Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
C1QTNF5	0	genome.wustl.edu	37	11	119210232	119210232	+	Missense_Mutation	SNP	A	A	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	11	119210232	119210232	A	T	SNP	C1QTNF5	ENST00000445041	human	ensembl	74_37	-1	known	missense	c.541	p.F181I	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF5	HGNC	ENSG00000223953	tier1	-	-	53	0	0.00	33	6	15.38	45	0	0.00	18	2	10.00
XIST	0	genome.wustl.edu	37	X	73071079	73071079	+	R	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	X	73071079	73071079	C	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	26	0	0.00	38	9	19.15	50	0	0.00	39	15	27.78
POTEH	0	genome.wustl.edu	37	22	16287369	16287369	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	22	16287369	16287369	G	A	SNP	POTEH	ENST00000343518	human	ensembl	74_37	-1	known	missense	c.517	p.R173C	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEH	HGNC	ENSG00000198062	tier1	-	-	117	0	0.00	229	39	14.55	32	0	0.00	29	11	27.50
CELSR3	0	genome.wustl.edu	37	3	48687949	48687949	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	3	48687949	48687949	C	T	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.6436	p.V2146I	0.001	smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	tier1	rs199670636	GMAF=0.0005	51	0	0.00	36	22	37.93	34	0	0.00	29	13	30.95
MYO18B	0	genome.wustl.edu	37	22	26164343	26164343	+	Silent	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	22	26164343	26164343	T	C	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	silent	c.460	p.L154	0.007	superfamily_Ribosomal_zn-bd	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tR-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	52	0	0.00	70	9	11.39	86	0	0.00	70	14	16.67
DENND4B	0	genome.wustl.edu	37	1	153908534	153908534	+	Splice_Site	SNP	A	A	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	153908534	153908534	A	G	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	splice_site	c.2568+2	e16+2	0.998	-	-	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	42	0	0.00	48	11	18.64	77	0	0.00	96	23	19.33
SLC22A1	0	genome.wustl.edu	37	6	160575836	160575836	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	6	160575836	160575836	C	T	SNP	SLC22A1	ENST00000366963	human	ensembl	74_37	+1	known	silent	c.1392	p.L464	0.235	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A1	HGNC	ENSG00000175003	tier1	-	-	53	0	0.00	52	41	44.09	122	1	0.81	62	111	63.79
FBN3	0	genome.wustl.edu	37	19	8194143	8194143	+	Silent	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	8194143	8194143	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	silent	c.2151	p.A717	0.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	50	0	0.00	50	23	31.51	19	0	0.00	20	7	25.93
ADAMTS20	0	genome.wustl.edu	37	12	43925909	43925909	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	12	43925909	43925909	C	T	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	silent	c.543	p.K181	1.000	pfam_Peptidase_M12B_N	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1	-	-	37	0	0.00	36	19	34.55	86	0	0.00	46	22	32.35
ZNF565	0	genome.wustl.edu	37	19	36685966	36685966	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	36685966	36685966	C	T	SNP	ZNF565	ENST00000304116	human	ensembl	74_37	-1	known	silent	c.102	p.V34	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF565	HGNC	ENSG00000196357	tier1	-	-	40	0	0.00	133	19	12.50	102	0	0.00	193	31	13.84
ACTRT3	0	genome.wustl.edu	37	3	169485726	169485726	+	Silent	SNP	T	T	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	3	169485726	169485726	T	G	SNP	ACTRT3	ENST00000330368	human	ensembl	74_37	-1	known	silent	c.613	p.R205	0.999	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT3	HGNC	ENSG00000184378	tier1	-	-	34	0	0.00	12	15	55.56	93	0	0.00	23	17	42.50
MAG	0	genome.wustl.edu	37	19	35801001	35801001	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	35801001	35801001	G	A	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	missense	c.1456	p.V486I	0.999	NULL	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695	tier1	rs142036180	-	20	0	0.00	66	29	30.53	7	0	0.00	14	2	12.50
KCNT1	0	genome.wustl.edu	37	9	138651572	138651572	+	Missense_Mutation	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	9	138651572	138651572	T	C	SNP	KCNT1	ENST00000298480	human	ensembl	74_37	+1	known	missense	c.902	p.L301P	1.000	pfam_2pore_dom_K_chnl_dom	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT1	HGNC	ENSG00000107147	tier1	-	-	27	0	0.00	32	6	15.79	42	0	0.00	30	7	18.92
ACO1	0	genome.wustl.edu	37	9	32407428	32407428	+	Splice_Site	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	9	32407428	32407428	G	A	SNP	ACO1	ENST00000309951	human	ensembl	74_37	+1	known	splice_site	c.266+1	e2+1	1.000	-	-	-	no_errors	ACO1	HGNC	ENSG00000122729	tier1	-	-	23	0	0.00	13	10	43.48	91	0	0.00	47	69	59.48
KLHL1	0	genome.wustl.edu	37	13	70456450	70456450	+	Missense_Mutation	SNP	G	G	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	13	70456450	70456450	G	C	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	missense	c.1192	p.L398V	1.000	pfam_BACK,smart_BACK	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361	tier1	-	-	28	0	0.00	16	14	46.67	58	0	0.00	22	22	50.00
CC1	0	genome.wustl.edu	37	13	37011865	37011865	+	Missense_Mutation	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	13	37011865	37011865	C	A	SNP	CC1	ENST00000255465	human	ensembl	74_37	+1	known	missense	c.397	p.Q133K	0.989	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CC1	HGNC	ENSG00000133101	tier1	-	-	26	0	0.00	19	14	42.42	96	0	0.00	38	17	30.91
PCDHA12	0	genome.wustl.edu	37	5	140257091	140257091	+	Silent	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	5	140257091	140257091	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	silent	c.2034	p.T678	0.000	pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	55	0	0.00	33	24	42.11	11	0	0.00	15	5	25.00
MECOM	0	genome.wustl.edu	37	3	168813010	168813010	+	Missense_Mutation	SNP	A	A	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	3	168813010	168813010	A	T	SNP	MECOM	ENST00000494292	human	ensembl	74_37	-1	known	missense	c.2846	p.F949Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	MECOM	HGNC	ENSG00000085276	tier1	-	-	35	0	0.00	20	10	33.33	92	0	0.00	25	19	43.18
ASH1L	0	genome.wustl.edu	37	1	155429652	155429652	+	Silent	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	155429652	155429652	T	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	silent	c.5022	p.P1674	0.596	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_D-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	tier1	-	-	19	0	0.00	49	15	23.44	101	0	0.00	86	18	17.31
LRTOMT	0	genome.wustl.edu	37	11	71817090	71817090	+	Missense_Mutation	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	11	71817090	71817090	C	G	SNP	LRTOMT	ENST00000427369	human	ensembl	74_37	+1	known	missense	c.595	p.L199V	1.000	NULL	NULL	-	no_errors	LRTOMT	HGNC	ENSG00000184154	tier1	-	-	27	0	0.00	32	7	17.95	57	0	0.00	52	12	18.75
MAD1L1	0	genome.wustl.edu	37	7	1938010	1938010	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	1938010	1938010	C	T	SNP	MAD1L1	ENST00000265854	human	ensembl	74_37	-1	known	silent	c.1824	p.V608	1.000	pfam_Mad1	pfam_Mad1	-	no_errors	MAD1L1	HGNC	ENSG00000002822	tier1	-	-	16	0	0.00	6	24	80.00	74	0	0.00	16	42	72.41
OR51I2	0	genome.wustl.edu	37	11	5475397	5475397	+	Missense_Mutation	SNP	G	G	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	11	5475397	5475397	G	C	SNP	OR51I2	ENST00000341449	human	ensembl	74_37	+1	known	missense	c.679	p.A227P	0.675	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I2	HGNC	ENSG00000187918	tier1	-	-	35	0	0.00	20	13	39.39	39	0	0.00	13	7	35.00
FBXO36	0	genome.wustl.edu	37	2	230861515	230861515	+	Missense_Mutation	SNP	A	A	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	230861515	230861515	A	G	SNP	FBXO36	ENST00000283946	human	ensembl	74_37	+1	known	missense	c.254	p.N85S	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO36	HGNC	ENSG00000153832	tier1	-	-	28	0	0.00	31	16	34.04	84	0	0.00	35	19	35.19
NWD1	0	genome.wustl.edu	37	19	16918668	16918668	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	16918668	16918668	C	T	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	silent	c.4008	p.I1336	0.088	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	-	-	26	0	0.00	38	14	26.92	81	0	0.00	79	37	31.90
GIMAP8	0	genome.wustl.edu	37	7	150174540	150174540	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	150174540	150174540	C	T	SNP	GIMAP8	ENST00000307271	human	ensembl	74_37	+1	known	missense	c.1670	p.T557M	0.000	pfam_AIG1,superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP8	HGNC	ENSG00000171115	tier1	-	-	34	0	0.00	14	19	57.58	136	0	0.00	52	97	65.10
RAP1A	0	genome.wustl.edu	37	1	112240076	112240076	+	Missense_Mutation	SNP	A	A	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	112240076	112240076	A	C	SNP	RAP1A	ENST00000356415	human	ensembl	74_37	+1	known	missense	c.140	p.D47A	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAP1A	HGNC	ENSG00000116473	tier1	-	-	26	0	0.00	31	13	29.55	34	0	0.00	38	8	17.02
ITGA4	0	genome.wustl.edu	37	2	182339711	182339711	+	Missense_Mutation	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	182339711	182339711	G	T	SNP	ITGA4	ENST00000397033	human	ensembl	74_37	+1	known	missense	c.344	p.G115V	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA4	HGNC	ENSG00000115232	tier1	-	-	31	0	0.00	31	21	40.38	93	0	0.00	43	26	37.68
ENSG00000269988	0	genome.wustl.edu	37	9	130871537	130871537	+	R	SNP	T	T	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	9	130871537	130871537	T	A	SNP	ENSG00000269988	ENST00000602939	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-395P17.11	Clone_based_vega_gene	ENSG00000269988	tier1	-	-	9	0	0.00	13	4	23.53	123	0	0.00	68	15	18.07
ATM	0	genome.wustl.edu	37	11	108164194	108164194	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	11	108164194	108164194	C	T	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.4766	p.S1589L	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	27	0	0.00	20	76	79.17	115	0	0.00	45	170	79.07
TUBA4B	0	genome.wustl.edu	37	2	220136525	220136525	+	R	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	220136525	220136525	G	T	SNP	TUBA4B	ENST00000473885	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBA4B	HGNC	ENSG00000243910	tier1	-	-	46	0	0.00	28	11	28.21	48	0	0.00	49	13	20.97
UBQLN2	0	genome.wustl.edu	37	X	56590841	56590841	+	Missense_Mutation	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	X	56590841	56590841	C	A	SNP	UBQLN2	ENST00000338222	human	ensembl	74_37	+1	known	missense	c.535	p.P179T	1.000	smart_STI1_HS-bd	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN2	HGNC	ENSG00000188021	tier1	-	-	20	0	0.00	6	12	66.67	60	0	0.00	15	10	40.00
H6PD	0	genome.wustl.edu	37	1	9324533	9324533	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	9324533	9324533	C	T	SNP	H6PD	ENST00000377403	human	ensembl	74_37	+1	known	missense	c.1981	p.R661W	1.000	tigrfam_6-phosphogluconolactonase_DevB	pfam_G6P_DH_C,pfam_G6P_DH_D-bd,prints_G6P_DH,tigrfam_6-phosphogluconolactonase_DevB	-	no_errors	H6PD	HGNC	ENSG00000049239	tier1	-	-	29	0	0.00	23	8	25.81	16	0	0.00	17	4	19.05
RAD23A	0	genome.wustl.edu	37	19	13060159	13060159	+	Missense_Mutation	SNP	G	G	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	13060159	13060159	G	C	SNP	RAD23A	ENST00000586534	human	ensembl	74_37	+1	known	missense	c.750	p.Q250H	1.000	pfam_XPC-bd,superfamily_XPC-bd,smart_STI1_HS-bd,tigrfam_Rad23	pfam_XPC-bd,pfam_UBA/Ts_N,pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,superfamily_XPC-bd,superfamily_UBA-like,smart_Ubiquitin_dom,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,prints_Rad23,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup,tigrfam_Rad23	-	no_errors	RAD23A	HGNC	ENSG00000179262	tier1	-	-	32	0	0.00	40	8	16.67	43	0	0.00	36	13	26.53
KIF21B	0	genome.wustl.edu	37	1	200956187	200956187	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	200956187	200956187	C	T	SNP	KIF21B	ENST00000422435	human	ensembl	74_37	-1	known	missense	c.3551	p.R1184Q	1.000	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852	tier1	-	-	32	0	0.00	5	9	64.29	52	0	0.00	17	14	45.16
PFKFB4	0	genome.wustl.edu	37	3	48563039	48563039	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	3	48563039	48563039	G	A	SNP	PFKFB4	ENST00000232375	human	ensembl	74_37	-1	known	missense	c.1051	p.R351W	1.000	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB4	HGNC	ENSG00000114268	tier1	-	-	11	0	0.00	16	8	33.33	83	0	0.00	51	28	35.44
P2RY12	0	genome.wustl.edu	37	3	151056330	151056330	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	3	151056330	151056330	C	T	SNP	P2RY12	ENST00000302632	human	ensembl	74_37	-1	known	missense	c.304	p.V102I	0.994	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y12_rcpt,prints_GPCR_Rhodpsn,prints_P2Y13_rcpt,prints_P2Y14_rcpt	-	no_errors	P2RY12	HGNC	ENSG00000169313	tier1	-	-	8	0	0.00	9	14	60.87	92	0	0.00	17	19	52.78
TTC23L	0	genome.wustl.edu	37	5	34880291	34880291	+	Missense_Mutation	SNP	G	G	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	5	34880291	34880291	G	C	SNP	TTC23L	ENST00000505624	human	ensembl	74_37	+1	known	missense	c.955	p.V319L	0.971	NULL	NULL	-	no_errors	TTC23L	HGNC	ENSG00000205838	tier1	-	-	19	0	0.00	22	9	29.03	72	0	0.00	58	18	23.68
FAXC	0	genome.wustl.edu	37	6	99729131	99729131	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	6	99729131	99729131	G	A	SNP	FAXC	ENST00000389677	human	ensembl	74_37	-1	known	missense	c.1139	p.S380F	1.000	NULL	superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	FAXC	HGNC	ENSG00000146267	tier1	-	-	30	0	0.00	57	10	14.93	123	0	0.00	84	17	16.83
SSPO	0	genome.wustl.edu	37	7	149482730	149482730	+	R	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	149482730	149482730	C	G	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.477	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	29	0	0.00	14	7	33.33	29	0	0.00	21	14	40.00
TCERG1L	0	genome.wustl.edu	37	10	132944799	132944799	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	10	132944799	132944799	G	A	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	missense	c.1159	p.P387S	1.000	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1L	HGNC	ENSG00000176769	tier1	-	-	39	0	0.00	15	21	58.33	111	0	0.00	50	28	35.90
SUDS3	0	genome.wustl.edu	37	12	118852390	118852390	+	R	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	12	118852390	118852390	C	A	SNP	SUDS3	ENST00000541591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	SUDS3	HGNC	ENSG00000111707	tier1	-	-	60	0	0.00	40	30	42.86	65	0	0.00	50	23	31.51
TOM1L1	0	genome.wustl.edu	37	17	52992048	52992048	+	Missense_Mutation	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	52992048	52992048	G	T	SNP	TOM1L1	ENST00000575882	human	ensembl	74_37	+1	known	missense	c.547	p.A183S	0.368	pirsf_TOM1	pfam_VHS,pfam_GAT,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_GAT,pfscan_VHS	-	no_errors	TOM1L1	HGNC	ENSG00000141198	tier1	-	-	36	0	0.00	42	12	22.22	108	0	0.00	82	16	16.33
CD46	0	genome.wustl.edu	37	1	207940949	207940949	+	R	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	207940949	207940949	T	C	SNP	CD46	ENST00000469535	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD46	HGNC	ENSG00000117335	tier1	-	-	18	0	0.00	15	11	42.31	120	0	0.00	34	23	40.35
GP6	0	genome.wustl.edu	37	19	55525954	55525954	+	Silent	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	55525954	55525954	T	C	SNP	GP6	ENST00000310373	human	ensembl	74_37	-1	known	silent	c.1359	p.G453	0.000	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053	tier1	-	-	25	0	0.00	6	8	57.14	118	0	0.00	34	35	50.72
NPTXR	0	genome.wustl.edu	37	22	39222606	39222606	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	22	39222606	39222606	C	T	SNP	NPTXR	ENST00000333039	human	ensembl	74_37	-1	known	missense	c.997	p.G333S	0.996	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTXR	HGNC	ENSG00000221890	tier1	-	-	33	0	0.00	55	14	20.29	20	0	0.00	26	9	25.71
MUC16	0	genome.wustl.edu	37	19	9084743	9084743	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	9084743	9084743	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.7072	p.R2358W	0.010	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	36	0	0.00	45	14	23.73	122	0	0.00	102	32	23.70
TRPC3	0	genome.wustl.edu	37	4	122853434	122853434	+	Missense_Mutation	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	4	122853434	122853434	C	G	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	missense	c.979	p.E327Q	1.000	pfam_TRP_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741	tier1	-	-	15	0	0.00	8	15	65.22	71	0	0.00	25	26	50.98
RALGPS2	0	genome.wustl.edu	37	1	178875998	178875998	+	Missense_Mutation	SNP	A	A	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	178875998	178875998	A	G	SNP	RALGPS2	ENST00000367635	human	ensembl	74_37	+1	known	missense	c.1718	p.Q573R	1.000	NULL	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_RasGRF_CDC25	-	no_errors	RALGPS2	HGNC	ENSG00000116191	tier1	-	-	37	0	0.00	44	10	18.52	118	0	0.00	110	24	17.91
CYBB	0	genome.wustl.edu	37	X	37663304	37663304	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	X	37663304	37663304	G	A	SNP	CYBB	ENST00000378588	human	ensembl	74_37	+1	known	missense	c.1072	p.V358I	0.997	pfam_FAD-bd_8,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl	pfam_Fe_red_D-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	CYBB	HGNC	ENSG00000165168	tier1	-	-	60	0	0.00	34	24	41.38	142	0	0.00	33	29	46.77
DH14	0	genome.wustl.edu	37	1	225328548	225328548	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	225328548	225328548	G	A	SNP	DH14	ENST00000430092	human	ensembl	74_37	+1	known	missense	c.4282	p.A1428T	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DH14	HGNC	ENSG00000185842	tier1	-	-	35	0	0.00	11	14	56.00	82	0	0.00	29	16	35.56
LINC01020	0	genome.wustl.edu	37	5	5034574	5034574	+	R	SNP	G	G	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	5	5034574	5034574	G	C	SNP	LINC01020	ENST00000508201	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC01020	HGNC	ENSG00000215231	tier1	-	-	26	0	0.00	45	14	23.73	71	0	0.00	76	18	19.15
MUC12	0	genome.wustl.edu	37	7	100646158	100646158	+	Missense_Mutation	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	100646158	100646158	C	A	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.12314	p.T4105K	0.005	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	77	0	0.00	80	61	43.26	70	0	0.00	42	32	43.24
MYO15A	0	genome.wustl.edu	37	17	18025157	18025157	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	18025157	18025157	G	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	nonsense	c.3043	p.E1015*	0.545	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	41	0	0.00	66	20	23.26	35	0	0.00	61	12	16.44
LRTOMT	0	genome.wustl.edu	37	11	71817014	71817014	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	11	71817014	71817014	C	T	SNP	LRTOMT	ENST00000307198	human	ensembl	74_37	+1	known	missense	c.116	p.A39V	0.998	NULL	pfam_O-MeTrfase_3	-	no_errors	LRTOMT	HGNC	ENSG00000184154	tier1	-	-	43	0	0.00	45	12	21.05	76	0	0.00	68	17	20.00
RHCG	0	genome.wustl.edu	37	15	90023597	90023597	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	15	90023597	90023597	C	T	SNP	RHCG	ENST00000268122	human	ensembl	74_37	-1	known	missense	c.565	p.A189T	1.000	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHCG	HGNC	ENSG00000140519	tier1	-	-	23	0	0.00	22	14	38.89	47	0	0.00	31	19	38.00
TMEM87A	0	genome.wustl.edu	37	15	42553434	42553434	+	Missense_Mutation	SNP	T	T	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	15	42553434	42553434	T	A	SNP	TMEM87A	ENST00000389834	human	ensembl	74_37	-1	known	missense	c.419	p.D140V	0.934	NULL	pfam_TM_rcpt_euk	-	no_errors	TMEM87A	HGNC	ENSG00000103978	tier1	-	-	36	0	0.00	86	18	17.31	47	0	0.00	22	7	24.14
DOCK6	0	genome.wustl.edu	37	19	11347064	11347064	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	11347064	11347064	C	T	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	missense	c.2350	p.V784M	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158	tier1	-	-	39	0	0.00	40	11	21.57	22	0	0.00	15	9	37.50
KIF19	0	genome.wustl.edu	37	17	72339230	72339230	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	72339230	72339230	C	T	SNP	KIF19	ENST00000389916	human	ensembl	74_37	+1	known	silent	c.387	p.N129	0.903	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF19	HGNC	ENSG00000196169	tier1	-	-	32	0	0.00	47	19	28.79	66	0	0.00	47	13	21.67
IRS4	0	genome.wustl.edu	37	X	107977403	107977403	+	Missense_Mutation	SNP	A	A	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	X	107977403	107977403	A	C	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	missense	c.2172	p.N724K	0.100	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124	tier1	-	-	35	0	0.00	22	4	15.38	85	0	0.00	35	14	28.57
MYH11	0	genome.wustl.edu	37	16	15844065	15844065	+	Missense_Mutation	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	16	15844065	15844065	T	C	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.2009	p.K670R	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SRE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392	tier1	-	-	37	0	0.00	39	13	25.00	53	0	0.00	35	11	23.91
OR11G2	0	genome.wustl.edu	37	14	20665795	20665795	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	14	20665795	20665795	C	T	SNP	OR11G2	ENST00000357366	human	ensembl	74_37	+1	known	missense	c.301	p.L101F	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11G2	HGNC	ENSG00000196832	tier1	-	-	36	0	0.00	26	22	45.83	64	0	0.00	10	16	61.54
OR2M5	0	genome.wustl.edu	37	1	248308470	248308470	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	248308470	248308470	C	T	SNP	OR2M5	ENST00000366476	human	ensembl	74_37	+1	known	silent	c.21	p.T7	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M5	HGNC	ENSG00000162727	tier1	-	-	56	0	0.00	25	28	52.83	41	0	0.00	22	16	41.03
MAP3K7	0	genome.wustl.edu	37	6	91269900	91269900	+	Missense_Mutation	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	6	91269900	91269900	G	T	SNP	MAP3K7	ENST00000369329	human	ensembl	74_37	-1	known	missense	c.377	p.T126N	1.000	pirsf_MAPKKK7,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAPKKK7,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K7	HGNC	ENSG00000135341	tier1	-	-	24	0	0.00	26	5	16.13	82	0	0.00	107	32	23.02
TTN	0	genome.wustl.edu	37	2	179426447	179426447	+	Missense_Mutation	SNP	T	T	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	179426447	179426447	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.76708	p.S25570R	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	16	0	0.00	20	5	20.00	115	0	0.00	55	24	30.38
PRLHR	0	genome.wustl.edu	37	10	120353729	120353729	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	10	120353729	120353729	C	T	SNP	PRLHR	ENST00000239032	human	ensembl	74_37	-1	known	missense	c.1028	p.R343H	0.994	pfam_7TM_GPCR_olfarory/Srsx,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PRLHR	HGNC	ENSG00000119973	tier1	-	-	27	0	0.00	8	16	66.67	34	0	0.00	14	5	26.32
ADORA2A-AS1	0	genome.wustl.edu	37	22	24827477	24827477	+	R	SNP	G	G	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	22	24827477	24827477	G	C	SNP	ADORA2A-AS1	ENST00000326341	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	ADORA2A-AS1	HGNC	ENSG00000178803	tier1	-	-	31	0	0.00	38	8	17.39	104	0	0.00	94	15	13.64
IL2RB	0	genome.wustl.edu	37	22	37532384	37532384	+	Missense_Mutation	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	22	37532384	37532384	T	C	SNP	IL2RB	ENST00000216223	human	ensembl	74_37	-1	known	missense	c.587	p.E196G	0.432	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RB	HGNC	ENSG00000100385	tier1	-	-	48	0	0.00	73	12	14.12	48	0	0.00	39	13	25.00
UGT1A4	0	genome.wustl.edu	37	2	234681041	234681041	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	234681041	234681041	G	A	SNP	UGT1A4	ENST00000373409	human	ensembl	74_37	+1	known	missense	c.1441	p.D481N	0.991	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474	tier1	-	-	27	0	0.00	19	11	35.48	56	0	0.00	20	17	45.95
BEST4	0	genome.wustl.edu	37	1	45250616	45250616	+	Silent	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	45250616	45250616	G	A	SNP	BEST4	ENST00000372207	human	ensembl	74_37	-1	known	silent	c.954	p.D318	0.919	pfam_Bestrophin/UPF0187	pfam_Bestrophin/UPF0187	-	no_errors	BEST4	HGNC	ENSG00000142959	tier1	-	-	18	0	0.00	28	8	22.22	67	0	0.00	39	15	27.78
GPT2	0	genome.wustl.edu	37	16	46943701	46943701	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	16	46943701	46943701	G	A	SNP	GPT2	ENST00000340124	human	ensembl	74_37	+1	known	missense	c.682	p.A228T	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GPT2	HGNC	ENSG00000166123	tier1	-	-	31	0	0.00	15	10	40.00	97	0	0.00	14	20	58.82
MYOCD	0	genome.wustl.edu	37	17	12626248	12626248	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	12626248	12626248	C	T	SNP	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	missense	c.338	p.A113V	1.000	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052	tier1	-	-	14	0	0.00	31	45	59.21	118	0	0.00	109	118	51.98
COL4A1	0	genome.wustl.edu	37	13	110839583	110839583	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	13	110839583	110839583	C	A	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	nonsense	c.1630	p.G544*	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498	tier1	-	-	23	0	0.00	38	7	15.56	139	0	0.00	129	24	15.58
AMY2B	0	genome.wustl.edu	37	1	104115688	104115688	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	104115688	104115688	C	T	SNP	AMY2B	ENST00000361355	human	ensembl	74_37	+1	known	missense	c.319	p.R107C	0.095	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,prints_Alpha_amylase	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1	-	-	110	0	0.00	97	37	27.61	35	0	0.00	17	7	29.17
TAAR6	0	genome.wustl.edu	37	6	132892363	132892363	+	Silent	SNP	T	T	C			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	6	132892363	132892363	T	C	SNP	TAAR6	ENST00000275198	human	ensembl	74_37	+1	known	silent	c.903	p.Y301	0.992	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_TAAR_fam	-	no_errors	TAAR6	HGNC	ENSG00000146383	tier1	-	-	37	0	0.00	37	50	57.47	100	0	0.00	53	61	53.51
MYO16	0	genome.wustl.edu	37	13	109858995	109858995	+	Silent	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	13	109858995	109858995	G	T	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	silent	c.5388	p.V1796	0.979	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	tier1	-	-	24	0	0.00	17	24	58.54	52	0	0.00	17	47	73.44
LINS	0	genome.wustl.edu	37	15	101113917	101113917	+	Missense_Mutation	SNP	T	T	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	15	101113917	101113917	T	A	SNP	LINS	ENST00000314742	human	ensembl	74_37	-1	known	missense	c.1161	p.L387F	0.313	NULL	NULL	-	no_errors	LINS	HGNC	ENSG00000140471	tier1	-	-	24	0	0.00	38	22	36.67	91	0	0.00	86	27	23.89
TNIK	0	genome.wustl.edu	37	3	170841407	170841407	+	Missense_Mutation	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	3	170841407	170841407	C	G	SNP	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	missense	c.2098	p.G700R	1.000	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310	tier1	-	-	64	0	0.00	40	22	35.48	121	0	0.00	50	51	50.50
ENSG00000266490	0	genome.wustl.edu	37	17	29119617	29119617	+	R	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	29119617	29119617	C	G	SNP	ENSG00000266490	ENST00000580085	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CTD-2349P21.9	Clone_based_vega_gene	ENSG00000266490	tier1	-	-	27	0	0.00	83	14	14.43	111	0	0.00	182	22	10.78
TXNRD1	0	genome.wustl.edu	37	12	104720164	104720164	+	Missense_Mutation	SNP	A	A	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	12	104720164	104720164	A	T	SNP	TXNRD1	ENST00000429002	human	ensembl	74_37	+1	known	missense	c.1348	p.I450F	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/D,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Thioredoxin/glutathione_Rdtase	pfam_Pyr_nucl-diS_OxRdtase_FAD/D,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_D-bd_dom,pfam_FAD_bind_dom,pfam_Glutaredoxin,superfamily_FAD/D-linked_Rdtase_dimer,superfamily_Thioredoxin-like_fold,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Thioredoxin/glutathione_Rdtase	-	no_errors	TXNRD1	HGNC	ENSG00000198431	tier1	-	-	63	0	0.00	67	43	39.09	66	0	0.00	40	11	21.57
LRCH2	0	genome.wustl.edu	37	X	114347861	114347861	+	Missense_Mutation	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	X	114347861	114347861	C	G	SNP	LRCH2	ENST00000317135	human	ensembl	74_37	-1	known	missense	c.2216	p.R739P	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Leu-rich_rpt,pfam_CH-domain,superfamily_CH-domain,superfamily_-bd_OB-fold,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH2	HGNC	ENSG00000130224	tier1	-	-	71	0	0.00	30	36	54.55	130	0	0.00	30	26	46.43
DAOA	0	genome.wustl.edu	37	13	106119431	106119431	+	Missense_Mutation	SNP	T	T	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	13	106119431	106119431	T	A	SNP	DAOA	ENST00000375936	human	ensembl	74_37	+1	known	missense	c.74	p.F25Y	0.007	NULL	NULL	-	no_errors	DAOA	HGNC	ENSG00000182346	tier1	-	-	23	0	0.00	15	11	42.31	81	0	0.00	28	41	59.42
FER1L6	0	genome.wustl.edu	37	8	124987395	124987395	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	8	124987395	124987395	C	T	SNP	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	nonsense	c.532	p.Q178*	1.000	pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814	tier1	-	-	30	0	0.00	46	8	14.81	94	0	0.00	98	18	15.52
SNORA67	0	genome.wustl.edu	37	17	7482543	7482544	+	R	DEL	AA	AA	-			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	AA	AA	AA	-	AA	AA	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	7482543	7482544	AA	-	DEL	SNORA67	ENST00000581621	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SNORA67	HGNC	ENSG00000264772	tier1			8	0	0.00	7	6	46.15	93	0	0.00	61	16	20.78
PPP1R3A	0	genome.wustl.edu	37	7	113518852	113518852	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	113518852	113518852	G	-	DEL	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	frame_shift_del	c.2295	p.I766fs	1.000	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415	tier1			16	0	0.00	26	6	18.75	97	0	0.00	66	24	26.67
FAM133B	0	genome.wustl.edu	37	7	92207637	92207638	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	-	-	-	T	-	-	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	92207637	92207638	-	T	INS	FAM133B	ENST00000445716	human	ensembl	74_37	-1	known	frame_shift_ins	c.272_271	p.R91fs	1.000:1.000	NULL	NULL	-	no_errors	FAM133B	HGNC	ENSG00000234545	tier1			46	0	0.00	51	17	25.00	67	1	1.47	34	9	20.93
CAC1B	0	genome.wustl.edu	37	9	140941368	140941368	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	9	140941368	140941368	C	T	SNP	CAC1B	ENST00000371355	human	ensembl	74_37	+1	known	silent	c.3429	p.F1143	0.980	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CAC1B	HGNC	ENSG00000148408	tier1	-	-	37	0	0.00	0	46	100.00	46	0	0.00	0	19	100.00
CEP170B	0	genome.wustl.edu	37	14	105353081	105353081	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	14	105353081	105353081	C	T	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	silent	c.2508	p.G836	0.007	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814	tier1	-	-	52	0	0.00	0	54	100.00	54	0	0.00	2	59	96.72
DIP2A	0	genome.wustl.edu	37	21	47976337	47976337	+	Missense_Mutation	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	21	47976337	47976337	C	G	SNP	DIP2A	ENST00000427143	human	ensembl	74_37	+1	known	missense	c.3328	p.L1110V	0.004	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	DIP2A	HGNC	ENSG00000160305	tier1	-	-	17	0	0.00	2	7	77.78	37	0	0.00	4	10	71.43
G6PD	0	genome.wustl.edu	37	X	153763329	153763329	+	R	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	X	153763329	153763329	G	A	SNP	G6PD	ENST00000497281	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.039	-	-	-	no_errors	G6PD	HGNC	ENSG00000160211	tier1	-	-	81	0	0.00	65	29	30.85	11	0	0.00	5	3	37.50
GPT	0	genome.wustl.edu	37	8	145730243	145730243	+	Silent	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	8	145730243	145730243	G	A	SNP	GPT	ENST00000394955	human	ensembl	74_37	+1	known	silent	c.342	p.A114	0.005	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GPT	HGNC	ENSG00000167701	tier1	-	-	117	0	0.00	37	95	71.97	52	0	0.00	9	23	71.88
KLF6	0	genome.wustl.edu	37	10	3827225	3827225	+	R	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	10	3827225	3827225	G	A	SNP	KLF6	ENST00000380946	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.111	-	-	-	no_errors	KLF6	HGNC	ENSG00000067082	tier1	-	-	12	0	0.00	20	8	28.57	15	0	0.00	8	3	27.27
OSCAR	0	genome.wustl.edu	37	19	54598486	54598486	+	Nonstop_Mutation	SNP	T	T	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	54598486	54598486	T	G	SNP	OSCAR	ENST00000356532	human	ensembl	74_37	-1	known	nonstop	c.804	p.*268C	0.889	NULL	smart_Ig_sub	-	no_errors	OSCAR	HGNC	ENSG00000170909	tier1	-	-	83	0	0.00	63	28	30.77	20	0	0.00	7	10	58.82
PPP1R35	0	genome.wustl.edu	37	7	100033348	100033348	+	Missense_Mutation	SNP	A	A	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	100033348	100033348	A	G	SNP	PPP1R35	ENST00000292330	human	ensembl	74_37	-1	known	missense	c.494	p.V165A	1.000	NULL	NULL	-	no_errors	PPP1R35	HGNC	ENSG00000160813	tier1	-	-	42	0	0.00	29	9	23.68	10	0	0.00	6	2	25.00
SHANK1	0	genome.wustl.edu	37	19	51165487	51165487	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	51165487	51165487	C	T	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.6245	p.R2082H	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	30	0	0.00	0	16	100.00	12	0	0.00	0	11	100.00
TIAM1	0	genome.wustl.edu	37	21	32598231	32598231	+	Silent	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	21	32598231	32598231	G	A	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	silent	c.1620	p.T540	0.327	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	rs143707356	-	22	0	0.00	0	26	100.00	66	0	0.00	1	28	93.33
TP53	0	genome.wustl.edu	37	17	7579311	7579311	+	Splice_Site	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	7579311	7579311	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.375+1	e3+1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	59	0	0.00	1	99	99.00	75	0	0.00	0	95	98.96
WIPF2	0	genome.wustl.edu	37	17	38375620	38375621	+	R	INS	-	-	GGCGGC			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	-	-	-	GGCGGC	-	-	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	17	38375620	38375621	-	GGCGGC	INS	WIPF2	ENST00000494757	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994:1.000	-	-	-	no_errors	WIPF2	HGNC	ENSG00000171475	tier1			8	0	0.00	9	3	25.00	8	0	0.00	9	3	25.00
ZNF274	0	genome.wustl.edu	37	19	58723009	58723009	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	58723009	58723009	C	T	SNP	ZNF274	ENST00000326804	human	ensembl	74_37	+1	known	silent	c.933	p.Y311	0.994	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF274	HGNC	ENSG00000171606	tier1	-	-	35	0	0.00	2	21	91.30	50	0	0.00	0	19	95.00
ZNF366	0	genome.wustl.edu	37	5	71756678	71756678	+	Nonsense_Mutation	SNP	T	T	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	5	71756678	71756678	T	A	SNP	ZNF366	ENST00000318442	human	ensembl	74_37	-1	known	nonsense	c.646	p.K216*	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF366	HGNC	ENSG00000178175	tier1	-	-	35	0	0.00	23	9	28.12	37	0	0.00	7	4	36.36
ZDHHC11B	0	genome.wustl.edu	37	5	766963	766963	+	Missense_Mutation	SNP	C	C	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	5	766963	766963	C	A	SNP	ZDHHC11B	ENST00000382776	human	ensembl	74_37	-1	known	missense	c.72	p.L24F	0.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11B	HGNC	ENSG00000206077	tier1	-	-	80	0	0.00	120	18	13.04	72	0	0.00	75	4	5.00
ESPNP	0	genome.wustl.edu	37	1	17029215	17029215	+	R	SNP	G	G	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	1	17029215	17029215	G	T	SNP	ESPNP	ENST00000492551	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.109	-	-	-	no_errors	ESPNP	HGNC	ENSG00000268869	tier1	-	-	81	0	0.00	111	22	16.42	94	1	1.05	121	9	6.92
CYP26A1	0	genome.wustl.edu	37	10	94833762	94833762	+	Missense_Mutation	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	10	94833762	94833762	C	T	SNP	CYP26A1	ENST00000224356	human	ensembl	74_37	+1	known	missense	c.71	p.A24V	0.993	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP26A1	HGNC	ENSG00000095596	tier1	-	-	58	0	0.00	44	4	8.33	22	0	0.00	4	0	0.00
NLRP2	0	genome.wustl.edu	37	19	55494500	55494500	+	Silent	SNP	C	C	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	19	55494500	55494500	C	T	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	silent	c.1434	p.S478	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_CHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556	tier1	-	-	20	0	0.00	2	18	90.00	10	0	0.00	0	0	0.00
TUBA3D	0	genome.wustl.edu	37	2	132240193	132240193	+	Silent	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	132240193	132240193	G	A	SNP	TUBA3D	ENST00000321253	human	ensembl	74_37	+1	known	silent	c.1125	p.V375	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886	tier1	-	-	43	0	0.00	43	25	36.76	10	0	0.00	4	0	0.00
DNM1P47	0	genome.wustl.edu	37	15	102299958	102299958	+	R	SNP	C	C	G			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	15	102299958	102299958	C	G	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	53	0	0.00	73	7	8.75	0	0	0.00	2	0	0.00
ERVW-1	0	genome.wustl.edu	37	7	92099904	92099904	+	R	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	7	92099904	92099904	G	A	SNP	ERVW-1	ENST00000604270	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.579	-	-	-	no_errors	ERVW-1	HGNC	ENSG00000242950	tier1	-	-	18	0	0.00	13	11	45.83	3	0	0.00	2	1	33.33
KIF26A	0	genome.wustl.edu	37	14	104640600	104640600	+	Missense_Mutation	SNP	G	G	A			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	14	104640600	104640600	G	A	SNP	KIF26A	ENST00000423312	human	ensembl	74_37	+1	known	missense	c.2146	p.V716M	0.627	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF26A	HGNC	ENSG00000066735	tier1	-	-	87	0	0.00	101	34	25.19	0	0	0.00	4	0	0.00
POTEM	0	genome.wustl.edu	37	14	20012850	20012850	+	Silent	SNP	A	A	T			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	14	20012850	20012850	A	T	SNP	POTEM	ENST00000547722	human	ensembl	74_37	-1	known	silent	c.906	p.P302	0.030	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537	tier1	rs201036322	-	12	0	0.00	34	12	25.53	0	0	0.00	0	0	0.00
TCP11	0	genome.wustl.edu	37	6	35109033	35109040	+	R	DEL	GCGGCCTG	GCGGCCTG	-			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	GCGGCCTG	GCGGCCTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	6	35109033	35109040	GCGGCCTG	-	DEL	TCP11	ENST00000394696	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000:0.000:0.001:0.002:0.001:0.000:0.000	-	-	-	no_errors	TCP11	HGNC	ENSG00000124678	tier1			0	0	0.00	0	0	0.00	0	0	0.00	0	0	0.00
WDR75	0	genome.wustl.edu	37	2	190327331	190327368	+	Frame_Shift_Del	DEL	TGCAGGAGATTTATTCTGCACTTCTCACTCTGATAATA	TGCAGGAGATTTATTCTGCACTTCTCACTCTGATAATA	-			TCGA-LI-A9QH-01A-11D-A37C-09	TCGA-LI-A9QH-10A-01D-A37F-09	TGCAGGAGATTTATTCTGCACTTCTCACTCTGATAATA	TGCAGGAGATTTATTCTGCACTTCTCACTCTGATAATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	54cb564e-9e29-443c-a113-aeba455a038d	92b531bd-cb9f-4317-b419-14a32eb8ad6a	2	190327331	190327368	TGCAGGAGATTTATTCTGCACTTCTCACTCTGATAATA	-	DEL	WDR75	ENST00000314761	human	ensembl	74_37	+1	known	frame_shift_del	c.900_937	p.A301fs	0.884:0.984:0.969:0.111:1.000:1.000:0.782:0.909:0.963:0.966:0.972:0.999:0.998:1.000:1.000:1.000:1.000:1.000:0.984:1.000:1.000:0.889:0.994:0.998:0.932:1.000:1.000:0.933:0.928:0.924:0.507:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR75	HGNC	ENSG00000115368	tier1			54	0	0.00	20	2	9.09	54	0	0.00	20	2	9.09
