Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AMY2A	0	genome.wustl.edu	37	1	104162336	104162336	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	104162336	104162336	T	G	SNP	AMY2A	ENST00000414303	human	ensembl	74_37	+1	known	missense	c.674	p.I225S	0.954	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2A	HGNC	ENSG00000243480				92	0	0	47	4	7.84314
SLC6A17	0	genome.wustl.edu	37	1	110741056	110741056	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	110741056	110741056	C	T	SNP	SLC6A17	ENST00000331565	human	ensembl	74_37	+1	known	missense	c.2174	p.S725L	1.000	NULL	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A17	HGNC	ENSG00000197106				114	0	0	55	15	21.4286
PRAMEF11	0	genome.wustl.edu	37	1	12885133	12885133	+	Silent	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	12885133	12885133	T	C	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	silent	c.978	p.Q326	0.020	NULL	NULL	-	no_errors	PRAMEF11	HGNC	ENSG00000204513				150	0	0	98	17	14.7826
POGZ	0	genome.wustl.edu	37	1	151378545	151378545	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	151378545	151378545	G	A	SNP	POGZ	ENST00000271715	human	ensembl	74_37	-1	known	missense	c.2966	p.T989I	0.772	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_Znf_C2H2	-	no_errors	POGZ	HGNC	ENSG00000143442				103	0	0	45	28	38.3562
FLG	0	genome.wustl.edu	37	1	152281969	152281969	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	152281969	152281969	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.5393	p.R1798Q	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				654	1	0.152672	394	34	7.94393
INSRR	0	genome.wustl.edu	37	1	156823679	156823679	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	156823679	156823679	C	T	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	missense	c.502	p.V168M	0.997	pirsf_Tyr_kinase_insulin-like_rcpt	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644				53	0	0	24	6	20
CACNA1E	0	genome.wustl.edu	37	1	181724429	181724429	+	Silent	SNP	G	G	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	181724429	181724429	G	C	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	silent	c.3885	p.V1295	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216				116	0	0	96	12	11.1111
HMCN1	0	genome.wustl.edu	37	1	185958651	185958651	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	185958651	185958651	A	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.3080	p.K1027T	0.787	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				124	0	0	66	19	22.3529
LRRN2	0	genome.wustl.edu	37	1	204587730	204587730	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	204587730	204587730	C	T	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.1391	p.R464Q	0.995	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382				82	0	0	40	4	9.09091
E2F2	0	genome.wustl.edu	37	1	23845525	23845525	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	23845525	23845525	C	T	SNP	E2F2	ENST00000361729	human	ensembl	74_37	-1	known	missense	c.835	p.V279M	1.000	NULL	pfam_E2F_TDP	-	no_errors	E2F2	HGNC	ENSG00000007968				84	0	0	47	6	11.3208
MRPS15	0	genome.wustl.edu	37	1	36921446	36921446	+	Silent	SNP	C	C	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	1	36921446	36921446	C	G	SNP	MRPS15	ENST00000373116	human	ensembl	74_37	-1	known	silent	c.717	p.R239	0.000	NULL	pfam_Ribosomal_S15,superfamily_S15_NS1_RNA-bd	-	no_errors	MRPS15	HGNC	ENSG00000116898				180	0	0	97	17	14.9123
INA	0	genome.wustl.edu	37	10	105037351	105037351	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	10	105037351	105037351	C	T	SNP	INA	ENST00000369849	human	ensembl	74_37	+1	known	missense	c.383	p.A128V	1.000	pfam_IF	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin	-	no_errors	INA	HGNC	ENSG00000148798				26	0	0	6	4	40
RGS10	0	genome.wustl.edu	37	10	121285598	121285598	+	Silent	SNP	A	A	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	10	121285598	121285598	A	G	SNP	RGS10	ENST00000369103	human	ensembl	74_37	-1	known	silent	c.201	p.N67	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS10	HGNC	ENSG00000148908				136	0	0	55	6	9.83607
CDH23	0	genome.wustl.edu	37	10	73537641	73537641	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	10	73537641	73537641	C	T	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.5065	p.R1689C	0.397	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				57	0	0	22	6	21.4286
C11orf58	0	genome.wustl.edu	37	11	16776574	16776574	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	11	16776574	16776574	G	A	SNP	C11orf58	ENST00000228136	human	ensembl	74_37	+1	known	missense	c.475	p.E159K	1.000	NULL	NULL	-	no_errors	C11orf58	HGNC	ENSG00000110696				135	0	0	92	8	8
DCHS1	0	genome.wustl.edu	37	11	6652092	6652092	+	Silent	SNP	C	C	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	11	6652092	6652092	C	G	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	silent	c.3933	p.V1311	0.960	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341				13	0	0	2	2	50
TMEM52B	0	genome.wustl.edu	37	12	10339108	10339108	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	12	10339108	10339108	G	T	SNP	TMEM52B	ENST00000381923	human	ensembl	74_37	+1	known	missense	c.227	p.G76V	0.513	NULL	NULL	-	no_errors	TMEM52B	HGNC	ENSG00000165685				121	1	0.819672	45	9	16.6667
PRB3	0	genome.wustl.edu	37	12	11420206	11420206	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	12	11420206	11420206	C	T	SNP	PRB3	ENST00000381842	human	ensembl	74_37	-1	known	missense	c.850	p.A284T	0.000	NULL	NULL	-	no_errors	PRB3	HGNC	ENSG00000197870				216	0	0	136	9	6.2069
KRT75	0	genome.wustl.edu	37	12	52822136	52822136	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	12	52822136	52822136	C	G	SNP	KRT75	ENST00000252245	human	ensembl	74_37	-1	known	missense	c.1286	p.R429P	0.997	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454				119	1	0.833333	16	47	74.6032
CD163	0	genome.wustl.edu	37	12	7640475	7640475	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	12	7640475	7640475	T	G	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	missense	c.1629	p.E543D	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575				118	0	0	63	12	16
N4BP2L2	0	genome.wustl.edu	37	13	33016566	33016566	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	13	33016566	33016566	A	T	SNP	N4BP2L2	ENST00000399396	human	ensembl	74_37	-1	known	missense	c.2108	p.F703Y	0.261	NULL	superfamily_P-loop_NTPase	-	no_errors	N4BP2L2	HGNC	ENSG00000244754				22	0	0	18	3	14.2857
CCDC169-SOHLH2	0	genome.wustl.edu	37	13	36748951	36748951	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	13	36748951	36748951	C	G	SNP	CCDC169-SOHLH2	ENST00000511166	human	ensembl	74_37	-1	known	missense	c.928	p.G310R	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	CCDC169-SOHLH2	HGNC	ENSG00000250709				82	0	0	60	4	6.25
KLF5	0	genome.wustl.edu	37	13	73649903	73649903	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	13	73649903	73649903	A	G	SNP	KLF5	ENST00000377687	human	ensembl	74_37	+1	known	missense	c.1253	p.D418G	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF5	HGNC	ENSG00000102554				102	1	0.970874	45	12	21.0526
IPO5	0	genome.wustl.edu	37	13	98652834	98652834	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	13	98652834	98652834	G	T	SNP	IPO5	ENST00000261574	human	ensembl	74_37	+1	known	missense	c.1097	p.C366F	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N	-	no_errors	IPO5	HGNC	ENSG00000065150				114	1	0.869565	30	30	50
RYR3	0	genome.wustl.edu	37	15	33962623	33962623	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	33962623	33962623	T	G	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.5726	p.V1909G	1.000	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				50	0	0	14	11	44
SQRDL	0	genome.wustl.edu	37	15	45968443	45968443	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	45968443	45968443	C	G	SNP	SQRDL	ENST00000260324	human	ensembl	74_37	+1	known	missense	c.799	p.R267G	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	SQRDL	HGNC	ENSG00000137767				267	1	0.373134	104	20	16.129
SLC12A1	0	genome.wustl.edu	37	15	48500152	48500152	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	48500152	48500152	C	T	SNP	SLC12A1	ENST00000380993	human	ensembl	74_37	+1	known	missense	c.236	p.T79I	0.897	NULL	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt2,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A1	HGNC	ENSG00000074803				78	0	0	58	9	13.4328
LOC645752	0	genome.wustl.edu	37	15	78212571	78212571	+	RNA	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	78212571	78212571	G	A	SNP	LOC645752	ENST00000567226	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-114H24.2	Clone_based_vega_gene	ENSG00000260776				39	0	0	25	7	21.875
BNC1	0	genome.wustl.edu	37	15	83935703	83935703	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	83935703	83935703	C	T	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.320	p.R107H	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594				115	0	0	57	9	13.6364
BNC1	0	genome.wustl.edu	37	15	83936914	83936914	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	83936914	83936914	T	A	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.170	p.D57V	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594				99	0	0	48	6	11.1111
PKD1	0	genome.wustl.edu	37	16	2160623	2160623	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	16	2160623	2160623	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	silent	c.4545	p.H1515	0.000	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				91	0	0	33	9	21.4286
ITGAD	0	genome.wustl.edu	37	16	31424208	31424208	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	16	31424208	31424208	C	T	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	missense	c.1757	p.A586V	0.975	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886				140	0	0	65	7	9.72222
SLX4	0	genome.wustl.edu	37	16	3639156	3639156	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	16	3639156	3639156	C	T	SNP	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	missense	c.4483	p.A1495T	0.005	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827				321	0	0	141	15	9.61538
CDH11	0	genome.wustl.edu	37	16	65038662	65038662	+	Silent	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	16	65038662	65038662	C	T	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	silent	c.111	p.G37	0.985	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937				26	0	0	7	3	30
NOS2	0	genome.wustl.edu	37	17	26097998	26097998	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	26097998	26097998	G	A	SNP	NOS2	ENST00000313735	human	ensembl	74_37	-1	known	missense	c.1750	p.R584W	0.997	pfam_Flavodoxin/NO_synth,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS2	HGNC	ENSG00000007171				49	0	0	24	5	17.2414
RARA	0	genome.wustl.edu	37	17	38498886	38498886	+	RNA	SNP	C	C	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	38498886	38498886	C	A	SNP	RARA	ENST00000579727	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	RARA	HGNC	ENSG00000131759				25	0	0	22	2	8.33333
JUP	0	genome.wustl.edu	37	17	39779266	39779266	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	39779266	39779266	C	T	SNP	JUP	ENST00000540235	human	ensembl	74_37	-1	known	missense	c.928	p.D310N	0.999	pfam_IF	pfam_IF,pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo,pfscan_Armadillo,prints_Keratin_I,prints_Beta-catenin	-	no_errors	JUP	HGNC	ENSG00000173801				158	0	0	39	15	27.7778
MTMR4	0	genome.wustl.edu	37	17	56572740	56572740	+	Silent	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	56572740	56572740	C	T	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	silent	c.2763	p.E921	0.996	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389				143	0	0	76	10	11.6279
TBC1D3P2	0	genome.wustl.edu	37	17	60342186	60342186	+	RNA	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	60342186	60342186	T	C	SNP	TBC1D3P2	ENST00000581291	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062	-	-	-	no_errors	TBC1D3P2	HGNC	ENSG00000188755				23	0	0	17	3	15
TBC1D3P2	0	genome.wustl.edu	37	17	60342197	60342197	+	RNA	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	60342197	60342197	T	C	SNP	TBC1D3P2	ENST00000581291	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.153	-	-	-	no_errors	TBC1D3P2	HGNC	ENSG00000188755				27	0	0	20	3	13.0435
MRC2	0	genome.wustl.edu	37	17	60744158	60744158	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	60744158	60744158	G	T	SNP	MRC2	ENST00000303375	human	ensembl	74_37	+1	known	missense	c.900	p.L300F	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC2	HGNC	ENSG00000011028				82	0	0	21	15	41.6667
EIF5A	0	genome.wustl.edu	37	17	7212989	7212989	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	7212989	7212989	C	T	SNP	EIF5A	ENST00000336452	human	ensembl	74_37	+1	known	missense	c.125	p.A42V	1.000	superfamily_Translation_prot_SH3-like,pirsf_Transl_elong_IF5A	pfam_Transl_elong_IF5A_C,pfam_KOW,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	-	no_errors	EIF5A	HGNC	ENSG00000132507				277	1	0.359712	103	12	10.4348
GPS2	0	genome.wustl.edu	37	17	7217635	7217635	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	7217635	7217635	C	A	SNP	GPS2	ENST00000380728	human	ensembl	74_37	-1	known	nonsense	c.292	p.E98*	1.000	NULL	NULL	-	no_errors	GPS2	HGNC	ENSG00000132522				219	1	0.454545	114	6	5
POLR2A	0	genome.wustl.edu	37	17	7411775	7411775	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	7411775	7411775	G	A	SNP	POLR2A	ENST00000322644	human	ensembl	74_37	+1	known	missense	c.3446	p.R1149Q	0.998	pfam_RNA_pol_Rpb1_5	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_Rpb1_6,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_7,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_II_repeat_euk,smart_RNA_pol_N	-	no_errors	POLR2A	HGNC	ENSG00000181222				14	0	0	9	2	18.1818
GLP2R	0	genome.wustl.edu	37	17	9763299	9763299	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	9763299	9763299	A	G	SNP	GLP2R	ENST00000262441	human	ensembl	74_37	+1	known	missense	c.806	p.Y269C	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GLP2R	HGNC	ENSG00000065325				84	0	0	34	7	17.0732
NWD1	0	genome.wustl.edu	37	19	16860087	16860087	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	16860087	16860087	G	C	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.634	p.A212P	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039				142	1	0.699301	32	35	52.2388
ATP8B3	0	genome.wustl.edu	37	19	1785665	1785665	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	1785665	1785665	C	T	SNP	ATP8B3	ENST00000539485	human	ensembl	74_37	-1	known	missense	c.3226	p.V1076M	0.000	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B3	HGNC	ENSG00000130270				39	0	0	10	3	23.0769
CEP89	0	genome.wustl.edu	37	19	33450824	33450824	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	33450824	33450824	G	A	SNP	CEP89	ENST00000305768	human	ensembl	74_37	-1	known	missense	c.287	p.T96I	0.000	NULL	NULL	-	no_errors	CEP89	HGNC	ENSG00000121289				59	0	0	32	2	5.88235
CIC	0	genome.wustl.edu	37	19	42795827	42795827	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	42795827	42795827	G	C	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.2816	p.G939A	0.998	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				203	0	0	64	25	28.0899
TMC4	0	genome.wustl.edu	37	19	54676754	54676754	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	54676754	54676754	G	C	SNP	TMC4	ENST00000301187	human	ensembl	74_37	-1	known	missense	c.59	p.A20G	0.989	NULL	pfam_TMC	-	no_errors	TMC4	HGNC	ENSG00000167608				364	0	0	165	14	7.82123
PEG3	0	genome.wustl.edu	37	19	57335705	57335705	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	57335705	57335705	G	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	nonsense	c.319	p.R107*	0.792	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				130	0	0	62	22	26.1905
MYO1F	0	genome.wustl.edu	37	19	8613192	8613192	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	8613192	8613192	G	A	SNP	MYO1F	ENST00000338257	human	ensembl	74_37	-1	known	missense	c.1111	p.R371C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347				64	0	0	26	9	25.7143
ZNF426	0	genome.wustl.edu	37	19	9646889	9646889	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	19	9646889	9646889	G	T	SNP	ZNF426	ENST00000253115	human	ensembl	74_37	-1	known	missense	c.20	p.S7Y	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_Znf_C2H2_jaz,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF426	HGNC	ENSG00000130818				90	0	0	30	8	21.0526
CNTNAP5	0	genome.wustl.edu	37	2	125204448	125204448	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	2	125204448	125204448	G	A	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	silent	c.852	p.T284	0.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				118	0	0	46	9	16.3636
ACVR2A	0	genome.wustl.edu	37	2	148657057	148657057	+	Silent	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	2	148657057	148657057	T	C	SNP	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	silent	c.294	p.P98	1.000	pfam_Activin_rcpt,prints_TGFB_receptor	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				155	0	0	69	29	29.5918
TTN	0	genome.wustl.edu	37	2	179634421	179634421	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	2	179634421	179634421	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.8887	p.T2963P	1.000	superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				104	0	0	34	47	58.0247
COL4A3	0	genome.wustl.edu	37	2	228128561	228128561	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	2	228128561	228128561	C	T	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	nonsense	c.1216	p.R406*	0.001	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031				57	0	0	22	14	38.8889
GRIK1	0	genome.wustl.edu	37	21	31062214	31062214	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	21	31062214	31062214	G	A	SNP	GRIK1	ENST00000535441	human	ensembl	74_37	-1	known	silent	c.378	p.L126	0.017	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK1	HGNC	ENSG00000171189				196	0	0	120	27	18.3673
TIAM1	0	genome.wustl.edu	37	21	32638956	32638956	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	21	32638956	32638956	G	A	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	silent	c.333	p.S111	0.822	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299				106	0	0	58	21	26.5823
PIWIL3	0	genome.wustl.edu	37	22	25130080	25130080	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	22	25130080	25130080	G	A	SNP	PIWIL3	ENST00000332271	human	ensembl	74_37	-1	known	missense	c.1678	p.R560W	0.006	superfamily_RNaseH-like_dom	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL3	HGNC	ENSG00000184571				50	0	0	44	3	6.38298
MTMR3	0	genome.wustl.edu	37	22	30398961	30398961	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	22	30398961	30398961	G	A	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.650	p.R217H	1.000	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330				97	0	0	52	3	5.45455
HTR3C	0	genome.wustl.edu	37	3	183772605	183772605	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	183772605	183772605	G	A	SNP	HTR3C	ENST00000318351	human	ensembl	74_37	+1	known	missense	c.164	p.R55H	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3C	HGNC	ENSG00000178084				131	0	0	78	6	7.14286
SATB1	0	genome.wustl.edu	37	3	18390823	18390823	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	18390823	18390823	C	T	SNP	SATB1	ENST00000417717	human	ensembl	74_37	-1	known	missense	c.2227	p.G743S	0.993	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	SATB1	HGNC	ENSG00000182568				336	0	0	148	33	18.232
DYNC1LI1	0	genome.wustl.edu	37	3	32582626	32582626	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	32582626	32582626	G	A	SNP	DYNC1LI1	ENST00000273130	human	ensembl	74_37	-1	known	missense	c.641	p.A214V	0.000	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	-	no_errors	DYNC1LI1	HGNC	ENSG00000144635				149	0	0	98	17	14.7826
SCN10A	0	genome.wustl.edu	37	3	38812885	38812885	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	38812885	38812885	C	A	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.484	p.V162F	0.942	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				108	0	0	72	10	12.1951
SNRK	0	genome.wustl.edu	37	3	43389767	43389767	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	43389767	43389767	G	T	SNP	SNRK	ENST00000296088	human	ensembl	74_37	+1	known	missense	c.2016	p.L672F	0.198	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	SNRK	HGNC	ENSG00000163788				156	0	0	69	10	12.6582
FAM212A	0	genome.wustl.edu	37	3	49842272	49842272	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	49842272	49842272	G	A	SNP	FAM212A	ENST00000333323	human	ensembl	74_37	+1	known	missense	c.716	p.R239K	1.000	NULL	NULL	-	no_errors	FAM212A	HGNC	ENSG00000185614				238	0	0	67	17	20.2381
RBM6	0	genome.wustl.edu	37	3	50103862	50103862	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	50103862	50103862	G	T	SNP	RBM6	ENST00000266022	human	ensembl	74_37	+1	known	missense	c.2870	p.C957F	1.000	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534				291	0	0	109	11	9.16667
CNTN3	0	genome.wustl.edu	37	3	74383974	74383974	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	74383974	74383974	G	A	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	missense	c.1580	p.P527L	0.998	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805				99	0	0	79	8	9.1954
MTMR14	0	genome.wustl.edu	37	3	9743656	9743656	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	9743656	9743656	G	A	SNP	MTMR14	ENST00000296003	human	ensembl	74_37	+1	known	silent	c.1952	p.*651	1.000	NULL	NULL	-	no_errors	MTMR14	HGNC	ENSG00000163719				135	0	0	57	8	12.3077
EGF	0	genome.wustl.edu	37	4	110915914	110915914	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	4	110915914	110915914	G	A	SNP	EGF	ENST00000265171	human	ensembl	74_37	+1	known	silent	c.2883	p.R961	0.014	pirsf_Pro-epidermal_GF	pirsf_Pro-epidermal_GF,pfam_LDLR_classB_rpt,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt	-	no_errors	EGF	HGNC	ENSG00000138798				123	0	0	63	18	22.2222
LRBA	0	genome.wustl.edu	37	4	151242532	151242532	+	RNA	SNP	G	G	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	4	151242532	151242532	G	C	SNP	LRBA	ENST00000503716	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LRBA	HGNC	ENSG00000198589				63	0	0	39	4	9.30233
KLHL5	0	genome.wustl.edu	37	4	39088222	39088222	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	4	39088222	39088222	A	T	SNP	KLHL5	ENST00000359687	human	ensembl	74_37	+1	known	missense	c.1126	p.N376Y	1.000	pfam_BACK,smart_BACK	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL5	HGNC	ENSG00000109790				117	0	0	68	16	19.0476
PSAPL1	0	genome.wustl.edu	37	4	7435637	7435637	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	4	7435637	7435637	C	T	SNP	PSAPL1	ENST00000319098	human	ensembl	74_37	-1	known	missense	c.970	p.V324M	0.230	pirsf_Saposin_chordata,pfam_SapB_1,superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	pirsf_Saposin_chordata,pfam_SapA,pfam_SapB_1,pfam_SapB_2,superfamily_Saposin-like,smart_SapA,smart_SaposinB,prints_Saposin,pfscan_SapA,pfscan_SaposinB	-	no_errors	PSAPL1	HGNC	ENSG00000178597				122	1	0.813008	66	14	17.5
RAPGEF6	0	genome.wustl.edu	37	5	130764705	130764705	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	130764705	130764705	T	C	SNP	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	missense	c.4670	p.N1557S	0.013	NULL	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				117	0	0	108	8	6.89655
BRD8	0	genome.wustl.edu	37	5	137503739	137503739	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	137503739	137503739	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.671	p.S224F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				199	1	0.5	55	53	49.0741
PCDHA3	0	genome.wustl.edu	37	5	140182227	140182227	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	140182227	140182227	C	T	SNP	PCDHA3	ENST00000522353	human	ensembl	74_37	+1	known	missense	c.1445	p.A482V	0.973	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408				247	0	0	132	15	10.2041
PCDHA4	0	genome.wustl.edu	37	5	140187213	140187213	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	140187213	140187213	G	A	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	silent	c.441	p.P147	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967				152	0	0	95	41	30.1471
PCDHGA6	0	genome.wustl.edu	37	5	140753830	140753830	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	140753830	140753830	G	A	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	silent	c.180	p.A60	0.001	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731				121	0	0	61	8	11.5942
IRX4	0	genome.wustl.edu	37	5	1878831	1878831	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	1878831	1878831	G	A	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	missense	c.812	p.P271L	0.486	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430				61	0	0	22	6	21.4286
CDH12	0	genome.wustl.edu	37	5	21975261	21975261	+	Silent	SNP	A	A	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	21975261	21975261	A	G	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	silent	c.465	p.D155	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				131	0	0	96	15	13.5135
PDZD2	0	genome.wustl.edu	37	5	32069712	32069712	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	32069712	32069712	G	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.2489	p.S830N	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				56	0	0	26	7	21.2121
FNDC1	0	genome.wustl.edu	37	6	159644628	159644628	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	6	159644628	159644628	T	C	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.835	p.S279P	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694				69	0	0	39	10	20.4082
PRRC2A	0	genome.wustl.edu	37	6	31599008	31599008	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	6	31599008	31599008	G	A	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	missense	c.2558	p.R853H	0.498	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469				134	0	0	56	18	24.3243
SYNGAP1	0	genome.wustl.edu	37	6	33410696	33410696	+	Silent	SNP	A	A	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	6	33410696	33410696	A	C	SNP	SYNGAP1	ENST00000418600	human	ensembl	74_37	+1	known	silent	c.2367	p.P789	1.000	pfam_DUF3498	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	SYNGAP1	HGNC	ENSG00000197283				202	0	0	105	14	11.7647
ITPR3	0	genome.wustl.edu	37	6	33655296	33655296	+	Silent	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	6	33655296	33655296	G	A	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	silent	c.6219	p.P2073	0.001	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				31	0	0	11	2	15.3846
BAI3	0	genome.wustl.edu	37	6	70042852	70042852	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	6	70042852	70042852	T	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.3140	p.L1047R	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				63	0	0	41	6	12.766
PLEC	0	genome.wustl.edu	37	8	145049472	145049472	+	Silent	SNP	C	C	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	8	145049472	145049472	C	G	SNP	PLEC	ENST00000436759	human	ensembl	74_37	-1	known	silent	c.66	p.S22	0.849	NULL	pfam_Plectin_repeat,pfam_CH-domain,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				117	0	0	41	6	12.766
ADAM7	0	genome.wustl.edu	37	8	24333950	24333950	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	8	24333950	24333950	G	A	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	missense	c.638	p.R213H	0.714	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206				73	0	0	32	5	13.5135
WRN	0	genome.wustl.edu	37	8	30977907	30977907	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	8	30977907	30977907	T	G	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	missense	c.2597	p.V866G	0.006	superfamily_P-loop_NTPase,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392				71	0	0	74	14	15.9091
BRINP1	0	genome.wustl.edu	37	9	121929663	121929663	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	9	121929663	121929663	A	T	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.1985	p.L662Q	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725				228	0	0	110	20	15.3846
STXBP1	0	genome.wustl.edu	37	9	130439015	130439015	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	9	130439015	130439015	G	A	SNP	STXBP1	ENST00000373299	human	ensembl	74_37	+1	known	missense	c.1342	p.V448M	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	STXBP1	HGNC	ENSG00000136854				45	0	0	24	7	22.5806
UBAC1	0	genome.wustl.edu	37	9	138830109	138830109	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	9	138830109	138830109	G	A	SNP	UBAC1	ENST00000371756	human	ensembl	74_37	-1	known	missense	c.1061	p.P354L	0.999	smart_STI1_HS-bd	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC1	HGNC	ENSG00000130560				104	0	0	48	4	7.69231
SSR4	0	genome.wustl.edu	37	X	153062807	153062807	+	RNA	SNP	C	C	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	X	153062807	153062807	C	A	SNP	SSR4	ENST00000482902	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SSR4	HGNC	ENSG00000180879				8	0	0	4	2	33.3333
STS	0	genome.wustl.edu	37	X	7177444	7177444	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	X	7177444	7177444	C	A	SNP	STS	ENST00000217961	human	ensembl	74_37	+1	known	missense	c.452	p.P151H	0.998	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	STS	HGNC	ENSG00000101846				76	0	0	38	3	7.31707
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037835	10037835	+	RNA	SNP	T	T	C			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	Y	10037835	10037835	T	C	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705				40	0	0	18	3	14.2857
ANP32A	0	genome.wustl.edu	37	15	69072347	69072347	+	RNA	DEL	G	G	-			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	15	69072347	69072347	G	-	DEL	ANP32A	ENST00000267918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANP32A	HGNC	ENSG00000140350				13	0	0	4	2	33.3333
SOX9	0	genome.wustl.edu	37	17	70119762	70119763	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	17	70119762	70119763	-	GG	INS	SOX9	ENST00000245479	human	ensembl	74_37	+1	known	frame_shift_ins	c.764_765	p.R257fs	1.000:1.000	NULL	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX9	HGNC	ENSG00000125398				307	0	0	107	21	16.4062
ACVR2A	0	genome.wustl.edu	37	2	148657061	148657072	+	In_Frame_Del	DEL	GTATATTTTTGT	GTATATTTTTGT	-			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	GTATATTTTTGT	GTATATTTTTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	2	148657061	148657072	GTATATTTTTGT	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	in_frame_del	c.298_309	p.VYFC100in_frame_del	1.000:1.000:0.770:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	pfam_Activin_rcpt,prints_TGFB_receptor	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				199	0	0	90	18	16.6667
ZFP36L2	0	genome.wustl.edu	37	2	43452464	43452465	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	2	43452464	43452465	-	G	INS	ZFP36L2	ENST00000282388	human	ensembl	74_37	-1	known	frame_shift_ins	c.479_478	p.R160fs	1.000:1.000	pfam_Znf_CCCH,smart_Znf_CCCH	pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZFP36L2	HGNC	ENSG00000152518				67	0	0	18	6	25
MBNL1	0	genome.wustl.edu	37	3	152017898	152017898	+	RNA	DEL	T	T	-			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	3	152017898	152017898	T	-	DEL	MBNL1	ENST00000461436	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.026	-	-	-	no_errors	MBNL1	HGNC	ENSG00000152601				14	0	0	25	5	16.6667
RAD50	0	genome.wustl.edu	37	5	131915059	131915059	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BR-8367-01A-11D-2340-08	TCGA-BR-8367-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	788a2cc6-835a-4488-8376-d90219cc8b4c	49eedbb4-f152-4cbd-aaf2-cb7cf4d51be0	5	131915059	131915059	A	-	DEL	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	frame_shift_del	c.416	p.M140fs	1.000	superfamily_P-loop_NTPase,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522				60	0	0	55	22	28.5714
