	GTP binding|GTPase binding|guanyl-nucleotide exchange factor activity			central_nervous_system(1)	1	all_neural(89;0.101)|Medulloblastoma(90;0.18)|Lung SC(71;0.184)					AACGCCAATGTAAATAGAGAA	0.433			NA											8	13					0	0	0.004482	0	0
TMTC4	84899	broad.mit.edu	37	13	101277801	101277801	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr13:101277801G>C	uc001vou.2	-	14	1927	c.1767C>G	c.(1765-1767)AAC>AAG	p.N589K	TMTC4_uc001vot.2_Missense_Mutation_p.N608K|TMTC4_uc010tja.1_Missense_Mutation_p.N478K|TMTC4_uc001vov.1_Missense_Mutation_p.N334K|TMTC4_uc001vow.1_Missense_Mutation_p.N372K	NM_001079669	NP_001073137	Q5T4D3	TMTC4_HUMAN	transmembrane and tetratricopeptide repeat	589	TPR 5.					integral to membrane	binding			ovary(2)|breast(1)	3	all_neural(89;0.0837)|Medulloblastoma(90;0.18)|Lung SC(71;0.184)					GACGCCCGAGGTTGTAGTAAC	0.458			NA											22	26					0	0	0.003954	0	0
POTEG	404785	broad.mit.edu	37	14	19553788	19553788	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:19553788C>T	uc001vuz.1	+	1	424	c.372C>T	c.(370-372)GAC>GAT	p.D124D	POTEG_uc001vva.1_RNA|POTEG_uc010ahc.1_RNA	NM_001005356	NP_001005356	Q6S5H5	POTEG_HUMAN	POTE ankyrin domain family, member G	124										ovary(1)	1						GAGACTACGACGACAGCGCTT	0.592			NA											64	575					0	0	0.00361	0	0
OR4N2	390429	broad.mit.edu	37	14	20295901	20295901	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:20295901C>A	uc010tkv.1	+	1	294	c.294C>A	c.(292-294)ATC>ATA	p.I98I		NM_001004723	NP_001004723	Q8NGD1	OR4N2_HUMAN	olfactory receptor, family 4, subfamily N,	98	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(2)|central_nervous_system(1)|skin(1)	4	all_cancers(95;0.00108)		Epithelial(56;9.96e-07)|all cancers(55;2.95e-06)	GBM - Glioblastoma multiforme(265;0.00327)		GAGGCTGCATCACTCAGCTCT	0.532			NA											111	61					4.58075e-42	7.73183e-42	0.00361	1	0
FRMD6	122786	broad.mit.edu	37	14	52169297	52169297	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:52169297G>C	uc001wzd.2	+	5	647	c.362G>C	c.(361-363)AGA>ACA	p.R121T	FRMD6_uc001wzb.2_Missense_Mutation_p.R113T|FRMD6_uc001wzc.2_Missense_Mutation_p.R113T|FRMD6_uc001wze.2_Missense_Mutation_p.R44T	NM_152330	NP_689543	Q96NE9	FRMD6_HUMAN	FERM domain containing 6	121	FERM.					cytoskeleton|mitochondrion|plasma membrane	binding			ovary(1)|breast(1)|central_nervous_system(1)	3	all_epithelial(31;0.0163)|Breast(41;0.089)					GAAAATGGCAGATTGATCAGG	0.299			NA											49	178					0	0	0.00361	0	0
KIAA0586	9786	broad.mit.edu	37	14	58965518	58965518	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:58965518G>T	uc001xdv.3	+	26	4053	c.3780G>T	c.(3778-3780)GTG>GTT	p.V1260V	KIAA0586_uc010trr.1_Silent_p.V1377V|KIAA0586_uc001xdt.3_Silent_p.V1292V|KIAA0586_uc001xdu.3_Silent_p.V1321V|KIAA0586_uc010trs.1_Silent_p.V1251V|KIAA0586_uc010trt.1_Silent_p.V1196V	NM_014749	NP_055564	E9PGW8	E9PGW8_HUMAN	talpid3 protein	1260										ovary(1)	1						AAAACAGTGTGGGTGAACTTA	0.378			NA											9	18					3.86212e-05	4.58951e-05	0.008291	1	0
SLC8A3	6547	broad.mit.edu	37	14	70634240	70634240	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:70634240G>C	uc001xly.2	-	2	1654	c.900C>G	c.(898-900)AAC>AAG	p.N300K	SLC8A3_uc001xlw.2_Missense_Mutation_p.N300K|SLC8A3_uc001xlx.2_Missense_Mutation_p.N300K|SLC8A3_uc001xlz.2_Missense_Mutation_p.N300K|SLC8A3_uc010ara.2_RNA	NM_183002	NP_892114	P57103	NAC3_HUMAN	solute carrier family 8 (sodium/calcium	300	Cytoplasmic (Potential).				cell communication|platelet activation	integral to membrane|plasma membrane	calcium:sodium antiporter activity|calmodulin binding			skin(3)|ovary(2)|breast(2)	7				BRCA - Breast invasive adenocarcinoma(234;0.0079)|all cancers(60;0.0102)|OV - Ovarian serous cystadenocarcinoma(108;0.0555)		GGGGCACCAGGTTCCCATCTA	0.483			NA											24	52					0	0	0.005443	0	0
HHIPL1	84439	broad.mit.edu	37	14	100129272	100129272	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:100129272G>A	uc010avs.2	+	6	1627	c.1562G>A	c.(1561-1563)TGC>TAC	p.C521Y	HHIPL1_uc001ygl.1_Missense_Mutation_p.C521Y	NM_001127258	NP_001120730	Q96JK4	HIPL1_HUMAN	HHIP-like protein 1 isoform a	521					carbohydrate metabolic process	extracellular region|membrane	oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor|quinone binding|scavenger receptor activity			skin(2)	2		Melanoma(154;0.128)				AGTGAGATCTGCATGGGCCAC	0.592			NA											6	56					0	0	0.001168	0	0
CINP	51550	broad.mit.edu	37	14	102822165	102822165	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:102822165C>A	uc001ylv.1	-	3	311	c.246G>T	c.(244-246)CTG>CTT	p.L82L	CINP_uc001ylu.1_RNA	NM_032630	NP_116019	Q9BW66	CINP_HUMAN	cyclin-dependent kinase 2-interacting protein	82	Potential.				cell cycle|cell division|DNA repair|DNA replication	nucleus	protein binding			large_intestine(1)	1						CGTTATATTCCAGACACACCT	0.438			NA											58	39					1.87854e-15	2.79671e-15	0.00361	1	0
KLC1	3831	broad.mit.edu	37	14	104129247	104129247	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:104129247C>T	uc001yno.2	+	5	1088	c.780C>T	c.(778-780)ATC>ATT	p.I260I	KLC1_uc010tyd.1_Silent_p.I419I|KLC1_uc010tye.1_Silent_p.I256I|KLC1_uc001ynm.1_Silent_p.I260I|KLC1_uc001ynn.1_Silent_p.I256I|KLC1_uc010tyf.1_Silent_p.I260I	NM_182923	NP_891553	Q07866	KLC1_HUMAN	kinesin light chain 1 isoform 2	260	TPR 2.				blood coagulation|microtubule-based movement|stress granule disassembly	cytosol|kinesin complex|microtubule	microtubule motor activity|protein binding				0		Melanoma(154;0.155)|all_epithelial(191;0.19)				TGCTCAACATCCTGGCCTTGG	0.493			NA											5	30					0	0	0.000602	0	0
PPP1R13B	23368	broad.mit.edu	37	14	104206652	104206652	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr14:104206652C>T	uc001yof.1	-	12	2384	c.2101G>A	c.(2101-2103)GCG>ACG	p.A701T	PPP1R13B_uc010awv.1_RNA|PPP1R13B_uc001yog.1_Missense_Mutation_p.A568T	NM_015316	NP_056131	Q96KQ4	ASPP1_HUMAN	apoptosis-stimulating protein of p53, 1	701	Pro-rich.				apoptosis|induction of apoptosis|negative regulation of cell cycle	cytoplasm|nucleus|plasma membrane	protein binding			ovary(1)	1		all_cancers(154;0.173)|all_epithelial(191;0.131)|Melanoma(154;0.155)				GGCCGGGGCGCGTTGGCCAGC	0.667			NA											7	133					0	0	0.001984	0	0
C15orf2	23742	broad.mit.edu	37	15	24921213	24921213	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr15:24921213G>T	uc001ywo.2	+	1	673	c.199G>T	c.(199-201)GCC>TCC	p.A67S		NM_018958	NP_061831	Q9NZP6	CO002_HUMAN	hypothetical protein LOC23742	67					cell differentiation|multicellular organismal development|spermatogenesis					ovary(2)|large_intestine(2)|skin(2)|kidney(1)|central_nervous_system(1)	8		all_cancers(20;2.14e-21)|all_epithelial(15;4.77e-19)|Lung NSC(15;1.43e-14)|all_lung(15;9.57e-14)|Breast(32;0.00086)		all cancers(64;3.19e-24)|Epithelial(43;2.67e-17)|GBM - Glioblastoma multiforme(186;7.36e-07)|BRCA - Breast invasive adenocarcinoma(123;0.000273)|Lung(196;0.229)		CATCTTCGTCGCCCCTAAGAG	0.716			NA											16	36					5.01169e-05	5.90266e-05	0.00499	1	0
PLCB2	5330	broad.mit.edu	37	15	40586571	40586571	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr15:40586571C>A	uc001zld.2	-	19	2258	c.1957G>T	c.(1957-1959)GGC>TGC	p.G653C	PLCB2_uc010bbo.2_Missense_Mutation_p.G649C|PLCB2_uc010ucm.1_Missense_Mutation_p.G653C	NM_004573	NP_004564	Q00722	PLCB2_HUMAN	phospholipase C, beta 2	653	PI-PLC Y-box.				activation of phospholipase C activity|intracellular signal transduction|lipid catabolic process|phospholipid metabolic process|synaptic transmission	cytosol	calcium ion binding|phosphatidylinositol phospholipase C activity|signal transducer activity			ovary(3)|breast(3)|kidney(1)|pancreas(1)	8		all_cancers(109;9.35e-19)|all_epithelial(112;1.18e-15)|Lung NSC(122;2.45e-11)|all_lung(180;6.47e-10)|Melanoma(134;0.0574)|Ovarian(310;0.0822)|Colorectal(260;0.117)		GBM - Glioblastoma multiforme(113;9.38e-06)|BRCA - Breast invasive adenocarcinoma(123;0.0508)		AGGAGGTAGCCGCTCTGCCCG	0.597			NA											7	33					0.00198382	0.00222759	0.001984	1	0
ADAL	161823	broad.mit.edu	37	15	43632517	43632517	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr15:43632517C>A	uc010udo.1	+	7	884	c.310C>A	c.(310-312)CTA>ATA	p.L104I	ADAL_uc001zrh.2_Missense_Mutation_p.L104I|ADAL_uc001zri.1_5'UTR	NM_001159280	NP_001152752	Q6DHV7	ADAL_HUMAN	adenosine deaminase-like isoform 1	104					adenosine catabolic process|inosine biosynthetic process|purine ribonucleoside monophosphate biosynthetic process		adenosine deaminase activity|metal ion binding				0		all_cancers(109;7.96e-11)|all_epithelial(112;2.96e-09)|Lung NSC(122;8.91e-07)|all_lung(180;8.8e-06)|Melanoma(134;0.0728)		GBM - Glioblastoma multiforme(94;9.31e-07)		GTACCTGGAACTAAGGAGCAC	0.373			NA											16	30					7.07596e-05	8.29703e-05	0.006122	1	0
HDC	3067	broad.mit.edu	37	15	50545802	50545802	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr15:50545802G>T	uc001zxz.2	-	7	888	c.782C>A	c.(781-783)CCC>CAC	p.P261H	HDC_uc001zxy.2_5'Flank|HDC_uc010uff.1_Missense_Mutation_p.P261H|HDC_uc010bet.1_Missense_Mutation_p.P182H	NM_002112	NP_002103	P19113	DCHS_HUMAN	histidine decarboxylase	261					catecholamine biosynthetic process|histidine metabolic process		histidine decarboxylase activity			large_intestine(2)|skin(2)|upper_aerodigestive_tract(1)|central_nervous_system(1)	6		all_lung(180;0.0138)		all cancers(107;1.12e-06)|GBM - Glioblastoma multiforme(94;9.95e-05)	L-Histidine(DB00117)|Pyridoxal Phosphate(DB00114)	CTTACAGATGGGGCCCAGCTC	0.478	GBM(95;1627 1936 6910 9570)		NA											24	40					2.50493e-22	3.97489e-22	0.004656	1	0
CYP1A2	1544	broad.mit.edu	37	15	75045584	75045584	+	Missense_Mutation	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr15:75045584T>C	uc002ayr.1	+	6	1290	c.1226T>C	c.(1225-1227)GTA>GCA	p.V409A		NM_000761	NP_000752	P05177	CP1A2_HUMAN	cytochrome P450, family 1, subfamily A,	409					alkaloid metabolic process|exogenous drug catabolic process|methylation|monocarboxylic acid metabolic process|monoterpenoid metabolic process|oxidative deethylation|oxidative demethylation|steroid catabolic process|toxin biosynthetic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	aromatase activity|caffeine oxidase activity|demethylase activity|electron carrier activity|enzyme binding|heme binding|oxygen binding			ovary(3)|breast(1)	4					Acenocoumarol(DB01418)|Acetaminophen(DB00316)|Aciclovir(DB00787)|Alosetron(DB00969)|Aminophenazone(DB01424)|Amitriptyline(DB00321)|Anagrelide(DB00261)|Azelastine(DB00972)|Bortezomib(DB00188)|Caffeine(DB00201)|Carmustine(DB00262)|Chlordiazepoxide(DB00475)|Chlorpromazine(DB00477)|Chlorzoxazone(DB00356)|Cimetidine(DB00501)|Cinacalcet(DB01012)|Ciprofloxacin(DB00537)|Clomipramine(DB01242)|Clotrimazole(DB00257)|Clozapine(DB00363)|Conjugated Estrogens(DB00286)|Cyclobenzaprine(DB00924)|Dacarbazine(DB00851)|Desloratadine(DB00967)|Diazepam(DB00829)|Dibucaine(DB00527)|Diclofenac(DB00586)|Duloxetine(DB00476)|Enoxacin(DB00467)|Esomeprazole(DB00736)|Estradiol(DB00783)|Estrone(DB00655)|Fluorouracil(DB00544)|Flutamide(DB00499)|Fluvoxamine(DB00176)|Frovatriptan(DB00998)|Grepafloxacin(DB00365)|Haloperidol(DB00502)|Hesperetin(DB01094)|Imipramine(DB00458)|Ketoconazole(DB01026)|Leflunomide(DB01097)|Levobupivacaine(DB01002)|Levofloxacin(DB01137)|Lidocaine(DB00281)|Lomefloxacin(DB00978)|Melatonin(DB01065)|Mephenytoin(DB00532)|Mexiletine(DB00379)|Mirtazapine(DB00370)|Norfloxacin(DB01059)|Nortriptyline(DB00540)|Ofloxacin(DB01165)|Olanzapine(DB00334)|Ondansetron(DB00904)|Palonosetron(DB00377)|Pantoprazole(DB00213)|Pefloxacin(DB00487)|Pimozide(DB01100)|Propafenone(DB01182)|Propranolol(DB00571)|Quinidine(DB00908)|Ramelteon(DB00980)|Ranitidine(DB00863)|Rasagiline(DB01367)|Rifampin(DB01045)|Riluzole(DB00740)|Rofecoxib(DB00533)|Ropinirole(DB00268)|Ropivacaine(DB00296)|Tacrine(DB00382)|Telithromycin(DB00976)|Terfenadine(DB00342)|Theophylline(DB00277)|Thiabendazole(DB00730)|Tizanidine(DB00697)|Tolbutamide(DB01124)|Verapamil(DB00661)|Warfarin(DB00682)|Zileuton(DB00744)|Zolmitriptan(DB00315)	TGTGTCTTCGTAAACCAGTGG	0.522			NA											3	29					0	0	0.004672	0	0
MMP25	64386	broad.mit.edu	37	16	3107375	3107375	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr16:3107375C>T	uc002cth.2	+	6	1140	c.903C>T	c.(901-903)CCC>CCT	p.P301P	uc002ctj.1_Intron	NM_022468	NP_071913	Q9NPA2	MMP25_HUMAN	matrix metalloproteinase 25 preproprotein	301					inflammatory response|proteolysis	anchored to membrane|cell surface|plasma membrane|proteinaceous extracellular matrix	calcium ion binding|metalloendopeptidase activity|zinc ion binding				0						CGCCCCAGCCCCCGGCCTCGC	0.652	NSCLC(147;665 1067 3888 6863 19894 30469 40247 45633 51336)		NA											4	89					0	0	0.000602	0	0
CYLD	1540	broad.mit.edu	37	16	50830353	50830353	+	Silent	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr16:50830353A>G	uc002egp.1	+	19	3220	c.2805A>G	c.(2803-2805)GCA>GCG	p.A935A	CYLD_uc002egq.1_Silent_p.A932A|CYLD_uc002egr.1_Silent_p.A932A	NM_015247	NP_056062	Q9NQC7	CYLD_HUMAN	ubiquitin carboxyl-terminal hydrolase CYLD	935					cell cycle|negative regulation of canonical Wnt receptor signaling pathway|negative regulation of NF-kappaB import into nucleus|negative regulation of NF-kappaB transcription factor activity|negative regulation of type I interferon production|protein K63-linked deubiquitination|regulation of microtubule cytoskeleton organization|regulation of mitotic cell cycle|translation|ubiquitin-dependent protein catabolic process|Wnt receptor signaling pathway	cytosol|extrinsic to internal side of plasma membrane|microtubule|perinuclear region of cytoplasm|ribosome	proline-rich region binding|protein kinase binding|structural constituent of ribosome|ubiquitin thiolesterase activity|ubiquitin-specific protease activity|zinc ion binding			skin(19)|large_intestine(3)|haematopoietic_and_lymphoid_tissue(3)|central_nervous_system(3)	28		all_cancers(37;0.0156)				AAGGCTGTGCACGAAGACTGC	0.468			NA	Mis|N|F|S		cylindroma	cylindroma			Familial_Cylindromatosis|Multiple_Trichoepithelioma_Familial				20	32					0	0	0.007413	0	0
PHLPP2	23035	broad.mit.edu	37	16	71748668	71748668	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr16:71748668T>G	uc002fax.2	-	1	37	c.31A>C	c.(31-33)AAT>CAT	p.N11H	PHLPP2_uc010cgf.2_Missense_Mutation_p.N11H|PHLPP2_uc002fay.1_Missense_Mutation_p.N11H	NM_015020	NP_055835	Q6ZVD8	PHLP2_HUMAN	PH domain and leucine rich repeat protein	11						cytoplasm|membrane|nucleus	metal ion binding|phosphoprotein phosphatase activity			ovary(1)|central_nervous_system(1)	2						CTTCTCCTATTCAAACAATTT	0.388			NA											22	21					0	0	0.00333	0	0
C17orf68	80169	broad.mit.edu	37	17	8132685	8132685	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr17:8132685T>G	uc002gkq.3	-	19	3150	c.3091A>C	c.(3091-3093)ATC>CTC	p.I1031L	C17orf68_uc010cnv.2_RNA	NM_025099	NP_079375	Q2NKJ3	CTC1_HUMAN	alpha accessory factor 132	1031					positive regulation of DNA replication|telomere maintenance	Stn1-Ten1 complex	protein binding|single-stranded DNA binding				0						ACAGAGACGATATGGCAAGAG	0.532			NA											4	94					0	0	0.000248	0	0
Unknown	0	broad.mit.edu	37	17	21731186	21731186	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr17:21731186A>G	uc002gyy.3	+	2	613	c.488A>G	c.(487-489)AAG>AGG	p.K163R						SubName: Full=cDNA FLJ51326, highly similar to Homo sapiens ubiquitin B (UBB), mRNA;												NA						CTGACCGGCAAGACCATCACC	0.532			NA											10	83					0	0	0.000978	0	0
ACACA	31	broad.mit.edu	37	17	35640264	35640264	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr17:35640264G>T	uc002hnm.2	-	5	594	c.403C>A	c.(403-405)CGG>AGG	p.R135R	ACACA_uc002hnk.2_Silent_p.R57R|ACACA_uc002hnl.2_Silent_p.R77R|ACACA_uc002hnn.2_Silent_p.R135R|ACACA_uc002hno.2_Silent_p.R172R|ACACA_uc010cuz.2_Silent_p.R135R|ACACA_uc002hnq.2_Silent_p.R57R	NM_198836	NP_942133	Q13085	ACACA_HUMAN	acetyl-Coenzyme A carboxylase alpha isoform 2	135	Biotin carboxylation.				acetyl-CoA metabolic process|energy reserve metabolic process|fatty acid biosynthetic process|long-chain fatty-acyl-CoA biosynthetic process|positive regulation of cellular metabolic process|protein homotetramerization|triglyceride biosynthetic process	cytosol	acetyl-CoA carboxylase activity|ATP binding|biotin carboxylase activity|metal ion binding|protein binding			large_intestine(1)|ovary(1)	2		Breast(25;0.00157)|Ovarian(249;0.15)			Biotin(DB00121)	CGGATAGACCGCATGCATTTC	0.448	Colon(23;82 258 739 2117 10493 24037 27661 34815 35438 36249)		NA											13	44					6.31663e-08	8.24584e-08	0.003163	1	0
SAMD14	201191	broad.mit.edu	37	17	48195572	48195572	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr17:48195572C>T	uc002iqg.2	-	3	462	c.163G>A	c.(163-165)GCC>ACC	p.A55T	SAMD14_uc002iqd.2_5'Flank|SAMD14_uc002iqe.2_5'UTR|SAMD14_uc002iqf.2_Missense_Mutation_p.A55T	NM_174920	NP_777580	Q8IZD0	SAM14_HUMAN	sterile alpha motif domain containing 14	55											0						GCGGAGCTGGCACTGTCCCGA	0.637			NA											34	47					0	0	0.005524	0	0
SCPEP1	59342	broad.mit.edu	37	17	55083594	55083594	+	Nonstop_Mutation	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr17:55083594T>C	uc002iuv.3	+	13	1410	c.1357T>C	c.(1357-1359)TAG>CAG	p.*453Q	SCPEP1_uc010dcl.2_RNA|SCPEP1_uc010wnk.1_Nonstop_Mutation_p.*403Q	NM_021626	NP_067639	Q9HB40	RISC_HUMAN	serine carboxypeptidase 1 precursor	453					proteolysis	extracellular region	serine-type carboxypeptidase activity			skin(1)	1	Breast(9;2.86e-08)					TCAGCAAGAATAGGATGGATG	0.512			NA											22	85					0	0	0.002299	0	0
LPIN2	9663	broad.mit.edu	37	18	2922113	2922113	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:2922113G>A	uc002klo.2	-	17	2498	c.2259C>T	c.(2257-2259)GAC>GAT	p.D753D		NM_014646	NP_055461	Q92539	LPIN2_HUMAN	lipin 2	753	C-LIP.				fatty acid metabolic process|positive regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent|triglyceride biosynthetic process	cytosol|endoplasmic reticulum membrane|nucleus	phosphatidate phosphatase activity|transcription coactivator activity			ovary(1)|skin(1)	2				READ - Rectum adenocarcinoma(2;0.0419)|Colorectal(6;0.156)		TTGTGCCCTTGTCATTGACCC	0.607			NA											7	51					0	0	0.001984	0	0
DSC3	1825	broad.mit.edu	37	18	28588372	28588372	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:28588372A>T	uc002kwj.3	-	10	1538	c.1383T>A	c.(1381-1383)CAT>CAA	p.H461Q	DSC3_uc002kwi.3_Missense_Mutation_p.H461Q	NM_001941	NP_001932	Q14574	DSC3_HUMAN	desmocollin 3 isoform Dsc3a preproprotein	461	Cadherin 3.|Extracellular (Potential).				homophilic cell adhesion|protein stabilization	desmosome|integral to membrane|membrane fraction	calcium ion binding|gamma-catenin binding			ovary(2)|skin(2)	4			OV - Ovarian serous cystadenocarcinoma(10;0.125)			GATCCCTCACATGAACTGTAA	0.473			NA											26	24					0	0	0.00333	0	0
DSG3	1830	broad.mit.edu	37	18	29046694	29046694	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:29046694T>G	uc002kws.2	+	11	1722	c.1613T>G	c.(1612-1614)GTA>GGA	p.V538G		NM_001944	NP_001935	P32926	DSG3_HUMAN	desmoglein 3 preproprotein	538	Extracellular (Potential).				cellular component disassembly involved in apoptosis|homophilic cell adhesion	cytosol|desmosome|integral to membrane	calcium ion binding			skin(4)|ovary(3)|lung(1)|central_nervous_system(1)	9			OV - Ovarian serous cystadenocarcinoma(10;0.00504)			TTGCCTGCCGTATGGAGTATC	0.408			NA											12	50					0	0	0.001368	0	0
KLHL14	57565	broad.mit.edu	37	18	30349741	30349741	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:30349741G>T	uc002kxm.1	-	2	1202	c.814C>A	c.(814-816)CCG>ACG	p.P272T		NM_020805	NP_065856	Q9P2G3	KLH14_HUMAN	kelch-like 14	272	BACK.					cytosol|endoplasmic reticulum membrane				ovary(1)	1						ACCAGCTCCGGGGCCGGGATG	0.637			NA											16	40					2.31682e-05	2.79072e-05	0.003163	1	0
ASXL3	80816	broad.mit.edu	37	18	31326095	31326095	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:31326095G>A	uc010dmg.1	+	12	6338	c.6283G>A	c.(6283-6285)GAA>AAA	p.E2095K	ASXL3_uc002kxq.2_Missense_Mutation_p.E1802K	NM_030632	NP_085135	Q9C0F0	ASXL3_HUMAN	additional sex combs like 3	2095					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	metal ion binding			ovary(2)|pancreas(1)	3						CAGCAGCTGTGAACTGGGCAT	0.408			NA											46	40					0	0	0.00361	0	0
ASXL3	80816	broad.mit.edu	37	18	31326451	31326451	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:31326451C>T	uc010dmg.1	+	12	6694	c.6639C>T	c.(6637-6639)TGC>TGT	p.C2213C	ASXL3_uc002kxq.2_Silent_p.C1920C	NM_030632	NP_085135	Q9C0F0	ASXL3_HUMAN	additional sex combs like 3	2213	PHD-type; atypical.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	metal ion binding			ovary(2)|pancreas(1)	3						AACTGAAATGCTCTTGCCGGC	0.522			NA											34	28					0	0	0.002445	0	0
ASXL3	80816	broad.mit.edu	37	18	31326453	31326453	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr18:31326453C>T	uc010dmg.1	+	12	6696	c.6641C>T	c.(6640-6642)TCT>TTT	p.S2214F	ASXL3_uc002kxq.2_Missense_Mutation_p.S1921F	NM_030632	NP_085135	Q9C0F0	ASXL3_HUMAN	additional sex combs like 3	2214	PHD-type; atypical.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	metal ion binding			ovary(2)|pancreas(1)	3						CTGAAATGCTCTTGCCGGCTG	0.517			NA											36	31					0	0	0.003271	0	0
STK11	6794	broad.mit.edu	37	19	1220370	1220370	+	Splice_Site	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:1220370A>T	uc002lrl.1	+	4	1580	c.465_splice	c.e4-2	p.G155_splice		NM_000455	NP_000446	Q15831	STK11_HUMAN	serine/threonine protein kinase 11						anoikis|cell cycle arrest|energy reserve metabolic process|insulin receptor signaling pathway|positive regulation of transforming growth factor beta receptor signaling pathway|regulation of fatty acid biosynthetic process|regulation of fatty acid oxidation	cytosol|nucleus	ATP binding|magnesium ion binding|protein serine/threonine kinase activity	p.0?(19)|p.?(3)		lung(174)|cervix(35)|skin(15)|large_intestine(12)|pancreas(6)|gastrointestinal_tract_(site_indeterminate)(5)|stomach(4)|ovary(4)|breast(2)|upper_aerodigestive_tract(1)|testis(1)|liver(1)|biliary_tract(1)|small_intestine(1)|urinary_tract(1)|oesophagus(1)|prostate(1)|kidney(1)	266		Acute lymphoblastic leukemia(61;2.53e-14)|all_hematologic(61;8.18e-10)|Lung NSC(49;7.93e-06)|all_lung(49;1.25e-05)|Breast(49;0.000172)|Renal(1328;0.0183)|Hepatocellular(1079;0.137)		UCEC - Uterine corpus endometrioid carcinoma (162;6.64e-05)|OV - Ovarian serous cystadenocarcinoma(105;1.09e-113)|Epithelial(107;3.79e-112)|all cancers(105;1.67e-104)|BRCA - Breast invasive adenocarcinoma(158;0.00136)|Lung(535;0.00942)|STAD - Stomach adenocarcinoma(1328;0.18)		TGCTGCCCGCAGGTACTTCTG	0.652			14	D|Mis|N|F|S		NSCLC|pancreatic	jejunal harmartoma|ovarian|testicular|pancreatic			Peutz-Jeghers_syndrome	TSP Lung(3;<1E-08)			15	1					0	0	0.004007	0	0
MUC16	94025	broad.mit.edu	37	19	9061703	9061703	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:9061703C>A	uc002mkp.2	-	3	25947	c.25743G>T	c.(25741-25743)GAG>GAT	p.E8581D		NM_024690	NP_078966	Q8WXI7	MUC16_HUMAN	mucin 16	8583	Ser-rich.|Thr-rich.|Extracellular (Potential).				cell adhesion	extracellular space|extrinsic to membrane|integral to membrane|plasma membrane	protein binding			lung(30)|ovary(15)|breast(8)|large_intestine(1)|skin(1)|prostate(1)|pancreas(1)	57						AGGAGATGCTCTCTGGTAATG	0.522			NA											15	30					3.27435e-08	4.31693e-08	0.00245	1	0
MUC16	94025	broad.mit.edu	37	19	9082974	9082974	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:9082974G>T	uc002mkp.2	-	1	9045	c.8841C>A	c.(8839-8841)GCC>GCA	p.A2947A		NM_024690	NP_078966	Q8WXI7	MUC16_HUMAN	mucin 16	2948	Ser-rich.|Thr-rich.|Extracellular (Potential).				cell adhesion	extracellular space|extrinsic to membrane|integral to membrane|plasma membrane	protein binding			lung(30)|ovary(15)|breast(8)|large_intestine(1)|skin(1)|prostate(1)|pancreas(1)	57						TTGCACTTATGGCCTTTGTGG	0.493			NA											18	65					1.99824e-07	2.57055e-07	0.00499	1	0
PKN1	5585	broad.mit.edu	37	19	14569148	14569149	+	Nonsense_Mutation	DNP	GC	GC	CT			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	GC	GC	-	-	GC	GC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:14569148_14569149GC>CT	uc002myp.2	+	9	1548_1549	c.1380_1381GC>CT	c.(1378-1383)GTGCAG>GTCTAG	p.Q461*	PKN1_uc002myq.2_Nonsense_Mutation_p.Q467*	NM_002741	NP_002732	Q16512	PKN1_HUMAN	protein kinase N1 isoform 2	461	C2.				activation of JUN kinase activity|regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor|transcription, DNA-dependent	endosome|nucleus|plasma membrane	androgen receptor binding|ATP binding|chromatin binding|GTP-Rho binding|histone binding|histone deacetylase binding|histone kinase activity (H3-T11 specific)|ligand-dependent nuclear receptor transcription coactivator activity|protein kinase C activity|protein kinase C binding|Rac GTPase binding			ovary(2)|breast(2)|skin(2)|large_intestine(1)|central_nervous_system(1)	8						GGCATGAGGTGCAGCTGGACAT	0.569	NSCLC(185;2539 2965 10733 52867)		NA											11	19					0	0	0.004672	0	0
ZNF676	163223	broad.mit.edu	37	19	22363718	22363718	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:22363718G>T	uc002nqs.1	-	3	1119	c.801C>A	c.(799-801)ACC>ACA	p.T267T		NM_001001411	NP_001001411	Q8N7Q3	ZN676_HUMAN	zinc finger protein 676	267	C2H2-type 4.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0		Lung NSC(12;0.0207)|all_lung(12;0.0214)|all_epithelial(12;0.114)				GTGTATTAAGGGTTGAGACGC	0.388			NA											30	10					5.60225e-13	7.9817e-13	0.001786	1	0
ZNF676	163223	broad.mit.edu	37	19	22379435	22379435	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:22379435T>A	uc002nqs.1	-	1	319	c.1A>T	c.(1-3)ATG>TTG	p.M1L		NM_001001411	NP_001001411	Q8N7Q3	ZN676_HUMAN	zinc finger protein 676	1	KRAB.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0		Lung NSC(12;0.0207)|all_lung(12;0.0214)|all_epithelial(12;0.114)				TTCTCTAACATCACATTCCTA	0.368			NA											60	21					0	0	0.00361	0	0
LGALS4	3960	broad.mit.edu	37	19	39292738	39292738	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:39292738C>T	uc002ojg.2	-	9	933	c.719G>A	c.(718-720)CGC>CAC	p.R240H		NM_006149	NP_006140	P56470	LEG4_HUMAN	galectin-4	240	Galectin 2.				cell adhesion	cytosol|plasma membrane	sugar binding			ovary(1)|skin(1)	2	all_cancers(60;1.02e-05)|Ovarian(47;0.0454)		Lung(45;0.00416)|LUSC - Lung squamous cell carcinoma(53;0.00741)			GTTGCCCATGCGGGGATTAAT	0.562			NA											22	20					0	0	0.001523	0	0
PLEKHG2	64857	broad.mit.edu	37	19	39911746	39911746	+	Silent	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:39911746A>T	uc010xuz.1	+	15	1804	c.1479A>T	c.(1477-1479)CCA>CCT	p.P493P	PLEKHG2_uc010xuy.1_Silent_p.P434P|PLEKHG2_uc002olj.2_Silent_p.P493P|PLEKHG2_uc010xva.1_Intron	NM_022835	NP_073746	Q9H7P9	PKHG2_HUMAN	common-site lymphoma/leukemia guanine nucleotide	493					apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol	Rho guanyl-nucleotide exchange factor activity			skin(2)|pancreas(1)|breast(1)	4	all_cancers(60;3.08e-07)|all_lung(34;2.66e-08)|Lung NSC(34;3e-08)|all_epithelial(25;6.57e-07)|Ovarian(47;0.0569)		Epithelial(26;2.92e-26)|all cancers(26;2.01e-23)|Lung(45;0.000499)|LUSC - Lung squamous cell carcinoma(53;0.000657)			TCATGTTCCCACAGAACGGTC	0.637			NA											11	9					0	0	0.000978	0	0
PSG7	5676	broad.mit.edu	37	19	43439788	43439788	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:43439788G>T	uc002ovl.3	-	2	300	c.198C>A	c.(196-198)ATC>ATA	p.I66I	PSG3_uc002ouf.2_Intron|PSG11_uc002ouw.2_Intron|PSG10_uc002ouv.1_Intron|PSG6_uc002ovh.1_Intron|PSG6_uc002ovi.2_Intron|PSG6_uc010xwk.1_Intron|PSG11_uc002ovk.1_Intron|PSG7_uc010xwl.1_Intron	NM_002783	NP_002774	Q13046	PSG7_HUMAN	pregnancy specific beta-1-glycoprotein 7	66	Ig-like V-type.				female pregnancy	extracellular region					0		Prostate(69;0.00682)				CTTTGTACCAGATGTGGCCAG	0.438			NA											116	83					1.39691e-52	2.37295e-52	0.00361	1	0
ZNF234	10780	broad.mit.edu	37	19	44661481	44661481	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:44661481C>T	uc002oym.2	+	6	1619	c.1312C>T	c.(1312-1314)CGT>TGT	p.R438C	ZNF234_uc002oyl.3_Missense_Mutation_p.R438C	NM_006630	NP_006621	Q14588	ZN234_HUMAN	zinc finger protein 234	438	C2H2-type 11.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0		Prostate(69;0.0435)				TAAAGCCTTCCGTCAGAGTTC	0.418			NA											6	33					0	0	0.001168	0	0
ZNF432	9668	broad.mit.edu	37	19	52537513	52537513	+	Silent	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:52537513A>G	uc002pyk.2	-	5	1737	c.1419T>C	c.(1417-1419)ATT>ATC	p.I473I		NM_014650	NP_055465	O94892	ZN432_HUMAN	zinc finger protein 432	473	C2H2-type 10.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(2)|pancreas(1)	3		all_neural(266;0.117)		GBM - Glioblastoma multiforme(134;0.0054)|OV - Ovarian serous cystadenocarcinoma(262;0.0182)		GCTGATGTACAATCAGCCGAC	0.463			NA											8	28					0	0	0.00308	0	0
ZNF480	147657	broad.mit.edu	37	19	52826033	52826033	+	Silent	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:52826033T>G	uc010ydl.1	+	5	1600	c.1530T>G	c.(1528-1530)CCT>CCG	p.P510P	ZNF480_uc002pyv.2_Silent_p.P433P|ZNF480_uc010ydm.1_Silent_p.P467P|ZNF480_uc010epn.2_Silent_p.P341P|uc002pyw.1_Intron	NM_144684	NP_653285	Q8WV37	ZN480_HUMAN	zinc finger protein 480	510					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	nucleic acid binding|zinc ion binding			large_intestine(1)	1				GBM - Glioblastoma multiforme(134;0.00212)|OV - Ovarian serous cystadenocarcinoma(262;0.00369)		GAGAGAAACCTTACAAATGTA	0.393			NA											6	18					0	0	0.001984	0	0
VN1R2	317701	broad.mit.edu	37	19	53761983	53761983	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:53761983T>A	uc002qbi.2	+	1	439	c.355T>A	c.(355-357)TAC>AAC	p.Y119N		NM_173856	NP_776255	Q8NFZ6	VN1R2_HUMAN	vomeronasal 1 receptor 2	119	Extracellular (Potential).				response to pheromone	integral to membrane|plasma membrane	pheromone receptor activity				0				GBM - Glioblastoma multiforme(134;0.00301)		CTTTAGGGGATACAAGCCAAG	0.353			NA											11	6					0	0	0.001368	0	0
ZNF835	90485	broad.mit.edu	37	19	57175427	57175427	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr19:57175427G>A	uc010ygo.1	-	2	1206	c.1206C>T	c.(1204-1206)CAC>CAT	p.H402H	ZNF835_uc010ygn.1_Silent_p.H380H	NM_001005850	NP_001005850			zinc finger protein 835											pancreas(3)|skin(1)	4						GCACGAGGCGGTGCTGGAGGA	0.672			NA											3	24					0	0	0.004672	0	0
VSNL1	7447	broad.mit.edu	37	2	17836533	17836533	+	Missense_Mutation	SNP	C	C	G	rs146113368		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:17836533C>G	uc002rcm.2	+	4	832	c.448C>G	c.(448-450)CGA>GGA	p.R150G		NM_003385	NP_003376	P62760	VISL1_HUMAN	visinin-like 1	150	EF-hand 4.						calcium ion binding			ovary(1)	1	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.158)					GCCTGAGCAGCGAGTAGACAA	0.413			NA											14	32					0	0	0.001855	0	0
SFXN5	94097	broad.mit.edu	37	2	73268002	73268002	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:73268002G>A	uc002siq.2	-	3	361	c.230C>T	c.(229-231)CCG>CTG	p.P77L	SFXN5_uc002sio.2_5'UTR|SFXN5_uc010yrc.1_5'UTR|SFXN5_uc002sip.2_RNA|SFXN5_uc010fet.2_Missense_Mutation_p.P77L	NM_144579	NP_653180	Q8TD22	SFXN5_HUMAN	sideroflexin 5	77					iron ion homeostasis	integral to membrane	cation transmembrane transporter activity			ovary(1)	1						GGTGACCCCCGGGCGCAGGGT	0.557			NA											4	31					0	0	0.000602	0	0
ALMS1	7840	broad.mit.edu	37	2	73681086	73681086	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:73681086T>G	uc002sje.1	+	10	7546	c.7435T>G	c.(7435-7437)TCA>GCA	p.S2479A	ALMS1_uc002sjf.1_Missense_Mutation_p.S2435A|ALMS1_uc002sjg.2_Missense_Mutation_p.S1865A|ALMS1_uc002sjh.1_Missense_Mutation_p.S1865A	NM_015120	NP_055935	Q8TCU4	ALMS1_HUMAN	Alstrom syndrome 1	2477					G2/M transition of mitotic cell cycle	centrosome|cilium|cytosol|microtubule basal body|spindle pole				skin(3)|ovary(2)|breast(2)|pancreas(1)|lung(1)	9						CAGTGTAGATTCACTGGCTGC	0.448			NA											6	24					0	0	0.001168	0	0
MTHFD2	10797	broad.mit.edu	37	2	74441254	74441254	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:74441254G>A	uc002skk.2	+	8	1017	c.938G>A	c.(937-939)GGC>GAC	p.G313D	SLC4A5_uc002skl.2_Intron|MTHFD2_uc002skj.2_Missense_Mutation_p.G211D|MTHFD2_uc010yro.1_Missense_Mutation_p.G211D|MTHFD2_uc010ffb.2_Missense_Mutation_p.G230D|MTHFD2_uc010yrp.1_Missense_Mutation_p.G149D	NM_006636	NP_006627	P13995	MTDC_HUMAN	methylenetetrahydrofolate dehydrogenase 2	313					folic acid-containing compound biosynthetic process|one-carbon metabolic process|tetrahydrofolate metabolic process	mitochondrion	magnesium ion binding|methenyltetrahydrofolate cyclohydrolase activity|methylenetetrahydrofolate dehydrogenase (NAD+) activity|methylenetetrahydrofolate dehydrogenase (NADP+) activity|phosphate binding|protein binding				0					NADH(DB00157)|Tetrahydrofolic acid(DB00116)	GGAGGTGTTGGCCCCATGACA	0.463			NA											28	106					0	0	0.005443	0	0
CTNNA2	1496	broad.mit.edu	37	2	80773043	80773043	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:80773043C>A	uc010ysh.1	+	10	1400	c.1395C>A	c.(1393-1395)GCC>GCA	p.A465A	CTNNA2_uc010yse.1_Silent_p.A465A|CTNNA2_uc010ysf.1_Silent_p.A465A|CTNNA2_uc010ysg.1_Silent_p.A465A|CTNNA2_uc010ysi.1_Silent_p.A97A	NM_004389	NP_004380	P26232	CTNA2_HUMAN	catenin, alpha 2 isoform 1	465					axonogenesis|brain morphogenesis|cell-cell adhesion|dendrite morphogenesis|muscle cell differentiation|positive regulation of muscle cell differentiation|prepulse inhibition|radial glia guided migration of Purkinje cell|regulation of synapse structural plasticity	actin cytoskeleton|axon|cytosol	cadherin binding|structural constituent of cytoskeleton			pancreas(4)|lung(3)|breast(1)|skin(1)	9						TCATCAATGCCGCTCTGACAC	0.498			NA											14	19					6.31663e-08	8.24584e-08	0.003163	1	0
NMS	129521	broad.mit.edu	37	2	101089998	101089998	+	Silent	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:101089998T>G	uc002tan.1	+	3	187	c.180T>G	c.(178-180)CCT>CCG	p.P60P		NM_001011717	NP_001011717	Q5H8A3	NMS_HUMAN	neuromedin S precursor	60					neuropeptide signaling pathway|regulation of smooth muscle contraction	extracellular region				ovary(1)	1						CTCGCCAACCTAAGGTAAAAA	0.274			NA											4	13					0	0	0.000602	0	0
SLC9A4	389015	broad.mit.edu	37	2	103149083	103149083	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:103149083C>A	uc002tbz.3	+	12	2790	c.2333C>A	c.(2332-2334)ACA>AAA	p.T778K		NM_001011552	NP_001011552	Q6AI14	SL9A4_HUMAN	solute carrier family 9 (sodium/hydrogen	778	Cytoplasmic (Potential).				regulation of pH	apical plasma membrane|basolateral plasma membrane|integral to membrane	sodium:hydrogen antiporter activity			skin(2)|central_nervous_system(1)	3						TCGAGGTGGACAGCTGACCAT	0.498			NA											13	6					0.00185496	0.0021007	0.001855	1	0
LRP1B	53353	broad.mit.edu	37	2	140992400	140992400	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:140992400C>T	uc002tvj.1	-	90	14586	c.13614G>A	c.(13612-13614)CCG>CCA	p.P4538P		NM_018557	NP_061027	Q9NZR2	LRP1B_HUMAN	low density lipoprotein-related protein 1B	4538	Cytoplasmic (Potential).				protein transport|receptor-mediated endocytosis	integral to membrane	calcium ion binding			lung(17)|skin(12)|ovary(12)|pancreas(3)|upper_aerodigestive_tract(2)|central_nervous_system(2)|liver(1)|kidney(1)	50		all_cancers(3;1.1e-60)|all_epithelial(3;1.94e-59)|all_lung(3;1.09e-24)|Lung NSC(3;5.65e-24)|Esophageal squamous(3;5.41e-13)|Renal(3;0.000147)|Breast(3;0.000527)|Hepatocellular(3;0.011)|all_neural(3;0.014)|Colorectal(150;0.101)		UCEC - Uterine corpus endometrioid carcinoma (2;0.00139)|Epithelial(1;1.25e-24)|all cancers(1;8.86e-24)|OV - Ovarian serous cystadenocarcinoma(1;2.45e-12)|LUSC - Lung squamous cell carcinoma(1;2.97e-10)|Lung(1;6.05e-09)|BRCA - Breast invasive adenocarcinoma(221;0.0103)		ggtagatgggcggcgctgtgt	0.05	Colon(99;50 2074 2507 20106)		NA								TSP Lung(27;0.18)			14	39					0	0	0.00499	0	0
MBD5	55777	broad.mit.edu	37	2	149227121	149227121	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:149227121A>T	uc002twm.3	+	9	2597	c.1609A>T	c.(1609-1611)AGC>TGC	p.S537C	MBD5_uc010zbs.1_RNA|MBD5_uc010fns.2_Missense_Mutation_p.S537C|MBD5_uc002twn.1_Translation_Start_Site	NM_018328	NP_060798	Q9P267	MBD5_HUMAN	methyl-CpG binding domain protein 5	537						chromosome|nucleus	chromatin binding|DNA binding			skin(3)|ovary(2)	5				BRCA - Breast invasive adenocarcinoma(221;0.0569)		AAATACCCCAAGCAGTGCAGC	0.438			NA											24	40					0	0	0.002299	0	0
NEB	4703	broad.mit.edu	37	2	152548676	152548676	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:152548676C>G	uc010fnx.2	-	22	2194	c.2003G>C	c.(2002-2004)AGA>ACA	p.R668T	NEB_uc010fny.1_Missense_Mutation_p.R222T	NM_004543	NP_004534	P20929	NEBU_HUMAN	nebulin isoform 3	668					muscle filament sliding|muscle organ development|regulation of actin filament length|somatic muscle development	actin cytoskeleton|cytosol|Z disc	actin binding|structural constituent of muscle			ovary(8)|large_intestine(5)|breast(3)|central_nervous_system(2)|skin(1)|pancreas(1)	20				BRCA - Breast invasive adenocarcinoma(221;0.219)		GTCTTTATATCTAGCCTGAAA	0.388			NA											33	48					0	0	0.002445	0	0
NEB	4703	broad.mit.edu	37	2	152582033	152582033	+	Silent	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:152582033T>C	uc010fnx.2	-	6	527	c.336A>G	c.(334-336)CCA>CCG	p.P112P		NM_004543	NP_004534	P20929	NEBU_HUMAN	nebulin isoform 3	112					muscle filament sliding|muscle organ development|regulation of actin filament length|somatic muscle development	actin cytoskeleton|cytosol|Z disc	actin binding|structural constituent of muscle			ovary(8)|large_intestine(5)|breast(3)|central_nervous_system(2)|skin(1)|pancreas(1)	20				BRCA - Breast invasive adenocarcinoma(221;0.219)		TGCTGGCGTATGGCTGTCCTT	0.393			NA											46	86					0	0	0.00361	0	0
TTN	7273	broad.mit.edu	37	2	179474204	179474204	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:179474204G>T	uc010zfg.1	-	222	44353	c.44129C>A	c.(44128-44130)ACT>AAT	p.T14710N	uc002ump.1_Intron|TTN_uc010zfh.1_Missense_Mutation_p.T8405N|TTN_uc010zfi.1_Missense_Mutation_p.T8338N|TTN_uc010zfj.1_Missense_Mutation_p.T8213N	NM_133378	NP_596869	Q8WZ42	TITIN_HUMAN	titin isoform N2-A	15637							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			ovary(58)|stomach(19)|large_intestine(17)|lung(16)|skin(16)|breast(10)|pancreas(7)|kidney(4)|central_nervous_system(3)|urinary_tract(2)|upper_aerodigestive_tract(1)	153			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			CCATGTAATAGTTGGGTAAGG	0.408			NA											27	36					3.01185e-09	4.03101e-09	0.003954	1	0
COL3A1	1281	broad.mit.edu	37	2	189855031	189855031	+	Splice_Site	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr2:189855031A>T	uc002uqj.1	+	10	862	c.745_splice	c.e10-2	p.G249_splice	COL3A1_uc010frw.1_5'Flank	NM_000090	NP_000081	P02461	CO3A1_HUMAN	collagen type III alpha 1 preproprotein						axon guidance|cell-matrix adhesion|collagen biosynthetic process|collagen fibril organization|fibril organization|heart development|integrin-mediated signaling pathway|negative regulation of immune response|peptide cross-linking|platelet activation|response to cytokine stimulus|response to radiation|skin development|transforming growth factor beta receptor signaling pathway	collagen type III|extracellular space	extracellular matrix structural constituent|integrin binding|platelet-derived growth factor binding			central_nervous_system(7)|ovary(4)|large_intestine(2)	13			OV - Ovarian serous cystadenocarcinoma(117;0.0106)|Epithelial(96;0.141)		Collagenase(DB00048)|Palifermin(DB00039)	CATTATTTTTAGGGTATCAAA	0.328			NA											4	6					0	0	0.000248	0	0
KIAA1755	85449	broad.mit.edu	37	20	36869386	36869386	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr20:36869386A>T	uc002xhy.1	-	3	1419	c.1147T>A	c.(1147-1149)TGT>AGT	p.C383S	KIAA1755_uc002xhz.1_Missense_Mutation_p.C383S	NM_001029864	NP_001025035	Q5JYT7	K1755_HUMAN	hypothetical protein LOC85449	383										ovary(4)|pancreas(1)	5		Myeloproliferative disorder(115;0.00874)				CCAGAGGCACAGTCCAGTGCG	0.557			NA											82	63					0	0	0.00361	0	0
PIGT	51604	broad.mit.edu	37	20	44050087	44050087	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr20:44050087G>T	uc002xoh.1	+	9	1171	c.1098G>T	c.(1096-1098)GGG>GGT	p.G366G	PIGT_uc010ghd.1_Silent_p.G273G|PIGT_uc010ghc.1_RNA|PIGT_uc010ghe.1_Silent_p.G329G|PIGT_uc010ghf.1_Silent_p.G319G|PIGT_uc002xoj.1_Intron|PIGT_uc002xok.1_Silent_p.G331G|PIGT_uc010zwu.1_Silent_p.G104G|PIGT_uc002xoi.1_RNA|PIGT_uc010zwv.1_Silent_p.G104G|PIGT_uc010zww.1_Silent_p.G310G|PIGT_uc010zwx.1_Silent_p.G201G|PIGT_uc010zwy.1_Silent_p.G264G|PIGT_uc010zwz.1_Silent_p.G104G|PIGT_uc010zxa.1_Silent_p.G204G|PIGT_uc002xol.1_Intron|PIGT_uc010zxb.1_Silent_p.G42G|PIGT_uc002xom.1_5'Flank	NM_015937	NP_057021	Q969N2	PIGT_HUMAN	phosphatidylinositol glycan anchor biosynthesis,	366	Lumenal (Potential).				attachment of GPI anchor to protein|C-terminal protein lipidation	GPI-anchor transamidase complex	protein binding			pancreas(1)	1		Myeloproliferative disorder(115;0.0122)				TGCAGAAGGGGGAGCTGAGCA	0.592			NA											26	35					4.22769e-11	5.89652e-11	0.00632	1	0
TH1L	51497	broad.mit.edu	37	20	57568155	57568155	+	Silent	SNP	G	G	A	rs141996345	byFrequency	TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr20:57568155G>A	uc002yag.2	+	11	1386	c.1359G>A	c.(1357-1359)GCG>GCA	p.A453A	TH1L_uc002yaf.1_RNA|TH1L_uc002yah.2_Silent_p.A453A	NM_198976	NP_945327	Q8IXH7	NELFD_HUMAN	TH1-like protein	453					negative regulation of transcription, DNA-dependent|positive regulation of viral transcription|transcription elongation from RNA polymerase II promoter|viral reproduction	nucleoplasm	protein binding			upper_aerodigestive_tract(1)|ovary(1)|skin(1)	3	all_lung(29;0.00711)		Colorectal(105;0.109)			TCCACCTGGCGTTGCTGGATG	0.502			NA											12	51					0	0	0.001368	0	0
PCNT	5116	broad.mit.edu	37	21	47808656	47808656	+	Splice_Site	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr21:47808656G>T	uc002zji.3	+	18	3572	c.3465_splice	c.e18-1	p.R1155_splice	PCNT_uc002zjj.2_Splice_Site_p.R1037_splice	NM_006031	NP_006022	O95613	PCNT_HUMAN	pericentrin						cilium assembly|G2/M transition of mitotic cell cycle	cytosol|microtubule	calmodulin binding			ovary(4)|breast(2)|pancreas(2)	8	Breast(49;0.112)					TCCTGTCTCAGAGGGGCCCTC	0.667			NA											25	39					5.45727e-16	8.21691e-16	0.008361	1	0
SLC5A4	6527	broad.mit.edu	37	22	32650132	32650133	+	Missense_Mutation	DNP	CC	CC	AA	rs148427710		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	CC	CC	-	-	CC	CC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr22:32650132_32650133CC>AA	uc003ami.2	-	2	205_206	c.203_204GG>TT	c.(202-204)TGG>TTT	p.W68F		NM_014227	NP_055042	Q9NY91	SC5A4_HUMAN	solute carrier family 5 (low affinity glucose	68	Helical; (Potential).				carbohydrate transport|sodium ion transport	integral to membrane	symporter activity				0						CACTTACCGGCCACCAGGCCAT	0.411			NA											12	46					0	0	0.004672	0	0
GRM7	2917	broad.mit.edu	37	3	7721841	7721841	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:7721841G>C	uc003bqm.2	+	9	2831	c.2557G>C	c.(2557-2559)GAA>CAA	p.E853Q	GRM7_uc011ata.1_RNA|GRM7_uc011atb.1_RNA|GRM7_uc010hcf.2_RNA|GRM7_uc011atc.1_RNA|GRM7_uc010hcg.2_Missense_Mutation_p.E853Q|GRM7_uc003bql.2_Missense_Mutation_p.E853Q|GRM7_uc003bqn.1_Missense_Mutation_p.E436Q	NM_000844	NP_000835	Q14831	GRM7_HUMAN	glutamate receptor, metabotropic 7 isoform a	853	Cytoplasmic (Potential).				negative regulation of adenylate cyclase activity|negative regulation of cAMP biosynthetic process|negative regulation of glutamate secretion|sensory perception of smell|sensory perception of sound|synaptic transmission	asymmetric synapse|axon|cell cortex|dendritic shaft|integral to plasma membrane|postsynaptic membrane|presynaptic active zone	adenylate cyclase inhibitor activity|calcium ion binding|glutamate binding|group III metabotropic glutamate receptor activity|PDZ domain binding|serine binding			ovary(4)|lung(3)	7					L-Glutamic Acid(DB00142)	TTTCCACCCTGAACTCAATGT	0.502			NA											41	23					0	0	0.002852	0	0
TRANK1	9881	broad.mit.edu	37	3	36897333	36897333	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:36897333C>T	uc003cgj.2	-	3	2400	c.2098G>A	c.(2098-2100)GAG>AAG	p.E700K		NM_014831	NP_055646	O15050	TRNK1_HUMAN	lupus brain antigen 1	1250					DNA repair		ATP binding|ATP-dependent DNA helicase activity|DNA binding			ovary(1)|central_nervous_system(1)	2						ACCTCAGCCTCCTCTTCATCC	0.483			NA											23	82					0	0	0.00278	0	0
SCN10A	6336	broad.mit.edu	37	3	38739794	38739794	+	Silent	SNP	G	G	A	rs142804903		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:38739794G>A	uc003ciq.2	-	27	4917	c.4917C>T	c.(4915-4917)GAC>GAT	p.D1639D		NM_006514	NP_006505	Q9Y5Y9	SCNAA_HUMAN	sodium channel, voltage-gated, type X, alpha	1639	IV.				sensory perception	voltage-gated sodium channel complex				ovary(5)|skin(3)|large_intestine(1)|kidney(1)	10				KIRC - Kidney renal clear cell carcinoma(284;0.0769)|Kidney(284;0.0945)	Benzocaine(DB01086)|Bupivacaine(DB00297)|Chloroprocaine(DB01161)|Cocaine(DB00907)|Dibucaine(DB00527)|Dyclonine(DB00645)|Hexylcaine(DB00473)|Levobupivacaine(DB01002)|Lidocaine(DB00281)|Mepivacaine(DB00961)|Oxybuprocaine(DB00892)|Procaine(DB00721)|Proparacaine(DB00807)|Ropivacaine(DB00296)	TGAACATGTCGTCGATGCCAG	0.547			NA											31	98					0	0	0.003271	0	0
PLXNB1	5364	broad.mit.edu	37	3	48461086	48461086	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:48461086G>A	uc003csw.2	-	11	2879	c.2609C>T	c.(2608-2610)TCA>TTA	p.S870L	PLXNB1_uc003csu.2_Intron|PLXNB1_uc003csx.2_Missense_Mutation_p.S870L|PLXNB1_uc010hjx.1_Intron	NM_002673	NP_002664	O43157	PLXB1_HUMAN	plexin B1 precursor	870	Extracellular (Potential).				axon guidance|cell migration|intracellular signal transduction|regulation of cell shape|regulation of cytoskeleton organization|regulation of small GTPase mediated signal transduction|semaphorin-plexin signaling pathway	extracellular region|integral to plasma membrane|intracellular|semaphorin receptor complex	GTPase activator activity|semaphorin receptor activity|semaphorin receptor binding			ovary(2)|pancreas(1)|breast(1)|skin(1)	5				BRCA - Breast invasive adenocarcinoma(193;0.000292)|KIRC - Kidney renal clear cell carcinoma(197;0.00549)|Kidney(197;0.00619)		TCCATCACCTGAGAGGAGGGT	0.687			NA											10	36					0	0	0.008291	0	0
CELSR3	1951	broad.mit.edu	37	3	48697796	48697796	+	Missense_Mutation	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:48697796T>C	uc003cul.2	-	1	2553	c.2272A>G	c.(2272-2274)ATG>GTG	p.M758V	CELSR3_uc003cuf.1_Missense_Mutation_p.M828V	NM_001407	NP_001398	Q9NYQ7	CELR3_HUMAN	cadherin EGF LAG seven-pass G-type receptor 3	758	Extracellular (Potential).|Cadherin 5.				homophilic cell adhesion|multicellular organismal development|neuropeptide signaling pathway	integral to membrane|plasma membrane	calcium ion binding|G-protein coupled receptor activity|protein binding			ovary(5)|upper_aerodigestive_tract(2)|central_nervous_system(2)|skin(2)	11				BRCA - Breast invasive adenocarcinoma(193;0.000292)|KIRC - Kidney renal clear cell carcinoma(197;0.00549)|Kidney(197;0.00619)		TACTCCTTCATTGTGAACTCA	0.567			NA											19	47					0	0	0.007413	0	0
GTF2E1	2960	broad.mit.edu	37	3	120500000	120500000	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:120500000G>C	uc003edz.3	+	5	1117	c.1003G>C	c.(1003-1005)GCC>CCC	p.A335P		NM_005513	NP_005504	P29083	T2EA_HUMAN	general transcription factor IIE, polypeptide 1,	335					interspecies interaction between organisms|regulation of transcription, DNA-dependent|transcription elongation from RNA polymerase II promoter|transcription initiation from RNA polymerase II promoter|viral reproduction	nucleoplasm	protein binding|zinc ion binding			ovary(1)	1				GBM - Glioblastoma multiforme(114;0.159)		GACTTCCTCTGCCATGGCTGG	0.557			NA											8	24					0	0	0.00308	0	0
TRPC1	7220	broad.mit.edu	37	3	142467281	142467281	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:142467281A>G	uc003evc.2	+	4	747	c.611A>G	c.(610-612)AAG>AGG	p.K204R	TRPC1_uc003evb.2_Missense_Mutation_p.K170R	NM_003304	NP_003295	P48995	TRPC1_HUMAN	transient receptor potential cation channel,	204	Cytoplasmic (Potential).				axon guidance|cytosolic calcium ion homeostasis|positive regulation of release of sequestered calcium ion into cytosol|response to calcium ion	cytosol|integral to plasma membrane	protein binding|store-operated calcium channel activity			ovary(2)	2						AAAAACAAAAAGGATAGCCTC	0.338			NA											34	40					0	0	0.002836	0	0
SLITRK3	22865	broad.mit.edu	37	3	164907724	164907724	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr3:164907724A>T	uc003fej.3	-	2	1339	c.895T>A	c.(895-897)TCA>ACA	p.S299T	SLITRK3_uc003fek.2_Missense_Mutation_p.S299T	NM_014926	NP_055741	O94933	SLIK3_HUMAN	slit and trk like 3 protein precursor	299	Extracellular (Potential).					integral to membrane				ovary(6)|skin(3)|pancreas(1)	10						TTACTTGATGACGAATGTGGA	0.438			NA								HNSCC(40;0.11)			20	62					0	0	0.008871	0	0
KIAA1530	57654	broad.mit.edu	37	4	1346874	1346874	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr4:1346874C>T	uc003gde.3	+	5	1054	c.607C>T	c.(607-609)CTG>TTG	p.L203L		NM_020894	NP_065945	Q2YD98	K1530_HUMAN	hypothetical protein LOC57654	203											0			OV - Ovarian serous cystadenocarcinoma(23;0.0138)			CTTTAGGCTGCTGGTGCCTTT	0.567			NA											20	35					0	0	0.007413	0	0
AFAP1	60312	broad.mit.edu	37	4	7802188	7802188	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr4:7802188T>A	uc003gkg.1	-	10	1520	c.1247A>T	c.(1246-1248)CAG>CTG	p.Q416L	AFAP1_uc011bwk.1_Missense_Mutation_p.Q416L	NM_198595	NP_940997	Q8N556	AFAP1_HUMAN	actin filament associated protein 1	416	PH 2.					actin cytoskeleton|cytoplasm|focal adhesion	actin binding				0						TGCAACCTCCTGGCCGTTGCG	0.547			NA											4	17					0	0	0.000602	0	0
GABRG1	2565	broad.mit.edu	37	4	46043081	46043081	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr4:46043081G>C	uc003gxb.2	-	9	1474	c.1322C>G	c.(1321-1323)TCT>TGT	p.S441C		NM_173536	NP_775807	Q8N1C3	GBRG1_HUMAN	gamma-aminobutyric acid A receptor, gamma 1	441	Cytoplasmic (Probable).				gamma-aminobutyric acid signaling pathway	cell junction|chloride channel complex|postsynaptic membrane	chloride channel activity|extracellular ligand-gated ion channel activity			ovary(2)	2				Lung(65;0.106)|LUSC - Lung squamous cell carcinoma(721;0.23)		TCTAGAATAAGAGTCAATTTT	0.393			NA											54	27					0	0	0.00361	0	0
NHEDC1	150159	broad.mit.edu	37	4	103822321	103822321	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr4:103822321C>G	uc003hww.2	-	12	1623	c.1501G>C	c.(1501-1503)GAT>CAT	p.D501H	NHEDC1_uc003hwu.2_Intron|NHEDC1_uc010ilm.2_Intron|NHEDC1_uc003hwv.2_Intron|NHEDC1_uc011cev.1_Missense_Mutation_p.D274H	NM_139173	NP_631912	Q4ZJI4	NHDC1_HUMAN	Na+/H+ exchanger domain containing 1 isoform 1	501						integral to membrane	solute:hydrogen antiporter activity			ovary(1)|skin(1)	2		Hepatocellular(203;0.217)		OV - Ovarian serous cystadenocarcinoma(123;1.5e-08)		TTGCTTGGATCATAATGGCGT	0.378			NA											4	169					0	0	0.001984	0	0
KIAA1109	84162	broad.mit.edu	37	4	123264593	123264593	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr4:123264593C>T	uc003ieh.2	+	71	12426	c.12381C>T	c.(12379-12381)GGC>GGT	p.G4127G	KIAA1109_uc003iem.2_Silent_p.G483G|KIAA1109_uc003ien.2_Silent_p.G61G	NM_015312	NP_056127	Q2LD37	K1109_HUMAN	fragile site-associated protein	4127	Ser-rich.				regulation of cell growth|regulation of epithelial cell differentiation	integral to membrane|nucleus				ovary(8)|skin(2)|pancreas(1)|central_nervous_system(1)	12						GCCCTCTTGGCCGAAGTCGAC	0.433			NA											10	28					0	0	0.001855	0	0
CLCN3	1182	broad.mit.edu	37	4	170628234	170628234	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr4:170628234G>T	uc003isi.2	+	11	2475	c.1966G>T	c.(1966-1968)GAC>TAC	p.D656Y	CLCN3_uc003ish.2_Missense_Mutation_p.D656Y|CLCN3_uc011cjz.1_Missense_Mutation_p.D639Y|CLCN3_uc011cka.1_Missense_Mutation_p.D629Y|CLCN3_uc003isj.1_Missense_Mutation_p.D629Y	NM_001829	NP_001820	P51790	CLCN3_HUMAN	chloride channel 3 isoform b	656	Cytoplasmic (By similarity).				endosomal lumen acidification	cell surface|early endosome membrane|Golgi membrane|integral to membrane|late endosome membrane|transport vesicle membrane	antiporter activity|ATP binding|PDZ domain binding|protein heterodimerization activity|protein homodimerization activity|voltage-gated chloride channel activity			breast(2)|ovary(1)	3		Prostate(90;0.00601)|Renal(120;0.0183)		GBM - Glioblastoma multiforme(119;0.0233)|LUSC - Lung squamous cell carcinoma(193;0.131)		CCTGGCTGCTGACGTTATGAG	0.433			NA											20	50					9.95505e-16	1.49045e-15	0.002299	1	0
SLC6A18	348932	broad.mit.edu	37	5	1232907	1232907	+	Missense_Mutation	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:1232907T>C	uc003jby.1	+	3	466	c.343T>C	c.(343-345)TAC>CAC	p.Y115H		NM_182632	NP_872438	Q96N87	S6A18_HUMAN	solute carrier family 6, member 18	115	Extracellular (Potential).				cellular nitrogen compound metabolic process	integral to plasma membrane	amino acid transmembrane transporter activity|neurotransmitter:sodium symporter activity			ovary(1)	1	all_cancers(3;2.99e-16)|Lung NSC(6;8.55e-15)|all_lung(6;7.2e-14)|all_epithelial(6;1.76e-10)		Epithelial(17;0.000356)|all cancers(22;0.00124)|OV - Ovarian serous cystadenocarcinoma(19;0.00239)|Lung(60;0.185)			CAGCCTGTACTACAACACCAT	0.637			NA											23	43					0	0	0.001882	0	0
AMACR	23600	broad.mit.edu	37	5	34004754	34004754	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:34004754C>A	uc003jig.2	-	3	559	c.477G>T	c.(475-477)ATG>ATT	p.M159I	AMACR_uc003jih.2_Intron|AMACR_uc003jii.2_Missense_Mutation_p.M159I|AMACR_uc003jij.2_Missense_Mutation_p.M159I|AMACR_uc003jil.1_Missense_Mutation_p.M159I|AMACR_uc003jik.1_Intron	NM_014324	NP_055139	Q9UHK6	AMACR_HUMAN	alpha-methylacyl-CoA racemase isoform 1	159					bile acid biosynthetic process|fatty acid beta-oxidation using acyl-CoA oxidase	mitochondrion|peroxisomal matrix	alpha-methylacyl-CoA racemase activity				0						CCAGTGCACACATAAGGCCAC	0.463			NA											18	42					5.01169e-05	5.90266e-05	0.00499	1	0
PELO	53918	broad.mit.edu	37	5	52096562	52096562	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:52096562C>G	uc003jos.2	+	2	1319	c.334C>G	c.(334-336)CTG>GTG	p.L112V	ITGA1_uc003jov.2_Intron|ITGA1_uc003jou.2_Intron|PELO_uc003jot.1_Intron	NM_015946	NP_057030	Q9BRX2	PELO_HUMAN	pelota homolog	112					cell cycle|cell division|translation	cytoplasm|nucleus	endonuclease activity|metal ion binding|protein binding				0		Lung NSC(810;4.94e-05)|Breast(144;0.0848)				CCAGTTCACCCTGGCCAAGAA	0.597			NA											8	27					0	0	0.00308	0	0
ADAMTS6	11174	broad.mit.edu	37	5	64625273	64625273	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:64625273C>G	uc003jtp.2	-	9	1969	c.1155G>C	c.(1153-1155)AGG>AGC	p.R385S	ADAMTS6_uc003jto.2_RNA|ADAMTS6_uc003jtq.2_RNA|ADAMTS6_uc003jtr.1_Missense_Mutation_p.R6S	NM_197941	NP_922932	Q9UKP5	ATS6_HUMAN	ADAM metallopeptidase with thrombospondin type 1	385	Peptidase M12B.				proteolysis	proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding				0		Lung NSC(167;2.44e-06)|Prostate(74;0.014)|Ovarian(174;0.0549)|Breast(144;0.111)|Colorectal(97;0.235)		Lung(70;0.00942)		TGCTGCAGCTCCTTTCAGGCT	0.413			NA											25	9					0	0	0.008361	0	0
MRPS27	23107	broad.mit.edu	37	5	71616013	71616013	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:71616013C>A	uc003kbz.3	-	1	72	c.36G>T	c.(34-36)CTG>CTT	p.L12L	MRPS27_uc003kca.3_5'UTR|MRPS27_uc011cse.1_Silent_p.L12L|MRPS27_uc010iza.2_5'UTR|PTCD2_uc011csf.1_5'Flank|PTCD2_uc003kcb.2_5'Flank|PTCD2_uc003kcc.2_5'Flank|PTCD2_uc011csg.1_5'Flank|PTCD2_uc011csh.1_5'Flank|PTCD2_uc003kcd.2_5'Flank	NM_015084	NP_055899	Q92552	RT27_HUMAN	mitochondrial ribosomal protein S27	12						mitochondrion|ribosome					0		Lung NSC(167;0.00237)|Ovarian(174;0.0175)|Prostate(461;0.141)|Breast(144;0.198)		OV - Ovarian serous cystadenocarcinoma(47;1.46e-53)		CTTGCCGCGCCAGGAGCATCC	0.592			NA											22	8					4.26978e-12	5.98672e-12	0.00333	1	0
RAD50	10111	broad.mit.edu	37	5	131895051	131895051	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:131895051G>T	uc003kxi.2	+	2	592	c.205G>T	c.(205-207)GAT>TAT	p.D69Y	RAD50_uc003kxg.1_5'UTR|RAD50_uc003kxh.2_5'UTR	NM_005732	NP_005723	Q92878	RAD50_HUMAN	RAD50 homolog isoform 1	69					DNA duplex unwinding|double-strand break repair via homologous recombination|positive regulation of kinase activity|positive regulation of protein autophosphorylation|reciprocal meiotic recombination|regulation of mitotic recombination|telomere maintenance via telomerase	Mre11 complex|nuclear chromosome, telomeric region|nucleoplasm	ATP binding|DNA binding|nuclease activity|protein binding, bridging|zinc ion binding			lung(2)|ovary(1)|skin(1)	4		all_cancers(142;0.0368)|Breast(839;0.198)	KIRC - Kidney renal clear cell carcinoma(527;0.0186)|Kidney(363;0.0365)			ATTTGTACACGATCCCAAGGT	0.214			NA						Homologous_recombination					21	8					3.7963e-18	5.78173e-18	0.00333	1	0
PCDHGA1	56114	broad.mit.edu	37	5	140711076	140711076	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:140711076G>T	uc003lji.1	+	1	825	c.825G>T	c.(823-825)GGG>GGT	p.G275G	PCDHGA1_uc011dan.1_Silent_p.G275G	NM_018912	NP_061735	Q9Y5H4	PCDG1_HUMAN	protocadherin gamma subfamily A, 1 isoform 1	275	Cadherin 3.|Extracellular (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(1)|breast(1)|pancreas(1)	3			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GAGCCAATGGGGAAGTAACGT	0.438			NA											23	36					3.5997e-14	5.21268e-14	0.002299	1	0
PCDHGA2	56113	broad.mit.edu	37	5	140719315	140719315	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:140719315C>A	uc003ljk.1	+	1	962	c.777C>A	c.(775-777)ACC>ACA	p.T259T	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc011dao.1_Silent_p.T259T	NM_018915	NP_061738	Q9Y5H1	PCDG2_HUMAN	protocadherin gamma subfamily A, 2 isoform 1	259	Cadherin 3.|Extracellular (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			skin(2)|ovary(1)	3			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			TCGTGGGCACCCGGATACTCA	0.537			NA											57	93					3.07002e-29	5.08471e-29	0.00361	1	0
PCDHGA11	56105	broad.mit.edu	37	5	140802988	140802988	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:140802988G>T	uc003lkq.1	+	1	2452	c.2194G>T	c.(2194-2196)GGG>TGG	p.G732W	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc003ljk.1_Intron|PCDHGA3_uc003ljm.1_Intron|PCDHGA3_uc010jfx.1_Intron|PCDHGB1_uc003ljo.1_Intron|PCDHGA4_uc003ljq.1_Intron|PCDHGB2_uc003ljs.1_Intron|PCDHGA5_uc003lju.1_Intron|PCDHGB3_uc003ljw.1_Intron|PCDHGA6_uc003ljy.1_Intron|PCDHGA7_uc003lka.1_Intron|PCDHGB4_uc003lkc.1_Intron|PCDHGA8_uc003lkd.1_Intron|PCDHGB5_uc003lkf.1_Intron|PCDHGA9_uc003lkh.1_Intron|PCDHGB6_uc003lkj.1_Intron|PCDHGA10_uc003lkl.1_Intron|PCDHGB7_uc003lkn.1_Intron|PCDHGA11_uc003lko.1_Missense_Mutation_p.G732W|PCDHGA11_uc003lkp.1_Intron|PCDHGB8P_uc011daz.1_5'Flank	NM_018914	NP_061737	Q9Y5H2	PCDGB_HUMAN	protocadherin gamma subfamily A, 11 isoform 1	732	Cytoplasmic (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			TTCTGAAGGCGGGTTGGCAGG	0.587			NA											38	82					3.76114e-14	5.41685e-14	0.004289	1	0
ARHGAP26	23092	broad.mit.edu	37	5	142500655	142500655	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:142500655C>T	uc011dbj.1	+	18	1676	c.1641C>T	c.(1639-1641)ATC>ATT	p.I547I	ARHGAP26_uc003lmt.2_Silent_p.I547I|ARHGAP26_uc003lmw.2_Silent_p.I547I	NM_015071	NP_055886	Q9UNA1	RHG26_HUMAN	GTPase regulator associated with the focal	547	Rho-GAP.				actin cytoskeleton organization|filopodium assembly|nervous system development|small GTPase mediated signal transduction	cytoskeleton|cytosol|focal adhesion	cytoskeletal adaptor activity|Rho GTPase activator activity|SH3 domain binding			ovary(1)	1		all_hematologic(541;0.0416)	KIRC - Kidney renal clear cell carcinoma(527;0.000785)|Kidney(363;0.00101)			TAGCAGCCATCATGGACATCA	0.433			NA											41	85					0	0	0.006999	0	0
PDE6A	5145	broad.mit.edu	37	5	149247676	149247676	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:149247676G>T	uc003lrg.3	-	18	2301	c.2181C>A	c.(2179-2181)CCC>CCA	p.P727P		NM_000440	NP_000431	P16499	PDE6A_HUMAN	phosphodiesterase 6A	727					cytosolic calcium ion homeostasis|GMP metabolic process|platelet activation|signal transduction|visual perception	cytosol|plasma membrane	3',5'-cyclic-GMP phosphodiesterase activity|metal ion binding			ovary(1)|pancreas(1)	2			KIRC - Kidney renal clear cell carcinoma(527;0.000962)|Kidney(363;0.00147)			GCACCTCCCAGGGTTTGGTGA	0.567			NA											54	49					3.28156e-27	5.30251e-27	0.00361	1	0
ADAM19	8728	broad.mit.edu	37	5	156997967	156997967	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr5:156997967G>T	uc003lwz.2	-	2	180	c.116C>A	c.(115-117)CCC>CAC	p.P39H	ADAM19_uc003lww.1_5'UTR|ADAM19_uc011ddr.1_5'UTR	NM_033274	NP_150377	Q9H013	ADA19_HUMAN	ADAM metallopeptidase domain 19 preproprotein	39					proteolysis	integral to membrane	metalloendopeptidase activity|SH3 domain binding|zinc ion binding			ovary(3)|large_intestine(2)|upper_aerodigestive_tract(1)|pancreas(1)|skin(1)	8	Renal(175;0.00488)	Medulloblastoma(196;0.0359)|all_neural(177;0.14)	Kidney(164;0.000171)|KIRC - Kidney renal clear cell carcinoma(164;0.000785)			CTGCAGCTTGGGGCTGCCTTC	0.488			NA											45	41					2.51966e-14	3.66874e-14	0.00361	1	0
BCKDHB	594	broad.mit.edu	37	6	80878701	80878701	+	Missense_Mutation	SNP	A	A	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:80878701A>C	uc003pjd.2	+	5	654	c.587A>C	c.(586-588)CAT>CCT	p.H196P	BCKDHB_uc003pje.2_Missense_Mutation_p.H196P	NM_000056	NP_000047	P21953	ODBB_HUMAN	branched chain keto acid dehydrogenase E1 beta	196					branched chain family amino acid catabolic process	mitochondrial alpha-ketoglutarate dehydrogenase complex	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity|carboxy-lyase activity|protein binding				0		all_cancers(76;1.38e-05)|Acute lymphoblastic leukemia(125;1.15e-05)|all_hematologic(105;0.00118)|all_epithelial(107;0.0149)		BRCA - Breast invasive adenocarcinoma(397;0.0291)		GCTCTCTATCATTCTCAGAGT	0.433			NA											19	54					0	0	0.007413	0	0
LAMA4	3910	broad.mit.edu	37	6	112469529	112469529	+	Missense_Mutation	SNP	T	T	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:112469529T>G	uc003pvu.2	-	18	2492	c.2183A>C	c.(2182-2184)CAG>CCG	p.Q728P	LAMA4_uc003pvv.2_Missense_Mutation_p.Q721P|LAMA4_uc003pvt.2_Missense_Mutation_p.Q721P	NM_001105206	NP_001098676	Q16363	LAMA4_HUMAN	laminin, alpha 4 isoform 1 precursor	728	Domain II and I.				cell adhesion|regulation of cell adhesion|regulation of cell migration|regulation of embryonic development	laminin-1 complex	extracellular matrix structural constituent|receptor binding			ovary(4)|breast(2)|large_intestine(1)|central_nervous_system(1)|pancreas(1)	9		all_cancers(87;0.000196)|all_hematologic(75;0.000114)|all_epithelial(87;0.00542)|Colorectal(196;0.0209)		all cancers(137;0.0335)|OV - Ovarian serous cystadenocarcinoma(136;0.0578)|Epithelial(106;0.0748)|BRCA - Breast invasive adenocarcinoma(108;0.242)		CAGGCGCTGCTGGGCATCCCC	0.537			NA											6	18					0	0	0.001984	0	0
NT5DC1	221294	broad.mit.edu	37	6	116429571	116429571	+	Missense_Mutation	SNP	A	A	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:116429571A>C	uc003pwj.2	+	3	325	c.230A>C	c.(229-231)AAA>ACA	p.K77T	NT5DC1_uc003pwk.2_Missense_Mutation_p.K77T|NT5DC1_uc003pwl.2_5'Flank	NM_152729	NP_689942	Q5TFE4	NT5D1_HUMAN	5'-nucleotidase, cytosolic II-like 1 protein	77							hydrolase activity|metal ion binding				0		all_cancers(87;0.00367)|all_epithelial(87;0.00449)|Colorectal(196;0.0469)		all cancers(137;0.0327)|OV - Ovarian serous cystadenocarcinoma(136;0.0445)|GBM - Glioblastoma multiforme(226;0.0719)|Epithelial(106;0.112)		AACTTCCTTAAACTTGCAAAT	0.343	Colon(128;1440 1664 38087 41475 42869)		NA											26	6					0	0	0.008361	0	0
COL10A1	1300	broad.mit.edu	37	6	116442887	116442887	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:116442887G>T	uc003pwm.2	-	3	488	c.392C>A	c.(391-393)CCA>CAA	p.P131Q	NT5DC1_uc003pwj.2_Intron|NT5DC1_uc003pwk.2_Intron|NT5DC1_uc003pwl.2_Intron	NM_000493	NP_000484	Q03692	COAA1_HUMAN	type X collagen alpha 1 precursor	131	Triple-helical region.				skeletal system development	collagen	metal ion binding			central_nervous_system(1)	1		all_cancers(87;0.0176)|all_epithelial(87;0.0263)|Colorectal(196;0.234)		all cancers(137;0.0157)|OV - Ovarian serous cystadenocarcinoma(136;0.0325)|GBM - Glioblastoma multiforme(226;0.0446)|Epithelial(106;0.0711)		TAGGCCAGCTGGTCCAACATC	0.597			NA											20	5					0.000175454	0.000201279	0.001523	1	0
VGLL2	245806	broad.mit.edu	37	6	117586942	117586942	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:117586942G>A	uc003pxn.2	+	1	206	c.16G>A	c.(16-18)GTT>ATT	p.V6I	VGLL2_uc003pxo.2_Missense_Mutation_p.V6I	NM_182645	NP_872586	Q8N8G2	VGLL2_HUMAN	vestigial-like 2 isoform 1	6					transcription, DNA-dependent	nucleus				central_nervous_system(1)	1				GBM - Glioblastoma multiforme(226;0.0254)|all cancers(137;0.0676)|OV - Ovarian serous cystadenocarcinoma(136;0.0757)		CTGTCTGGATGTTATGTACCA	0.577			NA											25	8					0	0	0.004656	0	0
TAAR6	319100	broad.mit.edu	37	6	132892340	132892340	+	Nonsense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:132892340G>T	uc011eck.1	+	1	880	c.880G>T	c.(880-882)GAG>TAG	p.E294*		NM_175067	NP_778237	Q96RI8	TAAR6_HUMAN	trace amine associated receptor 6	294	Helical; Name=7; (Potential).					plasma membrane	G-protein coupled receptor activity			ovary(2)|skin(1)	3	Breast(56;0.112)			OV - Ovarian serous cystadenocarcinoma(155;0.006)|GBM - Glioblastoma multiforme(226;0.00792)		CTGTATTTATGAGATTTGCTG	0.353			NA											63	19					3.41413e-29	5.61953e-29	0.00361	1	0
TCP10	6953	broad.mit.edu	37	6	167789539	167789539	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr6:167789539C>A	uc003qvv.1	-	6	815	c.603G>T	c.(601-603)CCG>CCT	p.P201P	TCP10_uc003qvu.2_Silent_p.P201P|TCP10_uc003qvw.2_3'UTR	NM_004610	NP_004601	Q12799	TCP10_HUMAN	t-complex 10	228						cytosol				breast(1)	1		Breast(66;1.53e-05)|Ovarian(120;0.024)		OV - Ovarian serous cystadenocarcinoma(33;4.05e-20)|BRCA - Breast invasive adenocarcinoma(81;1.1e-06)|GBM - Glioblastoma multiforme(31;0.0386)		CGGAGTTTTGCGGACTTCGGG	0.612			NA											8	11					3.09899e-07	3.9673e-07	0.004482	1	0
ANKMY2	57037	broad.mit.edu	37	7	16666726	16666726	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:16666726G>A	uc003sti.2	-	3	410	c.210C>T	c.(208-210)GCC>GCT	p.A70A	ANKMY2_uc010ktz.2_RNA	NM_020319	NP_064715	Q8IV38	ANKY2_HUMAN	ankyrin repeat and MYND domain containing 2	70	ANK 1.					cilium	zinc ion binding			central_nervous_system(1)	1	Lung NSC(10;0.103)|all_lung(11;0.204)			UCEC - Uterine corpus endometrioid carcinoma (126;0.195)		AATTTACATCGGCTCCATGTC	0.358			NA											5	20					0	0	0.008291	0	0
NPC1L1	29881	broad.mit.edu	37	7	44573443	44573443	+	Missense_Mutation	SNP	G	G	A	rs149392392		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:44573443G>A	uc003tlb.2	-	7	2232	c.2176C>T	c.(2176-2178)CGG>TGG	p.R726W	NPC1L1_uc003tlc.2_Missense_Mutation_p.R726W|NPC1L1_uc011kbw.1_Missense_Mutation_p.R726W|NPC1L1_uc003tld.2_Intron	NM_013389	NP_037521	Q9UHC9	NPCL1_HUMAN	Niemann-Pick C1-like protein 1 isoform 1	726	SSD.|Cytoplasmic (Potential).				cholesterol biosynthetic process|intestinal cholesterol absorption|lipoprotein metabolic process	apical plasma membrane|cytoplasmic vesicle membrane|integral to membrane	hedgehog receptor activity|protein binding			ovary(3)|central_nervous_system(1)|skin(1)	5					Ezetimibe(DB00973)	CCAGGCCTCCGGGGCAGCCTC	0.652			NA											9	24					0	0	0.004482	0	0
C7orf64	84060	broad.mit.edu	37	7	92158138	92158138	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:92158138G>T	uc003ulz.2	+	1	52	c.11G>T	c.(10-12)AGC>ATC	p.S4I	PEX1_uc003uly.2_5'Flank|PEX1_uc011khr.1_5'Flank|PEX1_uc010ley.2_5'Flank|PEX1_uc011khs.1_5'Flank|C7orf64_uc011khu.1_Missense_Mutation_p.S4I|C7orf64_uc003uma.2_Missense_Mutation_p.S4I	NM_032120	NP_115496	Q5RL73	CG064_HUMAN	hypothetical protein LOC84060	4							nucleotide binding			ovary(2)	2						ATGGCGTCGAGCGGCGGGGAG	0.562			NA											8	20					5.18039e-06	6.53716e-06	0.00308	1	0
DYNC1I1	1780	broad.mit.edu	37	7	95726812	95726812	+	Silent	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:95726812T>C	uc003uoc.3	+	17	2122	c.1845T>C	c.(1843-1845)AAT>AAC	p.N615N	DYNC1I1_uc003uod.3_Silent_p.N598N|DYNC1I1_uc003uob.2_Silent_p.N578N|DYNC1I1_uc003uoe.3_Silent_p.N595N|DYNC1I1_uc010lfl.2_Silent_p.N604N	NM_004411	NP_004402	O14576	DC1I1_HUMAN	dynein, cytoplasmic 1, intermediate chain 1	615	WD 7.				vesicle transport along microtubule	condensed chromosome kinetochore|cytoplasmic dynein complex|microtubule|perinuclear region of cytoplasm|spindle pole|vesicle	microtubule binding|microtubule motor activity			ovary(3)|kidney(1)	4	all_cancers(62;9.39e-10)|all_epithelial(64;2.28e-09)|Lung NSC(181;0.165)|all_lung(186;0.191)		STAD - Stomach adenocarcinoma(171;0.0957)			TTCCCCACAATGATGAATGGA	0.453			NA											36	33					0	0	0.00874	0	0
CDHR3	222256	broad.mit.edu	37	7	105653351	105653351	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:105653351C>T	uc003vdl.3	+	9	1206	c.1098C>T	c.(1096-1098)GAC>GAT	p.D366D	CDHR3_uc003vdk.2_Silent_p.D14D|CDHR3_uc011kls.1_RNA|CDHR3_uc003vdm.3_Silent_p.D353D|CDHR3_uc011klt.1_Silent_p.D278D|CDHR3_uc003vdn.2_Silent_p.D83D	NM_152750	NP_689963	Q6ZTQ4	CDHR3_HUMAN	hypothetical protein LOC222256 precursor	366	Cadherin 4.|Extracellular (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(1)	1						TGCTTCTTGACCTAAACAAGT	0.468			NA											6	192					0	0	0.001168	0	0
PNPLA8	50640	broad.mit.edu	37	7	108155242	108155242	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:108155242C>A	uc003vff.1	-	4	1101	c.694G>T	c.(694-696)GAC>TAC	p.D232Y	PNPLA8_uc003vfg.1_RNA|PNPLA8_uc003vfh.1_Missense_Mutation_p.D232Y|PNPLA8_uc003vfi.1_Missense_Mutation_p.D132Y|PNPLA8_uc003vfj.1_Missense_Mutation_p.D232Y|PNPLA8_uc003vfk.1_Missense_Mutation_p.D132Y	NM_015723	NP_056538	Q9NP80	PLPL8_HUMAN	patatin-like phospholipase domain containing 8	232					fatty acid metabolic process|lipid catabolic process	endoplasmic reticulum membrane|Golgi membrane|integral to membrane|membrane fraction|perinuclear region of cytoplasm|peroxisomal membrane	ATP binding|calcium-independent phospholipase A2 activity|lysophospholipase activity			breast(2)	2						TCTGATTTGTCCCGGAAATGT	0.343			NA											22	19					1.64113e-05	1.98585e-05	0.001523	1	0
Unknown	0	broad.mit.edu	37	7	124116822	124116822	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:124116822C>A	uc011kod.1	+	1	398	c.398C>A	c.(397-399)CCT>CAT	p.P133H		NM_001085395	NP_001078864			RecName: Full=Putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 2;          Short=CTD phosphatase SSU72-like protein 2;          EC=3.1.3.16;												NA						ACCTTTCAGCCTGTGCACGTG	0.498			NA											7	42					0.00198382	0.00222759	0.001984	1	0
ZNF800	168850	broad.mit.edu	37	7	127013707	127013707	+	Silent	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:127013707T>A	uc003vlx.1	-	5	1946	c.1683A>T	c.(1681-1683)ATA>ATT	p.I561I	ZNF800_uc003vlw.1_Silent_p.I464I|ZNF800_uc003vly.1_Silent_p.I561I|ZNF800_uc010lla.2_Silent_p.I561I	NM_176814	NP_789784	Q2TB10	ZN800_HUMAN	zinc finger protein 800	561					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			ovary(1)	1						TAGGCTTTTTTATAGCTCTGA	0.373			NA											30	33					0	0	0.00632	0	0
CNTNAP2	26047	broad.mit.edu	37	7	146997361	146997361	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:146997361G>T	uc003weu.1	+	9	1993	c.1477G>T	c.(1477-1479)GGC>TGC	p.G493C		NM_014141	NP_054860	Q9UHC6	CNTP2_HUMAN	cell recognition molecule Caspr2 precursor	493	Extracellular (Potential).|Laminin G-like 2.				behavior|cell adhesion|clustering of voltage-gated potassium channels|limbic system development|neuron recognition|signal transduction|striatum development|superior temporal gyrus development|thalamus development|transmission of nerve impulse	axolemma|cell body fiber|dendrite|juxtaparanode region of axon|voltage-gated potassium channel complex	receptor binding			ovary(9)|central_nervous_system(1)|pancreas(1)	11	Melanoma(164;0.153)	all_cancers(3;3.51e-10)|all_epithelial(3;1.4e-05)|Myeloproliferative disorder(3;0.00452)|Lung NSC(3;0.0067)|all_lung(3;0.00794)	OV - Ovarian serous cystadenocarcinoma(82;0.0319)			AGTTAAAACTGGCGAGAAGTA	0.378			NA								HNSCC(39;0.1)			20	34					2.4624e-09	3.31236e-09	0.008871	1	0
SSPO	23145	broad.mit.edu	37	7	149512270	149512270	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:149512270G>T	uc010lpk.2	+	76	10590	c.10590G>T	c.(10588-10590)GGG>GGT	p.G3530G		NM_198455	NP_940857	A2VEC9	SSPO_HUMAN	SCO-spondin precursor	3530					cell adhesion	extracellular space	peptidase inhibitor activity				0	Melanoma(164;0.165)|Ovarian(565;0.177)		OV - Ovarian serous cystadenocarcinoma(82;0.00625)			TAGACTGCGGGGGTGGCCAGA	0.667			NA											20	28					1.85244e-09	2.50458e-09	0.00333	1	0
CSMD1	64478	broad.mit.edu	37	8	2796146	2796146	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:2796146C>A	uc011kwk.1	-	70	11049	c.10659G>T	c.(10657-10659)AGG>AGT	p.R3553S	CSMD1_uc011kwj.1_Missense_Mutation_p.R2867S|CSMD1_uc010lrg.2_Missense_Mutation_p.R1444S	NM_033225	NP_150094	Q96PZ7	CSMD1_HUMAN	CUB and Sushi multiple domains 1 precursor	3553	Cytoplasmic (Potential).					integral to membrane				breast(20)|large_intestine(5)	25		all_cancers(1;5.7e-41)|all_epithelial(1;2.54e-36)|Lung NSC(1;7.54e-11)|all_lung(1;3.2e-10)|Hepatocellular(1;3.78e-05)|Breast(1;0.000196)|Myeloproliferative disorder(4;0.000374)|Esophageal squamous(1;0.0157)|Ovarian(12;0.091)|Renal(68;0.144)|Colorectal(14;0.234)		all cancers(1;5.03e-41)|Epithelial(1;4.78e-31)|Lung(1;1.14e-14)|LUSC - Lung squamous cell carcinoma(1;2.34e-14)|GBM - Glioblastoma multiforme(1;4.49e-10)|Colorectal(4;1.18e-07)|OV - Ovarian serous cystadenocarcinoma(1;3.2e-07)|BRCA - Breast invasive adenocarcinoma(1;6.17e-07)|COAD - Colon adenocarcinoma(4;0.000539)|READ - Rectum adenocarcinoma(4;0.00896)|Kidney(5;0.00957)|KIRC - Kidney renal clear cell carcinoma(5;0.0689)		TTGTGTCAAACCTCACAGCCT	0.463			NA											9	5					5.68852e-11	7.85135e-11	0.004482	1	0
DEFA5	1670	broad.mit.edu	37	8	6914118	6914118	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:6914118C>A	uc003wra.1	-	1	142	c.102G>T	c.(100-102)CAG>CAT	p.Q34H		NM_021010	NP_066290	Q01523	DEF5_HUMAN	defensin, alpha 5 preproprotein	34					defense response to bacterium|defense response to fungus|killing of cells of other organism	extracellular space					0				COAD - Colon adenocarcinoma(149;0.0572)|READ - Rectum adenocarcinoma(644;0.121)		CTTCCCCAGACTGCTTCTGGG	0.537			NA											63	11					3.10202e-16	4.69734e-16	0.00361	1	0
ASH2L	9070	broad.mit.edu	37	8	37978623	37978623	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:37978623G>T	uc003xkt.3	+	10	1179	c.1121G>T	c.(1120-1122)AGA>ATA	p.R374I	ASH2L_uc011lbk.1_Missense_Mutation_p.R235I|ASH2L_uc003xku.3_Missense_Mutation_p.R280I|ASH2L_uc010lwa.2_Missense_Mutation_p.R280I	NM_004674	NP_004665	Q9UBL3	ASH2L_HUMAN	ash2-like isoform a	374	B30.2/SPRY.				hemopoiesis|histone H3-K4 methylation|positive regulation of cell proliferation|regulation of transcription, DNA-dependent|response to estrogen stimulus|transcription from RNA polymerase II promoter	Set1C/COMPASS complex	metal ion binding|protein binding|transcription regulatory region DNA binding			ovary(1)|lung(1)	2	Colorectal(12;0.000501)	Lung NSC(58;0.0295)|all_lung(54;0.0413)				GACCTCTACAGAGCCTGCTTG	0.483			NA									OREG0018719	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	34	40					1.47244e-24	2.35059e-24	0.00623	1	0
SLC10A5	347051	broad.mit.edu	37	8	82607198	82607198	+	Missense_Mutation	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:82607198T>C	uc011lfs.1	-	1	10	c.10A>G	c.(10-12)AAA>GAA	p.K4E		NM_001010893	NP_001010893	Q5PT55	NTCP5_HUMAN	solute carrier family 10 (sodium/bile acid	4						integral to membrane	bile acid:sodium symporter activity				0						ATAAAAAGTTTTCTAATCATT	0.313			NA											9	35					0	0	0.006214	0	0
WWP1	11059	broad.mit.edu	37	8	87386340	87386340	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:87386340C>G	uc003ydt.2	+	3	341	c.61C>G	c.(61-63)CAG>GAG	p.Q21E		NM_007013	NP_008944	Q9H0M0	WWP1_HUMAN	WW domain containing E3 ubiquitin protein ligase	21	C2.				central nervous system development|entry of virus into host cell|negative regulation of transcription, DNA-dependent|protein ubiquitination involved in ubiquitin-dependent protein catabolic process|signal transduction	cytoplasm|nucleus|plasma membrane|ubiquitin ligase complex	protein binding|ubiquitin-protein ligase activity			lung(1)|liver(1)	2						GTTGCAGTTACAGGTAACTGG	0.343			NA											28	97					0	0	0.001786	0	0
WWP1	11059	broad.mit.edu	37	8	87393038	87393038	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:87393038A>G	uc003ydt.2	+	4	434	c.154A>G	c.(154-156)AAA>GAA	p.K52E	WWP1_uc010mai.2_5'UTR	NM_007013	NP_008944	Q9H0M0	WWP1_HUMAN	WW domain containing E3 ubiquitin protein ligase	52	C2.				central nervous system development|entry of virus into host cell|negative regulation of transcription, DNA-dependent|protein ubiquitination involved in ubiquitin-dependent protein catabolic process|signal transduction	cytoplasm|nucleus|plasma membrane|ubiquitin ligase complex	protein binding|ubiquitin-protein ligase activity			lung(1)|liver(1)	2						AGAAATTACGAAAACAGCAAA	0.343			NA											5	30					0	0	0.001168	0	0
CNBD1	168975	broad.mit.edu	37	8	87878811	87878811	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:87878811A>T	uc003ydy.2	+	1	136	c.88A>T	c.(88-90)AAC>TAC	p.N30Y		NM_173538	NP_775809	Q8NA66	CNBD1_HUMAN	cyclic nucleotide binding domain containing 1	30										ovary(3)	3						CAGTATACCAAGTGAGTGGGA	0.438			NA											8	18					0	0	0.006214	0	0
SLC25A32	81034	broad.mit.edu	37	8	104420013	104420013	+	Splice_Site	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:104420013C>A	uc003yll.2	-	2	458	c.155_splice	c.e2-1	p.V52_splice	SLC25A32_uc011lhr.1_Splice_Site	NM_030780	NP_110407	Q9H2D1	MFTC_HUMAN	solute carrier family 25, member 32						folic acid metabolic process|mitochondrial transport	integral to membrane|mitochondrial inner membrane	binding|folic acid transporter activity			ovary(1)	1			OV - Ovarian serous cystadenocarcinoma(57;2.79e-06)|STAD - Stomach adenocarcinoma(118;0.197)		Folic Acid(DB00158)	CCATCACTCACTGCATCAAGG	0.373			NA											50	39					7.05377e-20	1.09956e-19	0.00361	1	0
CSMD3	114788	broad.mit.edu	37	8	114326875	114326875	+	Nonsense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:114326875G>T	uc003ynu.2	-	2	485	c.326C>A	c.(325-327)TCA>TAA	p.S109*	CSMD3_uc003ynt.2_Nonsense_Mutation_p.S69*|CSMD3_uc011lhx.1_Nonsense_Mutation_p.S109*|CSMD3_uc010mcx.1_Nonsense_Mutation_p.S109*|CSMD3_uc003ynx.3_Nonsense_Mutation_p.S109*	NM_198123	NP_937756	Q7Z407	CSMD3_HUMAN	CUB and Sushi multiple domains 3 isoform 1	109	Extracellular (Potential).|CUB 1.					integral to membrane|plasma membrane				ovary(21)|lung(11)|skin(11)|kidney(8)|large_intestine(6)|upper_aerodigestive_tract(2)|central_nervous_system(2)|urinary_tract(1)|breast(1)	63						TAGAGCAAATGACTGAAAAAC	0.353			NA								HNSCC(6;0.00088)|TCGA Ovarian(7;0.080)			28	65					2.44723e-14	3.58296e-14	0.004656	1	0
TRPS1	7227	broad.mit.edu	37	8	116631998	116631998	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:116631998G>T	uc003ynz.2	-	2	747	c.288C>A	c.(286-288)AAC>AAA	p.N96K	TRPS1_uc011lhy.1_Missense_Mutation_p.N100K|TRPS1_uc003yny.2_Missense_Mutation_p.N109K|TRPS1_uc010mcy.2_Missense_Mutation_p.N96K	NM_014112	NP_054831	Q9UHF7	TRPS1_HUMAN	zinc finger transcription factor TRPS1	96					negative regulation of transcription from RNA polymerase II promoter|NLS-bearing substrate import into nucleus|regulation of chondrocyte differentiation|skeletal system development|transcription from RNA polymerase II promoter	nucleus	protein binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(2)|skin(2)|pancreas(1)|lung(1)|kidney(1)	7	all_cancers(13;5.44e-23)|all_epithelial(1;2.14e-27)|Lung NSC(37;2.55e-05)|Ovarian(258;0.0219)		Epithelial(1;9.78e-37)|all cancers(1;3.14e-31)|BRCA - Breast invasive adenocarcinoma(1;2.56e-12)			AGGAGGGAAAGTTTCCTCCCT	0.478			NA							Langer-Giedion_syndrome				17	122					5.3912e-06	6.77094e-06	0.006122	1	0
FAM83A	84985	broad.mit.edu	37	8	124195334	124195334	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:124195334T>A	uc003ypv.2	+	2	2252	c.238T>A	c.(238-240)TGT>AGT	p.C80S	FAM83A_uc003ypw.2_Missense_Mutation_p.C80S|FAM83A_uc003ypy.2_Missense_Mutation_p.C80S|FAM83A_uc003ypx.2_Missense_Mutation_p.C80S|FAM83A_uc003ypz.2_Missense_Mutation_p.C80S	NM_032899	NP_116288	Q86UY5	FA83A_HUMAN	hypothetical protein LOC84985 isoform a	80										ovary(3)|skin(1)	4	Lung NSC(37;1.55e-09)|Ovarian(258;0.0205)		STAD - Stomach adenocarcinoma(47;0.00527)			GGAGCCCCCGTGTCCCCCAGA	0.662			NA											41	40					0	0	0.00874	0	0
ZC3H3	23144	broad.mit.edu	37	8	144557696	144557696	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:144557696C>T	uc003yyd.2	-	5	1804	c.1775G>A	c.(1774-1776)GGC>GAC	p.G592D		NM_015117	NP_055932	Q8IXZ2	ZC3H3_HUMAN	zinc finger CCCH-type containing 3	592					mRNA polyadenylation|poly(A)+ mRNA export from nucleus|regulation of mRNA export from nucleus	nucleus	nucleic acid binding|zinc ion binding			skin(1)	1	all_cancers(97;8.64e-11)|all_epithelial(106;6.43e-09)|Lung NSC(106;0.000202)|all_lung(105;0.000548)|Ovarian(258;0.0212)|Acute lymphoblastic leukemia(118;0.155)		Colorectal(110;0.107)|BRCA - Breast invasive adenocarcinoma(115;0.107)			CCAAGGGGAGCCCGGTTGGGC	0.632			NA											7	43					0	0	0.00308	0	0
DOCK8	81704	broad.mit.edu	37	9	328110	328110	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:328110A>G	uc003zgf.2	+	9	1095	c.983A>G	c.(982-984)CAG>CGG	p.Q328R	DOCK8_uc011lls.1_Missense_Mutation_p.Q328R|DOCK8_uc010mgu.2_5'UTR|DOCK8_uc010mgv.2_Missense_Mutation_p.Q260R|DOCK8_uc003zgg.2_Missense_Mutation_p.Q260R|DOCK8_uc003zgh.2_RNA	NM_203447	NP_982272	Q8NF50	DOCK8_HUMAN	dedicator of cytokinesis 8	328	DHR-1.				blood coagulation	cytosol	GTP binding|GTPase binding|guanyl-nucleotide exchange factor activity			ovary(3)|central_nervous_system(3)	6		all_cancers(5;2.13e-17)|all_epithelial(5;2.15e-12)|all_lung(10;6.69e-11)|Lung NSC(10;1.08e-10)|Acute lymphoblastic leukemia(5;0.000242)|all_hematologic(5;0.00317)|Breast(48;0.0151)|Prostate(43;0.128)		all cancers(5;9.3e-07)|GBM - Glioblastoma multiforme(5;2.41e-06)|Epithelial(6;0.00557)|Lung(218;0.00942)		GCATCAAGTCAGGCGAGATCT	0.468			NA											9	18					0	0	0.004482	0	0
BNC2	54796	broad.mit.edu	37	9	16419339	16419339	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:16419339C>A	uc003zml.2	-	7	3088	c.2948G>T	c.(2947-2949)GGC>GTC	p.G983V	BNC2_uc011lmw.1_Missense_Mutation_p.G888V|BNC2_uc003zmm.2_3'UTR|BNC2_uc011lmv.1_3'UTR|BNC2_uc003zmj.2_3'UTR|BNC2_uc003zmk.2_RNA|BNC2_uc003zmi.2_Missense_Mutation_p.G770V	NM_017637	NP_060107	Q6ZN30	BNC2_HUMAN	basonuclin 2	983					regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|nucleus|plasma membrane	zinc ion binding			ovary(2)|central_nervous_system(1)	3				GBM - Glioblastoma multiforme(50;9.01e-08)		CTCATCGCTGCCTGCGTCGGA	0.617			NA											15	22					1.49906e-05	1.82225e-05	0.00245	1	0
IFNE	338376	broad.mit.edu	37	9	21481120	21481120	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:21481120G>A	uc003zpg.2	-	1	1193	c.574C>T	c.(574-576)CCC>TCC	p.P192S	LOC554202_uc003zpe.2_Intron|LOC554202_uc003zpf.2_Intron	NM_176891	NP_795372	Q86WN2	IFNE_HUMAN	interferon, epsilon precursor	192					defense response|response to virus	extracellular space	cytokine activity|cytokine receptor binding				0						TCGTTCAAGGGTCTTCCTTGT	0.478			NA											34	48					0	0	0.003755	0	0
TAF1L	138474	broad.mit.edu	37	9	32635389	32635389	+	Silent	SNP	C	C	T	rs55895024	byFrequency	TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:32635389C>T	uc003zrg.1	-	1	279	c.189G>A	c.(187-189)AAG>AAA	p.K63K	uc003zrh.1_Intron	NM_153809	NP_722516	Q8IZX4	TAF1L_HUMAN	TBP-associated factor RNA polymerase 1-like	63					male meiosis|positive regulation of transcription, DNA-dependent|regulation of transcription from RNA polymerase II promoter|transcription initiation, DNA-dependent	transcription factor TFIID complex	DNA binding|histone acetyltransferase activity|protein serine/threonine kinase activity|TBP-class protein binding			lung(8)|skin(6)|central_nervous_system(4)|large_intestine(3)|ovary(2)|stomach(1)|breast(1)|pancreas(1)	26			LUSC - Lung squamous cell carcinoma(29;0.0181)	GBM - Glioblastoma multiforme(74;0.00301)		CTGCCAAGTGCTTCTTACACT	0.547			NA											4	93					0	0	0.000248	0	0
TRPM6	140803	broad.mit.edu	37	9	77411743	77411743	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:77411743A>G	uc004ajl.1	-	18	2543	c.2305T>C	c.(2305-2307)TCA>CCA	p.S769P	TRPM6_uc004ajk.1_Missense_Mutation_p.S764P|TRPM6_uc010mpb.1_RNA|TRPM6_uc010mpc.1_Intron|TRPM6_uc010mpd.1_Intron|TRPM6_uc010mpe.1_Intron|TRPM6_uc004ajm.1_Missense_Mutation_p.S147P	NM_017662	NP_060132	Q9BX84	TRPM6_HUMAN	transient receptor potential cation channel,	769	Extracellular (Potential).				response to toxin	integral to membrane	ATP binding|calcium channel activity|metal ion binding|protein binding|protein serine/threonine kinase activity			lung(3)|stomach(2)|haematopoietic_and_lymphoid_tissue(1)|central_nervous_system(1)|skin(1)	8						GGAACATGTGACATCTCAGCT	0.378			NA											14	51					0	0	0.001855	0	0
PRUNE2	158471	broad.mit.edu	37	9	79323992	79323992	+	Silent	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:79323992G>A	uc010mpk.2	-	8	3322	c.3198C>T	c.(3196-3198)TCC>TCT	p.S1066S		NM_015225	NP_056040	Q8WUY3	PRUN2_HUMAN	prune homolog 2	1066					apoptosis|G1 phase|induction of apoptosis	cytoplasm	metal ion binding|pyrophosphatase activity				0						CATCCTCCATGGAGATATTCT	0.453			NA											18	34					0	0	0.00499	0	0
KIAA0368	23392	broad.mit.edu	37	9	114246668	114246668	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:114246668A>G	uc004bfe.1	-	2	245	c.245T>C	c.(244-246)TTT>TCT	p.F82S	KIAA0368_uc010muc.1_5'Flank	NM_001080398	NP_001073867			KIAA0368 protein												0						GGACTCAGAAAAGTAGAGCCG	0.697			NA											6	13					0	0	0.004482	0	0
PAPPA	5069	broad.mit.edu	37	9	119065114	119065114	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:119065114G>A	uc004bjn.2	+	10	3413	c.3032G>A	c.(3031-3033)TGT>TAT	p.C1011Y	PAPPA_uc011lxp.1_Missense_Mutation_p.C706Y|PAPPA_uc011lxq.1_Missense_Mutation_p.C386Y	NM_002581	NP_002572	Q13219	PAPP1_HUMAN	pregnancy-associated plasma protein A	1011					cell differentiation|female pregnancy	cytoplasm|extracellular region|membrane	metalloendopeptidase activity|zinc ion binding			ovary(4)|skin(4)|pancreas(1)	9						ATTAAGGACTGTGGTGTCTAC	0.488			NA											4	24					0	0	0.000248	0	0
CERCAM	51148	broad.mit.edu	37	9	131193497	131193497	+	Missense_Mutation	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:131193497C>T	uc004buz.3	+	9	1516	c.1118C>T	c.(1117-1119)CCG>CTG	p.P373L	CERCAM_uc004buy.1_Missense_Mutation_p.P295L|CERCAM_uc010mxz.2_Missense_Mutation_p.P295L|CERCAM_uc010mya.1_Missense_Mutation_p.P214L	NM_016174	NP_057258	Q5T4B2	GT253_HUMAN	cerebral endothelial cell adhesion molecule 1	373					cellular component movement|leukocyte cell-cell adhesion|lipopolysaccharide biosynthetic process	endoplasmic reticulum lumen|plasma membrane				pancreas(1)	1						GACCTGCTCCCGGGCTACCAG	0.642			NA											28	116					0	0	0.007291	0	0
ADAMTS13	11093	broad.mit.edu	37	9	136307772	136307772	+	Silent	SNP	C	C	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr9:136307772C>T	uc004cdv.3	+	18	2586	c.2142C>T	c.(2140-2142)GCC>GCT	p.A714A	ADAMTS13_uc004cdp.3_Intron|ADAMTS13_uc004cdt.1_Silent_p.A714A|ADAMTS13_uc004cdu.1_Silent_p.A683A|ADAMTS13_uc004cdw.3_Silent_p.A714A|ADAMTS13_uc004cdx.3_Silent_p.A683A|ADAMTS13_uc004cdy.1_Intron|ADAMTS13_uc004cdz.3_Silent_p.A384A|ADAMTS13_uc004cds.1_Silent_p.A239A|ADAMTS13_uc004cdr.1_Intron	NM_139025	NP_620594	Q76LX8	ATS13_HUMAN	ADAM metallopeptidase with thrombospondin type 1	714	TSP type-1 2.				cell-matrix adhesion|glycoprotein metabolic process|integrin-mediated signaling pathway|peptide catabolic process|platelet activation|protein processing|proteolysis	cell surface|proteinaceous extracellular matrix	calcium ion binding|integrin binding|metalloendopeptidase activity|zinc ion binding			central_nervous_system(2)|skin(2)|ovary(1)|kidney(1)	6				OV - Ovarian serous cystadenocarcinoma(145;1.06e-07)|Epithelial(140;1.28e-06)|all cancers(34;1.46e-05)		TGGACCAGGCCAGGAAGGAGT	0.662			NA											12	69					0	0	0.001368	0	0
SFRS17A	8227	broad.mit.edu	37	X	1712374	1712374	+	Missense_Mutation	SNP	G	G	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:1712374G>C	uc004cqa.2	+	2	215	c.19G>C	c.(19-21)GTG>CTG	p.V7L	SFRS17A_uc010ncx.1_Missense_Mutation_p.V7L|SFRS17A_uc004cqb.2_RNA|ASMT_uc004cqd.2_5'Flank	NM_005088	NP_005079	Q02040	AK17A_HUMAN	DNA segment on chromosome X and Y (unique) 155	7					B cell activation|mRNA processing|regulation of transcription, DNA-dependent|RNA splicing|signal transduction	nuclear speck|spliceosomal complex	nucleotide binding|protein binding|RNA binding				0		all_cancers(21;4.28e-07)|all_epithelial(21;2.07e-08)|all_lung(23;2.81e-05)|Lung NSC(23;0.000693)|Lung SC(21;0.122)				GGCTACCATCGTGCACGACAC	0.622			NA											60	131					0	0	0.00361	0	0
TBL1X	6907	broad.mit.edu	37	X	9683028	9683028	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:9683028C>A	uc010ndq.2	+	17	2060	c.1692C>A	c.(1690-1692)AGC>AGA	p.S564R	TBL1X_uc004csq.3_Missense_Mutation_p.S513R|TBL1X_uc010ndr.2_Missense_Mutation_p.S513R|TBL1X_uc004csr.2_Missense_Mutation_p.S564R|TBL1X_uc004css.2_Missense_Mutation_p.S515R	NM_001139466	NP_001132938	O60907	TBL1X_HUMAN	transducin beta-like 1X isoform a	564	WD 8.				canonical Wnt receptor signaling pathway|cellular lipid metabolic process|negative regulation of transcription from RNA polymerase II promoter|positive regulation of transcription from RNA polymerase II promoter|proteasomal ubiquitin-dependent protein catabolic process|sensory perception of sound|transcription, DNA-dependent	spindle microtubule|transcriptional repressor complex	beta-catenin binding|histone binding|protein C-terminus binding|protein domain specific binding|transcription corepressor activity|transcription factor binding|transcription regulatory region DNA binding			ovary(1)	1		Hepatocellular(5;0.000888)				TGGGTGCCAGCGCGTCCGACG	0.597			NA											6	19					8.12818e-05	9.44723e-05	0.001984	1	0
RAI2	10742	broad.mit.edu	37	X	17819428	17819428	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:17819428G>T	uc004cyf.2	-	3	1273	c.703C>A	c.(703-705)CCT>ACT	p.P235T	RAI2_uc004cyg.2_Missense_Mutation_p.P235T|RAI2_uc010nfa.2_Missense_Mutation_p.P235T|RAI2_uc004cyh.3_Missense_Mutation_p.P235T|RAI2_uc011miy.1_Missense_Mutation_p.P185T	NM_021785	NP_068557	Q9Y5P3	RAI2_HUMAN	retinoic acid induced 2	235	Pro-rich.				embryo development					ovary(1)|breast(1)	2	Hepatocellular(33;0.183)					ACGATTACAGGATACGGCACC	0.607			NA											15	51					1.49906e-05	1.82225e-05	0.00245	1	0
FAM48B2	170067	broad.mit.edu	37	X	24330328	24330328	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:24330328G>T	uc011mjw.1	-	1	1105	c.1105C>A	c.(1105-1107)CCA>ACA	p.P369T		NM_001136233	NP_001129705	P0C7V6	F48B2_HUMAN	family with sequence similarity 48, member B2	369											0						TTTTTACGTGGCCGTATTTTA	0.537			NA											12	44					7.93312e-07	1.01071e-06	0.00245	1	0
DMD	1756	broad.mit.edu	37	X	32380967	32380967	+	Missense_Mutation	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:32380967G>T	uc004dda.1	-	37	5507	c.5263C>A	c.(5263-5265)CCC>ACC	p.P1755T	DMD_uc004dcw.2_Missense_Mutation_p.P411T|DMD_uc004dcx.2_Missense_Mutation_p.P414T|DMD_uc004dcz.2_Missense_Mutation_p.P1632T|DMD_uc004dcy.1_Missense_Mutation_p.P1751T|DMD_uc004ddb.1_Missense_Mutation_p.P1747T|DMD_uc010ngo.1_Intron	NM_004006	NP_003997	P11532	DMD_HUMAN	dystrophin Dp427m isoform	1755	Spectrin 12.|Interaction with SYNM (By similarity).				muscle filament sliding|peptide biosynthetic process	cell surface|costamere|cytoskeleton|cytosol|dystrophin-associated glycoprotein complex|sarcolemma	actin binding|dystroglycan binding|nitric-oxide synthase binding|protein binding|structural constituent of cytoskeleton|structural constituent of muscle|zinc ion binding			ovary(3)|pancreas(2)|large_intestine(1)	6		all_cancers(2;1.22e-16)|Acute lymphoblastic leukemia(2;4.65e-06)|all_hematologic(2;0.00108)|all_epithelial(3;0.00626)|all_neural(2;0.0189)|all_lung(315;0.182)|Glioma(3;0.203)				GAGATTTGGGGCTCTACTAAT	0.473			NA											46	40					2.81731e-22	4.41767e-22	0.00361	1	0
FAM47B	170062	broad.mit.edu	37	X	34961678	34961679	+	Nonsense_Mutation	DNP	GC	GC	TA			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	GC	GC	-	-	GC	GC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:34961678_34961679GC>TA	uc004ddi.1	+	1	748_749	c.730_731GC>TA	c.(730-732)GCA>TAA	p.A244*		NM_152631	NP_689844	Q8NA70	FA47B_HUMAN	hypothetical protein LOC170062	244	Pro-rich.									ovary(3)|breast(1)	4						AGAGACTCGCGCATCTCATCTC	0.639			NA											22	79					0	0	0.004672	0	0
FAM47B	170062	broad.mit.edu	37	X	34961693	34961693	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:34961693G>A	uc004ddi.1	+	1	763	c.745G>A	c.(745-747)GTG>ATG	p.V249M		NM_152631	NP_689844	Q8NA70	FA47B_HUMAN	hypothetical protein LOC170062	249	Pro-rich.									ovary(3)|breast(1)	4						TCATCTCCGCGTGGATCCTCC	0.627			NA											19	80					0	0	0.001882	0	0
CFP	5199	broad.mit.edu	37	X	47487635	47487635	+	Missense_Mutation	SNP	G	G	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:47487635G>A	uc004dig.3	-	3	395	c.269C>T	c.(268-270)TCG>TTG	p.S90L	CFP_uc004dih.2_Missense_Mutation_p.S90L|CFP_uc004dii.1_Missense_Mutation_p.S26L|CFP_uc010nhu.2_Missense_Mutation_p.S90L	NM_001145252	NP_001138724	P27918	PROP_HUMAN	complement factor properdin precursor	90	TSP type-1 1.				complement activation, alternative pathway|defense response to bacterium	extracellular space				breast(2)|lung(1)	3						GCACGTCACCGAACAGGGGGC	0.627			NA											4	22					0	0	0.000248	0	0
TRO	7216	broad.mit.edu	37	X	54956321	54956321	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:54956321C>A	uc004dtq.2	+	12	3271	c.3164C>A	c.(3163-3165)ACC>AAC	p.T1055N	TRO_uc004dts.2_Intron|TRO_uc004dtr.2_Intron|TRO_uc004dtt.2_Intron|TRO_uc004dtu.2_Intron|TRO_uc004dtv.2_Intron|TRO_uc011mok.1_Missense_Mutation_p.T586N|TRO_uc004dtw.2_Missense_Mutation_p.T658N|TRO_uc004dtx.2_Missense_Mutation_p.T438N	NM_001039705	NP_001034794	Q12816	TROP_HUMAN	trophinin isoform 5	1055	62 X 10 AA approximate tandem repeats.|25.				embryo implantation|homophilic cell adhesion	integral to plasma membrane				ovary(1)	1						TCTCCCAGCACCAGTGCTGGC	0.562			NA											18	45					5.03518e-11	6.98599e-11	0.007413	1	0
MAGEH1	28986	broad.mit.edu	37	X	55478884	55478884	+	Missense_Mutation	SNP	A	A	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:55478884A>G	uc004dum.2	+	1	347	c.77A>G	c.(76-78)CAG>CGG	p.Q26R		NM_014061	NP_054780	Q9H213	MAGH1_HUMAN	melanoma antigen, family H, 1 protein	26	MAGE.				apoptosis					ovary(1)|lung(1)|central_nervous_system(1)|skin(1)	4						CGCAAAATCCAGGCCTCAGAG	0.632			NA											7	13					0	0	0.00308	0	0
NLGN3	54413	broad.mit.edu	37	X	70373331	70373331	+	Silent	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:70373331C>A	uc004dzd.1	+	3	722	c.522C>A	c.(520-522)TCC>TCA	p.S174S	NLGN3_uc010nlb.1_Intron|NLGN3_uc004dzb.2_Silent_p.S154S|NLGN3_uc004dzc.2_Silent_p.S37S|NLGN3_uc011mps.1_Intron|NLGN3_uc004dze.2_5'UTR|NLGN3_uc011mpr.1_Intron	NM_018977	NP_061850	Q9NZ94	NLGN3_HUMAN	neuroligin 3	174	Extracellular (Potential).				neuron cell-cell adhesion|positive regulation of synaptogenesis|receptor-mediated endocytosis|social behavior|synapse assembly	cell surface|endocytic vesicle|integral to plasma membrane|synapse	neurexin binding|receptor activity			ovary(1)	1	Renal(35;0.156)					CCCCAGGATCCGGCGCTAAGA	0.557	Esophageal Squamous(103;760 1488 16849 22250 40351)		NA											6	16					1.06961e-07	1.38267e-07	0.00308	1	0
PHKA1	5255	broad.mit.edu	37	X	71840619	71840619	+	Missense_Mutation	SNP	T	T	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:71840619T>A	uc004eax.3	-	19	2394	c.2093A>T	c.(2092-2094)GAC>GTC	p.D698V	PHKA1_uc004eay.3_Missense_Mutation_p.D698V|PHKA1_uc011mqi.1_Intron	NM_002637	NP_002628	P46020	KPB1_HUMAN	phosphorylase kinase, alpha 1 (muscle) isoform	698					glucose metabolic process|glycogen catabolic process	cytosol|plasma membrane	calmodulin binding|glucan 1,4-alpha-glucosidase activity|phosphorylase kinase activity			ovary(3)|skin(1)	4	Renal(35;0.156)					GGACATTAAGTCGCAGGTTGT	0.537			NA											11	43					0	0	0.008291	0	0
BRWD3	254065	broad.mit.edu	37	X	79947425	79947425	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:79947425C>A	uc004edt.2	-	30	3641	c.3378G>T	c.(3376-3378)TTG>TTT	p.L1126F	BRWD3_uc010nmi.1_RNA|BRWD3_uc004edo.2_Missense_Mutation_p.L722F|BRWD3_uc004edp.2_Missense_Mutation_p.L955F|BRWD3_uc004edq.2_Missense_Mutation_p.L722F|BRWD3_uc010nmj.1_Missense_Mutation_p.L722F|BRWD3_uc004edr.2_Missense_Mutation_p.L796F|BRWD3_uc004eds.2_Missense_Mutation_p.L722F|BRWD3_uc004edu.2_Missense_Mutation_p.L796F|BRWD3_uc004edv.2_Missense_Mutation_p.L722F|BRWD3_uc004edw.2_Missense_Mutation_p.L722F|BRWD3_uc004edx.2_Missense_Mutation_p.L722F|BRWD3_uc004edy.2_Missense_Mutation_p.L722F|BRWD3_uc004edz.2_Missense_Mutation_p.L796F|BRWD3_uc004eea.2_Missense_Mutation_p.L796F|BRWD3_uc004eeb.2_Missense_Mutation_p.L722F	NM_153252	NP_694984	Q6RI45	BRWD3_HUMAN	bromodomain and WD repeat domain containing 3	1126										ovary(4)	4						GCAAAGCAGTCAATTCTTCCT	0.418			NA											8	18					1.06961e-07	1.38267e-07	0.00308	1	0
PCDH11X	27328	broad.mit.edu	37	X	91873896	91873896	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:91873896C>A	uc004efk.1	+	7	4846	c.4001C>A	c.(4000-4002)CCG>CAG	p.P1334Q	PCDH11X_uc004efl.1_Missense_Mutation_p.P1324Q|PCDH11X_uc004efo.1_Missense_Mutation_p.P1297Q|PCDH11X_uc010nmv.1_3'UTR|PCDH11X_uc004efm.1_Missense_Mutation_p.P1326Q|PCDH11X_uc004efn.1_Missense_Mutation_p.P1316Q	NM_032968	NP_116750	Q9BZA7	PC11X_HUMAN	protocadherin 11 X-linked isoform c	1334	Cytoplasmic (Potential).				homophilic cell adhesion	integral to plasma membrane	calcium ion binding			large_intestine(2)	2						CAGGCCAGACCGTCCAGAGGT	0.378	NSCLC(38;925 1092 2571 38200 45895)		NA											25	124					4.26978e-12	5.98672e-12	0.00333	1	0
SYTL4	94121	broad.mit.edu	37	X	99956241	99956241	+	Missense_Mutation	SNP	C	C	G			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:99956241C>G	uc004egd.3	-	6	767	c.411G>C	c.(409-411)AGG>AGC	p.R137S	SYTL4_uc010nnc.2_Missense_Mutation_p.R137S|SYTL4_uc004ege.3_Missense_Mutation_p.R137S|SYTL4_uc004egf.3_Missense_Mutation_p.R137S|SYTL4_uc004egg.3_Missense_Mutation_p.R137S	NM_080737	NP_542775	Q96C24	SYTL4_HUMAN	synaptotagmin-like 4	137					exocytosis|intracellular protein transport	extrinsic to membrane|plasma membrane|synaptic vesicle|transport vesicle membrane	neurexin binding|phospholipid binding|Rab GTPase binding|transporter activity|zinc ion binding			ovary(2)	2					Insulin Glargine recombinant(DB00047)|Insulin Lyspro recombinant(DB00046)|Insulin recombinant(DB00030)|Insulin, porcine(DB00071)	GCAGGGACATCCTGATTATCT	0.453			NA											7	28					0	0	0.00308	0	0
PAK3	5063	broad.mit.edu	37	X	110395675	110395675	+	Silent	SNP	G	G	C	rs143591118		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:110395675G>C	uc004epa.2	+	5	540	c.513G>C	c.(511-513)TCG>TCC	p.S171S	PAK3_uc010npt.1_Silent_p.S156S|PAK3_uc010npu.1_Silent_p.S156S|PAK3_uc004eoy.1_5'UTR|PAK3_uc004eoz.2_Silent_p.S156S|PAK3_uc011mst.1_RNA|PAK3_uc010npv.1_Silent_p.S192S|PAK3_uc010npw.1_Silent_p.S177S	NM_001128173	NP_001121645	O75914	PAK3_HUMAN	p21-activated kinase 3 isoform d	171	Linker.				multicellular organismal development		ATP binding|metal ion binding|protein serine/threonine kinase activity|SH3 domain binding			lung(6)|ovary(3)|large_intestine(1)	10						CCCATCCTTCGGTAAGTGAAA	0.333			NA								TSP Lung(19;0.15)			9	33					0	0	0.006214	0	0
PAK3	5063	broad.mit.edu	37	X	110439078	110439078	+	Missense_Mutation	SNP	A	A	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:110439078A>T	uc004epa.2	+	12	1191	c.1164A>T	c.(1162-1164)CAA>CAT	p.Q388H	PAK3_uc010npt.1_Missense_Mutation_p.Q373H|PAK3_uc010npu.1_Missense_Mutation_p.Q373H|PAK3_uc004eoy.1_Missense_Mutation_p.Q128H|PAK3_uc004eoz.2_Missense_Mutation_p.Q373H|PAK3_uc011mst.1_RNA|PAK3_uc010npv.1_Missense_Mutation_p.Q409H|PAK3_uc010npw.1_Missense_Mutation_p.Q394H	NM_001128173	NP_001121645	O75914	PAK3_HUMAN	p21-activated kinase 3 isoform d	388	Protein kinase.				multicellular organismal development		ATP binding|metal ion binding|protein serine/threonine kinase activity|SH3 domain binding			lung(6)|ovary(3)|large_intestine(1)	10						AGTGCCTGCAAGCTTTGGATT	0.318			NA								TSP Lung(19;0.15)			19	87					0	0	0.001882	0	0
DOCK11	139818	broad.mit.edu	37	X	117722150	117722150	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:117722150C>A	uc004eqp.2	+	17	1909	c.1846C>A	c.(1846-1848)CAA>AAA	p.Q616K	DOCK11_uc004eqq.2_Missense_Mutation_p.Q382K	NM_144658	NP_653259	Q5JSL3	DOC11_HUMAN	dedicator of cytokinesis 11	616					blood coagulation	cytosol	GTP binding			ovary(3)	3						AAAGAATTGCCAAAATATTAC	0.318			NA											13	56					0.00010058	0.000115886	0.001368	1	0
ODZ1	10178	broad.mit.edu	37	X	123516628	123516628	+	Silent	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:123516628T>C	uc004euj.2	-	30	7375	c.7311A>G	c.(7309-7311)CAA>CAG	p.Q2437Q	ODZ1_uc011muj.1_Silent_p.Q2443Q|ODZ1_uc010nqy.2_Silent_p.Q2444Q	NM_014253	NP_055068	Q9UKZ4	TEN1_HUMAN	odz, odd Oz/ten-m homolog 1 isoform 3	2437	Extracellular (Potential).				immune response|negative regulation of cell proliferation|nervous system development|signal transduction	extracellular region	heparin binding			ovary(11)|breast(4)|large_intestine(2)|skin(2)|pancreas(2)|upper_aerodigestive_tract(1)|lung(1)	23						CATTGTGTAATTGGAAACCAA	0.338			NA											33	150					0	0	0.006999	0	0
DCAF12L2	340578	broad.mit.edu	37	X	125298852	125298852	+	Silent	SNP	G	G	T			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:125298852G>T	uc004euk.1	-	1	1083	c.1056C>A	c.(1054-1056)GGC>GGA	p.G352G		NM_001013628	NP_001013650	Q5VW00	DC122_HUMAN	DDB1 and CUL4 associated factor 12-like 2	352	WD 4.									lung(2)|skin(2)|large_intestine(1)|pancreas(1)|ovary(1)	7						GCGACCGCACGCCTGTGCCAC	0.632			NA											14	75					3.27435e-08	4.31693e-08	0.00245	1	0
SAGE1	55511	broad.mit.edu	37	X	134988265	134988265	+	Silent	SNP	C	C	G	rs151240146		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:134988265C>G	uc004ezh.2	+	6	704	c.537C>G	c.(535-537)CCC>CCG	p.P179P	SAGE1_uc010nry.1_Silent_p.P148P|SAGE1_uc011mvv.1_Intron	NM_018666	NP_061136	Q9NXZ1	SAGE1_HUMAN	sarcoma antigen 1	179										ovary(2)|skin(1)	3	Acute lymphoblastic leukemia(192;0.000127)					CAACTGGTCCCACAGGGCTTA	0.433			NA											28	89					0	0	0.008361	0	0
ARHGEF6	9459	broad.mit.edu	37	X	135829707	135829707	+	Missense_Mutation	SNP	C	C	A			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:135829707C>A	uc004fab.2	-	3	756	c.294G>T	c.(292-294)AAG>AAT	p.K98N	ARHGEF6_uc011mwd.1_Translation_Start_Site|ARHGEF6_uc011mwe.1_Translation_Start_Site	NM_004840	NP_004831	Q15052	ARHG6_HUMAN	Rac/Cdc42 guanine nucleotide exchange factor 6	98	CH.				apoptosis|cell junction assembly|induction of apoptosis by extracellular signals|JNK cascade|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol	GTPase activator activity|Rho guanyl-nucleotide exchange factor activity				0	Acute lymphoblastic leukemia(192;0.000127)					TACTCAGTACCTTGGAGAAAT	0.378			NA											10	47					3.86212e-05	4.58951e-05	0.008291	1	0
ZIC3	7547	broad.mit.edu	37	X	136649818	136649818	+	Missense_Mutation	SNP	C	C	T	rs122462165		TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:136649818C>T	uc004fak.2	+	1	1473	c.968C>T	c.(967-969)ACG>ATG	p.T323M		NM_003413	NP_003404	O60481	ZIC3_HUMAN	zinc finger protein of the cerebellum 3	323			T -> M (in HTX1; lacks DNA-binding; does not inhibit transcriptional activation and interaction with GLI3).		cell differentiation|positive regulation of transcription from RNA polymerase II promoter	cytoplasm|nucleus	protein binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(2)|breast(1)	3	Acute lymphoblastic leukemia(192;0.000127)					CGAGTGCACACGGGCGAGAAG	0.592			NA											13	146					0	0	0.001855	0	0
ATP2B3	492	broad.mit.edu	37	X	152806836	152806836	+	Silent	SNP	T	T	C			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:152806836T>C	uc004fht.1	+	2	354	c.228T>C	c.(226-228)AAT>AAC	p.N76N	ATP2B3_uc004fhs.1_Silent_p.N76N	NM_001001344	NP_001001344	Q16720	AT2B3_HUMAN	plasma membrane calcium ATPase 3 isoform 3b	76	Cytoplasmic (Potential).				ATP biosynthetic process|platelet activation	integral to membrane|plasma membrane	ATP binding|calcium-transporting ATPase activity|calmodulin binding|metal ion binding			pancreas(1)	1	all_hematologic(71;4.25e-06)|Acute lymphoblastic leukemia(192;6.56e-05)					ACAACACCAATGACCTGGAGA	0.627			NA											28	19					0	0	0.003271	0	0
SLC6A15	55117	broad.mit.edu	37	12	85257375	85257375	+	Frame_Shift_Del	DEL	A	A	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr12:85257375delA	uc001szv.2	-	11	2154	c.1661delT	c.(1660-1662)ATGfs	p.M554fs	SLC6A15_uc010sul.1_Frame_Shift_Del_p.M447fs|SLC6A15_uc001szw.1_Frame_Shift_Del_p.M262fs	NM_182767	NP_877499	Q9H2J7	S6A15_HUMAN	solute carrier family 6, member 15 isoform 1	554					cellular nitrogen compound metabolic process|leucine transport|proline transport	integral to plasma membrane	amino acid transmembrane transporter activity|neurotransmitter:sodium symporter activity			pancreas(2)|ovary(1)	3						TAGGTCTTCCATAAACCTGAA	0.289			NA											7	37	---	---	---	---	NA	NA	NA	NA	NA
SYNM	23336	broad.mit.edu	37	15	99672890	99672890	+	Frame_Shift_Del	DEL	C	C	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr15:99672890delC	uc002bup.2	+	6	4445	c.4325delC	c.(4324-4326)GCAfs	p.A1442fs	SYNM_uc002buo.2_Intron|SYNM_uc002buq.2_Intron	NM_145728	NP_663780	O15061	SYNEM_HUMAN	desmuslin isoform A	1442	Tail.|Interaction with DMD and UTRN.|Interaction with TLN1 and VCL.				intermediate filament cytoskeleton organization	adherens junction|costamere|intermediate filament|neurofilament cytoskeleton	intermediate filament binding|structural constituent of cytoskeleton|structural constituent of muscle|vinculin binding			ovary(3)|central_nervous_system(1)	4						GGCAAGTTAGCAGACAGCAGC	0.532	Pancreas(125;1071 1762 21750 40003 40381)		NA											124	151	---	---	---	---	NA	NA	NA	NA	NA
FASN	2194	broad.mit.edu	37	17	80037035	80037035	+	Frame_Shift_Del	DEL	C	C	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr17:80037035delC	uc002kdu.2	-	43	7637	c.7520delG	c.(7519-7521)AGCfs	p.S2507fs	FASN_uc002kdv.1_RNA	NM_004104	NP_004095	P49327	FAS_HUMAN	fatty acid synthase	2507	Thioesterase (By similarity).				energy reserve metabolic process|fatty acid biosynthetic process|long-chain fatty-acyl-CoA biosynthetic process|pantothenate metabolic process|positive regulation of cellular metabolic process|triglyceride biosynthetic process	cytosol|Golgi apparatus|melanosome|plasma membrane	3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity|3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|3-oxoacyl-[acyl-carrier-protein] synthase activity|[acyl-carrier-protein] S-acetyltransferase activity|[acyl-carrier-protein] S-malonyltransferase activity|acyl carrier activity|cofactor binding|enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity|myristoyl-[acyl-carrier-protein] hydrolase activity|oleoyl-[acyl-carrier-protein] hydrolase activity|palmitoyl-[acyl-carrier-protein] hydrolase activity|phosphopantetheine binding|protein binding|zinc ion binding			central_nervous_system(1)	1	all_neural(118;0.0878)|Ovarian(332;0.227)|all_lung(278;0.246)		OV - Ovarian serous cystadenocarcinoma(97;0.0211)|BRCA - Breast invasive adenocarcinoma(99;0.0237)		Cerulenin(DB01034)|Orlistat(DB01083)|Pyrazinamide(DB00339)	CTCCCGCACGCTCACGCGTGG	0.592	Colon(59;314 1043 11189 28578 32273)		NA											8	40	---	---	---	---	NA	NA	NA	NA	NA
XKR7	343702	broad.mit.edu	37	20	30584492	30584492	+	Frame_Shift_Del	DEL	C	C	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr20:30584492delC	uc002wxe.2	+	3	1146	c.972delC	c.(970-972)TACfs	p.Y324fs		NM_001011718	NP_001011718	Q5GH72	XKR7_HUMAN	XK, Kell blood group complex subunit-related	324	Helical; (Potential).					integral to membrane				ovary(1)|breast(1)|skin(1)	3			Colorectal(19;0.00306)|COAD - Colon adenocarcinoma(19;0.0347)			CCAGCGTCTACAAGCTCTATT	0.617			NA											12	39	---	---	---	---	NA	NA	NA	NA	NA
XRCC2	7516	broad.mit.edu	37	7	152346220	152346220	+	Frame_Shift_Del	DEL	A	A	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr7:152346220delA	uc003wld.2	-	3	436	c.350delT	c.(349-351)TTGfs	p.L117fs		NM_005431	NP_005422	O43543	XRCC2_HUMAN	X-ray repair cross complementing protein 2	117					meiosis	nucleus	ATP binding|DNA binding|DNA-dependent ATPase activity			breast(1)|liver(1)	2		all_hematologic(28;0.0592)|Prostate(32;0.081)	OV - Ovarian serous cystadenocarcinoma(82;0.0423)	UCEC - Uterine corpus endometrioid carcinoma (81;0.0429)		GCAGTACACCAAAAAAAATCT	0.393			NA						Homologous_recombination					7	51	---	---	---	---	NA	NA	NA	NA	NA
PKHD1L1	93035	broad.mit.edu	37	8	110455991	110455991	+	Frame_Shift_Del	DEL	A	A	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chr8:110455991delA	uc003yne.2	+	37	4755	c.4651delA	c.(4651-4653)AAAfs	p.K1551fs		NM_177531	NP_803875	Q86WI1	PKHL1_HUMAN	fibrocystin L precursor	1551	Extracellular (Potential).				immune response	cytosol|extracellular space|integral to membrane	receptor activity			ovary(9)|central_nervous_system(2)|large_intestine(1)|breast(1)|pancreas(1)	14			OV - Ovarian serous cystadenocarcinoma(57;9.88e-13)			TACCAGGGTTAAAAATTCAAA	0.408			NA								HNSCC(38;0.096)			11	47	---	---	---	---	NA	NA	NA	NA	NA
SLC35A2	7355	broad.mit.edu	37	X	48768836	48768836	+	Frame_Shift_Del	DEL	C	C	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:48768836delC	uc004dlo.1	-	1	82	c.78delG	c.(76-78)GGGfs	p.G26fs	SLC35A2_uc011mml.1_Frame_Shift_Del_p.G26fs|SLC35A2_uc004dlp.1_Frame_Shift_Del_p.G26fs|SLC35A2_uc011mmm.1_Frame_Shift_Del_p.G26fs|SLC35A2_uc011mmn.1_Frame_Shift_Del_p.G26fs|SLC35A2_uc004dlr.1_5'Flank|SLC35A2_uc004dlq.2_Frame_Shift_Del_p.G26fs|SLC35A2_uc011mmo.1_Frame_Shift_Del_p.G26fs	NM_005660	NP_005651	P78381	S35A2_HUMAN	solute carrier family 35, member A2 isoform a	26					galactose metabolic process	Golgi membrane|integral to membrane|nucleus	sugar:hydrogen symporter activity|UDP-galactose transmembrane transporter activity			breast(1)	1						CACTGGCGGTCCCCGGCTCCA	0.692			NA											2	4	---	---	---	---	NA	NA	NA	NA	NA
PLXNB3	5365	broad.mit.edu	37	X	153040429	153040429	+	Frame_Shift_Del	DEL	C	C	-			TCGA-78-7161-01A-11D-2036-08	TCGA-78-7161-10A-01D-2036-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	1d917fa9-30cf-439f-817b-24cf49c459f7	944503e4-29da-42c7-addd-fc2218391c88	g.chrX:153040429delC	uc004fii.2	+	24	4200	c.4026delC	c.(4024-4026)TTCfs	p.F1342fs	PLXNB3_uc010nuk.2_Frame_Shift_Del_p.F1365fs|PLXNB3_uc011mzd.1_Frame_Shift_Del_p.F981fs|PLXNB3_uc004fij.1_RNA|SRPK3_uc004fik.2_5'Flank	NM_005393	NP_005384	Q9ULL4	PLXB3_HUMAN	plexin B3 isoform 1	1342	Cytoplasmic (Potential).				axon guidance	integral to membrane|intracellular|plasma membrane	protein binding|receptor activity			lung(1)	1	all_hematologic(71;4.25e-06)|all_lung(58;3.83e-05)|Lung NSC(58;5.54e-05)|Acute lymphoblastic leukemia(192;6.56e-05)					GCGCCTTCTTCCCTGGCCATG	0.692			NA											19	54	---	---	---	---	NA	NA	NA	NA	NA
