Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
CTNND2	0	genome.wustl.edu	37	5	10973228	10973228	+	R	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	5	10973228	10973228	G	A	SNP	CTNND2	ENST00000495388	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTNND2	HGNC	ENSG00000169862	tier1	-	-	17	0	0.00	23	27	54.00	102	0	0.00	56	42	42.86
FLJ40448	0	genome.wustl.edu	37	16	88809844	88809844	+	R	SNP	A	A	C			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	16	88809844	88809844	A	C	SNP	FLJ40448	ENST00000333666	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP5-1142A6.8	Clone_based_vega_gene	ENSG00000182376	tier1	-	-	43	0	0.00	39	22	36.07	61	0	0.00	31	30	49.18
TRPV6	0	genome.wustl.edu	37	7	142569542	142569542	+	Missense_Mutation	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	7	142569542	142569542	C	T	SNP	TRPV6	ENST00000359396	human	ensembl	74_37	-1	known	missense	c.2096	p.R699Q	0.904	prints_TRPV6_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV6_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV6	HGNC	ENSG00000165125	tier1	-	-	66	0	0.00	46	38	45.24	98	0	0.00	50	26	34.21
EIF4A3	0	genome.wustl.edu	37	17	78111251	78111251	+	Missense_Mutation	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	17	78111251	78111251	G	A	SNP	EIF4A3	ENST00000269349	human	ensembl	74_37	-1	known	missense	c.917	p.S306L	0.986	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_D/R_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_R_helicase_DEAD_Q_motif	-	no_errors	EIF4A3	HGNC	ENSG00000141543	tier1	-	-	37	0	0.00	45	26	36.62	113	0	0.00	44	26	37.14
RNF213	0	genome.wustl.edu	37	17	78337533	78337533	+	Missense_Mutation	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	17	78337533	78337533	C	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.11693	p.S3898F	0.550	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	30	0	0.00	26	26	50.00	38	0	0.00	19	13	40.62
TENM2	0	genome.wustl.edu	37	5	167622271	167622271	+	Silent	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	5	167622271	167622271	C	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.2871	p.Y957	0.435	superfamily_CarboxyPept-like_regulatory,superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	109	0	0.00	131	81	37.85	108	0	0.00	39	40	50.63
SLC22A8	0	genome.wustl.edu	37	11	62767307	62767307	+	Missense_Mutation	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	11	62767307	62767307	G	A	SNP	SLC22A8	ENST00000336232	human	ensembl	74_37	-1	known	missense	c.445	p.R149C	0.998	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A8	HGNC	ENSG00000149452	tier1	-	-	70	0	0.00	63	46	41.82	34	0	0.00	12	13	52.00
GRIN3A	0	genome.wustl.edu	37	9	104449124	104449124	+	Missense_Mutation	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	9	104449124	104449124	C	T	SNP	GRIN3A	ENST00000361820	human	ensembl	74_37	-1	known	missense	c.1058	p.R353H	0.139	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	tier1	-	-	70	0	0.00	48	62	55.86	140	0	0.00	42	45	51.72
ARHGEF37	0	genome.wustl.edu	37	5	149001584	149001584	+	Missense_Mutation	SNP	G	G	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	5	149001584	149001584	G	T	SNP	ARHGEF37	ENST00000333677	human	ensembl	74_37	+1	known	missense	c.1294	p.A432S	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF37	HGNC	ENSG00000183111	tier1	-	-	40	0	0.00	44	16	26.67	57	0	0.00	24	11	31.43
ENSG00000249237	0	genome.wustl.edu	37	1	84815493	84815493	+	R	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	1	84815493	84815493	C	T	SNP	ENSG00000249237	ENST00000505585	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-376N17.4	Clone_based_vega_gene	ENSG00000249237	tier1	-	-	35	0	0.00	40	33	45.21	75	0	0.00	31	20	39.22
DH14	0	genome.wustl.edu	37	1	225525169	225525169	+	Missense_Mutation	SNP	A	A	G			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	1	225525169	225525169	A	G	SNP	DH14	ENST00000430092	human	ensembl	74_37	+1	known	missense	c.10003	p.M3335V	0.997	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DH14	HGNC	ENSG00000185842	tier1	-	-	60	0	0.00	58	53	47.75	60	0	0.00	33	27	45.00
TTN	0	genome.wustl.edu	37	2	179598041	179598041	+	Missense_Mutation	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	2	179598041	179598041	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.12247	p.D4083N	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	39	0	0.00	51	20	28.17	124	0	0.00	57	24	29.63
ABCA9	0	genome.wustl.edu	37	17	66988407	66988407	+	Missense_Mutation	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	17	66988407	66988407	G	A	SNP	ABCA9	ENST00000340001	human	ensembl	74_37	-1	known	missense	c.3625	p.P1209S	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258	tier1	-	-	118	0	0.00	121	66	35.29	139	0	0.00	70	35	33.33
SMOC2	0	genome.wustl.edu	37	6	168999641	168999641	+	Missense_Mutation	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	6	168999641	168999641	G	A	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	missense	c.814	p.V272I	1.000	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562	tier1	-	-	38	0	0.00	64	38	37.25	41	0	0.00	17	21	55.26
WFIKKN1	0	genome.wustl.edu	37	16	683788	683788	+	Missense_Mutation	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	16	683788	683788	G	A	SNP	WFIKKN1	ENST00000319070	human	ensembl	74_37	+1	known	missense	c.1378	p.E460K	0.994	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,pfscan_Netrin_domain	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Ig_V-set,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Immunoglobulin,pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN1	HGNC	ENSG00000127578	tier1	-	-	54	0	0.00	56	62	52.54	61	0	0.00	15	10	40.00
ACTN2	0	genome.wustl.edu	37	1	236911194	236911194	+	R	DEL	C	C	-			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	1	236911194	236911194	C	-	DEL	ACTN2	ENST00000492101	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ACTN2	HGNC	ENSG00000077522	tier1			26	0	0.00	32	20	38.46	166	0	0.00	66	57	46.34
CCDC141	0	genome.wustl.edu	37	2	179721056	179721057	+	Frame_Shift_Ins	INS	-	-	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	-	-	-	T	-	-	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	2	179721056	179721057	-	T	INS	CCDC141	ENST00000420890	human	ensembl	74_37	-1	known	frame_shift_ins	c.2793_2792	p.N931fs	0.999:1.000	NULL	pfam_Ig_I-set,pfam_Spectrin_repeat,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CCDC141	HGNC	ENSG00000163492	tier1			56	0	0.00	60	14	18.92	81	0	0.00	51	16	23.88
NEU4	0	genome.wustl.edu	37	2	242755771	242755771	+	Silent	SNP	G	G	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	2	242755771	242755771	G	T	SNP	NEU4	ENST00000325935	human	ensembl	74_37	+1	known	silent	c.129	p.V43	0.872	superfamily_Sialidases	superfamily_Sialidases	-	no_errors	NEU4	HGNC	ENSG00000204099	tier1	-	-	15	0	0.00	24	8	24.24	9	0	0.00	2	3	60.00
DSG2	0	genome.wustl.edu	37	18	29110997	29110997	+	Silent	SNP	C	C	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	18	29110997	29110997	C	T	SNP	DSG2	ENST00000261590	human	ensembl	74_37	+1	known	silent	c.1062	p.V354	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG2	HGNC	ENSG00000046604	tier1	-	-	77	0	0.00	111	11	9.02	139	0	0.00	96	10	9.43
OR5M10	0	genome.wustl.edu	37	11	56344977	56344977	+	Missense_Mutation	SNP	G	G	T			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	11	56344977	56344977	G	T	SNP	OR5M10	ENST00000526812	human	ensembl	74_37	-1	known	missense	c.221	p.S74Y	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M10	HGNC	ENSG00000254834	tier1	-	-	66	0	0.00	89	41	31.06	105	2	1.87	49	22	30.99
PIEZO1	0	genome.wustl.edu	37	16	88800395	88800395	+	Missense_Mutation	SNP	C	C	G			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	16	88800395	88800395	C	G	SNP	PIEZO1	ENST00000301015	human	ensembl	74_37	-1	novel	missense	c.2248	p.E750Q	0.340	NULL	pfam_Piezo	-	no_errors	PIEZO1	HGNC	ENSG00000103335	tier1	rs202139830	-	28	0	0.00	32	4	11.11	6	0	0.00	4	0	0.00
ZMYM2	0	genome.wustl.edu	37	13	20532979	20532992	+	Splice_Site	DEL	CGGGTGAGGCTTAT	CGGGTGAGGCTTAT	-			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	CGGGTGAGGCTTAT	CGGGTGAGGCTTAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	13	20532979	20532992	CGGGTGAGGCTTAT	-	DEL	ZMYM2	ENST00000382869	human	ensembl	74_37	+1	known	splice_site_del	c.1+4_17	e1-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.966:0.904:0.881:0.710:0.606:0.788	-	-	-	no_errors	ZMYM2	HGNC	ENSG00000121741	tier1			6	0	0.00	2	1	33.33	6	0	0.00	2	1	33.33
BCR	0	genome.wustl.edu	37	22	23658274	23658275	+	R	INS	-	-	TGC			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	22	23658274	23658275	-	TGC	INS	BCR	ENST00000436990	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BCR	HGNC	ENSG00000186716	tier1			45	0	0.00	57	7	10.94	0	0	0.00	0	0	0.00
GALNT6	0	genome.wustl.edu	37	12	51785413	51785414	+	R	INS	-	-	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	12	51785413	51785414	-	A	INS	GALNT6	ENST00000603203	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.005	-	-	-	no_errors	GALNT6	HGNC	ENSG00000139629	tier1			20	0	0.00	15	4	21.05	2	0	0.00	1	0	0.00
LOC100508046	0	genome.wustl.edu	37	14	20010278	20010278	+	R	SNP	T	T	G			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	14	20010278	20010278	T	G	SNP	LOC100508046	ENST00000547584	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-244H18.1	Clone_based_vega_gene	ENSG00000258276	tier1	rs201575309	-	18	0	0.00	27	6	18.18	3	0	0.00	6	0	0.00
PPM1B	0	genome.wustl.edu	37	2	44396279	44396280	+	R	INS	-	-	CGGAGGCGG			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	2	44396279	44396280	-	CGGAGGCGG	INS	PPM1B	ENST00000378540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.999	-	-	-	no_errors	PPM1B	HGNC	ENSG00000138032	tier1			0	0	0.00	0	1	100.00	0	0	0.00	0	1	100.00
SENP3	0	genome.wustl.edu	37	17	7475184	7475184	+	R	SNP	T	T	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	17	7475184	7475184	T	A	SNP	SENP3	ENST00000578813	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	SENP3	HGNC	ENSG00000161956	tier1	-	-	21	0	0.00	31	8	20.00	1	0	0.00	1	0	0.00
SPEG	0	genome.wustl.edu	37	2	220330668	220330669	+	R	INS	-	-	GT			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	2	220330668	220330669	-	GT	INS	SPEG	ENST00000462545	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.003	-	-	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1			20	0	0.00	18	4	18.18	0	0	0.00	0	0	0.00
SIT1	0	genome.wustl.edu	37	9	35649809	35649809	+	R	SNP	G	G	A			TCGA-MJ-A850-01A-11D-A351-09	TCGA-MJ-A850-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d289c714-de51-4192-b307-cf57ec494693	dabaf5ab-f08d-4984-8455-34dbe2b3ee72	9	35649809	35649809	G	A	SNP	SIT1	ENST00000474403	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SIT1	HGNC	ENSG00000137078	tier1	-	-	59	0	0.00	91	8	8.08	50	0	0.00	27	2	6.90
