Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
NEUROD6	63974	hgsc.bcm.edu	36	7	31345240	31345240	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
AMPH	273	hgsc.bcm.edu	36	7	38500648	38500648	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
EGFR	1956	hgsc.bcm.edu	36	7	55216581	55216581	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SEMA3D	223117	hgsc.bcm.edu	36	7	84482362	84482362	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SAMD9L	219285	hgsc.bcm.edu	36	7	92598815	92598815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CALCR	799	hgsc.bcm.edu	36	7	92893816	92893816	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TRIP6	7205	hgsc.bcm.edu	36	7	100308252	100308252	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NRCAM	4897	hgsc.bcm.edu	36	7	107604203	107604203	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CTTNBP2	83992	hgsc.bcm.edu	36	7	117219846	117219846	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZC3HAV1	56829	hgsc.bcm.edu	36	7	138413878	138413878	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
BRAF	673	hgsc.bcm.edu	36	7	140146642	140146642	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PCNA	5111	hgsc.bcm.edu	36	20	5047470	5047470	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRRN4	164312	hgsc.bcm.edu	36	20	5970178	5970178	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TM9SF4	9777	hgsc.bcm.edu	36	20	30193260	30193260	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ERGIC3	51614	hgsc.bcm.edu	36	20	33599676	33599676	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
BCAS1	8537	hgsc.bcm.edu	36	20	52078727	52078727	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
VAPB	9217	hgsc.bcm.edu	36	20	56426677	56426677	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ADORA2A	135	hgsc.bcm.edu	36	22	23166656	23166656	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
THOC5	8563	hgsc.bcm.edu	36	22	28251864	28251864	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SGSM3	27352	hgsc.bcm.edu	36	22	39132124	39132124	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PHF21B	112885	hgsc.bcm.edu	36	22	43691072	43691072	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MOV10L1	54456	hgsc.bcm.edu	36	22	48880154	48880154	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
OR4K5	79317	hgsc.bcm.edu	36	14	19458894	19458894	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CHD8	57680	hgsc.bcm.edu	36	14	20940064	20940064	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SLC35F4	341880	hgsc.bcm.edu	36	14	57125774	57125774	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZFYVE26	23503	hgsc.bcm.edu	36	14	67338657	67338657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ADAM20	8748	hgsc.bcm.edu	36	14	70059136	70059136	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SAMD15	0	hgsc.bcm.edu	36	14	76914827	76914827	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
REXO1	57455	hgsc.bcm.edu	36	19	1778578	1778578	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TMPRSS9	360200	hgsc.bcm.edu	36	19	2347635	2347635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
XAB2	56949	hgsc.bcm.edu	36	19	7596922	7596922	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF490	57474	hgsc.bcm.edu	36	19	12552348	12552348	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
AKAP8	10270	hgsc.bcm.edu	36	19	15330828	15330828	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF253	56242	hgsc.bcm.edu	36	19	19863521	19863521	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF626	199777	hgsc.bcm.edu	36	19	20599616	20599616	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TMEM91	641649	hgsc.bcm.edu	36	19	46576076	46576076	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
BCL3	602	hgsc.bcm.edu	36	19	49954571	49954571	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GRIN2D	2906	hgsc.bcm.edu	36	19	53614306	53614306	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF547	284306	hgsc.bcm.edu	36	19	62580927	62580927	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF134	7693	hgsc.bcm.edu	36	19	62823527	62823527	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ADRA1A	148	hgsc.bcm.edu	36	8	26778241	26778241	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PNOC	5368	hgsc.bcm.edu	36	8	28242628	28242628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PLAG1	5324	hgsc.bcm.edu	36	8	57242414	57242414	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GGH	8836	hgsc.bcm.edu	36	8	64113791	64113791	+	Missense_Mutation	SNP	C	C	T	rs11545077	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRRCC1	85444	hgsc.bcm.edu	36	8	86222978	86222978	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PSKH2	85481	hgsc.bcm.edu	36	8	87150797	87150797	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PLEKHF2	79666	hgsc.bcm.edu	36	8	96236167	96236167	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SPAG1	6674	hgsc.bcm.edu	36	8	101306629	101306629	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RNF19A	25897	hgsc.bcm.edu	36	8	101369045	101369045	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CSMD3	114788	hgsc.bcm.edu	36	8	113472122	113472122	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CPSF1	29894	hgsc.bcm.edu	36	8	145596195	145596195	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ATAD3B	83858	hgsc.bcm.edu	36	1	1411413	1411413	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KDM1A	0	hgsc.bcm.edu	36	1	23267711	23267711	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ARID1A	8289	hgsc.bcm.edu	36	1	26978139	26978139	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZSCAN20	7579	hgsc.bcm.edu	36	1	33717790	33717790	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
AGBL4	84871	hgsc.bcm.edu	36	1	48901429	48901429	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
USP24	23358	hgsc.bcm.edu	36	1	55363661	55363661	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
USP24	23358	hgsc.bcm.edu	36	1	55395626	55395626	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RBMXL1	56267	hgsc.bcm.edu	36	1	89221811	89221811	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GFI1	2672	hgsc.bcm.edu	36	1	92716734	92716734	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
AGL	178	hgsc.bcm.edu	36	1	100115827	100115827	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
C1orf162	128346	hgsc.bcm.edu	36	1	111822163	111822163	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
VANGL1	81839	hgsc.bcm.edu	36	1	116008235	116008235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GJA8	2703	hgsc.bcm.edu	36	1	145847403	145847403	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FLG2	388698	hgsc.bcm.edu	36	1	150590680	150590680	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LCE2B	26239	hgsc.bcm.edu	36	1	150926082	150926082	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LMNA	4000	hgsc.bcm.edu	36	1	154373442	154373442	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LAMC1	3915	hgsc.bcm.edu	36	1	181378499	181378499	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KIF21B	23046	hgsc.bcm.edu	36	1	199239432	199239432	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RAB7L1	8934	hgsc.bcm.edu	36	1	204006545	204006545	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
HHAT	55733	hgsc.bcm.edu	36	1	208644472	208644472	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CHRM3	1131	hgsc.bcm.edu	36	1	238138836	238138836	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
OSBPL5	114879	hgsc.bcm.edu	36	11	3099869	3099869	+	Silent	SNP	G	G	A	rs11828515	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
OR52B6	340980	hgsc.bcm.edu	36	11	5559627	5559627	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ABCC8	6833	hgsc.bcm.edu	36	11	17375098	17375098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FLRT1	23769	hgsc.bcm.edu	36	11	63641360	63641360	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MEN1	4221	hgsc.bcm.edu	36	11	64328476	64328476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MEN1	4221	hgsc.bcm.edu	36	11	64331087	64331087	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MEN1	4221	hgsc.bcm.edu	36	11	64334033	64334033	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
EHBP1L1	254102	hgsc.bcm.edu	36	11	65105771	65105771	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TYR	7299	hgsc.bcm.edu	36	11	88564148	88564148	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KIAA1731	85459	hgsc.bcm.edu	36	11	93070648	93070648	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CNTN5	53942	hgsc.bcm.edu	36	11	99684345	99684345	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ATM	472	hgsc.bcm.edu	36	11	107622922	107622922	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
HIST1H4A	8359	hgsc.bcm.edu	36	6	26130156	26130156	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MAS1L	116511	hgsc.bcm.edu	36	6	29562652	29562652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MICA	4276	hgsc.bcm.edu	36	6	31487819	31487819	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
C6orf25	80739	hgsc.bcm.edu	36	6	31799902	31799902	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TFAP2D	83741	hgsc.bcm.edu	36	6	50790802	50790802	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PTPRK	5796	hgsc.bcm.edu	36	6	128339517	128339517	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SYNE1	23345	hgsc.bcm.edu	36	6	152754280	152754280	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SYNE1	23345	hgsc.bcm.edu	36	6	152818387	152818387	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TAGAP	117289	hgsc.bcm.edu	36	6	159377663	159377663	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
IGF2R	3482	hgsc.bcm.edu	36	6	160437541	160437541	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ALOX15	246	hgsc.bcm.edu	36	17	4489540	4489540	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NLRP1	22861	hgsc.bcm.edu	36	17	5385932	5385932	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ODF4	146852	hgsc.bcm.edu	36	17	8189457	8189457	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MYH4	4622	hgsc.bcm.edu	36	17	10292660	10292660	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
DNAH9	1770	hgsc.bcm.edu	36	17	11813437	11813437	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF286A	57335	hgsc.bcm.edu	36	17	15552269	15552269	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SPECC1	92521	hgsc.bcm.edu	36	17	20104116	20104116	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PCGF2	7703	hgsc.bcm.edu	36	17	34149384	34149384	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GJC1	125111	hgsc.bcm.edu	36	17	40238213	40238213	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ABCC3	8714	hgsc.bcm.edu	36	17	46090831	46090831	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SPAG9	9043	hgsc.bcm.edu	36	17	46403079	46403079	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
BAGE	574	hgsc.bcm.edu	36	21	10120604	10120604	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CCDC154	645811	hgsc.bcm.edu	36	16	1427953	1427953	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CREBBP	1387	hgsc.bcm.edu	36	16	3728619	3728619	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CIITA	4261	hgsc.bcm.edu	36	16	10909029	10909029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TNRC6A	27327	hgsc.bcm.edu	36	16	24723617	24723617	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MMP2	4313	hgsc.bcm.edu	36	16	54075521	54075521	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CDH8	1006	hgsc.bcm.edu	36	16	60245416	60245416	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CDH1	51343	hgsc.bcm.edu	36	16	67403635	67403635	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MYOM1	8736	hgsc.bcm.edu	36	18	3178882	3178882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MIB1	57534	hgsc.bcm.edu	36	18	17602678	17602678	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SMAD4	4089	hgsc.bcm.edu	36	18	46829110	46829110	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SMAD4	4089	hgsc.bcm.edu	36	18	46845807	46845807	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ALPK2	115701	hgsc.bcm.edu	36	18	54355688	54355688	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
DSEL	92126	hgsc.bcm.edu	36	18	63329946	63329946	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CCDC102B	79839	hgsc.bcm.edu	36	18	64829164	64829164	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NGLY1	55768	hgsc.bcm.edu	36	3	25736664	25736664	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TRANK1	0	hgsc.bcm.edu	36	3	36846130	36846130	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GRM2	2912	hgsc.bcm.edu	36	3	51721770	51721770	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
DZIP3	9666	hgsc.bcm.edu	36	3	109812844	109812844	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GATA2	2624	hgsc.bcm.edu	36	3	129688354	129688354	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
COL6A6	131873	hgsc.bcm.edu	36	3	131783250	131783250	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZIC1	7545	hgsc.bcm.edu	36	3	148611327	148611327	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
DHX36	170506	hgsc.bcm.edu	36	3	155515544	155515544	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PIK3CA	5290	hgsc.bcm.edu	36	3	180434689	180434689	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FBXO45	200933	hgsc.bcm.edu	36	3	197795429	197795429	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CACNA1C	775	hgsc.bcm.edu	36	12	2659126	2659126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ENO2	2026	hgsc.bcm.edu	36	12	6899081	6899081	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
HOXC8	3224	hgsc.bcm.edu	36	12	52691210	52691210	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
YEATS4	8089	hgsc.bcm.edu	36	12	68040025	68040025	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
BEST3	144453	hgsc.bcm.edu	36	12	68377817	68377817	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ATP2B1	490	hgsc.bcm.edu	36	12	88521686	88521686	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LUM	4060	hgsc.bcm.edu	36	12	90026313	90026313	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CHST11	50515	hgsc.bcm.edu	36	12	103675308	103675308	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CORO1C	23603	hgsc.bcm.edu	36	12	107570274	107570274	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
EPB42	2038	hgsc.bcm.edu	36	15	41286883	41286883	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
UNC13C	440279	hgsc.bcm.edu	36	15	52344860	52344860	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GCOM1	145781	hgsc.bcm.edu	36	15	55697670	55697670	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MYO9A	4649	hgsc.bcm.edu	36	15	70047416	70047416	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ISLR	3671	hgsc.bcm.edu	36	15	72254698	72254698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
AP3B2	8120	hgsc.bcm.edu	36	15	81143553	81143553	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82357672	82357672	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ISG20	3669	hgsc.bcm.edu	36	15	86996469	86996469	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FRMPD4	9758	hgsc.bcm.edu	36	X	12644682	12644682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TLR8	51311	hgsc.bcm.edu	36	X	12847237	12847237	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TLR8	51311	hgsc.bcm.edu	36	X	12848590	12848590	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MAP7D2	256714	hgsc.bcm.edu	36	X	19943304	19943304	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FAM47C	442444	hgsc.bcm.edu	36	X	36936860	36936860	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
WNK3	65267	hgsc.bcm.edu	36	X	54351138	54351138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
UPF3B	65109	hgsc.bcm.edu	36	X	118855947	118855947	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ODZ1	10178	hgsc.bcm.edu	36	X	123345668	123345668	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GPR112	139378	hgsc.bcm.edu	36	X	135258515	135258515	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FGF13	2258	hgsc.bcm.edu	36	X	137545403	137545403	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FMR1	2477	hgsc.bcm.edu	36	X	146819420	146819420	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PASD1	139135	hgsc.bcm.edu	36	X	150593173	150593173	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
POLN	353497	hgsc.bcm.edu	36	4	2179740	2179740	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GUF1	60558	hgsc.bcm.edu	36	4	44380082	44380082	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KIT	3815	hgsc.bcm.edu	36	4	55288406	55288406	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
AASDH	132949	hgsc.bcm.edu	36	4	56916229	56916229	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GPRIN3	285513	hgsc.bcm.edu	36	4	90389740	90389740	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ALPK1	80216	hgsc.bcm.edu	36	4	113571062	113571062	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
METTL14	57721	hgsc.bcm.edu	36	4	119850716	119850716	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
DCLK2	166614	hgsc.bcm.edu	36	4	151380349	151380349	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FBXW7	55294	hgsc.bcm.edu	36	4	153464848	153464848	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FBXW7	55294	hgsc.bcm.edu	36	4	153468910	153468910	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FBXO8	26269	hgsc.bcm.edu	36	4	175395230	175395230	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ADAM29	11086	hgsc.bcm.edu	36	4	176133343	176133343	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KCNS3	3790	hgsc.bcm.edu	36	2	17977147	17977147	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SULT6B1	391365	hgsc.bcm.edu	36	2	37252192	37252192	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
REG3A	5068	hgsc.bcm.edu	36	2	79238225	79238225	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MAP4K4	9448	hgsc.bcm.edu	36	2	101822715	101822715	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRP1B	53353	hgsc.bcm.edu	36	2	141341856	141341856	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRP2	4036	hgsc.bcm.edu	36	2	169734543	169734543	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRP2	4036	hgsc.bcm.edu	36	2	169855734	169855734	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZAK	51776	hgsc.bcm.edu	36	2	173742798	173742798	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TTN	7273	hgsc.bcm.edu	36	2	179293361	179293361	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
HECW2	57520	hgsc.bcm.edu	36	2	197006352	197006352	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ABCA12	26154	hgsc.bcm.edu	36	2	215515966	215515966	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
C9orf68	55064	hgsc.bcm.edu	36	9	4651998	4651998	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TLN1	7094	hgsc.bcm.edu	36	9	35693799	35693799	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TNFSF8	944	hgsc.bcm.edu	36	9	116706093	116706093	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TOR1A	1861	hgsc.bcm.edu	36	9	131616296	131616296	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NUP214	8021	hgsc.bcm.edu	36	9	133088085	133088085	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRCH1	23143	hgsc.bcm.edu	36	13	46158087	46158087	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
HTR2A	3356	hgsc.bcm.edu	36	13	46364660	46364660	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RB1	5925	hgsc.bcm.edu	36	13	47925204	47925204	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KPNA3	3839	hgsc.bcm.edu	36	13	49205152	49205152	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CARKD	55739	hgsc.bcm.edu	36	13	110075576	110075576	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GTPBP4	23560	hgsc.bcm.edu	36	10	1032096	1032096	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
UCMA	221044	hgsc.bcm.edu	36	10	13316247	13316247	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CHAT	10044	hgsc.bcm.edu	36	10	50505694	50505694	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PTEN	5728	hgsc.bcm.edu	36	10	89614251	89614251	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MKI67	4288	hgsc.bcm.edu	36	10	129793292	129793292	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RIOK2	55781	hgsc.bcm.edu	36	5	96532798	96532798	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
APC	324	hgsc.bcm.edu	36	5	112156042	112156042	+	Nonsense_Mutation	SNP	C	C	T	rs62619935	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
APC	324	hgsc.bcm.edu	36	5	112198591	112198591	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FNIP1	96459	hgsc.bcm.edu	36	5	131070046	131070046	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PCDHA1	56147	hgsc.bcm.edu	36	5	140148150	140148150	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
PCDHA3	56145	hgsc.bcm.edu	36	5	140162629	140162629	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TP53	7157	hgsc.bcm.edu	36	17	7520316	7520316	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NUAK2	81788	hgsc.bcm.edu	36	1	203544458	203544461	+	Frame_Shift_Del	DEL	CACG	CACG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CACG	CACG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TGOLN2	10618	hgsc.bcm.edu	36	2	85408047	85408088	+	In_Frame_Del	DEL	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF717	100131827	hgsc.bcm.edu	36	3	75869732	75869733	+	Frame_Shift_Ins	INS	-	-	AAAT	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF717	100131827	hgsc.bcm.edu	36	3	75869734	75869735	+	In_Frame_Del	INS	-	-	CTT	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MUC4	4585	hgsc.bcm.edu	36	3	196991050	196991097	+	In_Frame_Del	DEL	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MUC4	4585	hgsc.bcm.edu	36	3	196991492	196991539	+	In_Frame_Del	DEL	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MUC4	4585	hgsc.bcm.edu	36	3	196999762	196999809	+	In_Frame_Del	DEL	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FAT1	2195	hgsc.bcm.edu	36	4	187777865	187777865	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TAS2R3	50831	hgsc.bcm.edu	36	7	141111038	141111040	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	TCT	TCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RP1L1	94137	hgsc.bcm.edu	36	8	10505081	10505083	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RP1L1	94137	hgsc.bcm.edu	36	8	10505091	10505096	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	TCCTTC	TCCTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RUNX1T1	862	hgsc.bcm.edu	36	8	93096137	93096139	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CEL	1056	hgsc.bcm.edu	36	9	134936823	134936855	+	In_Frame_Del	DEL	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRRIQ1	84125	hgsc.bcm.edu	36	12	84162777	84162777	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ORAI1	84876	hgsc.bcm.edu	36	12	120549157	120549162	+	In_Frame_Del	DEL	CCGCCA	CCGCCA	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CCGCCA	CCGCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
WDR66	144406	hgsc.bcm.edu	36	12	120843780	120843781	+	In_Frame_Ins	INS	-	-	GAGGAGGAGGAGAAA	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GPHN	10243	hgsc.bcm.edu	36	14	66595222	66595223	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SLX1A	0	hgsc.bcm.edu	36	16	29373712	29373712	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RLTPR	146206	hgsc.bcm.edu	36	16	66238733	66238735	+	In_Frame_Del	DEL	ATG	ATG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	ATG	ATG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LGALS9B	284194	hgsc.bcm.edu	36	17	20311374	20311375	+	Frame_Shift_Ins	INS	-	-	TC	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KRTAP4-1	85285	hgsc.bcm.edu	36	17	36594322	36594378	+	Frame_Shift_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GNRH2	2797	hgsc.bcm.edu	36	20	2974345	2974346	+	Frame_Shift_Ins	INS	-	-	GCCCC	rs16996832	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RALY	22913	hgsc.bcm.edu	36	20	32128525	32128526	+	In_Frame_Ins	INS	-	-	CAG	rs10649600	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215568	+	In_Frame_Ins	INS	-	-	AAGTCCCCTGAGAAGGCC	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FAM47A	158724	hgsc.bcm.edu	36	X	34059579	34059614	+	In_Frame_Del	DEL	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NUAK2	81788	hgsc.bcm.edu	36	1	203544458	203544461	+	Frame_Shift_Del	DEL	CACG	CACG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CACG	CACG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TGOLN2	10618	hgsc.bcm.edu	36	2	85408047	85408088	+	In_Frame_Del	DEL	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT	CTTTTTGGGTCTTTGCCTCCGCACCCGACTTGTTGGAGCTGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF717	100131827	hgsc.bcm.edu	36	3	75869732	75869733	+	Frame_Shift_Ins	INS	-	-	AAAT	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ZNF717	100131827	hgsc.bcm.edu	36	3	75869734	75869735	+	In_Frame_Del	INS	-	-	CTT	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MUC4	4585	hgsc.bcm.edu	36	3	196991050	196991097	+	In_Frame_Del	DEL	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MUC4	4585	hgsc.bcm.edu	36	3	196991492	196991539	+	In_Frame_Del	DEL	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
MUC4	4585	hgsc.bcm.edu	36	3	196999762	196999809	+	In_Frame_Del	DEL	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FAT1	2195	hgsc.bcm.edu	36	4	187777865	187777865	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
TAS2R3	50831	hgsc.bcm.edu	36	7	141111038	141111040	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	TCT	TCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RP1L1	94137	hgsc.bcm.edu	36	8	10505081	10505083	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RP1L1	94137	hgsc.bcm.edu	36	8	10505091	10505096	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	TCCTTC	TCCTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RUNX1T1	862	hgsc.bcm.edu	36	8	93096137	93096139	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
CEL	1056	hgsc.bcm.edu	36	9	134936823	134936855	+	In_Frame_Del	DEL	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG	CCCACGGGTGACTCCGAGACCGCCCCCGTGCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
LRRIQ1	84125	hgsc.bcm.edu	36	12	84162777	84162777	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
ORAI1	84876	hgsc.bcm.edu	36	12	120549157	120549162	+	In_Frame_Del	DEL	CCGCCA	CCGCCA	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CCGCCA	CCGCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
WDR66	144406	hgsc.bcm.edu	36	12	120843780	120843781	+	In_Frame_Ins	INS	-	-	GAGGAGGAGGAGAAA	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
GPHN	10243	hgsc.bcm.edu	36	14	66595222	66595223	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
SLX1A	0	hgsc.bcm.edu	36	16	29373712	29373712	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RLTPR	146206	hgsc.bcm.edu	36	16	66238733	66238735	+	In_Frame_Del	DEL	ATG	ATG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	ATG	ATG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KRTAP4-1	85285	hgsc.bcm.edu	36	17	36594322	36594378	+	Frame_Shift_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
RALY	22913	hgsc.bcm.edu	36	20	32128525	32128526	+	In_Frame_Ins	INS	-	-	CAG	rs10649600	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215568	+	In_Frame_Ins	INS	-	-	AAGTCCCCTGAGAAGGCC	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
FAM47A	158724	hgsc.bcm.edu	36	X	34059579	34059614	+	In_Frame_Del	DEL	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG	-	novel	unknown	TCGA-AG-3731-01A-11D-1733-10	TCGA-AG-3731-11A-01D-1733-10	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG	ATGGGACACTCCAGTCTCTGGAGGCTCCGGGCGGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3f3974a1-e0c1-4b51-a363-73938d0c2b00	20617e67-8a2d-4150-86d7-1c1a5854adf3
