Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
PRKDC	0	genome.wustl.edu	37	8	48866457	48866457	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	48866457	48866457	G	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.531	p.L177	0.879	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	14	0	0.00	7	11	61.11	66	1	1.49	39	37	48.68
MYH2	0	genome.wustl.edu	37	17	10436721	10436721	+	Silent	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	10436721	10436721	A	G	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.2322	p.G774	1.000	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SRE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	41	0	0.00	17	13	43.33	92	0	0.00	16	20	55.56
NFATC1	0	genome.wustl.edu	37	18	77170842	77170842	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	18	77170842	77170842	C	T	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	silent	c.567	p.Y189	0.595	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_D-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196	tier1	rs140225213	GMAF=0.0005	30	0	0.00	38	5	11.63	40	0	0.00	16	2	11.11
RBBP6	0	genome.wustl.edu	37	16	24583338	24583338	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	24583338	24583338	T	A	SNP	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	missense	c.4951	p.S1651T	0.998	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257	tier1	-	-	18	0	0.00	10	6	37.50	53	0	0.00	43	8	15.69
KIAA1958	0	genome.wustl.edu	37	9	115337138	115337138	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	9	115337138	115337138	A	T	SNP	KIAA1958	ENST00000536272	human	ensembl	74_37	+1	known	missense	c.778	p.I260F	0.998	NULL	pfam_DUF3504,superfamily_Integrase_Lambda-type_N	-	no_errors	KIAA1958	HGNC	ENSG00000165185	tier1	-	-	13	0	0.00	4	6	60.00	77	0	0.00	18	18	50.00
MET	0	genome.wustl.edu	37	7	116397813	116397813	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	116397813	116397813	C	T	SNP	MET	ENST00000318493	human	ensembl	74_37	+1	known	missense	c.2087	p.T696I	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_IPT,superfamily_Ig_E-set,smart_IPT	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MET	HGNC	ENSG00000105976	tier1	-	-	47	0	0.00	27	9	25.00	94	0	0.00	41	28	40.58
CYP11B2	0	genome.wustl.edu	37	8	143994116	143994116	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	143994116	143994116	G	A	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	silent	c.1228	p.L410	0.893	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	56	0	0.00	66	12	15.38	62	0	0.00	34	6	15.00
ZFYVE9	0	genome.wustl.edu	37	1	52744179	52744179	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	52744179	52744179	A	G	SNP	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	missense	c.2762	p.E921G	1.000	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077	tier1	-	-	35	0	0.00	35	31	46.97	70	0	0.00	36	26	41.94
CNR1	0	genome.wustl.edu	37	6	88854252	88854252	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	6	88854252	88854252	C	A	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.742	p.A248S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432	tier1	-	-	8	0	0.00	6	7	53.85	101	0	0.00	48	32	40.00
WDR65	0	genome.wustl.edu	37	1	43650876	43650876	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	43650876	43650876	C	T	SNP	WDR65	ENST00000528956	human	ensembl	74_37	+1	known	missense	c.818	p.A273V	0.000	superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710	tier1	-	-	39	0	0.00	40	7	14.89	94	0	0.00	80	19	19.00
DLGAP2	0	genome.wustl.edu	37	8	1626652	1626652	+	Missense_Mutation	SNP	A	A	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	1626652	1626652	A	C	SNP	DLGAP2	ENST00000421627	human	ensembl	74_37	+1	known	missense	c.2321	p.D774A	0.880	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP2	HGNC	ENSG00000198010	tier1	-	-	54	0	0.00	46	11	19.30	31	0	0.00	22	5	18.52
PCNXL2	0	genome.wustl.edu	37	1	233121872	233121872	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	233121872	233121872	C	T	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.6206	p.G2069D	1.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749	tier1	-	-	35	0	0.00	25	10	28.57	38	0	0.00	26	5	16.13
RBFOX1	0	genome.wustl.edu	37	16	7568226	7568226	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	7568226	7568226	C	A	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	missense	c.234	p.N78K	1.000	pirsf_R-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_R-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328	tier1	-	-	33	0	0.00	8	10	55.56	45	0	0.00	35	9	20.45
PCDHB1	0	genome.wustl.edu	37	5	140433279	140433279	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	140433279	140433279	C	A	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	missense	c.2224	p.Q742K	0.056	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815	tier1	-	-	26	0	0.00	9	11	55.00	48	0	0.00	27	25	48.08
TP53	0	genome.wustl.edu	37	17	7577505	7577505	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	7577505	7577505	T	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.776	p.D259V	1.000	pfam_p53_D-bd,superfamily_p53-like_TF_D-bd	pfam_p53_D-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_D-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	35	0	0.00	9	22	70.97	95	0	0.00	10	38	79.17
NRF1	0	genome.wustl.edu	37	7	129311328	129311328	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	129311328	129311328	C	T	SNP	NRF1	ENST00000393231	human	ensembl	74_37	+1	known	missense	c.283	p.H95Y	1.000	pfam_Nrf1_NLS/D-bd_dimer	pfam_Nrf1_NLS/D-bd_dimer,pfam_Nrf1_activation-bd	-	no_errors	NRF1	HGNC	ENSG00000106459	tier1	-	-	31	0	0.00	26	5	16.13	112	0	0.00	35	13	27.08
PARVB	0	genome.wustl.edu	37	22	44543775	44543775	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	22	44543775	44543775	C	T	SNP	PARVB	ENST00000406477	human	ensembl	74_37	+1	known	silent	c.846	p.A282	1.000	superfamily_CH-domain	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	PARVB	HGNC	ENSG00000188677	tier1	-	-	22	0	0.00	18	7	28.00	74	0	0.00	49	11	18.33
ELAVL3	0	genome.wustl.edu	37	19	11569017	11569017	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	11569017	11569017	G	A	SNP	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	missense	c.572	p.P191L	0.998	smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_R,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_R,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361	tier1	rs148057857	-	35	0	0.00	29	6	17.14	53	0	0.00	34	6	15.00
CHL1	0	genome.wustl.edu	37	3	424203	424203	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	424203	424203	G	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.2025	p.W675C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	41	0	0.00	39	10	20.41	111	0	0.00	44	9	16.98
FGB	0	genome.wustl.edu	37	4	155489556	155489556	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	155489556	155489556	G	A	SNP	FGB	ENST00000302068	human	ensembl	74_37	+1	known	missense	c.742	p.G248R	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGB	HGNC	ENSG00000171564	tier1	-	-	32	0	0.00	12	11	47.83	62	0	0.00	53	28	34.57
CNTN6	0	genome.wustl.edu	37	3	1371493	1371493	+	Missense_Mutation	SNP	G	G	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	1371493	1371493	G	C	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.1238	p.S413T	0.958	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	45	0	0.00	53	7	11.48	105	0	0.00	83	17	17.00
AP3D1	0	genome.wustl.edu	37	19	2115549	2115549	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	2115549	2115549	A	T	SNP	AP3D1	ENST00000355272	human	ensembl	74_37	-1	known	missense	c.2137	p.L713M	0.254	pfam_BLV_receptor,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000	tier1	-	-	32	0	0.00	21	12	36.36	34	0	0.00	24	6	20.00
GIMAP8	0	genome.wustl.edu	37	7	150174802	150174802	+	Missense_Mutation	SNP	T	T	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	150174802	150174802	T	G	SNP	GIMAP8	ENST00000307271	human	ensembl	74_37	+1	known	missense	c.1932	p.I644M	0.000	pfam_AIG1	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP8	HGNC	ENSG00000171115	tier1	-	-	56	0	0.00	37	17	30.91	151	1	0.66	70	24	25.53
KLKB1	0	genome.wustl.edu	37	4	187171526	187171526	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	187171526	187171526	A	T	SNP	KLKB1	ENST00000264690	human	ensembl	74_37	+1	known	missense	c.728	p.Y243F	0.929	pfam_PAN-1_domain,smart_Apple,pfscan_Pan_app,prints_Apple	pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,smart_Apple,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Peptidase_S1,prints_Apple,prints_Peptidase_S1A	-	no_errors	KLKB1	HGNC	ENSG00000164344	tier1	-	-	48	0	0.00	37	10	21.28	84	0	0.00	53	39	42.39
UNC93A	0	genome.wustl.edu	37	6	167728838	167728838	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	6	167728838	167728838	G	T	SNP	UNC93A	ENST00000230256	human	ensembl	74_37	+1	known	silent	c.1272	p.A424	0.000	superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93A	HGNC	ENSG00000112494	tier1	-	-	79	0	0.00	77	22	22.22	144	1	0.68	91	38	29.46
MACF1	0	genome.wustl.edu	37	1	39798401	39798401	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	39798401	39798401	G	A	SNP	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	silent	c.6252	p.Q2084	0.003	superfamily_RNaseH-like_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	13	0	0.00	5	6	54.55	74	0	0.00	18	50	73.53
ZAN	0	genome.wustl.edu	37	7	100344302	100344302	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	100344302	100344302	T	C	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.908	p.L303P	0.089	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	33	0	0.00	9	16	64.00	92	0	0.00	24	22	47.83
TSHZ3	0	genome.wustl.edu	37	19	31769390	31769390	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	31769390	31769390	G	A	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	silent	c.1309	p.L437	0.954	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1	-	-	40	0	0.00	24	10	29.41	69	0	0.00	32	20	37.74
WDHD1	0	genome.wustl.edu	37	14	55480246	55480246	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	14	55480246	55480246	T	A	SNP	WDHD1	ENST00000360586	human	ensembl	74_37	-1	known	missense	c.146	p.K49M	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_DUF3639,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,superfamily_HMG_box_dom,smart_WD40_repeat,smart_HMG_box_dom,pfscan_HMG_box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDHD1	HGNC	ENSG00000198554	tier1	-	-	29	0	0.00	9	7	43.75	92	0	0.00	44	31	41.33
ATP10B	0	genome.wustl.edu	37	5	159992826	159992826	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	159992826	159992826	G	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.4020	p.D1340E	0.921	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	22	0	0.00	12	17	58.62	83	0	0.00	17	36	67.92
PIAS1	0	genome.wustl.edu	37	15	68468089	68468089	+	Frame_Shift_Del	DEL	T	T	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T	T	-	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	15	68468089	68468089	T	-	DEL	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	frame_shift_del	c.1284	p.Y429fs	0.985	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800	tier1			39	0	0.00	23	11	32.35	110	0	0.00	60	24	28.57
DLC1	0	genome.wustl.edu	37	8	12943086	12943087	+	R	DEL	TT	TT	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	TT	TT	TT	-	TT	TT	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	12943086	12943087	TT	-	DEL	DLC1	ENST00000510318	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1			23	0	0.00	23	3	11.54	11	0	0.00	18	2	10.00
COL23A1	0	genome.wustl.edu	37	5	177683352	177683352	+	Splice_Site	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	177683352	177683352	A	T	SNP	COL23A1	ENST00000390654	human	ensembl	74_37	-1	known	splice_site	c.882+2	e15+2	1.000	-	-	-	no_errors	COL23A1	HGNC	ENSG00000050767	tier1	-	-	48	0	0.00	57	26	31.33	19	0	0.00	7	2	22.22
IL2RB	0	genome.wustl.edu	37	22	37524543	37524543	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	22	37524543	37524543	C	T	SNP	IL2RB	ENST00000216223	human	ensembl	74_37	-1	known	missense	c.1249	p.A417T	0.086	NULL	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RB	HGNC	ENSG00000100385	tier1	-	-	29	0	0.00	11	9	45.00	16	0	0.00	9	6	40.00
PIGG	0	genome.wustl.edu	37	4	493032	493032	+	R	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	493032	493032	G	A	SNP	PIGG	ENST00000502311	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PIGG	HGNC	ENSG00000174227	tier1	-	-	15	0	0.00	12	12	50.00	16	0	0.00	6	3	33.33
C1orf198	0	genome.wustl.edu	37	1	231004075	231004075	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	231004075	231004075	G	A	SNP	C1orf198	ENST00000366663	human	ensembl	74_37	-1	known	missense	c.184	p.P62S	1.000	NULL	NULL	-	no_errors	C1orf198	HGNC	ENSG00000119280	tier1	-	-	35	0	0.00	26	4	13.33	12	0	0.00	4	0	0.00
CHPF	0	genome.wustl.edu	37	2	220404162	220404162	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	220404162	220404162	G	T	SNP	CHPF	ENST00000243776	human	ensembl	74_37	-1	known	silent	c.2271	p.G757	1.000	pfam_Chond_Galc	pfam_Chond_Galc	-	no_errors	CHPF	HGNC	ENSG00000123989	tier1	-	-	62	0	0.00	33	4	10.81	41	0	0.00	6	0	0.00
EDF1	0	genome.wustl.edu	37	9	139760677	139760677	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	9	139760677	139760677	G	A	SNP	EDF1	ENST00000224073	human	ensembl	74_37	-1	known	silent	c.34	p.L12	1.000	pfam_MBF1_N	pfam_MBF1_N,pfam_Cro/C1-type_HTH,superfamily_Lambda_D-bd_dom,smart_Cro/C1-type_HTH,pfscan_Cro/C1-type_HTH	-	no_errors	EDF1	HGNC	ENSG00000107223	tier1	-	-	54	0	0.00	18	17	48.57	8	0	0.00	3	0	0.00
HERC2P4	0	genome.wustl.edu	37	16	32163469	32163469	+	R	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	32163469	32163469	G	A	SNP	HERC2P4	ENST00000563904	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267	tier1	-	-	98	0	0.00	52	10	16.13	9	0	0.00	2	0	0.00
INPP5D	0	genome.wustl.edu	37	2	234106746	234106746	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	234106746	234106746	C	T	SNP	INPP5D	ENST00000359570	human	ensembl	74_37	+1	known	missense	c.2663	p.P888L	0.193	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,superfamily_Endo/exonuclease/phosphatase,smart_SH2,smart_IPPc,pfscan_SH2,prints_SH2	-	no_errors	INPP5D	HGNC	ENSG00000168918	tier1	-	-	43	0	0.00	16	4	19.05	30	0	0.00	6	0	0.00
WDR81	0	genome.wustl.edu	37	17	1631292	1631292	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	1631292	1631292	G	A	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	silent	c.3039	p.A1013	0.912	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716	tier1	-	-	25	0	0.00	6	6	50.00	9	0	0.00	1	0	0.00
ENSG00000215954	0	genome.wustl.edu	37	11	112118610	112118619	+	R	DEL	ACACACACAC	ACACACACAC	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	ACACACACAC	ACACACACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	11	112118610	112118619	ACACACACAC	-	DEL	ENSG00000215954	ENST00000401135	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.028:0.021:0.024:0.025:0.042:0.052:0.057:0.059:0.067:0.070	-	-	-	no_errors	AP002884.1	Clone_based_ensembl_gene	ENSG00000215954	tier1			0	0	0.00	0	0	0.00	0	0	0.00	0	0	0.00
ENSG00000230615	0	genome.wustl.edu	37	1	44569973	44569974	+	R	INS	-	-	TCTCCTGGCCCAGAGTCTCCAGCTGCCGCCGCT			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	44569973	44569974	-	TCTCCTGGCCCAGAGTCTCCAGCTGCCGCCGCT	INS	ENSG00000230615	ENST00000434244	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RP5-1198O20.4	Clone_based_vega_gene	ENSG00000230615	tier1			0	0	0.00	4	0	0.00	0	0	0.00	4	0	0.00
FOXK1	0	genome.wustl.edu	37	7	4722449	4722449	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	4722449	4722449	G	T	SNP	FOXK1	ENST00000328914	human	ensembl	74_37	+1	known	silent	c.510	p.V170	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_TF_fork_head,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_TF_fork_head,pfscan_FHA_dom,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXK1	HGNC	ENSG00000164916	tier1	-	-	21	0	0.00	10	10	50.00	3	0	0.00	4	0	0.00
IRF2BPL	0	genome.wustl.edu	37	14	77493792	77493794	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	14	77493792	77493794	TGT	-	DEL	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	in_frame_del	c.344_342	p.Q118in_frame_del	0.050:0.052:0.060	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669	tier1			8	0	0.00	7	5	41.67	0	0	0.00	0	0	0.00
MAML3	0	genome.wustl.edu	37	4	140811111	140811111	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	140811111	140811111	C	T	SNP	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	silent	c.1479	p.Q493	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782	tier1	rs62344937	-	24	0	0.00	22	5	18.52	0	0	0.00	0	1	100.00
PGAM1P5	0	genome.wustl.edu	37	12	96066670	96066670	+	R	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	96066670	96066670	G	T	SNP	PGAM1P5	ENST00000552554	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PGAM1P5	HGNC	ENSG00000257150	tier1	-	-	42	0	0.00	30	14	31.82	1	0	0.00	5	0	0.00
RANBP2	0	genome.wustl.edu	37	2	109368152	109368152	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	109368152	109368152	A	G	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.1624	p.K542E	1.000	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	tier1	-	-	74	0	0.00	47	8	14.29	0	0	0.00	0	0	0.00
WDR59	0	genome.wustl.edu	37	16	74976691	74976691	+	Frame_Shift_Del	DEL	T	T	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	74976691	74976691	T	-	DEL	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	frame_shift_del	c.479	p.N160fs	0.999	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091	tier1			25	0	0.00	22	4	15.38	52	0	0.00	41	2	4.65
NFAT5	0	genome.wustl.edu	37	16	69729107	69729124	+	In_Frame_Del	DEL	GGCCAACCACAAAACGAG	GGCCAACCACAAAACGAG	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	GGCCAACCACAAAACGAG	GGCCAACCACAAAACGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	69729107	69729124	GGCCAACCACAAAACGAG	-	DEL	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	in_frame_del	c.4483_4500	p.QNEGQP1498in_frame_del	1.000:1.000:0.997:1.000:1.000:0.987:1.000:1.000:0.988:1.000:1.000:1.000:0.998:0.985:0.965:1.000:1.000:1.000	NULL	pfam_RHD,superfamily_p53-like_TF_D-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908	tier1			109	0	0.00	58	2	3.33	109	0	0.00	58	2	3.33
