Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
DH17	0	genome.wustl.edu	37	17	76420060	76420060	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	17	76420060	76420060	G	A	SNP	DH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.13385	p.T4462I	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DH17	HGNC	ENSG00000187775	tier1	-	-	35	0	0.00	31	7	18.42	91	0	0.00	48	18	27.27
CALU	0	genome.wustl.edu	37	7	128394753	128394753	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	7	128394753	128394753	A	T	SNP	CALU	ENST00000542996	human	ensembl	74_37	+1	known	missense	c.416	p.N139I	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALU	HGNC	ENSG00000128595	tier1	-	-	57	0	0.00	34	10	22.73	92	0	0.00	71	21	22.83
SPEG	0	genome.wustl.edu	37	2	220350080	220350080	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	2	220350080	220350080	G	A	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.7622	p.S2541N	1.000	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	102	0	0.00	148	65	30.37	38	0	0.00	73	20	21.51
HTR1A	0	genome.wustl.edu	37	5	63257295	63257295	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	5	63257295	63257295	C	A	SNP	HTR1A	ENST00000323865	human	ensembl	74_37	-1	known	missense	c.252	p.M84I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1A_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt,prints_NPY_rcpt	-	no_errors	HTR1A	HGNC	ENSG00000178394	tier1	-	-	20	0	0.00	7	6	46.15	48	0	0.00	18	9	33.33
SHPRH	0	genome.wustl.edu	37	6	146264415	146264415	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	6	146264415	146264415	A	G	SNP	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	missense	c.2102	p.F701S	1.000	superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Znf_PHD	pfam_SNF2_N,pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,superfamily_WW_dom,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414	tier1	-	-	25	0	0.00	14	11	44.00	94	0	0.00	30	43	58.90
ZNF141	0	genome.wustl.edu	37	4	367650	367650	+	Silent	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	4	367650	367650	G	A	SNP	ZNF141	ENST00000240499	human	ensembl	74_37	+1	known	silent	c.1424	p.*475	0.173	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF141	HGNC	ENSG00000131127	tier1	-	-	65	0	0.00	70	10	12.50	16	0	0.00	31	5	13.51
DOCK3	0	genome.wustl.edu	37	3	51297624	51297624	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	3	51297624	51297624	G	A	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.2222	p.R741Q	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	49	0	0.00	14	9	39.13	93	0	0.00	53	21	28.38
C1orf173	0	genome.wustl.edu	37	1	75097467	75097467	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	1	75097467	75097467	G	C	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	missense	c.749	p.S250C	0.000	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	tier1	-	-	35	0	0.00	30	23	43.40	112	0	0.00	75	35	31.82
RYR3	0	genome.wustl.edu	37	15	33858928	33858928	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	15	33858928	33858928	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.1196	p.R399I	1.000	superfamily_MIR_motif	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	45	0	0.00	15	29	65.91	97	0	0.00	42	24	36.36
OR2T2	0	genome.wustl.edu	37	1	248616711	248616711	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	1	248616711	248616711	G	A	SNP	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	missense	c.613	p.V205M	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	tier1	-	-	9	0	0.00	2	7	77.78	71	0	0.00	18	29	61.70
KRR1	0	genome.wustl.edu	37	12	75897849	75897849	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	75897849	75897849	T	G	SNP	KRR1	ENST00000229214	human	ensembl	74_37	-1	known	missense	c.666	p.L222F	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	KRR1	HGNC	ENSG00000111615	tier1	-	-	33	0	0.00	378	58	13.30	56	0	0.00	1618	202	11.09
SPATA31D1	0	genome.wustl.edu	37	9	84608921	84608921	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	9	84608921	84608921	C	T	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.3536	p.S1179F	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	59	0	0.00	48	27	36.00	24	0	0.00	17	3	15.00
FGFR1OP	0	genome.wustl.edu	37	6	167413584	167413584	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	6	167413584	167413584	G	C	SNP	FGFR1OP	ENST00000366847	human	ensembl	74_37	+1	known	missense	c.139	p.E47Q	1.000	NULL	pfam_FOP_dimerisation-dom_N,pfscan_LisH_dimerisation	-	no_errors	FGFR1OP	HGNC	ENSG00000213066	tier1	-	-	112	0	0.00	90	16	15.09	75	0	0.00	59	18	23.38
KIAA2022	0	genome.wustl.edu	37	X	73961202	73961202	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	X	73961202	73961202	G	A	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.3190	p.R1064C	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	tier1	-	-	16	0	0.00	12	10	45.45	63	0	0.00	40	29	42.03
ZNF141	0	genome.wustl.edu	37	4	367589	367589	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	4	367589	367589	G	A	SNP	ZNF141	ENST00000240499	human	ensembl	74_37	+1	known	missense	c.1363	p.D455N	0.011	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF141	HGNC	ENSG00000131127	tier1	-	-	99	0	0.00	95	9	8.65	29	0	0.00	28	6	17.65
HYDIN	0	genome.wustl.edu	37	16	70942292	70942292	+	Silent	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	16	70942292	70942292	C	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.8259	p.T2753	0.000	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	40	0	0.00	21	11	34.38	25	0	0.00	16	2	11.11
HLA-DQA2	0	genome.wustl.edu	37	6	32712953	32712953	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	6	32712953	32712953	T	A	SNP	HLA-DQA2	ENST00000374940	human	ensembl	74_37	+1	known	missense	c.100	p.Y34N	0.054	pfam_MHC_II_a_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N	pfam_MHC_II_a_N,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DQA2	HGNC	ENSG00000237541	tier1	-	-	36	0	0.00	18	7	28.00	71	0	0.00	65	18	21.69
WDSUB1	0	genome.wustl.edu	37	2	160112887	160112887	+	Splice_Site	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	2	160112887	160112887	C	T	SNP	WDSUB1	ENST00000359774	human	ensembl	74_37	-1	known	splice_site	c.953-1	e8-1	1.000	-	-	-	no_errors	WDSUB1	HGNC	ENSG00000196151	tier1	-	-	46	0	0.00	20	11	35.48	86	0	0.00	17	11	39.29
ZNF141	0	genome.wustl.edu	37	4	367636	367636	+	Silent	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	4	367636	367636	G	A	SNP	ZNF141	ENST00000240499	human	ensembl	74_37	+1	known	silent	c.1410	p.K470	0.423	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF141	HGNC	ENSG00000131127	tier1	-	-	71	0	0.00	73	9	10.98	20	0	0.00	33	5	13.16
CYP27B1	0	genome.wustl.edu	37	12	58159275	58159275	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	58159275	58159275	C	T	SNP	CYP27B1	ENST00000228606	human	ensembl	74_37	-1	known	missense	c.394	p.E132K	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP27B1	HGNC	ENSG00000111012	tier1	-	-	14	0	0.00	298	96	24.37	50	0	0.00	444	121	21.42
MUT	0	genome.wustl.edu	37	6	49427080	49427080	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	6	49427080	49427080	G	A	SNP	MUT	ENST00000274813	human	ensembl	74_37	-1	known	missense	c.100	p.H34Y	0.994	superfamily_Cbl-dep_enz_cat	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085	tier1	-	-	26	0	0.00	25	8	24.24	56	1	1.75	43	13	23.21
TVP23C	0	genome.wustl.edu	37	17	15441452	15441452	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	17	15441452	15441452	G	C	SNP	TVP23C	ENST00000428082	human	ensembl	74_37	-1	novel	missense	c.607	p.Q203E	0.997	NULL	pfam_DUF846_euk	-	no_errors	TVP23C	HGNC	ENSG00000175106	tier1	-	-	118	0	0.00	103	12	10.43	67	0	0.00	41	10	19.61
OR1F1	0	genome.wustl.edu	37	16	3254696	3254696	+	Silent	SNP	G	G	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	16	3254696	3254696	G	T	SNP	OR1F1	ENST00000304646	human	ensembl	74_37	+1	known	silent	c.450	p.V150	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1F1	HGNC	ENSG00000168124	tier1	-	-	25	0	0.00	15	11	42.31	29	0	0.00	16	16	50.00
RAB18	0	genome.wustl.edu	37	10	27827289	27827289	+	R	SNP	A	A	G			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	10	27827289	27827289	A	G	SNP	RAB18	ENST00000465772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RAB18	HGNC	ENSG00000099246	tier1	-	-	20	0	0.00	7	8	53.33	70	0	0.00	42	16	27.59
ZZZ3	0	genome.wustl.edu	37	1	78044547	78044547	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	1	78044547	78044547	C	T	SNP	ZZZ3	ENST00000370801	human	ensembl	74_37	-1	known	missense	c.2090	p.S697N	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	ZZZ3	HGNC	ENSG00000036549	tier1	-	-	33	0	0.00	11	7	38.89	96	0	0.00	47	11	18.97
CALCOCO1	0	genome.wustl.edu	37	12	54117527	54117527	+	Silent	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	54117527	54117527	G	A	SNP	CALCOCO1	ENST00000550804	human	ensembl	74_37	-1	known	silent	c.300	p.F100	1.000	pfam_CoCoA	pfam_CoCoA	-	no_errors	CALCOCO1	HGNC	ENSG00000012822	tier1	-	-	23	0	0.00	16	6	27.27	49	0	0.00	27	5	15.62
DUSP22	0	genome.wustl.edu	37	6	311931	311931	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	6	311931	311931	C	G	SNP	DUSP22	ENST00000419235	human	ensembl	74_37	+1	known	missense	c.107	p.S36C	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP22	HGNC	ENSG00000112679	tier1	-	-	60	0	0.00	56	16	22.22	79	0	0.00	68	13	16.05
RCL1	0	genome.wustl.edu	37	9	4860199	4860199	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	9	4860199	4860199	A	T	SNP	RCL1	ENST00000381750	human	ensembl	74_37	+1	known	missense	c.1046	p.E349V	1.000	pirsf_R3'_term_phos_cyc,tigrfam_R3'_term_phos_cyc_type_2	pfam_R3'_phos_cyclase_dom,pfam_R3'-term_phos_cycl_insert,superfamily_R3'P_cycl/enolpyr_Trfase_a/b,pirsf_R3'_term_phos_cyc,tigrfam_R3'_term_phos_cyc_type_2	-	no_errors	RCL1	HGNC	ENSG00000120158	tier1	-	-	182	0	0.00	95	41	30.15	132	0	0.00	51	25	32.89
C1QA	0	genome.wustl.edu	37	1	22965616	22965616	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	1	22965616	22965616	G	A	SNP	C1QA	ENST00000374642	human	ensembl	74_37	+1	known	missense	c.454	p.V152I	0.087	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QA	HGNC	ENSG00000173372	tier1	rs201517118	GMAF=0.0005	29	0	0.00	34	5	12.82	97	0	0.00	101	42	29.37
RYR3	0	genome.wustl.edu	37	15	33941420	33941420	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	15	33941420	33941420	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.4126	p.G1376S	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	60	0	0.00	31	14	31.11	63	0	0.00	37	20	35.09
CALN1	0	genome.wustl.edu	37	7	71252869	71252869	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	7	71252869	71252869	T	C	SNP	CALN1	ENST00000395275	human	ensembl	74_37	-1	known	missense	c.677	p.N226S	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALN1	HGNC	ENSG00000183166	tier1	-	-	26	0	0.00	2	7	77.78	69	0	0.00	38	32	45.71
COL6A5	0	genome.wustl.edu	37	3	130098262	130098262	+	Silent	SNP	T	T	C			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	3	130098262	130098262	T	C	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	silent	c.669	p.V223	0.206	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	19	0	0.00	14	10	41.67	123	1	0.81	48	41	46.07
HLA-DQA2	0	genome.wustl.edu	37	6	32712940	32712940	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	6	32712940	32712940	C	G	SNP	HLA-DQA2	ENST00000374940	human	ensembl	74_37	+1	known	missense	c.87	p.D29E	0.995	pfam_MHC_II_a_N,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_II_a_N,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DQA2	HGNC	ENSG00000237541	tier1	-	-	30	0	0.00	17	8	32.00	73	0	0.00	63	17	21.25
FAM53B	0	genome.wustl.edu	37	10	126311826	126311826	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	10	126311826	126311826	C	A	SNP	FAM53B	ENST00000337318	human	ensembl	74_37	-1	known	missense	c.1254	p.Q418H	1.000	NULL	NULL	-	no_errors	FAM53B	HGNC	ENSG00000189319	tier1	-	-	43	0	0.00	28	6	17.65	30	0	0.00	22	3	12.00
CALD1	0	genome.wustl.edu	37	7	134632457	134632457	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	7	134632457	134632457	G	T	SNP	CALD1	ENST00000361388	human	ensembl	74_37	+1	known	missense	c.1044	p.K348N	1.000	pfam_Caldesmon_LSP	pfam_Caldesmon_LSP,prints_Caldesmon	-	no_errors	CALD1	HGNC	ENSG00000122786	tier1	-	-	55	0	0.00	22	24	52.17	57	1	1.72	39	21	35.00
HELLS	0	genome.wustl.edu	37	10	96313980	96313980	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	10	96313980	96313980	C	T	SNP	HELLS	ENST00000371332	human	ensembl	74_37	+1	known	missense	c.251	p.T84M	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HELLS	HGNC	ENSG00000119969	tier1	-	-	68	0	0.00	41	20	32.79	50	0	0.00	33	26	44.07
PTPRB	0	genome.wustl.edu	37	12	71016412	71016412	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	71016412	71016412	C	T	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	missense	c.466	p.E156K	1.000	NULL	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	tier1	-	-	46	0	0.00	182	134	42.41	74	0	0.00	316	292	48.03
MBD6	0	genome.wustl.edu	37	12	57919428	57919428	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	57919428	57919428	C	T	SNP	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	missense	c.677	p.S226L	1.000	NULL	superfamily_D-bd_dom,smart_Methyl_CpG_D-bd,pfscan_Methyl_CpG_D-bd	-	no_errors	MBD6	HGNC	ENSG00000166987	tier1	-	-	20	0	0.00	18	10	35.71	34	0	0.00	41	14	25.45
TVP23C	0	genome.wustl.edu	37	17	15443775	15443775	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	17	15443775	15443775	G	A	SNP	TVP23C	ENST00000518321	human	ensembl	74_37	-1	known	missense	c.563	p.S188L	0.959	NULL	pfam_DUF846_euk	-	no_errors	TVP23C	HGNC	ENSG00000175106	tier1	-	-	29	0	0.00	35	7	16.67	19	0	0.00	18	3	14.29
HSD17B6	0	genome.wustl.edu	37	12	57167823	57167823	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	57167823	57167823	G	T	SNP	HSD17B6	ENST00000322165	human	ensembl	74_37	+1	known	nonsense	c.187	p.E63*	0.991	pfam_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B6	HGNC	ENSG00000025423	tier1	-	-	37	0	0.00	27	146	84.39	6	0	0.00	7	82	92.13
HSD17B6	0	genome.wustl.edu	37	12	57167840	57167840	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	57167840	57167840	G	T	SNP	HSD17B6	ENST00000322165	human	ensembl	74_37	+1	known	missense	c.204	p.Q68H	0.873	pfam_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B6	HGNC	ENSG00000025423	tier1	-	-	37	0	0.00	25	143	85.12	8	0	0.00	9	98	91.59
HSD17B6	0	genome.wustl.edu	37	12	57167862	57167862	+	Silent	SNP	A	A	C			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	57167862	57167862	A	C	SNP	HSD17B6	ENST00000322165	human	ensembl	74_37	+1	known	silent	c.226	p.R76	0.155	pfam_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B6	HGNC	ENSG00000025423	tier1	-	-	38	0	0.00	24	168	87.50	11	0	0.00	8	101	92.66
HSD17B6	0	genome.wustl.edu	37	12	57167910	57167910	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	12	57167910	57167910	G	A	SNP	HSD17B6	ENST00000322165	human	ensembl	74_37	+1	known	missense	c.274	p.A92T	0.126	pfam_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B6	HGNC	ENSG00000025423	tier1	-	-	36	0	0.00	20	182	90.10	12	0	0.00	8	107	93.04
KCNJ3	0	genome.wustl.edu	37	2	155555781	155555781	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	2	155555781	155555781	A	T	SNP	KCNJ3	ENST00000295101	human	ensembl	74_37	+1	known	missense	c.494	p.Q165L	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ3	HGNC	ENSG00000162989	tier1	-	-	19	0	0.00	2	6	75.00	32	0	0.00	4	23	85.19
RELB	0	genome.wustl.edu	37	19	45525438	45525438	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	19	45525438	45525438	G	A	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	missense	c.632	p.R211Q	0.995	pfam_RHD,superfamily_p53-like_TF_D-bd,pfscan_RHD	pfam_RHD,superfamily_p53-like_TF_D-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856	tier1	rs55723886	-	31	0	0.00	30	7	18.92	19	0	0.00	9	6	40.00
TMPRSS5	0	genome.wustl.edu	37	11	113565326	113565326	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	11	113565326	113565326	C	T	SNP	TMPRSS5	ENST00000299882	human	ensembl	74_37	-1	known	missense	c.659	p.G220D	0.982	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS5	HGNC	ENSG00000166682	tier1	-	-	60	0	0.00	17	3	15.00	13	0	0.00	4	0	0.00
TRAF7	0	genome.wustl.edu	37	16	2220714	2220716	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	16	2220714	2220716	GAG	-	DEL	TRAF7	ENST00000326181	human	ensembl	74_37	+1	known	in_frame_del	c.331_333	p.E114in_frame_del	1.000:1.000:1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653	tier1			32	0	0.00	15	3	16.67	13	0	0.00	9	0	0.00
COL4A2-AS2	0	genome.wustl.edu	37	13	111109209	111109209	+	R	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	13	111109209	111109209	G	A	SNP	COL4A2-AS2	ENST00000458403	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	COL4A2-AS2	HGNC	ENSG00000224821	tier1	-	-	33	0	0.00	21	3	12.50	0	0	0.00	0	0	0.00
ENSG00000265002	0	genome.wustl.edu	37	15	20563408	20563417	+	R	DEL	CCTCTCCCTT	CCTCTCCCTT	-			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	CCTCTCCCTT	CCTCTCCCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	15	20563408	20563417	CCTCTCCCTT	-	DEL	ENSG00000265002	ENST00000581090	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.055:0.047:0.032:0.034:0.033:0.036:0.075:0.098:0.111:0.132	-	-	-	no_errors	AC026495.1	Clone_based_ensembl_gene	ENSG00000265002	tier1			3	0	0.00	4	0	0.00	3	0	0.00	4	0	0.00
FAM230C	0	genome.wustl.edu	37	22	21663770	21663770	+	R	SNP	G	G	A			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	22	21663770	21663770	G	A	SNP	FAM230C	ENST00000436681	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	KB-1183D5.13	Clone_based_vega_gene	ENSG00000206142	tier1	-	-	43	0	0.00	47	5	9.62	4	0	0.00	6	0	0.00
PRSS41	0	genome.wustl.edu	37	16	2848500	2848511	+	R	DEL	GGCGCTGCTGCT	GGCGCTGCTGCT	-			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	GGCGCTGCTGCT	GGCGCTGCTGCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	16	2848500	2848511	GGCGCTGCTGCT	-	DEL	PRSS41	ENST00000399677	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000:0.000:0.000:0.000:0.001:0.004:0.000:0.001:0.001:0.000:0.000	-	-	-	no_errors	PRSS41	HGNC	ENSG00000215148	tier1			0	0	0.00	0	0	0.00	0	0	0.00	0	0	0.00
TPRXL	0	genome.wustl.edu	37	3	14105964	14105965	+	In_Frame_Ins	INS	-	-	AGC			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	3	14105964	14105965	-	AGC	INS	TPRXL	ENST00000326972	human	ensembl	74_37	+1	known	in_frame_ins	c.288_289	p.100in_frame_insS	0.893:0.892	NULL	NULL	-	no_errors	TPRXL	HGNC	ENSG00000180438	tier1			12	0	0.00	11	6	35.29	0	0	0.00	0	0	0.00
FAM230A	0	genome.wustl.edu	37	22	20709111	20709111	+	Silent	SNP	C	C	T			TCGA-DX-AB35-01A-21D-A417-09	TCGA-DX-AB35-11A-11D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e6f1c2d9-3f78-45f4-ae85-1d8e8eccf797	7f0069c9-21bd-456c-808f-b7604c8e6d10	22	20709111	20709111	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	silent	c.843	p.H281	0.001	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	40	0	0.00	21	13	36.11	1	0	0.00	0	5	100.00
