Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CASZ1	0	genome.wustl.edu	37	1	10713858	10713858	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	10713858	10713858	A	G	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.2256	p.A752	0.980	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				66	0	0	47	8	14.5455
GPSM2	0	genome.wustl.edu	37	1	109444457	109444457	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	109444457	109444457	A	C	SNP	GPSM2	ENST00000264126	human	ensembl	74_37	+1	known	missense	c.843	p.E281D	1.000	pfscan_TPR-contain_dom	pfam_GoLoco_motif,pfam_TPR_1,pfam_TPR-4,smart_TPR_repeat,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GPSM2	HGNC	ENSG00000121957				63	0	0	52	8	13.3333
PSMA5	0	genome.wustl.edu	37	1	109954653	109954653	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	109954653	109954653	A	C	SNP	PSMA5	ENST00000484563	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PSMA5	HGNC	ENSG00000143106				43	0	0	39	9	18.75
PSMA5	0	genome.wustl.edu	37	1	109954670	109954670	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	109954670	109954670	A	C	SNP	PSMA5	ENST00000484563	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PSMA5	HGNC	ENSG00000143106				52	0	0	43	9	17.3077
KCNA10	0	genome.wustl.edu	37	1	111060063	111060063	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	111060063	111060063	A	G	SNP	KCNA10	ENST00000369771	human	ensembl	74_37	-1	known	silent	c.1347	p.I449	0.443	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA10	HGNC	ENSG00000143105				61	0	0	37	13	26
MTOR	0	genome.wustl.edu	37	1	11298633	11298633	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	11298633	11298633	A	C	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.1828	p.F610V	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				38	0	0	32	4	11.1111
MTOR	0	genome.wustl.edu	37	1	11303171	11303171	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	11303171	11303171	T	G	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.1412	p.K471T	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				66	0	0	52	20	27.7778
ST7L	0	genome.wustl.edu	37	1	113084544	113084544	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	113084544	113084544	T	G	SNP	ST7L	ENST00000343210	human	ensembl	74_37	-1	known	missense	c.1658	p.D553A	0.880	NULL	pfam_ST7	-	no_errors	ST7L	HGNC	ENSG00000007341				60	0	0	51	4	7.27273
ST7L	0	genome.wustl.edu	37	1	113120988	113120988	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	113120988	113120988	T	G	SNP	ST7L	ENST00000358039	human	ensembl	74_37	-1	known	missense	c.1121	p.K374T	1.000	pfam_ST7	pfam_ST7	-	no_errors	ST7L	HGNC	ENSG00000007341				103	0	0	90	22	19.6429
SYCP1	0	genome.wustl.edu	37	1	115418757	115418757	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	115418757	115418757	A	C	SNP	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	missense	c.725	p.K242T	1.000	pfam_SCP-1	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765				82	0	0	52	13	20
MAD2L2	0	genome.wustl.edu	37	1	11736991	11736991	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	11736991	11736991	T	C	SNP	MAD2L2	ENST00000376669	human	ensembl	74_37	-1	known	silent	c.246	p.K82	0.997	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	-	no_errors	MAD2L2	HGNC	ENSG00000116670				69	0	0	43	5	10.4167
PTGFRN	0	genome.wustl.edu	37	1	117509665	117509665	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	117509665	117509665	A	G	SNP	PTGFRN	ENST00000393203	human	ensembl	74_37	+1	known	missense	c.1772	p.K591R	1.000	smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PTGFRN	HGNC	ENSG00000134247				88	0	0	52	20	27.7778
SPAG17	0	genome.wustl.edu	37	1	118571009	118571009	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	118571009	118571009	T	G	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	missense	c.3618	p.E1206D	0.645	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761				96	0	0	74	27	26.7327
SPAG17	0	genome.wustl.edu	37	1	118629317	118629317	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	118629317	118629317	C	T	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	missense	c.1588	p.A530T	0.917	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761				92	0	0	66	18	21.4286
VPS13D	0	genome.wustl.edu	37	1	12313878	12313878	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	12313878	12313878	T	G	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.664	p.L222V	0.982	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707				114	0	0	74	23	23.7113
PRAMEF11	0	genome.wustl.edu	37	1	12884956	12884956	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	12884956	12884956	A	G	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	silent	c.1155	p.T385	0.000	NULL	NULL	-	no_errors	PRAMEF11	HGNC	ENSG00000204513				353	0	0	297	42	12.3894
PRAMEF5	0	genome.wustl.edu	37	1	13365910	13365910	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	13365910	13365910	A	C	SNP	PRAMEF5	ENST00000376168	human	ensembl	74_37	+1	known	missense	c.354	p.E118D	0.028	NULL	NULL	-	no_errors	PRAMEF5	HGNC	ENSG00000204502				38	0	0	22	10	31.25
PDE4DIP	0	genome.wustl.edu	37	1	144922549	144922549	+	Silent	SNP	G	G	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	144922549	144922549	G	C	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	silent	c.858	p.L286	0.998	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				456	0	0	388	55	12.4153
PDE4DIP	0	genome.wustl.edu	37	1	144952201	144952201	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	144952201	144952201	T	G	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.518	p.K173T	0.999	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				214	0	0	170	9	5.02793
NBPF10	0	genome.wustl.edu	37	1	145297634	145297634	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	145297634	145297634	A	T	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.509	p.E170V	0.000	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386				575	0	0	469	27	5.44355
TXNIP	0	genome.wustl.edu	37	1	145441019	145441019	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	145441019	145441019	A	T	SNP	TXNIP	ENST00000369317	human	ensembl	74_37	+1	known	missense	c.1106	p.E369V	0.998	NULL	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set	-	no_errors	TXNIP	HGNC	ENSG00000117289				211	0	0	141	49	25.7895
NBPF15	0	genome.wustl.edu	37	1	148594490	148594490	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	148594490	148594490	A	C	SNP	NBPF15	ENST00000369187	human	ensembl	74_37	+1	known	missense	c.1863	p.Q621H	0.000	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF15	HGNC	ENSG00000243452				488	0	0	336	55	14.0665
VPS45	0	genome.wustl.edu	37	1	150049167	150049167	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	150049167	150049167	A	C	SNP	VPS45	ENST00000460366	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	VPS45	HGNC	ENSG00000136631				88	0	0	74	14	15.9091
RPRD2	0	genome.wustl.edu	37	1	150443335	150443335	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	150443335	150443335	T	C	SNP	RPRD2	ENST00000369068	human	ensembl	74_37	+1	known	silent	c.1911	p.T637	0.161	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_CID_dom	-	no_errors	RPRD2	HGNC	ENSG00000163125				112	0	0	72	15	17.2414
GABPB2	0	genome.wustl.edu	37	1	151090836	151090836	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	151090836	151090836	A	C	SNP	GABPB2	ENST00000467551	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.886	-	-	-	no_errors	GABPB2	HGNC	ENSG00000143458				15	0	0	8	5	38.4615
POGZ	0	genome.wustl.edu	37	1	151384138	151384138	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	151384138	151384138	T	G	SNP	POGZ	ENST00000271715	human	ensembl	74_37	-1	known	missense	c.1889	p.N630T	1.000	smart_Znf_C2H2-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_Znf_C2H2	-	no_errors	POGZ	HGNC	ENSG00000143442				93	0	0	66	28	29.7872
TCHHL1	0	genome.wustl.edu	37	1	152059288	152059288	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	152059288	152059288	T	G	SNP	TCHHL1	ENST00000368806	human	ensembl	74_37	-1	known	missense	c.870	p.E290D	0.000	NULL	pfam_S100_Ca-bd_sub	-	no_errors	TCHHL1	HGNC	ENSG00000182898				229	0	0	155	51	24.7573
FLG	0	genome.wustl.edu	37	1	152278844	152278844	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	152278844	152278844	T	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.8518	p.T2840S	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				967	0	0	720	100	12.1951
FLG	0	genome.wustl.edu	37	1	152283117	152283117	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	152283117	152283117	T	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.4245	p.Q1415	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				433	0	0	283	90	24.1287
SPRR2D	0	genome.wustl.edu	37	1	153012624	153012624	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	153012624	153012624	A	C	SNP	SPRR2D	ENST00000360379	human	ensembl	74_37	-1	known	missense	c.199	p.C67G	0.945	NULL	NULL	-	no_errors	SPRR2D	HGNC	ENSG00000163216				288	0	0	157	56	26.2911
ADAR	0	genome.wustl.edu	37	1	154561054	154561054	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	154561054	154561054	T	C	SNP	ADAR	ENST00000292205	human	ensembl	74_37	-1	known	missense	c.2987	p.K996R	0.945	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA_A_deaminase,pfam_dsRNA-bd_dom,smart_dsRNA_A_deaminase,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_dsRNA_A_deaminase,pfscan_A_deamin	-	no_errors	ADAR	HGNC	ENSG00000160710				156	0	0	109	32	22.695
ASH1L	0	genome.wustl.edu	37	1	155448496	155448496	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	155448496	155448496	A	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.4165	p.S1389A	0.943	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				98	0	0	51	26	33.7662
ASH1L	0	genome.wustl.edu	37	1	155450488	155450488	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	155450488	155450488	T	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.2173	p.R725G	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				105	0	0	61	13	17.5676
CCDC19	0	genome.wustl.edu	37	1	159842746	159842746	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	159842746	159842746	A	G	SNP	CCDC19	ENST00000368099	human	ensembl	74_37	-1	known	missense	c.1565	p.L522P	0.985	NULL	NULL	-	no_errors	CCDC19	HGNC	ENSG00000213085				68	0	0	45	5	10
CASQ1	0	genome.wustl.edu	37	1	160168757	160168757	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	160168757	160168757	T	G	SNP	CASQ1	ENST00000368078	human	ensembl	74_37	+1	known	missense	c.898	p.L300V	0.967	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	-	no_errors	CASQ1	HGNC	ENSG00000143318				80	0	0	62	17	21.519
OLFML2B	0	genome.wustl.edu	37	1	161969998	161969998	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	161969998	161969998	A	C	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	missense	c.854	p.L285R	0.997	NULL	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745				120	0	0	73	9	10.9756
RXRG	0	genome.wustl.edu	37	1	165406414	165406414	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	165406414	165406414	A	C	SNP	RXRG	ENST00000465764	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RXRG	HGNC	ENSG00000143171				39	0	0	29	9	23.6842
LRRC52	0	genome.wustl.edu	37	1	165532984	165532984	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	165532984	165532984	G	A	SNP	LRRC52	ENST00000294818	human	ensembl	74_37	+1	known	missense	c.865	p.G289R	0.004	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC52	HGNC	ENSG00000162763				117	0	0	75	13	14.7727
ADCY10	0	genome.wustl.edu	37	1	167823637	167823637	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	167823637	167823637	T	C	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	silent	c.2262	p.Q754	0.000	superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199				151	0	0	75	32	29.9065
XCL1	0	genome.wustl.edu	37	1	168550314	168550314	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	168550314	168550314	A	G	SNP	XCL1	ENST00000367818	human	ensembl	74_37	+1	known	silent	c.201	p.K67	0.586	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_XCL1	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_XCL1	-	no_errors	XCL1	HGNC	ENSG00000143184				71	0	0	48	13	21.3115
F5	0	genome.wustl.edu	37	1	169510764	169510764	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	169510764	169510764	T	C	SNP	F5	ENST00000367797	human	ensembl	74_37	-1	known	silent	c.3564	p.P1188	0.431	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734				268	0	0	195	75	27.7778
F5	0	genome.wustl.edu	37	1	169511737	169511737	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	169511737	169511737	T	G	SNP	F5	ENST00000367797	human	ensembl	74_37	-1	known	missense	c.2591	p.K864T	0.000	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734				227	0	0	186	25	11.8483
FMO3	0	genome.wustl.edu	37	1	171086467	171086467	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	171086467	171086467	A	C	SNP	FMO3	ENST00000367755	human	ensembl	74_37	+1	known	missense	c.1484	p.K495T	0.666	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_3,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO3	HGNC	ENSG00000007933				70	0	0	50	16	24.2424
SLC9C2	0	genome.wustl.edu	37	1	173503803	173503803	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	173503803	173503803	A	G	SNP	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	silent	c.1794	p.T598	0.000	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C2	HGNC	ENSG00000162753				29	0	0	28	5	15.1515
PADI4	0	genome.wustl.edu	37	1	17666206	17666206	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	17666206	17666206	A	G	SNP	PADI4	ENST00000375448	human	ensembl	74_37	+1	known	missense	c.550	p.T184A	1.000	pfam_Prot_Arg_deaminase_cen_dom,superfamily_Prot_Arg_deaminase_cen_dom,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI4	HGNC	ENSG00000159339				73	0	0	49	13	20.9677
ANGPTL1	0	genome.wustl.edu	37	1	178834562	178834562	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	178834562	178834562	T	G	SNP	ANGPTL1	ENST00000234816	human	ensembl	74_37	-1	known	missense	c.350	p.K117T	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL1	HGNC	ENSG00000116194				113	0	0	78	35	30.9735
ABL2	0	genome.wustl.edu	37	1	179089374	179089374	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	179089374	179089374	T	G	SNP	ABL2	ENST00000502732	human	ensembl	74_37	-1	known	missense	c.996	p.E332D	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_F-actin_binding,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,pfam_SH3-like_bac-type,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL2	HGNC	ENSG00000143322				156	0	0	125	16	11.3475
ABL2	0	genome.wustl.edu	37	1	179095648	179095648	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	179095648	179095648	T	C	SNP	ABL2	ENST00000502732	human	ensembl	74_37	-1	known	missense	c.551	p.E184G	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_F-actin_binding,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,pfam_SH3-like_bac-type,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL2	HGNC	ENSG00000143322				121	0	0	118	8	6.34921
SOAT1	0	genome.wustl.edu	37	1	179304702	179304702	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	179304702	179304702	T	C	SNP	SOAT1	ENST00000367619	human	ensembl	74_37	+1	known	missense	c.239	p.L80P	1.000	NULL	pfam_MBOAT_fam	-	no_errors	SOAT1	HGNC	ENSG00000057252				84	0	0	58	13	18.3099
GLUL	0	genome.wustl.edu	37	1	182355421	182355421	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	182355421	182355421	A	G	SNP	GLUL	ENST00000311223	human	ensembl	74_37	-1	known	missense	c.445	p.W149R	1.000	pfam_Gln_synth_cat_dom	pfam_Gln_synth_cat_dom,pfam_Gln_synt_beta,superfamily_Gln_synt_beta	-	no_errors	GLUL	HGNC	ENSG00000135821				189	0	0	129	34	20.8589
RGS16	0	genome.wustl.edu	37	1	182572397	182572397	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	182572397	182572397	T	C	SNP	RGS16	ENST00000367558	human	ensembl	74_37	-1	known	missense	c.122	p.K41R	1.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS16	HGNC	ENSG00000143333				159	0	0	106	18	14.5161
DHX9	0	genome.wustl.edu	37	1	182829162	182829162	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	182829162	182829162	A	C	SNP	DHX9	ENST00000367549	human	ensembl	74_37	+1	known	missense	c.1175	p.K392T	1.000	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd	pfam_dsRNA-bd_dom,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_dsRNA-bd_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom	-	no_errors	DHX9	HGNC	ENSG00000135829				129	0	0	110	20	15.3846
PTGS2	0	genome.wustl.edu	37	1	186643498	186643498	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	186643498	186643498	G	A	SNP	PTGS2	ENST00000367468	human	ensembl	74_37	-1	known	missense	c.1802	p.S601L	0.955	NULL	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS2	HGNC	ENSG00000073756				121	0	0	92	15	14.0187
LHX9	0	genome.wustl.edu	37	1	197890706	197890706	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	197890706	197890706	A	C	SNP	LHX9	ENST00000367387	human	ensembl	74_37	+1	known	missense	c.650	p.N217T	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX9	HGNC	ENSG00000143355				46	0	0	22	4	15.3846
CAMSAP2	0	genome.wustl.edu	37	1	200822487	200822487	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	200822487	200822487	A	C	SNP	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	missense	c.3720	p.K1240N	0.977	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200				110	0	0	73	12	14.1176
LAD1	0	genome.wustl.edu	37	1	201355652	201355652	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	201355652	201355652	C	T	SNP	LAD1	ENST00000367313	human	ensembl	74_37	-1	known	silent	c.879	p.P293	0.001	pirsf_Ladinin_1	pirsf_Ladinin_1	-	no_errors	LAD1	HGNC	ENSG00000159166				146	0	0	95	21	18.1034
NAV1	0	genome.wustl.edu	37	1	201751840	201751840	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	201751840	201751840	A	T	SNP	NAV1	ENST00000367296	human	ensembl	74_37	+1	known	missense	c.2200	p.T734S	1.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369				64	0	0	59	14	19.1781
LGR6	0	genome.wustl.edu	37	1	202287259	202287259	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	202287259	202287259	T	A	SNP	LGR6	ENST00000367278	human	ensembl	74_37	+1	known	missense	c.1828	p.L610M	0.236	pfam_GPCR_Rhodpsn	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067				69	0	0	38	16	29.6296
PRELP	0	genome.wustl.edu	37	1	203452402	203452402	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	203452402	203452402	T	C	SNP	PRELP	ENST00000343110	human	ensembl	74_37	+1	known	silent	c.90	p.T30	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PRELP	HGNC	ENSG00000188783				124	0	0	78	14	15.2174
LAX1	0	genome.wustl.edu	37	1	203741246	203741246	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	203741246	203741246	T	A	SNP	LAX1	ENST00000442561	human	ensembl	74_37	+1	known	missense	c.361	p.S121T	0.999	NULL	NULL	-	no_errors	LAX1	HGNC	ENSG00000122188				57	0	0	43	9	17.3077
LRRN2	0	genome.wustl.edu	37	1	204587213	204587213	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	204587213	204587213	A	G	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	silent	c.1908	p.A636	0.421	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382				46	0	0	35	6	14.6341
CR1	0	genome.wustl.edu	37	1	207780607	207780607	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	207780607	207780607	T	G	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	missense	c.5822	p.I1941S	0.594	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710				87	0	0	76	17	18.2796
INTS7	0	genome.wustl.edu	37	1	212161319	212161319	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	212161319	212161319	A	G	SNP	INTS7	ENST00000440600	human	ensembl	74_37	-1	known	silent	c.759	p.T253	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	INTS7	HGNC	ENSG00000143493				35	0	0	27	8	22.8571
PTPN14	0	genome.wustl.edu	37	1	214705946	214705946	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	214705946	214705946	T	G	SNP	PTPN14	ENST00000491277	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.354	-	-	-	no_errors	PTPN14	HGNC	ENSG00000152104				123	0	0	100	16	13.7931
USH2A	0	genome.wustl.edu	37	1	216595645	216595645	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	216595645	216595645	A	C	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.34	p.F12V	0.005	NULL	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				45	0	0	47	21	30.8824
MARC1	0	genome.wustl.edu	37	1	220970082	220970082	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	220970082	220970082	T	G	SNP	MARC1	ENST00000366910	human	ensembl	74_37	+1	known	missense	c.547	p.F183V	0.997	superfamily_Pyrv_Knase-like_insert_dom	pfam_MOSC_N,pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MARC1	HGNC	ENSG00000186205				41	0	0	24	12	33.3333
MARC1	0	genome.wustl.edu	37	1	220978447	220978447	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	220978447	220978447	T	C	SNP	MARC1	ENST00000366910	human	ensembl	74_37	+1	known	silent	c.807	p.A269	0.964	pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	pfam_MOSC_N,pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MARC1	HGNC	ENSG00000186205				143	0	0	80	27	25.2336
LIN9	0	genome.wustl.edu	37	1	226455692	226455692	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	226455692	226455692	A	C	SNP	LIN9	ENST00000328205	human	ensembl	74_37	-1	known	missense	c.830	p.L277R	1.000	NULL	pfam_LIN-9/ALY1	-	no_errors	LIN9	HGNC	ENSG00000183814				51	0	0	36	5	12.1951
URB2	0	genome.wustl.edu	37	1	229771360	229771360	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	229771360	229771360	T	C	SNP	URB2	ENST00000258243	human	ensembl	74_37	+1	known	missense	c.1000	p.C334R	0.996	NULL	pfam_Urb2/Npa2_C	-	no_errors	URB2	HGNC	ENSG00000135763				130	0	0	99	14	12.3894
URB2	0	genome.wustl.edu	37	1	229773272	229773272	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	229773272	229773272	T	G	SNP	URB2	ENST00000258243	human	ensembl	74_37	+1	known	missense	c.2912	p.F971C	0.945	NULL	pfam_Urb2/Npa2_C	-	no_errors	URB2	HGNC	ENSG00000135763				209	0	0	160	34	17.5258
PGBD5	0	genome.wustl.edu	37	1	230486768	230486768	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	230486768	230486768	T	C	SNP	PGBD5	ENST00000321327	human	ensembl	74_37	-1	known	missense	c.920	p.K307R	1.000	NULL	NULL	-	no_errors	PGBD5	HGNC	ENSG00000177614				90	0	0	72	11	13.253
SIPA1L2	0	genome.wustl.edu	37	1	232581415	232581415	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	232581415	232581415	A	G	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	silent	c.3213	p.T1071	0.005	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				100	0	0	50	20	28.5714
PCNXL2	0	genome.wustl.edu	37	1	233136103	233136103	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	233136103	233136103	T	C	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.5276	p.E1759G	1.000	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				128	0	0	82	19	18.8119
SLC35F3	0	genome.wustl.edu	37	1	234452387	234452387	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	234452387	234452387	A	C	SNP	SLC35F3	ENST00000366617	human	ensembl	74_37	+1	known	missense	c.661	p.M221L	1.000	pfam_DMT,pfam_SLC35_F1/F2/F6	pfam_DMT,pfam_Tpt_PEP_trans_dom,pfam_SLC35_F1/F2/F6	-	no_errors	SLC35F3	HGNC	ENSG00000183780				401	0	0	325	41	11.2022
TARBP1	0	genome.wustl.edu	37	1	234541725	234541725	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	234541725	234541725	T	G	SNP	TARBP1	ENST00000040877	human	ensembl	74_37	-1	novel	missense	c.3913	p.S1305R	0.000	superfamily_ARM-type_fold	pfam_SpoU_MeTrfase,superfamily_ARM-type_fold	-	no_errors	TARBP1	HGNC	ENSG00000059588				111	0	0	61	30	32.967
LYST	0	genome.wustl.edu	37	1	235884124	235884124	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	235884124	235884124	T	A	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.9397	p.N3133Y	0.997	pfam_BEACH_dom,superfamily_BEACH_dom,superfamily_ARM-type_fold,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				130	0	0	107	12	10.084
LYST	0	genome.wustl.edu	37	1	235993568	235993568	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	235993568	235993568	T	G	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	silent	c.150	p.R50	0.999	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				77	0	0	61	8	11.5942
ACTN2	0	genome.wustl.edu	37	1	236906233	236906233	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	236906233	236906233	A	G	SNP	ACTN2	ENST00000366578	human	ensembl	74_37	+1	known	missense	c.1145	p.E382G	1.000	pfam_Spectrin_repeat	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN2	HGNC	ENSG00000077522				89	0	0	69	13	15.8537
ACTN2	0	genome.wustl.edu	37	1	236914899	236914899	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	236914899	236914899	A	T	SNP	ACTN2	ENST00000366578	human	ensembl	74_37	+1	known	missense	c.1786	p.S596C	0.564	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN2	HGNC	ENSG00000077522				78	0	0	55	20	26.6667
RYR2	0	genome.wustl.edu	37	1	237754244	237754244	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	237754244	237754244	A	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.4106	p.N1369I	1.000	pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				44	0	0	32	10	23.8095
RYR2	0	genome.wustl.edu	37	1	237777619	237777619	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	237777619	237777619	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.5185	p.E1729K	0.998	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				52	0	0	35	11	23.913
RYR2	0	genome.wustl.edu	37	1	237806735	237806735	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	237806735	237806735	A	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.7324	p.T2442S	0.166	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				89	0	0	70	26	27.0833
CHRM3	0	genome.wustl.edu	37	1	240071166	240071166	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	240071166	240071166	T	A	SNP	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	missense	c.415	p.L139M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019				76	0	0	64	17	20.9877
ADSS	0	genome.wustl.edu	37	1	244587330	244587330	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	244587330	244587330	A	C	SNP	ADSS	ENST00000366535	human	ensembl	74_37	-1	known	missense	c.506	p.V169G	0.996	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	-	no_errors	ADSS	HGNC	ENSG00000035687				44	0	0	42	8	16
C1orf101	0	genome.wustl.edu	37	1	244724442	244724442	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	244724442	244724442	T	G	SNP	C1orf101	ENST00000366531	human	ensembl	74_37	+1	known	missense	c.1049	p.F350C	0.000	NULL	NULL	-	no_errors	C1orf101	HGNC	ENSG00000179397				109	0	0	89	32	26.4463
STPG1	0	genome.wustl.edu	37	1	24727880	24727880	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	24727880	24727880	T	G	SNP	STPG1	ENST00000468303	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	STPG1	HGNC	ENSG00000001460				44	0	0	38	6	13.6364
NLRP3	0	genome.wustl.edu	37	1	247588114	247588114	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	247588114	247588114	A	G	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	missense	c.1369	p.S457G	0.000	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				50	0	0	42	5	10.6383
OR11L1	0	genome.wustl.edu	37	1	248004777	248004777	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	248004777	248004777	C	T	SNP	OR11L1	ENST00000355784	human	ensembl	74_37	-1	known	missense	c.422	p.C141Y	0.147	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR11L1	HGNC	ENSG00000197591				104	0	0	57	11	16.1765
OR2L5	0	genome.wustl.edu	37	1	248186014	248186014	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	248186014	248186014	T	G	SNP	OR2L5	ENST00000355281	human	ensembl	74_37	+1	known	silent	c.765	p.A255	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L5	HGNC	ENSG00000197454				137	0	0	112	36	24.3243
OR2M4	0	genome.wustl.edu	37	1	248402855	248402855	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	248402855	248402855	T	C	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	missense	c.625	p.F209L	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180				105	0	0	71	28	28.2828
OR2G6	0	genome.wustl.edu	37	1	248685651	248685651	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	248685651	248685651	A	G	SNP	OR2G6	ENST00000343414	human	ensembl	74_37	+1	known	missense	c.704	p.Q235R	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G6	HGNC	ENSG00000188558				112	0	0	84	27	24.3243
LIN28A	0	genome.wustl.edu	37	1	26752823	26752823	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	26752823	26752823	C	T	SNP	LIN28A	ENST00000254231	human	ensembl	74_37	+1	known	silent	c.504	p.S168	0.978	superfamily_Znf_CCHC,smart_Znf_CCHC	pfam_CSP_DNA-bd,pfam_Znf_CCHC,superfamily_NA-bd_OB-fold,superfamily_Znf_CCHC,smart_Cold_shock_prot,smart_Znf_CCHC,pfscan_Znf_CCHC,prints_CSP_DNA-bd	-	no_errors	LIN28A	HGNC	ENSG00000131914				100	0	0	44	15	25.4237
MIR1976	0	genome.wustl.edu	37	1	26881043	26881043	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	26881043	26881043	A	C	SNP	MIR1976	ENST00000459548	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR1976	HGNC	ENSG00000238705				129	0	0	75	27	26.4706
ARID1A	0	genome.wustl.edu	37	1	27105610	27105610	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	27105610	27105610	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.5221	p.Q1741*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				163	0	0	135	25	15.625
FGR	0	genome.wustl.edu	37	1	27949577	27949577	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	27949577	27949577	T	A	SNP	FGR	ENST00000374003	human	ensembl	74_37	-1	known	missense	c.305	p.E102V	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FGR	HGNC	ENSG00000000938				56	0	0	35	14	28.5714
ZSCAN20	0	genome.wustl.edu	37	1	33956645	33956645	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	33956645	33956645	A	C	SNP	ZSCAN20	ENST00000361328	human	ensembl	74_37	+1	known	missense	c.787	p.S263R	0.049	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_SANT/Myb,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN20	HGNC	ENSG00000121903				66	0	0	41	8	16.3265
ZMYM6	0	genome.wustl.edu	37	1	35453121	35453121	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	35453121	35453121	A	C	SNP	ZMYM6	ENST00000357182	human	ensembl	74_37	-1	known	missense	c.3562	p.F1188V	0.345	superfamily_RNaseH-like_dom	pfam_Znf_MYM,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM6	HGNC	ENSG00000163867				83	0	0	58	9	13.4328
ZMYM4	0	genome.wustl.edu	37	1	35847321	35847321	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	35847321	35847321	A	G	SNP	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	missense	c.1531	p.K511E	1.000	pfam_Znf_MYM,smart_TRASH_dom	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463				125	0	0	96	21	17.9487
TEKT2	0	genome.wustl.edu	37	1	36552352	36552352	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	36552352	36552352	A	C	SNP	TEKT2	ENST00000207457	human	ensembl	74_37	+1	known	missense	c.536	p.K179T	1.000	pfam_Tektin	pfam_Tektin,superfamily_Prefoldin,prints_Tektin	-	no_errors	TEKT2	HGNC	ENSG00000092850				89	0	0	67	7	9.45946
GRIK3	0	genome.wustl.edu	37	1	37337949	37337949	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	37337949	37337949	A	G	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	missense	c.572	p.L191P	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873				76	0	0	56	11	16.4179
INPP5B	0	genome.wustl.edu	37	1	38328033	38328033	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	38328033	38328033	T	G	SNP	INPP5B	ENST00000373023	human	ensembl	74_37	-1	known	missense	c.2936	p.K979T	1.000	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_Endo/exonuclease/phosphatase,pfam_RhoGAP_dom,superfamily_Endo/exonuclease/phosphatase,superfamily_Rho_GTPase_activation_prot,smart_IPPc,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	INPP5B	HGNC	ENSG00000204084				104	0	0	66	8	10.8108
PABPC4	0	genome.wustl.edu	37	1	40035289	40035289	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	40035289	40035289	T	C	SNP	PABPC4	ENST00000372858	human	ensembl	74_37	-1	known	missense	c.716	p.E239G	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC4	HGNC	ENSG00000090621				141	0	0	92	35	27.5591
TMCO2	0	genome.wustl.edu	37	1	40717105	40717105	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	40717105	40717105	T	G	SNP	TMCO2	ENST00000372766	human	ensembl	74_37	+1	known	missense	c.388	p.L130V	0.879	NULL	NULL	-	no_errors	TMCO2	HGNC	ENSG00000188800				84	0	0	63	12	16
ZNF684	0	genome.wustl.edu	37	1	41012365	41012365	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	41012365	41012365	A	C	SNP	ZNF684	ENST00000372699	human	ensembl	74_37	+1	known	missense	c.370	p.S124R	0.010	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF684	HGNC	ENSG00000117010				47	0	0	45	17	27.4194
HIVEP3	0	genome.wustl.edu	37	1	42048511	42048511	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	42048511	42048511	T	G	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.1958	p.K653T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				139	0	0	92	25	21.3675
SZT2	0	genome.wustl.edu	37	1	43906924	43906924	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	43906924	43906924	A	C	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.7213	p.T2405P	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				270	0	0	177	17	8.76289
EIF2B3	0	genome.wustl.edu	37	1	45392349	45392349	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	45392349	45392349	C	T	SNP	EIF2B3	ENST00000360403	human	ensembl	74_37	-1	known	missense	c.517	p.E173K	1.000	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785				108	0	0	85	18	17.4757
EIF2B3	0	genome.wustl.edu	37	1	45392393	45392393	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	45392393	45392393	A	C	SNP	EIF2B3	ENST00000360403	human	ensembl	74_37	-1	known	missense	c.473	p.I158S	1.000	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785				97	0	0	85	15	15
HECTD3	0	genome.wustl.edu	37	1	45470426	45470426	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	45470426	45470426	T	A	SNP	HECTD3	ENST00000372172	human	ensembl	74_37	-1	known	missense	c.1988	p.K663M	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_APC_su10/DOC_dom,superfamily_HECT,superfamily_Galactose-bd-like,smart_HECT,pfscan_HECT	-	no_errors	HECTD3	HGNC	ENSG00000126107				134	0	0	87	22	20.1835
EFCAB14-AS1	0	genome.wustl.edu	37	1	47152379	47152379	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	47152379	47152379	A	C	SNP	EFCAB14-AS1	ENST00000418985	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	EFCAB14-AS1	HGNC	ENSG00000228237				14	0	0	4	4	50
CYP4Z1	0	genome.wustl.edu	37	1	47534415	47534415	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	47534415	47534415	A	C	SNP	CYP4Z1	ENST00000334194	human	ensembl	74_37	+1	known	missense	c.299	p.K100T	0.212	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4Z1	HGNC	ENSG00000186160				117	0	0	83	36	30.2521
DMRTA2	0	genome.wustl.edu	37	1	50884941	50884941	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	50884941	50884941	T	G	SNP	DMRTA2	ENST00000404795	human	ensembl	74_37	-1	known	missense	c.1025	p.D342A	1.000	pfam_DMA,superfamily_UBA-like	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTA2	HGNC	ENSG00000142700				23	0	0	15	4	21.0526
ZFYVE9	0	genome.wustl.edu	37	1	52703680	52703680	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	52703680	52703680	T	C	SNP	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	silent	c.591	p.F197	1.000	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077				76	0	0	55	19	25.6757
SCP2	0	genome.wustl.edu	37	1	53493736	53493736	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	53493736	53493736	T	C	SNP	SCP2	ENST00000371514	human	ensembl	74_37	+1	known	missense	c.1331	p.L444P	1.000	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_SCP2_sterol-bd_dom,pfam_Thiolase_C,pfam_Thiolase_N,superfamily_Thiolase-like,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2	HGNC	ENSG00000116171				21	0	0	22	5	18.5185
C1orf177	0	genome.wustl.edu	37	1	55279516	55279516	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	55279516	55279516	C	T	SNP	C1orf177	ENST00000371273	human	ensembl	74_37	+1	known	silent	c.792	p.F264	0.921	NULL	NULL	-	no_errors	C1orf177	HGNC	ENSG00000162398				76	0	0	63	10	13.6986
PRKAA2	0	genome.wustl.edu	37	1	57173228	57173228	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	57173228	57173228	A	T	SNP	PRKAA2	ENST00000371244	human	ensembl	74_37	+1	known	missense	c.1501	p.S501C	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKAA2	HGNC	ENSG00000162409				123	0	0	102	41	28.6713
CYP2J2	0	genome.wustl.edu	37	1	60381714	60381714	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	60381714	60381714	A	C	SNP	CYP2J2	ENST00000371204	human	ensembl	74_37	-1	known	missense	c.269	p.L90R	0.001	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2J-like	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2J-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450_E_grp-I_CYP2D-like	-	no_errors	CYP2J2	HGNC	ENSG00000134716				106	1	0.934579	68	8	10.5263
NFIA	0	genome.wustl.edu	37	1	61743219	61743219	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	61743219	61743219	A	G	SNP	NFIA	ENST00000371189	human	ensembl	74_37	+1	known	missense	c.722	p.Q241R	1.000	NULL	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIA	HGNC	ENSG00000162599				105	0	0	66	11	14.2857
KANK4	0	genome.wustl.edu	37	1	62733982	62733982	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	62733982	62733982	T	C	SNP	KANK4	ENST00000371153	human	ensembl	74_37	-1	known	silent	c.2208	p.E736	0.009	NULL	pfam_KN_motif,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK4	HGNC	ENSG00000132854				59	0	0	38	7	15.5556
EFCAB7	0	genome.wustl.edu	37	1	64036736	64036736	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	64036736	64036736	A	C	SNP	EFCAB7	ENST00000371088	human	ensembl	74_37	+1	known	missense	c.1752	p.K584N	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB7	HGNC	ENSG00000203965				97	0	0	88	5	5.37634
PDE4B	0	genome.wustl.edu	37	1	66723184	66723184	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	66723184	66723184	A	C	SNP	PDE4B	ENST00000371048	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDE4B	HGNC	ENSG00000184588				107	0	0	106	16	13.1148
SGIP1	0	genome.wustl.edu	37	1	67142729	67142729	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	67142729	67142729	T	G	SNP	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	missense	c.701	p.I234S	0.834	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473				86	0	0	60	15	20
DIRAS3	0	genome.wustl.edu	37	1	68512291	68512291	+	Nonstop_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	68512291	68512291	T	C	SNP	DIRAS3	ENST00000370981	human	ensembl	74_37	-1	known	nonstop	c.690	p.*230W	0.849	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS3	HGNC	ENSG00000162595				96	0	0	62	18	22.5
RPE65	0	genome.wustl.edu	37	1	68912456	68912456	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	68912456	68912456	A	C	SNP	RPE65	ENST00000262340	human	ensembl	74_37	-1	known	missense	c.182	p.F61C	1.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745				82	0	0	67	8	10.6667
LRRC7	0	genome.wustl.edu	37	1	70503937	70503937	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	70503937	70503937	G	A	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	silent	c.2316	p.S772	0.017	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122				171	0	0	142	46	24.4681
FAM41C	0	genome.wustl.edu	37	1	809844	809844	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	809844	809844	T	G	SNP	FAM41C	ENST00000446136	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.730	-	-	-	no_errors	FAM41C	HGNC	ENSG00000230368				60	0	0	33	12	26.6667
LPHN2	0	genome.wustl.edu	37	1	82445580	82445580	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	82445580	82445580	T	G	SNP	LPHN2	ENST00000370717	human	ensembl	74_37	+1	known	missense	c.3037	p.L1013V	0.962	pfam_GPCR_2_secretin-like,prints_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	LPHN2	HGNC	ENSG00000117114				47	0	0	36	11	23.4043
TTLL7	0	genome.wustl.edu	37	1	84335548	84335548	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	84335548	84335548	A	C	SNP	TTLL7	ENST00000472688	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TTLL7	HGNC	ENSG00000137941				22	0	0	17	7	29.1667
TTLL7	0	genome.wustl.edu	37	1	84387044	84387044	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	84387044	84387044	T	G	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.1176	p.Q392H	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941				73	0	0	39	9	18.75
TTLL7	0	genome.wustl.edu	37	1	84412957	84412957	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	84412957	84412957	T	A	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.356	p.K119M	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941				42	0	0	32	20	38.4615
MCOLN3	0	genome.wustl.edu	37	1	85486830	85486830	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	85486830	85486830	A	C	SNP	MCOLN3	ENST00000370589	human	ensembl	74_37	-1	known	missense	c.1450	p.S484A	1.000	pfam_PKD1_2_channel	pfam_PKD1_2_channel	-	no_errors	MCOLN3	HGNC	ENSG00000055732				91	0	0	41	15	26.7857
SLC2A5	0	genome.wustl.edu	37	1	9101786	9101786	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	9101786	9101786	A	C	SNP	SLC2A5	ENST00000377414	human	ensembl	74_37	-1	known	missense	c.629	p.L210R	0.000	pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Fru_transpt_5,prints_Sugar/inositol_transpt	-	no_errors	SLC2A5	HGNC	ENSG00000142583				68	0	0	42	4	8.69565
BARHL2	0	genome.wustl.edu	37	1	91178170	91178170	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	91178170	91178170	T	C	SNP	BARHL2	ENST00000370445	human	ensembl	74_37	-1	known	missense	c.863	p.K288R	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	BARHL2	HGNC	ENSG00000143032				27	0	0	29	3	9.375
CCDC18	0	genome.wustl.edu	37	1	93667544	93667544	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	93667544	93667544	A	C	SNP	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	missense	c.1148	p.K383T	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483				40	0	0	27	4	12.9032
F3	0	genome.wustl.edu	37	1	94998735	94998735	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	94998735	94998735	T	G	SNP	F3	ENST00000334047	human	ensembl	74_37	-1	known	silent	c.502	p.R168	0.003	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pirsf_Tissue_fac/coagulation_fac-3,prints_Tissue_factor	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pirsf_Tissue_fac/coagulation_fac-3,prints_Tissue_factor	-	no_errors	F3	HGNC	ENSG00000117525				74	0	0	76	9	10.5882
LPPR4	0	genome.wustl.edu	37	1	99771358	99771358	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	99771358	99771358	A	G	SNP	LPPR4	ENST00000370185	human	ensembl	74_37	+1	known	missense	c.1084	p.N362D	0.956	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR4	Uniprot_gn	ENSG00000117600				136	0	0	102	18	15
DNMBP	0	genome.wustl.edu	37	10	101715673	101715673	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	101715673	101715673	T	C	SNP	DNMBP	ENST00000342239	human	ensembl	74_37	-1	known	missense	c.1558	p.R520G	0.000	NULL	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_BAR_dom,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain,prints_p67phox,prints_Spectrin_alpha_SH3	-	no_errors	DNMBP	HGNC	ENSG00000107554				140	0	0	80	44	35.4839
SEC31B	0	genome.wustl.edu	37	10	102267705	102267705	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	102267705	102267705	T	A	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	missense	c.599	p.K200M	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				138	0	0	118	12	9.23077
LZTS2	0	genome.wustl.edu	37	10	102762461	102762461	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	102762461	102762461	T	G	SNP	LZTS2	ENST00000370220	human	ensembl	74_37	+1	known	missense	c.166	p.F56V	1.000	NULL	NULL	-	no_errors	LZTS2	HGNC	ENSG00000107816				86	0	0	35	15	30
LZTS2	0	genome.wustl.edu	37	10	102766282	102766282	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	102766282	102766282	A	C	SNP	LZTS2	ENST00000370220	human	ensembl	74_37	+1	known	missense	c.1367	p.Q456P	1.000	NULL	NULL	-	no_errors	LZTS2	HGNC	ENSG00000107816				26	0	0	20	2	9.09091
LZTS2	0	genome.wustl.edu	37	10	102766292	102766292	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	102766292	102766292	G	C	SNP	LZTS2	ENST00000370220	human	ensembl	74_37	+1	known	missense	c.1377	p.E459D	0.984	NULL	NULL	-	no_errors	LZTS2	HGNC	ENSG00000107816				25	0	0	21	2	8.69565
KCNIP2	0	genome.wustl.edu	37	10	103588422	103588422	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	103588422	103588422	T	G	SNP	KCNIP2	ENST00000461105	human	ensembl	74_37	-1	known	missense	c.425	p.N142T	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	KCNIP2	HGNC	ENSG00000120049				80	0	0	39	19	32.7586
PSD	0	genome.wustl.edu	37	10	104164360	104164360	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	104164360	104164360	C	T	SNP	PSD	ENST00000020673	human	ensembl	74_37	-1	known	missense	c.2680	p.A894T	0.997	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD	HGNC	ENSG00000059915				119	0	0	59	23	28.0488
SFXN2	0	genome.wustl.edu	37	10	104492639	104492639	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	104492639	104492639	A	C	SNP	SFXN2	ENST00000480358	human	ensembl	74_37	+1	known	missense	c.455	p.K152T	0.995	NULL	pfam_Mtc	-	no_errors	SFXN2	HGNC	ENSG00000156398				90	0	0	59	10	14.4928
CYP17A1	0	genome.wustl.edu	37	10	104597033	104597033	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	104597033	104597033	T	A	SNP	CYP17A1	ENST00000369887	human	ensembl	74_37	-1	known	missense	c.86	p.K29M	0.984	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP17A1	HGNC	ENSG00000148795				109	0	0	86	16	15.6863
PDCD11	0	genome.wustl.edu	37	10	105202143	105202143	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	105202143	105202143	T	C	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	silent	c.4881	p.A1627	0.929	smart_HAT	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				115	0	0	78	17	17.8947
GSTO2	0	genome.wustl.edu	37	10	106058929	106058929	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	106058929	106058929	A	T	SNP	GSTO2	ENST00000338595	human	ensembl	74_37	+1	known	missense	c.619	p.M207L	1.000	superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_omega	-	no_errors	GSTO2	HGNC	ENSG00000065621				107	0	0	50	21	29.5775
SORCS3	0	genome.wustl.edu	37	10	106970996	106970996	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	106970996	106970996	T	G	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.2363	p.L788R	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395				45	0	0	48	9	15.7895
DUSP5	0	genome.wustl.edu	37	10	112257917	112257917	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	112257917	112257917	A	G	SNP	DUSP5	ENST00000369583	human	ensembl	74_37	+1	known	missense	c.38	p.K13R	1.000	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP5	HGNC	ENSG00000138166				38	0	0	20	7	25.9259
DUSP5	0	genome.wustl.edu	37	10	112257929	112257929	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	112257929	112257929	A	G	SNP	DUSP5	ENST00000369583	human	ensembl	74_37	+1	known	missense	c.50	p.K17R	1.000	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP5	HGNC	ENSG00000138166				44	0	0	23	7	23.3333
ADRA2A	0	genome.wustl.edu	37	10	112838854	112838854	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	112838854	112838854	A	G	SNP	ADRA2A	ENST00000280155	human	ensembl	74_37	+1	known	missense	c.1100	p.E367G	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2A_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,prints_Musac_Ach_rcpt	-	no_errors	ADRA2A	HGNC	ENSG00000150594				23	0	0	11	4	26.6667
TDRD1	0	genome.wustl.edu	37	10	115959054	115959054	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	115959054	115959054	T	G	SNP	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	silent	c.507	p.T169	0.997	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627				118	0	0	59	29	32.9545
AFAP1L2	0	genome.wustl.edu	37	10	116055820	116055820	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	116055820	116055820	T	A	SNP	AFAP1L2	ENST00000545353	human	ensembl	74_37	-1	known	missense	c.2597	p.E866V	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1L2	HGNC	ENSG00000169129				212	0	0	100	37	27.0073
PNLIP	0	genome.wustl.edu	37	10	118320982	118320982	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	118320982	118320982	A	G	SNP	PNLIP	ENST00000369221	human	ensembl	74_37	+1	known	splice_site	c.1170-2	e11-2	0.989	-	-	-	no_errors	PNLIP	HGNC	ENSG00000175535				64	0	0	43	16	27.1186
UPF2	0	genome.wustl.edu	37	10	12046600	12046600	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	12046600	12046600	A	T	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	missense	c.1433	p.V478D	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461				61	0	0	46	7	13.2075
ZRANB1	0	genome.wustl.edu	37	10	126631424	126631424	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	126631424	126631424	A	G	SNP	ZRANB1	ENST00000359653	human	ensembl	74_37	+1	known	missense	c.362	p.Q121R	1.000	NULL	pfam_OTU,pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_OTU,pfscan_Znf_RanBP2	-	no_errors	ZRANB1	HGNC	ENSG00000019995				102	0	0	87	8	8.42105
C10orf137	0	genome.wustl.edu	37	10	127412388	127412388	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	127412388	127412388	A	C	SNP	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	missense	c.393	p.K131N	1.000	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938				104	0	0	82	42	33.871
C10orf90	0	genome.wustl.edu	37	10	128202463	128202463	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	128202463	128202463	T	G	SNP	C10orf90	ENST00000544758	human	ensembl	74_37	-1	known	missense	c.359	p.K120T	0.843	NULL	NULL	-	no_errors	C10orf90	HGNC	ENSG00000154493				117	0	0	84	32	27.5862
BNIP3	0	genome.wustl.edu	37	10	133787304	133787304	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	133787304	133787304	A	C	SNP	BNIP3	ENST00000368636	human	ensembl	74_37	-1	known	missense	c.190	p.C64G	1.000	pfam_BNIP3	pfam_BNIP3	-	no_errors	BNIP3	HGNC	ENSG00000176171				148	0	0	93	20	17.6991
NKX6-2	0	genome.wustl.edu	37	10	134598505	134598505	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	134598505	134598505	T	G	SNP	NKX6-2	ENST00000368592	human	ensembl	74_37	-1	known	missense	c.749	p.K250T	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	NKX6-2	HGNC	ENSG00000148826				43	0	0	26	4	13.3333
ADARB2-AS1	0	genome.wustl.edu	37	10	1598970	1598970	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	1598970	1598970	T	G	SNP	ADARB2-AS1	ENST00000421697	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADARB2-AS1	HGNC	ENSG00000205696				70	0	0	36	11	23.4043
RSU1	0	genome.wustl.edu	37	10	16635430	16635430	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	16635430	16635430	T	G	SNP	RSU1	ENST00000345264	human	ensembl	74_37	-1	known	missense	c.797	p.K266T	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	RSU1	HGNC	ENSG00000148484				64	0	0	39	15	27.7778
CUBN	0	genome.wustl.edu	37	10	17113591	17113591	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	17113591	17113591	T	G	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.2459	p.E820A	0.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				71	0	0	60	7	10.4478
GPR158	0	genome.wustl.edu	37	10	25887698	25887698	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	25887698	25887698	C	A	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.3143	p.S1048Y	0.057	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				118	0	0	78	17	17.8947
GAD2	0	genome.wustl.edu	37	10	26559570	26559570	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	26559570	26559570	G	A	SNP	GAD2	ENST00000259271	human	ensembl	74_37	+1	known	missense	c.977	p.G326E	1.000	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GAD2	HGNC	ENSG00000136750				184	0	0	109	23	17.4242
WAC	0	genome.wustl.edu	37	10	28899749	28899749	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	28899749	28899749	A	C	SNP	WAC	ENST00000354911	human	ensembl	74_37	+1	known	missense	c.1287	p.Q429H	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WAC	HGNC	ENSG00000095787				125	0	0	109	12	9.91736
KIF5B	0	genome.wustl.edu	37	10	32317437	32317437	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	32317437	32317437	T	C	SNP	KIF5B	ENST00000302418	human	ensembl	74_37	-1	known	silent	c.1644	p.K548	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5B	HGNC	ENSG00000170759				89	0	0	68	12	15
FZD8	0	genome.wustl.edu	37	10	35930201	35930201	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	35930201	35930201	T	C	SNP	FZD8	ENST00000374694	human	ensembl	74_37	-1	known	missense	c.157	p.M53V	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD8	HGNC	ENSG00000177283				53	0	0	38	10	20.8333
ENSG00000234864	0	genome.wustl.edu	37	10	43199520	43199520	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	43199520	43199520	A	C	SNP	ENSG00000234864	ENST00000439913	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	AL022344.5	Clone_based_vega_gene	ENSG00000234864				66	0	0	33	12	26.6667
BMS1	0	genome.wustl.edu	37	10	43312891	43312891	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	43312891	43312891	A	G	SNP	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	silent	c.2529	p.G843	1.000	pfam_BMS1_TSR1_C	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733				75	0	0	55	18	24.6575
OR13A1	0	genome.wustl.edu	37	10	45799853	45799853	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	45799853	45799853	C	T	SNP	OR13A1	ENST00000374401	human	ensembl	74_37	-1	known	silent	c.18	p.E6	0.686	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13A1	HGNC	ENSG00000256574				103	0	0	73	22	23.1579
RBP3	0	genome.wustl.edu	37	10	48385883	48385883	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	48385883	48385883	T	G	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	missense	c.3209	p.K1070T	1.000	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618				140	0	0	71	36	33.6449
ERCC6	0	genome.wustl.edu	37	10	50678232	50678232	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	50678232	50678232	T	G	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	missense	c.3774	p.K1258N	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				243	1	0.409836	203	23	10.177
FBXO18	0	genome.wustl.edu	37	10	5957404	5957404	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	5957404	5957404	A	C	SNP	FBXO18	ENST00000379999	human	ensembl	74_37	+1	known	missense	c.1588	p.K530Q	1.000	superfamily_P-loop_NTPase	pfam_UvrD-like_ATP-bd,pfam_F-box_dom,superfamily_P-loop_NTPase,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO18	HGNC	ENSG00000134452				54	0	0	37	15	28.8462
RHOBTB1	0	genome.wustl.edu	37	10	62648482	62648482	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	62648482	62648482	T	A	SNP	RHOBTB1	ENST00000337910	human	ensembl	74_37	-1	known	missense	c.944	p.K315M	1.000	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB1	HGNC	ENSG00000072422				111	0	0	89	15	14.4231
PRKCQ	0	genome.wustl.edu	37	10	6540451	6540451	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	6540451	6540451	T	C	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.449	p.K150R	1.000	pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675				81	0	0	50	26	34.2105
HERC4	0	genome.wustl.edu	37	10	69748461	69748461	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	69748461	69748461	A	C	SNP	HERC4	ENST00000395198	human	ensembl	74_37	-1	known	missense	c.1765	p.F589V	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC4	HGNC	ENSG00000148634				151	0	0	122	11	8.27068
RUFY2	0	genome.wustl.edu	37	10	70139223	70139223	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	70139223	70139223	T	G	SNP	RUFY2	ENST00000388768	human	ensembl	74_37	-1	known	missense	c.1268	p.K423T	1.000	NULL	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	RUFY2	HGNC	ENSG00000204130				73	0	0	49	10	16.9492
CDH23	0	genome.wustl.edu	37	10	73548718	73548718	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	73548718	73548718	T	G	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.5857	p.F1953V	0.954	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				67	0	0	31	9	22.5
AP3M1	0	genome.wustl.edu	37	10	75884219	75884219	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	75884219	75884219	T	G	SNP	AP3M1	ENST00000355264	human	ensembl	74_37	-1	known	missense	c.1075	p.N359H	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP3M1	HGNC	ENSG00000185009				81	0	0	63	9	12.5
KCNMA1	0	genome.wustl.edu	37	10	78943197	78943197	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	78943197	78943197	A	C	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	missense	c.790	p.L264V	1.000	pfam_Ion_trans_dom	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113				47	0	0	38	11	22.449
ZMIZ1	0	genome.wustl.edu	37	10	81060527	81060527	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	81060527	81060527	A	G	SNP	ZMIZ1	ENST00000334512	human	ensembl	74_37	+1	known	missense	c.1847	p.E616G	1.000	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ1	HGNC	ENSG00000108175				47	0	0	40	3	6.97674
MINPP1	0	genome.wustl.edu	37	10	89272956	89272956	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	89272956	89272956	T	A	SNP	MINPP1	ENST00000371996	human	ensembl	74_37	+1	known	missense	c.911	p.V304D	1.000	pfam_His_Pase_superF_clade-2,pirsf_Histidine_acid_Pase_euk	pfam_His_Pase_superF_clade-2,pirsf_Histidine_acid_Pase_euk	-	no_errors	MINPP1	HGNC	ENSG00000107789				76	0	0	74	6	7.5
LIPJ	0	genome.wustl.edu	37	10	90356123	90356123	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	90356123	90356123	T	G	SNP	LIPJ	ENST00000371939	human	ensembl	74_37	+1	known	missense	c.526	p.L176V	0.000	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPJ	HGNC	ENSG00000204022				46	0	0	30	8	21.0526
LIPF	0	genome.wustl.edu	37	10	90428495	90428495	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	90428495	90428495	T	A	SNP	LIPF	ENST00000394375	human	ensembl	74_37	+1	known	missense	c.434	p.V145D	0.000	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPF	HGNC	ENSG00000182333				42	0	0	30	4	11.7647
IFIT5	0	genome.wustl.edu	37	10	91177197	91177197	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	91177197	91177197	A	C	SNP	IFIT5	ENST00000371795	human	ensembl	74_37	+1	known	missense	c.241	p.I81L	0.288	smart_TPR_repeat	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT5	HGNC	ENSG00000152778				61	0	0	68	4	5.55556
HTR7	0	genome.wustl.edu	37	10	92508893	92508893	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	92508893	92508893	A	G	SNP	HTR7	ENST00000336152	human	ensembl	74_37	-1	known	missense	c.998	p.V333A	0.999	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	HTR7	HGNC	ENSG00000148680				66	0	0	52	14	21.2121
BTAF1	0	genome.wustl.edu	37	10	93741866	93741866	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	93741866	93741866	A	T	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	missense	c.1932	p.Q644H	0.994	pfam_DUF3535,superfamily_ARM-type_fold	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564				55	0	0	59	10	14.4928
FFAR4	0	genome.wustl.edu	37	10	95326534	95326534	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	95326534	95326534	A	C	SNP	FFAR4	ENST00000371483	human	ensembl	74_37	+1	known	missense	c.57	p.Q19H	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	FFAR4	HGNC	ENSG00000186188				22	0	0	16	4	20
TM9SF3	0	genome.wustl.edu	37	10	98303924	98303924	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	98303924	98303924	A	C	SNP	TM9SF3	ENST00000371142	human	ensembl	74_37	-1	known	missense	c.1094	p.L365R	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF3	HGNC	ENSG00000077147				62	0	0	54	15	21.7391
SLIT1	0	genome.wustl.edu	37	10	98806540	98806540	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	98806540	98806540	T	C	SNP	SLIT1	ENST00000266058	human	ensembl	74_37	-1	known	missense	c.1724	p.N575S	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_EG-like_dom,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT1	HGNC	ENSG00000187122				81	0	0	46	8	14.8148
TRPC6	0	genome.wustl.edu	37	11	101375353	101375353	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	101375353	101375353	T	G	SNP	TRPC6	ENST00000344327	human	ensembl	74_37	-1	known	missense	c.347	p.K116T	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC6_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC6	HGNC	ENSG00000137672				131	0	0	129	38	22.7545
ENSG00000254506	0	genome.wustl.edu	37	11	101465542	101465542	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	101465542	101465542	A	C	SNP	ENSG00000254506	ENST00000527374	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.925	-	-	-	no_errors	RP11-748H22.1	Clone_based_vega_gene	ENSG00000254506				25	0	0	29	7	19.4444
C11orf70	0	genome.wustl.edu	37	11	101953825	101953825	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	101953825	101953825	T	G	SNP	C11orf70	ENST00000434758	human	ensembl	74_37	+1	known	silent	c.699	p.P233	0.997	NULL	NULL	-	no_errors	C11orf70	HGNC	ENSG00000137691				114	0	0	113	19	14.3939
MMP27	0	genome.wustl.edu	37	11	102567157	102567157	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	102567157	102567157	A	G	SNP	MMP27	ENST00000260229	human	ensembl	74_37	-1	known	silent	c.847	p.L283	0.158	superfamily_Hemopexin-like_dom,pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP27	HGNC	ENSG00000137675				95	0	0	92	27	22.6891
MMP27	0	genome.wustl.edu	37	11	102573756	102573756	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	102573756	102573756	T	G	SNP	MMP27	ENST00000260229	human	ensembl	74_37	-1	known	missense	c.435	p.K145N	0.000	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP27	HGNC	ENSG00000137675				131	0	0	154	34	18.0851
MMP12	0	genome.wustl.edu	37	11	102742578	102742578	+	RNA	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	102742578	102742578	A	T	SNP	MMP12	ENST00000326227	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	MMP12	HGNC	ENSG00000110347				25	0	0	24	4	14.2857
DYNC2H1	0	genome.wustl.edu	37	11	103058252	103058252	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	103058252	103058252	A	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.7077	p.K2359N	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				79	0	0	99	20	16.8067
CARD17	0	genome.wustl.edu	37	11	104971470	104971470	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	104971470	104971470	C	T	SNP	CARD17	ENST00000375707	human	ensembl	74_37	-1	known	missense	c.44	p.R15H	0.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	-	no_errors	CARD17	HGNC	ENSG00000255221				243	0	0	256	26	9.21986
MRVI1	0	genome.wustl.edu	37	11	10622466	10622466	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	10622466	10622466	A	T	SNP	MRVI1	ENST00000421747	human	ensembl	74_37	-1	known	silent	c.1989	p.S663	1.000	pfam_MRVI1	pfam_MRVI1	-	no_errors	MRVI1	HGNC	ENSG00000072952				88	0	0	53	8	13.1148
EXPH5	0	genome.wustl.edu	37	11	108380425	108380425	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	108380425	108380425	T	C	SNP	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	missense	c.5809	p.S1937G	0.011	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723				111	0	0	101	26	20.4724
DDX10	0	genome.wustl.edu	37	11	108559688	108559688	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	108559688	108559688	T	G	SNP	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	missense	c.874	p.Y292D	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105				171	0	0	193	17	8.09524
C11orf88	0	genome.wustl.edu	37	11	111405169	111405169	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	111405169	111405169	A	C	SNP	C11orf88	ENST00000529167	human	ensembl	74_37	+1	known	missense	c.513	p.K171N	0.038	NULL	NULL	-	no_errors	C11orf88	HGNC	ENSG00000183644				75	0	0	81	14	14.7368
LAYN	0	genome.wustl.edu	37	11	111431129	111431129	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	111431129	111431129	A	C	SNP	LAYN	ENST00000375615	human	ensembl	74_37	+1	known	missense	c.1095	p.Q365H	0.001	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	LAYN	HGNC	ENSG00000204381				91	0	0	86	10	10.4167
DIXDC1	0	genome.wustl.edu	37	11	111856042	111856042	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	111856042	111856042	A	C	SNP	DIXDC1	ENST00000440460	human	ensembl	74_37	+1	known	missense	c.1002	p.Q334H	0.988	NULL	pfam_DIX,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_DIX,pfscan_CH-domain,pfscan_DIX	-	no_errors	DIXDC1	HGNC	ENSG00000150764				31	0	0	33	4	10.8108
NXPE1	0	genome.wustl.edu	37	11	114392898	114392898	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	114392898	114392898	T	G	SNP	NXPE1	ENST00000424269	human	ensembl	74_37	-1	known	missense	c.1436	p.N479T	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE1	HGNC	ENSG00000095110				108	0	0	75	67	47.1831
APOA1	0	genome.wustl.edu	37	11	116706799	116706799	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	116706799	116706799	G	A	SNP	APOA1	ENST00000236850	human	ensembl	74_37	-1	known	missense	c.529	p.R177C	0.042	pfam_ApoA1_A4_E	pfam_ApoA1_A4_E	-	no_errors	APOA1	HGNC	ENSG00000118137				38	0	0	15	21	58.3333
SIDT2	0	genome.wustl.edu	37	11	117060709	117060709	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	117060709	117060709	C	T	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	silent	c.1524	p.N508	1.000	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577				99	0	0	79	5	5.95238
DSCAML1	0	genome.wustl.edu	37	11	117389449	117389449	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	117389449	117389449	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	silent	c.1422	p.F474	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				47	0	0	31	3	8.82353
DSCAML1	0	genome.wustl.edu	37	11	117391952	117391952	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	117391952	117391952	T	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.1286	p.E429V	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				180	0	0	119	37	23.7179
ENSG00000254844	0	genome.wustl.edu	37	11	117691429	117691429	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	117691429	117691429	A	C	SNP	ENSG00000254844	ENST00000531850	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-728F11.3	Clone_based_vega_gene	ENSG00000254844				71	0	0	55	16	22.5352
TBCEL	0	genome.wustl.edu	37	11	120957516	120957516	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	120957516	120957516	A	C	SNP	TBCEL	ENST00000422003	human	ensembl	74_37	+1	known	missense	c.986	p.K329T	1.000	NULL	pfscan_Ubiquitin_supergroup	-	no_errors	TBCEL	HGNC	ENSG00000154114				47	0	0	35	12	25.5319
TECTA	0	genome.wustl.edu	37	11	121039448	121039448	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	121039448	121039448	A	G	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.5813	p.K1938R	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				154	1	0.645161	112	40	26.3158
OR6T1	0	genome.wustl.edu	37	11	123814347	123814347	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	123814347	123814347	A	G	SNP	OR6T1	ENST00000321252	human	ensembl	74_37	-1	known	missense	c.199	p.S67P	0.227	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499				142	0	0	143	34	19.209
OR8G5	0	genome.wustl.edu	37	11	124134872	124134872	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	124134872	124134872	T	G	SNP	OR8G5	ENST00000524943	human	ensembl	74_37	+1	known	silent	c.150	p.V50	0.523	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G5	HGNC	ENSG00000255298				69	0	0	66	4	5.71429
SLC37A2	0	genome.wustl.edu	37	11	124952150	124952150	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	124952150	124952150	A	G	SNP	SLC37A2	ENST00000308074	human	ensembl	74_37	+1	known	missense	c.896	p.E299G	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC37A2	HGNC	ENSG00000134955				135	0	0	151	8	5.03145
HYLS1	0	genome.wustl.edu	37	11	125769999	125769999	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	125769999	125769999	C	T	SNP	HYLS1	ENST00000356438	human	ensembl	74_37	+1	known	missense	c.736	p.L246F	0.999	NULL	NULL	-	no_errors	HYLS1	HGNC	ENSG00000198331				95	0	0	68	16	19.0476
ARHGAP32	0	genome.wustl.edu	37	11	128842931	128842931	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	128842931	128842931	T	C	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	missense	c.3428	p.H1143R	0.021	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				264	0	0	272	22	7.48299
BARX2	0	genome.wustl.edu	37	11	129321257	129321257	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	129321257	129321257	A	C	SNP	BARX2	ENST00000281437	human	ensembl	74_37	+1	known	missense	c.800	p.E267A	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	BARX2	HGNC	ENSG00000043039				100	0	0	88	22	20
TMEM45B	0	genome.wustl.edu	37	11	129727278	129727278	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	129727278	129727278	T	G	SNP	TMEM45B	ENST00000281441	human	ensembl	74_37	+1	known	missense	c.641	p.F214C	1.000	pfam_DUF716_TMEM45	pfam_DUF716_TMEM45	-	no_errors	TMEM45B	HGNC	ENSG00000151715				146	0	0	146	17	10.4294
ZBTB44	0	genome.wustl.edu	37	11	130131610	130131610	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	130131610	130131610	A	C	SNP	ZBTB44	ENST00000357899	human	ensembl	74_37	-1	known	missense	c.159	p.S53R	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB44	HGNC	ENSG00000196323				140	0	0	129	18	12.2449
ARNTL	0	genome.wustl.edu	37	11	13388329	13388329	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	13388329	13388329	A	T	SNP	ARNTL	ENST00000403290	human	ensembl	74_37	+1	known	missense	c.670	p.T224S	1.000	pfam_PAS_fold,superfamily_PAS	pfam_PAS_fold,pfam_PAS_fold_3,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	ARNTL	HGNC	ENSG00000133794				72	0	0	47	8	14.5455
NCAPD3	0	genome.wustl.edu	37	11	134026966	134026966	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	134026966	134026966	T	C	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	missense	c.4199	p.E1400G	0.931	pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503				138	1	0.719424	154	9	5.52147
ENSG00000255470	0	genome.wustl.edu	37	11	18210593	18210593	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	18210593	18210593	A	C	SNP	ENSG00000255470	ENST00000527671	human	ensembl	74_37	-1	novel	missense	c.325	p.L109V	0.986	NULL	NULL	-	no_errors	RP11-113D6.6	Clone_based_vega_gene	ENSG00000255470				35	0	0	26	4	13.3333
UEVLD	0	genome.wustl.edu	37	11	18553752	18553752	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	18553752	18553752	A	C	SNP	UEVLD	ENST00000540666	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.882	-	-	-	no_errors	UEVLD	HGNC	ENSG00000151116				23	0	0	33	4	10.8108
SYT8	0	genome.wustl.edu	37	11	1857751	1857751	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	1857751	1857751	C	G	SNP	SYT8	ENST00000381968	human	ensembl	74_37	+1	known	missense	c.655	p.P219A	0.069	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT8	HGNC	ENSG00000149043				46	0	0	27	3	10
TNNT3	0	genome.wustl.edu	37	11	1955136	1955136	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	1955136	1955136	A	G	SNP	TNNT3	ENST00000493234	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TNNT3	HGNC	ENSG00000130595				62	0	0	26	12	31.5789
NAV2	0	genome.wustl.edu	37	11	19955499	19955499	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	19955499	19955499	A	T	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.1778	p.K593I	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833				98	0	0	83	15	15.3061
SLC17A6	0	genome.wustl.edu	37	11	22396414	22396414	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	22396414	22396414	A	T	SNP	SLC17A6	ENST00000263160	human	ensembl	74_37	+1	known	missense	c.1155	p.R385S	0.991	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A6	HGNC	ENSG00000091664				236	1	0.421941	218	35	13.834
SLC5A12	0	genome.wustl.edu	37	11	26725161	26725161	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	26725161	26725161	A	C	SNP	SLC5A12	ENST00000396005	human	ensembl	74_37	-1	known	silent	c.738	p.T246	0.583	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A12	HGNC	ENSG00000148942				136	0	0	124	7	5.34351
BDNF	0	genome.wustl.edu	37	11	27679542	27679542	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	27679542	27679542	A	C	SNP	BDNF	ENST00000438929	human	ensembl	74_37	-1	known	silent	c.816	p.G272	1.000	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pfscan_Nerve_growth_factor-rel,prints_Brain-der_neurotrophic_factor	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pfscan_Nerve_growth_factor-rel,prints_Brain-der_neurotrophic_factor,prints_Nerve_growth_factor-rel	-	no_errors	BDNF	HGNC	ENSG00000176697				237	0	0	138	52	27.3684
BDNF	0	genome.wustl.edu	37	11	27679792	27679792	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	27679792	27679792	A	G	SNP	BDNF	ENST00000438929	human	ensembl	74_37	-1	known	missense	c.566	p.L189P	1.000	prints_Brain-der_neurotrophic_factor	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pfscan_Nerve_growth_factor-rel,prints_Brain-der_neurotrophic_factor,prints_Nerve_growth_factor-rel	-	no_errors	BDNF	HGNC	ENSG00000176697				103	0	0	63	28	30.7692
WT1-AS	0	genome.wustl.edu	37	11	32460413	32460413	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	32460413	32460413	T	G	SNP	WT1-AS	ENST00000395900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	WT1-AS	HGNC	ENSG00000183242				22	0	0	25	5	16.6667
PAMR1	0	genome.wustl.edu	37	11	35547122	35547122	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	35547122	35547122	A	G	SNP	PAMR1	ENST00000278360	human	ensembl	74_37	-1	known	silent	c.12	p.G4	0.620	NULL	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_EG-like_dom,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	PAMR1	HGNC	ENSG00000149090				28	0	0	18	5	21.7391
ART5	0	genome.wustl.edu	37	11	3660051	3660051	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	3660051	3660051	G	A	SNP	ART5	ENST00000397067	human	ensembl	74_37	-1	known	missense	c.715	p.P239S	0.785	NULL	pfam_ART,prints_ART	-	no_errors	ART5	HGNC	ENSG00000167311				65	0	0	50	5	9.09091
NUP98	0	genome.wustl.edu	37	11	3712682	3712682	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	3712682	3712682	A	C	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.4349	p.L1450R	1.000	pfam_Nup96	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713				69	0	0	51	17	25
SYT13	0	genome.wustl.edu	37	11	45265838	45265838	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	45265838	45265838	T	G	SNP	SYT13	ENST00000020926	human	ensembl	74_37	-1	known	missense	c.1046	p.K349T	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT13	HGNC	ENSG00000019505				67	0	0	45	10	18.1818
AGBL2	0	genome.wustl.edu	37	11	47689161	47689161	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	47689161	47689161	T	G	SNP	AGBL2	ENST00000357610	human	ensembl	74_37	-1	known	missense	c.2308	p.N770H	0.000	NULL	pfam_Peptidase_M14	-	no_errors	AGBL2	HGNC	ENSG00000165923				88	0	0	61	8	11.5942
OR51A4	0	genome.wustl.edu	37	11	4967444	4967444	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	4967444	4967444	T	C	SNP	OR51A4	ENST00000380373	human	ensembl	74_37	-1	known	missense	c.887	p.K296R	0.280	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51A4	HGNC	ENSG00000205497				126	0	0	100	28	21.875
OR51L1	0	genome.wustl.edu	37	11	5020534	5020534	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	5020534	5020534	A	G	SNP	OR51L1	ENST00000321543	human	ensembl	74_37	+1	known	missense	c.322	p.T108A	0.138	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51L1	HGNC	ENSG00000176798				185	0	0	116	44	27.5
OR51L1	0	genome.wustl.edu	37	11	5021063	5021063	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	5021063	5021063	T	C	SNP	OR51L1	ENST00000321543	human	ensembl	74_37	+1	known	missense	c.851	p.L284P	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51L1	HGNC	ENSG00000176798				95	0	0	71	23	24.4681
OR51V1	0	genome.wustl.edu	37	11	5220987	5220987	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	5220987	5220987	A	G	SNP	OR51V1	ENST00000321255	human	ensembl	74_37	-1	known	missense	c.944	p.L315P	0.003	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51V1	HGNC	ENSG00000176742				61	0	0	33	12	26.6667
OR51Q1	0	genome.wustl.edu	37	11	5444107	5444107	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	5444107	5444107	A	C	SNP	OR51Q1	ENST00000300778	human	ensembl	74_37	+1	known	missense	c.677	p.N226T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51Q1	HGNC	ENSG00000167360				140	0	0	89	35	28.2258
OR51I2	0	genome.wustl.edu	37	11	5475026	5475026	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	5475026	5475026	T	G	SNP	OR51I2	ENST00000341449	human	ensembl	74_37	+1	known	missense	c.308	p.L103R	0.995	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I2	HGNC	ENSG00000187918				175	0	0	86	28	24.5614
OR5D13	0	genome.wustl.edu	37	11	55541717	55541717	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	55541717	55541717	T	G	SNP	OR5D13	ENST00000361760	human	ensembl	74_37	+1	known	silent	c.804	p.T268	0.090	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877				91	0	0	49	8	14.0351
OR5D16	0	genome.wustl.edu	37	11	55606614	55606614	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	55606614	55606614	C	T	SNP	OR5D16	ENST00000378396	human	ensembl	74_37	+1	known	silent	c.387	p.C129	0.963	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D16	HGNC	ENSG00000205029				148	0	0	92	28	23.3333
TRIM51	0	genome.wustl.edu	37	11	55658772	55658772	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	55658772	55658772	T	C	SNP	TRIM51	ENST00000449290	human	ensembl	74_37	+1	known	silent	c.1023	p.Y341	0.996	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM51	HGNC	ENSG00000124900				161	0	0	109	31	22.1429
OR5M11	0	genome.wustl.edu	37	11	56309940	56309940	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	56309940	56309940	T	G	SNP	OR5M11	ENST00000528616	human	ensembl	74_37	-1	known	missense	c.794	p.K265T	0.686	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M11	HGNC	ENSG00000255223				90	0	0	50	30	37.5
MIR130A	0	genome.wustl.edu	37	11	57408677	57408677	+	RNA	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	57408677	57408677	T	C	SNP	MIR130A	ENST00000385274	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	MIR130A	HGNC	ENSG00000208009				10	0	0	11	3	21.4286
OR1S2	0	genome.wustl.edu	37	11	57971212	57971212	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	57971212	57971212	A	C	SNP	OR1S2	ENST00000302592	human	ensembl	74_37	-1	known	missense	c.442	p.F148V	0.006	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1S2	HGNC	ENSG00000197887				184	0	0	161	27	14.3617
OR52E6	0	genome.wustl.edu	37	11	5862229	5862229	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	5862229	5862229	A	C	SNP	OR52E6	ENST00000379946	human	ensembl	74_37	-1	known	missense	c.911	p.I304S	0.973	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E6	HGNC	ENSG00000205409				96	0	0	50	31	38.2716
OR4D10	0	genome.wustl.edu	37	11	59244981	59244981	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	59244981	59244981	T	G	SNP	OR4D10	ENST00000530162	human	ensembl	74_37	+1	known	missense	c.79	p.L27V	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D10	HGNC	ENSG00000254466				122	0	0	129	9	6.52174
PATL1	0	genome.wustl.edu	37	11	59410351	59410351	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	59410351	59410351	A	G	SNP	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	splice_site	c.2049+2	e16+2	0.999	-	-	-	no_errors	PATL1	HGNC	ENSG00000166889				208	0	0	157	22	12.2905
MS4A7	0	genome.wustl.edu	37	11	60152695	60152695	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	60152695	60152695	T	C	SNP	MS4A7	ENST00000300184	human	ensembl	74_37	+1	known	silent	c.282	p.C94	0.999	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A7	HGNC	ENSG00000166927				178	0	0	123	18	12.766
OR56A4	0	genome.wustl.edu	37	11	6024227	6024227	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	6024227	6024227	A	T	SNP	OR56A4	ENST00000330728	human	ensembl	74_37	-1	known	missense	c.152	p.L51H	0.022	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR56A4	HGNC	ENSG00000183389				89	0	0	46	21	31.3433
AHNAK	0	genome.wustl.edu	37	11	62286461	62286461	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	62286461	62286461	A	C	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.15428	p.V5143G	1.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				60	0	0	49	8	14.0351
SLC22A9	0	genome.wustl.edu	37	11	63175638	63175638	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	63175638	63175638	T	C	SNP	SLC22A9	ENST00000279178	human	ensembl	74_37	+1	known	missense	c.1343	p.L448P	0.000	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A9	HGNC	ENSG00000149742				50	0	0	44	10	18.5185
SLC22A9	0	genome.wustl.edu	37	11	63177296	63177296	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	63177296	63177296	A	C	SNP	SLC22A9	ENST00000279178	human	ensembl	74_37	+1	known	missense	c.1624	p.K542Q	0.025	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A9	HGNC	ENSG00000149742				30	0	0	45	6	11.7647
RTN3	0	genome.wustl.edu	37	11	63487765	63487765	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	63487765	63487765	A	C	SNP	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	missense	c.1791	p.E597D	0.000	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318				152	0	0	101	33	24.6269
RELA	0	genome.wustl.edu	37	11	65425909	65425909	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	65425909	65425909	A	G	SNP	RELA	ENST00000406246	human	ensembl	74_37	-1	known	silent	c.726	p.A242	0.032	superfamily_Ig_E-set,smart_IPT,prints_NF_Rel_Dor	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELA	HGNC	ENSG00000173039				28	0	0	27	2	6.89655
CATSPER1	0	genome.wustl.edu	37	11	65792743	65792743	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	65792743	65792743	T	C	SNP	CATSPER1	ENST00000312106	human	ensembl	74_37	-1	known	missense	c.1108	p.I370V	0.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER1	HGNC	ENSG00000175294				77	0	0	49	16	24.6154
B3GNT1	0	genome.wustl.edu	37	11	66113626	66113626	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	66113626	66113626	T	G	SNP	B3GNT1	ENST00000311181	human	ensembl	74_37	-1	known	missense	c.1142	p.K381T	0.970	NULL	NULL	-	no_errors	B3GNT1	HGNC	ENSG00000174684				162	0	0	106	35	24.8227
CTSF	0	genome.wustl.edu	37	11	66333365	66333365	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	66333365	66333365	T	A	SNP	CTSF	ENST00000310325	human	ensembl	74_37	-1	known	missense	c.901	p.T301S	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSF	HGNC	ENSG00000174080				80	0	0	61	7	10.2941
ALDH3B1	0	genome.wustl.edu	37	11	67789236	67789236	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	67789236	67789236	T	G	SNP	ALDH3B1	ENST00000007633	human	ensembl	74_37	+1	known	missense	c.842	p.L281R	1.000	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3B1	HGNC	ENSG00000006534				196	0	0	183	19	9.40594
OR10A4	0	genome.wustl.edu	37	11	6898191	6898191	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	6898191	6898191	T	A	SNP	OR10A4	ENST00000379829	human	ensembl	74_37	+1	known	missense	c.313	p.F105I	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A4	HGNC	ENSG00000170782				135	0	0	92	30	24.5902
PPFIA1	0	genome.wustl.edu	37	11	70221146	70221146	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	70221146	70221146	T	G	SNP	PPFIA1	ENST00000253925	human	ensembl	74_37	+1	known	missense	c.3262	p.F1088V	1.000	pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA1	HGNC	ENSG00000131626				50	0	0	40	9	18.3673
CTTN	0	genome.wustl.edu	37	11	70279801	70279801	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	70279801	70279801	T	C	SNP	CTTN	ENST00000301843	human	ensembl	74_37	+1	known	missense	c.1493	p.V498A	0.997	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733				105	0	0	97	13	11.8182
NLRP14	0	genome.wustl.edu	37	11	7060994	7060994	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	7060994	7060994	A	C	SNP	NLRP14	ENST00000299481	human	ensembl	74_37	+1	known	missense	c.339	p.Q113H	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP14	HGNC	ENSG00000158077				136	0	0	96	38	28.3582
KRTAP5-9	0	genome.wustl.edu	37	11	71260091	71260091	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	71260091	71260091	T	G	SNP	KRTAP5-9	ENST00000528743	human	ensembl	74_37	+1	known	missense	c.388	p.C130G	0.999	NULL	NULL	-	no_errors	KRTAP5-9	HGNC	ENSG00000254997				266	0	0	218	60	21.5827
FOLR3	0	genome.wustl.edu	37	11	71850819	71850819	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	71850819	71850819	T	G	SNP	FOLR3	ENST00000456237	human	ensembl	74_37	+1	known	missense	c.808	p.F270V	0.938	NULL	pfam_Folate_rcpt-like	-	no_errors	FOLR3	HGNC	ENSG00000110203				46	0	0	50	10	16.6667
C2CD3	0	genome.wustl.edu	37	11	73785595	73785595	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	73785595	73785595	A	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.4654	p.L1552V	0.954	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014				55	0	0	44	4	8.33333
P4HA3	0	genome.wustl.edu	37	11	73996867	73996867	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	73996867	73996867	A	G	SNP	P4HA3	ENST00000331597	human	ensembl	74_37	-1	known	missense	c.1097	p.L366P	0.241	smart_Pro_4_hyd_alph	pfam_Pro_4_hyd_alph_N,pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HA3	HGNC	ENSG00000149380				158	0	0	152	38	20
PGM2L1	0	genome.wustl.edu	37	11	74058298	74058298	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	74058298	74058298	T	C	SNP	PGM2L1	ENST00000298198	human	ensembl	74_37	-1	known	silent	c.834	p.K278	0.993	pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-II,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_C,superfamily_A-D-PHexomutase_a/b/a-I/II/III	-	no_errors	PGM2L1	HGNC	ENSG00000165434				66	0	0	70	13	15.6627
PGM2L1	0	genome.wustl.edu	37	11	74085565	74085565	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	74085565	74085565	T	A	SNP	PGM2L1	ENST00000298198	human	ensembl	74_37	-1	known	silent	c.174	p.R58	0.951	superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-II,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_C,superfamily_A-D-PHexomutase_a/b/a-I/II/III	-	no_errors	PGM2L1	HGNC	ENSG00000165434				88	0	0	76	5	6.17284
SYT9	0	genome.wustl.edu	37	11	7439233	7439233	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	7439233	7439233	A	G	SNP	SYT9	ENST00000318881	human	ensembl	74_37	+1	known	missense	c.1211	p.K404R	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT9	HGNC	ENSG00000170743				77	0	0	58	21	26.5823
NEU3	0	genome.wustl.edu	37	11	74717517	74717517	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	74717517	74717517	A	G	SNP	NEU3	ENST00000294064	human	ensembl	74_37	+1	known	missense	c.1366	p.S456G	0.001	NULL	superfamily_Sialidases	-	no_errors	NEU3	HGNC	ENSG00000162139				163	0	0	119	10	7.75194
OLFML1	0	genome.wustl.edu	37	11	7509423	7509423	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	7509423	7509423	A	T	SNP	OLFML1	ENST00000329293	human	ensembl	74_37	+1	known	missense	c.195	p.K65N	0.998	NULL	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML1	HGNC	ENSG00000183801				64	0	0	62	9	12.6761
MYO7A	0	genome.wustl.edu	37	11	76917198	76917198	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	76917198	76917198	A	T	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.5693	p.K1898M	1.000	smart_Band_41_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474				28	0	0	17	3	15
CLNS1A	0	genome.wustl.edu	37	11	77336835	77336835	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	77336835	77336835	T	G	SNP	CLNS1A	ENST00000525428	human	ensembl	74_37	-1	known	missense	c.291	p.E97D	1.000	NULL	prints_ICln_channel	-	no_errors	CLNS1A	HGNC	ENSG00000074201				26	0	0	29	3	9.375
TENM4	0	genome.wustl.edu	37	11	78380755	78380755	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	78380755	78380755	A	G	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.6635	p.L2212P	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				105	0	0	94	29	23.5772
TENM4	0	genome.wustl.edu	37	11	78381295	78381295	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	78381295	78381295	A	C	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.6095	p.F2032C	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				49	0	0	26	8	23.5294
TENM4	0	genome.wustl.edu	37	11	78413446	78413446	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	78413446	78413446	A	C	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	silent	c.4212	p.V1404	0.998	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				131	0	0	107	14	11.5702
CCDC81	0	genome.wustl.edu	37	11	86111788	86111788	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	86111788	86111788	T	A	SNP	CCDC81	ENST00000445632	human	ensembl	74_37	+1	known	missense	c.826	p.L276M	0.001	NULL	superfamily_IHF-like_DNA-bd_dom	-	no_errors	CCDC81	HGNC	ENSG00000149201				123	0	0	160	13	7.51445
FAT3	0	genome.wustl.edu	37	11	92088050	92088050	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	92088050	92088050	T	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.2772	p.V924	0.021	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				140	0	0	125	35	21.875
PIWIL4	0	genome.wustl.edu	37	11	94308224	94308224	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	94308224	94308224	A	C	SNP	PIWIL4	ENST00000299001	human	ensembl	74_37	+1	known	missense	c.226	p.N76H	0.000	NULL	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL4	HGNC	ENSG00000134627				92	0	0	88	9	9.27835
IPO7	0	genome.wustl.edu	37	11	9431549	9431549	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	9431549	9431549	A	T	SNP	IPO7	ENST00000379719	human	ensembl	74_37	+1	known	missense	c.395	p.K132I	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,pfam_Cse1,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO7	HGNC	ENSG00000205339				107	0	0	76	12	13.6364
IPO7	0	genome.wustl.edu	37	11	9446534	9446534	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	9446534	9446534	A	T	SNP	IPO7	ENST00000379719	human	ensembl	74_37	+1	known	missense	c.1215	p.K405N	1.000	pfam_Cse1,superfamily_ARM-type_fold	pfam_Importin-beta_N,pfam_Cse1,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO7	HGNC	ENSG00000205339				85	0	0	54	16	22.8571
ZNF143	0	genome.wustl.edu	37	11	9522759	9522759	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	9522759	9522759	A	C	SNP	ZNF143	ENST00000396602	human	ensembl	74_37	+1	known	silent	c.1089	p.G363	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF143	HGNC	ENSG00000166478				143	0	0	123	8	6.10687
WNK1	0	genome.wustl.edu	37	12	1005569	1005569	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	1005569	1005569	A	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	missense	c.7410	p.K2470N	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237				156	0	0	114	28	19.7183
ARL1	0	genome.wustl.edu	37	12	101790343	101790343	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	101790343	101790343	T	C	SNP	ARL1	ENST00000261636	human	ensembl	74_37	-1	known	missense	c.349	p.R117G	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_SRP_receptor_beta_su,pfam_Gprotein_alpha_su,pfam_MIRO-like,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Rab_type,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_SRP_receptor_beta_su,pfam_Gprotein_alpha_su,pfam_MIRO-like,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL1	HGNC	ENSG00000120805				129	0	0	132	16	10.8108
GNPTAB	0	genome.wustl.edu	37	12	102174027	102174027	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	102174027	102174027	T	C	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	missense	c.674	p.Q225R	0.989	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670				92	0	0	87	10	10.3093
PARPBP	0	genome.wustl.edu	37	12	102572378	102572378	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	102572378	102572378	T	C	SNP	PARPBP	ENST00000358383	human	ensembl	74_37	+1	known	silent	c.1014	p.S338	0.345	NULL	superfamily_P-loop_NTPase	-	no_errors	PARPBP	HGNC	ENSG00000185480				47	0	0	38	9	19.1489
ASCL1	0	genome.wustl.edu	37	12	103352261	103352261	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	103352261	103352261	A	G	SNP	ASCL1	ENST00000266744	human	ensembl	74_37	+1	known	missense	c.239	p.K80R	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ASCL1	HGNC	ENSG00000139352				10	0	0	11	3	21.4286
ACACB	0	genome.wustl.edu	37	12	109577503	109577503	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	109577503	109577503	A	G	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.293	p.K98R	0.530	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				207	0	0	162	54	25
ACACB	0	genome.wustl.edu	37	12	109644623	109644623	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	109644623	109644623	A	T	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.3022	p.S1008C	0.994	pfam_AcCoA_COase_cen	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				142	0	0	113	31	21.5278
UBE3B	0	genome.wustl.edu	37	12	109959331	109959331	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	109959331	109959331	A	C	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.2339	p.K780T	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148				51	0	0	65	11	14.4737
MVK	0	genome.wustl.edu	37	12	110028611	110028611	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	110028611	110028611	A	C	SNP	MVK	ENST00000228510	human	ensembl	74_37	+1	known	missense	c.713	p.K238T	1.000	tigrfam_Mev_gal_kin	pfam_GHMP_kinase_N_dom,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	-	no_errors	MVK	HGNC	ENSG00000110921				89	0	0	63	4	5.97015
TAS2R50	0	genome.wustl.edu	37	12	11139032	11139032	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	11139032	11139032	T	C	SNP	TAS2R50	ENST00000506868	human	ensembl	74_37	-1	known	missense	c.428	p.H143R	0.001	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R50	HGNC	ENSG00000212126				233	0	0	100	60	37.5
OAS1	0	genome.wustl.edu	37	12	113346442	113346442	+	Silent	SNP	C	C	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	113346442	113346442	C	G	SNP	OAS1	ENST00000445409	human	ensembl	74_37	+1	known	silent	c.282	p.R94	0.041	pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS1	HGNC	ENSG00000089127				62	0	0	79	7	8.13953
C12orf49	0	genome.wustl.edu	37	12	117160952	117160952	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	117160952	117160952	A	C	SNP	C12orf49	ENST00000261318	human	ensembl	74_37	-1	known	missense	c.188	p.F63C	1.000	NULL	pfam_UPF0454	-	no_errors	C12orf49	HGNC	ENSG00000111412				70	0	0	80	8	9.09091
NOS1	0	genome.wustl.edu	37	12	117696841	117696841	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	117696841	117696841	T	C	SNP	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	missense	c.2462	p.E821G	1.000	pfam_Flavodoxin/NO_synth,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250				64	0	0	59	5	7.8125
WSB2	0	genome.wustl.edu	37	12	118476183	118476183	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	118476183	118476183	A	C	SNP	WSB2	ENST00000315436	human	ensembl	74_37	-1	known	missense	c.570	p.I190M	0.463	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SOCS_C,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WSB2	HGNC	ENSG00000176871				52	0	0	59	7	10.6061
CIT	0	genome.wustl.edu	37	12	120214531	120214531	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	120214531	120214531	A	C	SNP	CIT	ENST00000261833	human	ensembl	74_37	-1	known	missense	c.1781	p.L594R	0.950	pirsf_Citron_Rho-interacting_kinase	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pirsf_Citron_Rho-interacting_kinase,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CIT	HGNC	ENSG00000122966				110	0	0	104	7	6.30631
GCN1L1	0	genome.wustl.edu	37	12	120602204	120602204	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	120602204	120602204	A	C	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.1784	p.L595R	0.988	pfam_DUF3554,superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				204	0	0	143	48	25.1309
RSRC2	0	genome.wustl.edu	37	12	122990116	122990116	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	122990116	122990116	A	G	SNP	RSRC2	ENST00000331738	human	ensembl	74_37	-1	known	silent	c.1263	p.G421	0.963	NULL	NULL	-	no_errors	RSRC2	HGNC	ENSG00000111011				96	0	0	101	16	13.6752
DNAH10	0	genome.wustl.edu	37	12	124350506	124350506	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	124350506	124350506	T	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.6699	p.D2233E	0.991	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				81	0	0	81	6	6.89655
DNAH10	0	genome.wustl.edu	37	12	124359938	124359938	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	124359938	124359938	A	G	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.7745	p.D2582G	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				45	0	0	45	13	22.4138
DUSP16	0	genome.wustl.edu	37	12	12640054	12640054	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	12640054	12640054	A	C	SNP	DUSP16	ENST00000228862	human	ensembl	74_37	-1	known	missense	c.599	p.F200C	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP16	HGNC	ENSG00000111266				141	0	0	86	5	5.49451
GPR19	0	genome.wustl.edu	37	12	12814254	12814254	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	12814254	12814254	T	G	SNP	GPR19	ENST00000332427	human	ensembl	74_37	-1	known	missense	c.1129	p.I377L	0.912	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR19	HGNC	ENSG00000183150				133	0	0	82	9	9.89011
GPR19	0	genome.wustl.edu	37	12	12814276	12814276	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	12814276	12814276	T	G	SNP	GPR19	ENST00000332427	human	ensembl	74_37	-1	known	missense	c.1107	p.K369N	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR19	HGNC	ENSG00000183150				138	0	0	90	7	7.21649
ATF7IP	0	genome.wustl.edu	37	12	14649259	14649259	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	14649259	14649259	A	C	SNP	ATF7IP	ENST00000261168	human	ensembl	74_37	+1	known	silent	c.3375	p.R1125	0.882	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ATF7IP	HGNC	ENSG00000171681				48	0	0	47	5	9.61538
PLBD1	0	genome.wustl.edu	37	12	14706297	14706297	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	14706297	14706297	T	G	SNP	PLBD1	ENST00000240617	human	ensembl	74_37	-1	known	missense	c.165	p.Q55H	0.029	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD1	HGNC	ENSG00000121316				108	0	0	80	28	25.9259
STRAP	0	genome.wustl.edu	37	12	16055855	16055855	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	16055855	16055855	A	C	SNP	STRAP	ENST00000025399	human	ensembl	74_37	+1	known	missense	c.1035	p.E345D	0.992	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	STRAP	HGNC	ENSG00000023734				55	0	0	48	7	12.7273
ADIPOR2	0	genome.wustl.edu	37	12	1893087	1893087	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	1893087	1893087	T	G	SNP	ADIPOR2	ENST00000357103	human	ensembl	74_37	+1	known	missense	c.880	p.L294V	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	ADIPOR2	HGNC	ENSG00000006831				71	0	0	48	11	18.6441
PLEKHA5	0	genome.wustl.edu	37	12	19501386	19501386	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	19501386	19501386	A	C	SNP	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	missense	c.2643	p.E881D	1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				110	0	0	80	21	20.7921
RECQL	0	genome.wustl.edu	37	12	21628511	21628511	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	21628511	21628511	C	T	SNP	RECQL	ENST00000421138	human	ensembl	74_37	-1	known	silent	c.1107	p.V369	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700				52	0	0	71	8	10.1266
LINC00477	0	genome.wustl.edu	37	12	24736739	24736739	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	24736739	24736739	A	G	SNP	LINC00477	ENST00000483544	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.135	-	-	-	no_errors	LINC00477	HGNC	ENSG00000197503				56	0	0	42	23	35.3846
ITPR2	0	genome.wustl.edu	37	12	26640027	26640027	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	26640027	26640027	A	G	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.5528	p.L1843S	0.000	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104				142	0	0	109	28	20.438
ITFG2	0	genome.wustl.edu	37	12	2930009	2930009	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	2930009	2930009	T	A	SNP	ITFG2	ENST00000228799	human	ensembl	74_37	+1	known	silent	c.666	p.P222	0.000	superfamily_WD40_repeat_dom	pfam_FG-GAP,superfamily_WD40_repeat_dom	-	no_errors	ITFG2	HGNC	ENSG00000111203				67	0	0	26	9	25.7143
FGD4	0	genome.wustl.edu	37	12	32778593	32778593	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	32778593	32778593	T	C	SNP	FGD4	ENST00000427716	human	ensembl	74_37	+1	known	silent	c.1641	p.A547	0.946	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD4	HGNC	ENSG00000139132				74	0	0	71	13	15.4762
FGD4	0	genome.wustl.edu	37	12	32778598	32778598	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	32778598	32778598	T	C	SNP	FGD4	ENST00000427716	human	ensembl	74_37	+1	known	missense	c.1646	p.L549P	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD4	HGNC	ENSG00000139132				77	0	0	82	14	14.5833
CNTN1	0	genome.wustl.edu	37	12	41327555	41327555	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	41327555	41327555	A	C	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.860	p.E287A	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236				92	0	0	91	10	9.90099
CNTN1	0	genome.wustl.edu	37	12	41421690	41421690	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	41421690	41421690	A	C	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	silent	c.2742	p.S914	0.002	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236				57	0	0	57	28	32.9412
TWF1	0	genome.wustl.edu	37	12	44191514	44191514	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	44191514	44191514	C	T	SNP	TWF1	ENST00000325127	human	ensembl	74_37	-1	known	silent	c.708	p.Q236	0.993	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin	-	no_errors	TWF1	HGNC	ENSG00000151239				117	0	0	111	10	8.26446
KDM5A	0	genome.wustl.edu	37	12	461399	461399	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	461399	461399	T	C	SNP	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	missense	c.1121	p.K374R	1.000	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				80	0	0	69	13	15.8537
HDAC7	0	genome.wustl.edu	37	12	48183070	48183070	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	48183070	48183070	C	T	SNP	HDAC7	ENST00000380610	human	ensembl	74_37	-1	known	missense	c.2260	p.A754T	1.000	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC7	HGNC	ENSG00000061273				186	0	0	158	15	8.67052
OR10AD1	0	genome.wustl.edu	37	12	48596600	48596600	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	48596600	48596600	A	C	SNP	OR10AD1	ENST00000310248	human	ensembl	74_37	-1	known	missense	c.476	p.F159C	0.006	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10AD1	HGNC	ENSG00000172640				40	0	0	31	4	11.4286
OR10AD1	0	genome.wustl.edu	37	12	48597066	48597066	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	48597066	48597066	T	C	SNP	OR10AD1	ENST00000310248	human	ensembl	74_37	-1	known	missense	c.10	p.N4D	0.199	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10AD1	HGNC	ENSG00000172640				58	0	0	75	5	6.25
KMT2D	0	genome.wustl.edu	37	12	49444192	49444192	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	49444192	49444192	T	G	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.3179	p.K1060T	0.292	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				41	0	0	28	4	12.5
FMNL3	0	genome.wustl.edu	37	12	50050607	50050607	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	50050607	50050607	T	G	SNP	FMNL3	ENST00000293590	human	ensembl	74_37	-1	known	silent	c.790	p.R264	1.000	pfam_GTPase-bd,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL3	HGNC	ENSG00000161791				82	0	0	84	8	8.69565
RACGAP1	0	genome.wustl.edu	37	12	50388012	50388012	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	50388012	50388012	T	C	SNP	RACGAP1	ENST00000312377	human	ensembl	74_37	-1	known	missense	c.1241	p.D414G	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,superfamily_Regulat_G_prot_signal_superfam,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	RACGAP1	HGNC	ENSG00000161800				179	0	0	181	14	7.17949
KRT6A	0	genome.wustl.edu	37	12	52884661	52884661	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	52884661	52884661	A	G	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	missense	c.893	p.L298P	0.998	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420				95	0	0	98	9	8.41121
KRT8	0	genome.wustl.edu	37	12	53298699	53298699	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	53298699	53298699	G	A	SNP	KRT8	ENST00000293308	human	ensembl	74_37	-1	known	missense	c.67	p.R23C	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT8	HGNC	ENSG00000170421				26	0	0	22	3	12
AAAS	0	genome.wustl.edu	37	12	53702131	53702131	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	53702131	53702131	A	G	SNP	AAAS	ENST00000209873	human	ensembl	74_37	-1	known	missense	c.1184	p.L395P	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AAAS	HGNC	ENSG00000094914				118	0	0	69	37	34.9057
HOXC11	0	genome.wustl.edu	37	12	54369034	54369034	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	54369034	54369034	T	C	SNP	HOXC11	ENST00000546378	human	ensembl	74_37	+1	known	missense	c.752	p.F251S	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_DUF3528,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC11	HGNC	ENSG00000123388				70	0	0	84	11	11.5789
NCKAP1L	0	genome.wustl.edu	37	12	54902229	54902229	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	54902229	54902229	A	C	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	silent	c.420	p.S140	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338				251	0	0	266	30	10.1351
PDE1B	0	genome.wustl.edu	37	12	54970356	54970356	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	54970356	54970356	T	G	SNP	PDE1B	ENST00000243052	human	ensembl	74_37	+1	known	missense	c.1378	p.F460V	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1B	HGNC	ENSG00000123360				69	0	0	26	29	52.7273
OR9K2	0	genome.wustl.edu	37	12	55524397	55524397	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	55524397	55524397	T	G	SNP	OR9K2	ENST00000305377	human	ensembl	74_37	+1	known	missense	c.845	p.F282C	0.916	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9K2	HGNC	ENSG00000170605				183	0	0	140	51	26.7016
OR10A7	0	genome.wustl.edu	37	12	55615481	55615481	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	55615481	55615481	A	C	SNP	OR10A7	ENST00000326258	human	ensembl	74_37	+1	known	missense	c.673	p.I225L	0.418	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A7	HGNC	ENSG00000179919				88	0	0	65	18	21.6867
OR6C68	0	genome.wustl.edu	37	12	55886425	55886425	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	55886425	55886425	A	C	SNP	OR6C68	ENST00000379662	human	ensembl	74_37	+1	known	missense	c.279	p.K93N	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR6C68	HGNC	ENSG00000205327				135	0	0	101	32	24.0602
ENSG00000212383	0	genome.wustl.edu	37	12	57255274	57255274	+	RNA	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	57255274	57255274	T	C	SNP	ENSG00000212383	ENST00000391081	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.109	-	-	-	no_errors	SNORA48	RFAM	ENSG00000212383				52	0	0	41	9	18
ARHGAP9	0	genome.wustl.edu	37	12	57873165	57873165	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	57873165	57873165	T	C	SNP	ARHGAP9	ENST00000356411	human	ensembl	74_37	-1	known	missense	c.25	p.S9G	1.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP9	HGNC	ENSG00000123329				75	0	0	69	11	13.75
VWF	0	genome.wustl.edu	37	12	6103171	6103171	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	6103171	6103171	T	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.6455	p.K2152M	0.027	pirsf_VWF,pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				73	0	0	43	15	25.8621
VWF	0	genome.wustl.edu	37	12	6125799	6125799	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	6125799	6125799	C	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.5194	p.V1732M	1.000	pirsf_VWF,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				94	0	0	52	22	29.7297
VWF	0	genome.wustl.edu	37	12	6128379	6128379	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	6128379	6128379	T	C	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.4205	p.Q1402R	0.000	pirsf_VWF,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				123	0	0	77	24	23.7624
PPM1H	0	genome.wustl.edu	37	12	63113967	63113967	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	63113967	63113967	A	G	SNP	PPM1H	ENST00000228705	human	ensembl	74_37	-1	known	missense	c.1057	p.F353L	1.000	superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1H	HGNC	ENSG00000111110				100	0	0	117	17	12.6866
RPS11P6	0	genome.wustl.edu	37	12	64790385	64790385	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	64790385	64790385	A	C	SNP	RPS11P6	ENST00000482431	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.828	-	-	-	no_errors	RPS11P6	HGNC	ENSG00000243024				12	0	0	13	3	18.75
RAB21	0	genome.wustl.edu	37	12	72167766	72167766	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	72167766	72167766	A	G	SNP	RAB21	ENST00000261263	human	ensembl	74_37	+1	known	missense	c.355	p.K119E	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB21	HGNC	ENSG00000080371				49	0	0	65	4	5.7971
CD163L1	0	genome.wustl.edu	37	12	7531781	7531781	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	7531781	7531781	T	G	SNP	CD163L1	ENST00000313599	human	ensembl	74_37	-1	known	missense	c.2164	p.N722H	0.010	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD163L1	HGNC	ENSG00000177675				111	0	0	101	12	10.6195
KCNC2	0	genome.wustl.edu	37	12	75601557	75601557	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	75601557	75601557	C	T	SNP	KCNC2	ENST00000549446	human	ensembl	74_37	-1	known	silent	c.207	p.P69	0.002	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC2	HGNC	ENSG00000166006				12	0	0	15	9	37.5
CLEC4C	0	genome.wustl.edu	37	12	7894101	7894101	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	7894101	7894101	T	G	SNP	CLEC4C	ENST00000360345	human	ensembl	74_37	-1	known	missense	c.151	p.T51P	0.047	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC4C	HGNC	ENSG00000198178				108	0	0	59	18	23.3766
PZP	0	genome.wustl.edu	37	12	9318719	9318719	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	9318719	9318719	A	C	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.2187	p.S729R	0.002	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838				101	0	0	62	34	35.4167
EEA1	0	genome.wustl.edu	37	12	93226309	93226309	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	93226309	93226309	T	G	SNP	EEA1	ENST00000322349	human	ensembl	74_37	-1	known	missense	c.1233	p.Q411H	0.999	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	EEA1	HGNC	ENSG00000102189				140	0	0	98	72	42.3529
PLXNC1	0	genome.wustl.edu	37	12	94692436	94692436	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	94692436	94692436	T	G	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.4103	p.L1368R	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				57	0	0	37	15	28.8462
APAF1	0	genome.wustl.edu	37	12	99042569	99042569	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	12	99042569	99042569	T	G	SNP	APAF1	ENST00000551964	human	ensembl	74_37	+1	known	missense	c.304	p.S102A	0.567	pirsf_Apoptotic_pept-activating_1	pfam_WD40_repeat,pfam_NB-ARC,pfam_CARD,superfamily_WD40_repeat_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pirsf_Apoptotic_pept-activating_1,pfscan_CARD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Disease_R,prints_G-protein_beta_WD-40_rep	-	no_errors	APAF1	HGNC	ENSG00000120868				161	0	0	174	38	17.9245
MYO16	0	genome.wustl.edu	37	13	109704747	109704747	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	109704747	109704747	A	C	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.2906	p.K969T	0.068	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515				111	0	0	60	27	31.0345
MYO16	0	genome.wustl.edu	37	13	109704765	109704765	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	109704765	109704765	A	C	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.2924	p.K975T	0.998	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515				99	0	0	70	17	19.5402
ATP11A	0	genome.wustl.edu	37	13	113487306	113487306	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	113487306	113487306	G	A	SNP	ATP11A	ENST00000375630	human	ensembl	74_37	+1	known	missense	c.1528	p.D510N	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11A	HGNC	ENSG00000068650				201	0	0	146	45	23.5602
CRYL1	0	genome.wustl.edu	37	13	20978777	20978777	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	20978777	20978777	G	A	SNP	CRYL1	ENST00000298248	human	ensembl	74_37	-1	known	silent	c.843	p.N281	0.767	NULL	pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	-	no_errors	CRYL1	HGNC	ENSG00000165475				111	0	0	79	22	21.7822
XPO4	0	genome.wustl.edu	37	13	21383284	21383284	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	21383284	21383284	T	G	SNP	XPO4	ENST00000255305	human	ensembl	74_37	-1	known	missense	c.1431	p.Q477H	0.993	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	XPO4	HGNC	ENSG00000132953				137	0	0	107	15	12.2951
SACS	0	genome.wustl.edu	37	13	23907309	23907309	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	23907309	23907309	A	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.10706	p.L3569R	0.667	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				42	0	0	27	4	12.9032
SACS	0	genome.wustl.edu	37	13	23909096	23909096	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	23909096	23909096	A	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.8919	p.D2973E	0.122	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				113	0	0	105	27	20.4545
SACS	0	genome.wustl.edu	37	13	23910752	23910752	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	23910752	23910752	A	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.7263	p.F2421L	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				49	0	0	30	9	23.0769
TPTE2P6	0	genome.wustl.edu	37	13	25171578	25171578	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	25171578	25171578	A	C	SNP	TPTE2P6	ENST00000440905	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.193	-	-	-	no_errors	TPTE2P6	HGNC	ENSG00000205822				59	0	0	31	14	31.1111
MTUS2	0	genome.wustl.edu	37	13	29600662	29600662	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	29600662	29600662	T	C	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	silent	c.1857	p.P619	0.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938				43	0	0	33	10	23.2558
SUPT20H	0	genome.wustl.edu	37	13	37607715	37607715	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	37607715	37607715	A	C	SNP	SUPT20H	ENST00000350612	human	ensembl	74_37	-1	known	missense	c.578	p.L193R	0.997	pfam_Spt20	pfam_Spt20	-	no_errors	SUPT20H	HGNC	ENSG00000102710				115	0	0	115	10	8
FREM2	0	genome.wustl.edu	37	13	39265757	39265757	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	39265757	39265757	A	C	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.4276	p.S1426R	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893				157	0	0	95	50	34.4828
VWA8	0	genome.wustl.edu	37	13	42144716	42144716	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	42144716	42144716	T	G	SNP	VWA8	ENST00000379310	human	ensembl	74_37	-1	known	missense	c.5497	p.N1833H	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_ATPase_dyneun-rel_AAA,pfam_VWF_A,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA8	HGNC	ENSG00000102763				153	0	0	143	25	14.881
VWA8	0	genome.wustl.edu	37	13	42144783	42144783	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	42144783	42144783	T	G	SNP	VWA8	ENST00000379310	human	ensembl	74_37	-1	known	missense	c.5430	p.E1810D	0.995	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_ATPase_dyneun-rel_AAA,pfam_VWF_A,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA8	HGNC	ENSG00000102763				91	0	0	86	15	14.8515
FNDC3A	0	genome.wustl.edu	37	13	49748662	49748662	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	49748662	49748662	T	G	SNP	FNDC3A	ENST00000492622	human	ensembl	74_37	+1	known	missense	c.1322	p.F441C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3A	HGNC	ENSG00000102531				35	0	0	48	6	11.1111
PCDH8	0	genome.wustl.edu	37	13	53421176	53421176	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	53421176	53421176	T	C	SNP	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	missense	c.1396	p.T466A	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099				24	0	0	16	3	15.7895
DIAPH3	0	genome.wustl.edu	37	13	60544997	60544997	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	60544997	60544997	T	G	SNP	DIAPH3	ENST00000400324	human	ensembl	74_37	-1	known	missense	c.1948	p.N650H	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH3	HGNC	ENSG00000139734				66	0	0	51	5	8.92857
PCDH9	0	genome.wustl.edu	37	13	67801672	67801672	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	67801672	67801672	T	C	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.901	p.R301G	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226				126	0	0	85	35	29.1667
PIBF1	0	genome.wustl.edu	37	13	73372083	73372083	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	73372083	73372083	A	C	SNP	PIBF1	ENST00000326291	human	ensembl	74_37	+1	known	missense	c.591	p.E197D	0.835	NULL	superfamily_t-SNARE	-	no_errors	PIBF1	HGNC	ENSG00000083535				163	0	0	116	16	12.1212
PIBF1	0	genome.wustl.edu	37	13	73396078	73396078	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	73396078	73396078	A	G	SNP	PIBF1	ENST00000326291	human	ensembl	74_37	+1	known	missense	c.764	p.Q255R	1.000	NULL	superfamily_t-SNARE	-	no_errors	PIBF1	HGNC	ENSG00000083535				59	0	0	64	21	24.7059
MYCBP2	0	genome.wustl.edu	37	13	77635873	77635873	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	77635873	77635873	T	G	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.12827	p.N4276T	0.997	NULL	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				57	0	0	36	9	20
EDNRB	0	genome.wustl.edu	37	13	78493594	78493594	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	78493594	78493594	A	C	SNP	EDNRB	ENST00000377211	human	ensembl	74_37	-1	putative	missense	c.157	p.F53V	0.001	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ETB_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn,prints_Bombsn_rcpt	-	no_errors	EDNRB	HGNC	ENSG00000136160				56	0	0	42	13	23.6364
DOCK9	0	genome.wustl.edu	37	13	99452705	99452705	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	99452705	99452705	T	G	SNP	DOCK9	ENST00000339416	human	ensembl	74_37	-1	known	missense	c.5756	p.K1919T	1.000	pfam_DOCK_C	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK9	HGNC	ENSG00000088387				53	0	0	33	4	10.8108
AHNAK2	0	genome.wustl.edu	37	14	105415198	105415198	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	105415198	105415198	T	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.6590	p.K2197M	0.001	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				334	0	0	141	30	17.5439
OR4K5	0	genome.wustl.edu	37	14	20389223	20389223	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	20389223	20389223	T	C	SNP	OR4K5	ENST00000315915	human	ensembl	74_37	+1	known	missense	c.458	p.L153S	0.176	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K5	HGNC	ENSG00000176281				328	0	0	213	71	25
RNASE10	0	genome.wustl.edu	37	14	20979222	20979222	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	20979222	20979222	A	C	SNP	RNASE10	ENST00000328444	human	ensembl	74_37	+1	known	missense	c.592	p.K198Q	0.004	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE10	HGNC	ENSG00000182545				49	0	0	52	7	11.8644
MYH6	0	genome.wustl.edu	37	14	23853762	23853762	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	23853762	23853762	T	G	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	missense	c.5454	p.E1818D	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				155	0	0	88	47	34.8148
RNF31	0	genome.wustl.edu	37	14	24627108	24627108	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	24627108	24627108	A	T	SNP	RNF31	ENST00000324103	human	ensembl	74_37	+1	known	missense	c.2729	p.K910I	1.000	smart_Znf_C6HC	pfam_PUB_domain,pfam_Znf_C6HC,superfamily_UBA-like,superfamily_DEATH-like_dom,superfamily_Znf_FYVE_PHD,smart_Znf_RanBP2,smart_Znf_C6HC,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RanBP2	-	no_errors	RNF31	HGNC	ENSG00000092098				54	0	0	43	13	23.2143
TSSK4	0	genome.wustl.edu	37	14	24675723	24675723	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	24675723	24675723	A	C	SNP	TSSK4	ENST00000339917	human	ensembl	74_37	+1	known	missense	c.234	p.K78N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TSSK4	HGNC	ENSG00000139908				103	0	0	76	14	15.5556
NYNRIN	0	genome.wustl.edu	37	14	24878881	24878881	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	24878881	24878881	T	G	SNP	NYNRIN	ENST00000382554	human	ensembl	74_37	+1	known	silent	c.1881	p.A627	0.928	NULL	pfam_RNase_Zc3h12,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	NYNRIN	HGNC	ENSG00000205978				15	0	0	8	2	20
HEATR5A	0	genome.wustl.edu	37	14	31771644	31771644	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	31771644	31771644	T	A	SNP	HEATR5A	ENST00000389961	human	ensembl	74_37	-1	known	missense	c.5303	p.Q1768L	0.960	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493				10	0	0	17	4	19.0476
ARHGAP5	0	genome.wustl.edu	37	14	32560921	32560921	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	32560921	32560921	T	C	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1046	p.L349P	1.000	NULL	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				120	0	0	104	20	16.129
NPAS3	0	genome.wustl.edu	37	14	34204467	34204467	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	34204467	34204467	C	T	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	missense	c.781	p.R261C	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322				90	0	0	65	7	9.72222
NPAS3	0	genome.wustl.edu	37	14	34269204	34269204	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	34269204	34269204	A	G	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	missense	c.1691	p.E564G	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322				40	0	0	22	12	35.2941
ENSG00000258938	0	genome.wustl.edu	37	14	36289054	36289054	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	36289054	36289054	A	C	SNP	ENSG00000258938	ENST00000555918	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-317N8.5	Clone_based_vega_gene	ENSG00000258938				39	0	0	37	17	31.4815
MDGA2	0	genome.wustl.edu	37	14	47426820	47426820	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	47426820	47426820	A	C	SNP	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	missense	c.1846	p.L616V	0.975	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781				86	0	0	63	31	32.9787
NEMF	0	genome.wustl.edu	37	14	50253494	50253494	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	50253494	50253494	A	C	SNP	NEMF	ENST00000554275	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	NEMF	HGNC	ENSG00000165525				55	0	0	32	5	13.5135
ATP5S	0	genome.wustl.edu	37	14	50790684	50790684	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	50790684	50790684	A	C	SNP	ATP5S	ENST00000311459	human	ensembl	74_37	+1	known	missense	c.383	p.K128T	1.000	NULL	NULL	-	no_errors	ATP5S	HGNC	ENSG00000125375				82	0	0	62	22	26.1905
MAP4K5	0	genome.wustl.edu	37	14	50906792	50906792	+	Splice_Site	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	50906792	50906792	C	T	SNP	MAP4K5	ENST00000013125	human	ensembl	74_37	-1	known	splice_site	c.1645-1	e22-1	1.000	-	-	-	no_errors	MAP4K5	HGNC	ENSG00000012983				23	0	0	18	5	21.7391
TXNDC16	0	genome.wustl.edu	37	14	52981657	52981657	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	52981657	52981657	C	T	SNP	TXNDC16	ENST00000281741	human	ensembl	74_37	-1	known	silent	c.546	p.V182	0.995	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC16	HGNC	ENSG00000087301				147	0	0	101	40	28.3688
JKAMP	0	genome.wustl.edu	37	14	59965516	59965516	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	59965516	59965516	A	C	SNP	JKAMP	ENST00000356057	human	ensembl	74_37	+1	known	missense	c.554	p.K185T	1.000	pfam_DUF766	pfam_DUF766	-	no_errors	JKAMP	HGNC	ENSG00000050130				27	0	0	10	9	47.3684
ESR2	0	genome.wustl.edu	37	14	64716368	64716368	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	64716368	64716368	A	G	SNP	ESR2	ENST00000341099	human	ensembl	74_37	-1	known	missense	c.1121	p.L374P	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Estrogen_rcpt_beta_N,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR2	HGNC	ENSG00000140009				116	0	0	62	4	6.06061
SPTB	0	genome.wustl.edu	37	14	65252275	65252275	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	65252275	65252275	A	C	SNP	SPTB	ENST00000389722	human	ensembl	74_37	-1	known	missense	c.3835	p.F1279V	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182				31	0	0	8	8	50
SLC8A3	0	genome.wustl.edu	37	14	70515511	70515511	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	70515511	70515511	A	C	SNP	SLC8A3	ENST00000381269	human	ensembl	74_37	-1	known	missense	c.2380	p.F794V	1.000	pfam_NaCa_Exmemb,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A3	HGNC	ENSG00000100678				37	0	0	17	6	26.087
ADAM21P1	0	genome.wustl.edu	37	14	70712504	70712504	+	RNA	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	70712504	70712504	T	C	SNP	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.965	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812				71	0	0	32	17	34.6939
SIPA1L1	0	genome.wustl.edu	37	14	72117215	72117215	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	72117215	72117215	T	G	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.1982	p.L661R	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				59	0	0	56	9	13.8462
YLPM1	0	genome.wustl.edu	37	14	75283360	75283360	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	75283360	75283360	A	G	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	silent	c.5652	p.K1884	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				31	0	0	26	3	10.3448
SLIRP	0	genome.wustl.edu	37	14	78183895	78183895	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	78183895	78183895	A	G	SNP	SLIRP	ENST00000557342	human	ensembl	74_37	+1	known	silent	c.321	p.K107	0.995	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SLIRP	HGNC	ENSG00000119705				72	0	0	37	11	22.9167
ATG2B	0	genome.wustl.edu	37	14	96783531	96783531	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	14	96783531	96783531	A	C	SNP	ATG2B	ENST00000359933	human	ensembl	74_37	-1	known	missense	c.3161	p.V1054G	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739				98	0	0	53	21	28.3784
DNM1P46	0	genome.wustl.edu	37	15	100339966	100339966	+	RNA	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	100339966	100339966	G	T	SNP	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397				39	0	0	27	5	15.625
LRRK1	0	genome.wustl.edu	37	15	101609038	101609038	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	101609038	101609038	T	A	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	silent	c.6033	p.T2011	0.014	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237				65	0	0	34	15	30.6122
ENSG00000259480	0	genome.wustl.edu	37	15	23131919	23131919	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	23131919	23131919	T	G	SNP	ENSG00000259480	ENST00000560053	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-26F2.1	Clone_based_vega_gene	ENSG00000259480				38	0	0	20	14	41.1765
SNHG14	0	genome.wustl.edu	37	15	25470187	25470187	+	RNA	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	25470187	25470187	G	A	SNP	SNHG14	ENST00000453082	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				28	0	0	14	4	22.2222
SNHG14	0	genome.wustl.edu	37	15	25489098	25489098	+	RNA	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	25489098	25489098	G	T	SNP	SNHG14	ENST00000453082	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				8	0	0	2	3	60
HERC2	0	genome.wustl.edu	37	15	28478297	28478297	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	28478297	28478297	T	C	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.4670	p.K1557R	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				72	0	0	39	8	17.0213
GOLGA6L7P	0	genome.wustl.edu	37	15	29091060	29091060	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	29091060	29091060	T	G	SNP	GOLGA6L7P	ENST00000569815	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	GOLGA6L7P	HGNC	ENSG00000261649				12	0	0	9	3	25
TRPM1	0	genome.wustl.edu	37	15	31330353	31330353	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	31330353	31330353	A	C	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	missense	c.2384	p.L795R	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160				31	0	0	26	4	13.3333
BUB1B	0	genome.wustl.edu	37	15	40498573	40498573	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	40498573	40498573	A	C	SNP	BUB1B	ENST00000412359	human	ensembl	74_37	+1	known	missense	c.1965	p.E655D	0.996	NULL	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I	-	no_errors	BUB1B	HGNC	ENSG00000156970				89	0	0	52	14	21.2121
RPUSD2	0	genome.wustl.edu	37	15	40866189	40866189	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	40866189	40866189	A	G	SNP	RPUSD2	ENST00000315616	human	ensembl	74_37	+1	known	missense	c.1367	p.E456G	0.000	superfamily_PsdUridine_synth_cat_dom	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_RluC/D	-	no_errors	RPUSD2	HGNC	ENSG00000166133				116	0	0	102	17	14.2857
DNAJC17	0	genome.wustl.edu	37	15	41066632	41066632	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	41066632	41066632	A	G	SNP	DNAJC17	ENST00000220496	human	ensembl	74_37	-1	known	silent	c.603	p.Y201	1.000	pfam_RRM_dom	pfam_DnaJ_domain,pfam_RRM_dom,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC17	HGNC	ENSG00000104129				178	0	0	120	12	9.09091
MGA	0	genome.wustl.edu	37	15	42053967	42053967	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	42053967	42053967	C	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	nonsense	c.7429	p.Q2477*	1.000	superfamily_bHLH_dom,smart_bHLH_dom	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				12	0	0	7	3	30
PLA2G4E	0	genome.wustl.edu	37	15	42281732	42281732	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	42281732	42281732	G	T	SNP	PLA2G4E	ENST00000413860	human	ensembl	74_37	-1	known	missense	c.1517	p.P506H	1.000	pfam_LysoPLipase_cat_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4E	HGNC	ENSG00000188089				24	0	0	19	5	20.8333
TP53BP1	0	genome.wustl.edu	37	15	43748755	43748755	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	43748755	43748755	A	T	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	missense	c.2051	p.L684H	0.055	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				166	0	0	136	10	6.84932
DUOX1	0	genome.wustl.edu	37	15	45448048	45448048	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	45448048	45448048	T	G	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	missense	c.3623	p.F1208C	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857				157	0	0	96	41	29.927
SQRDL	0	genome.wustl.edu	37	15	45954208	45954208	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	45954208	45954208	C	T	SNP	SQRDL	ENST00000260324	human	ensembl	74_37	+1	known	missense	c.290	p.S97F	0.592	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	SQRDL	HGNC	ENSG00000137767				57	0	0	31	8	20.5128
SEMA6D	0	genome.wustl.edu	37	15	48056380	48056380	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	48056380	48056380	T	G	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	silent	c.975	p.G325	0.204	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				106	0	0	93	26	21.8487
SLC27A2	0	genome.wustl.edu	37	15	50519317	50519317	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	50519317	50519317	T	A	SNP	SLC27A2	ENST00000267842	human	ensembl	74_37	+1	known	missense	c.1399	p.L467I	0.972	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A2	HGNC	ENSG00000140284				62	0	0	41	13	24.0741
HDC	0	genome.wustl.edu	37	15	50534630	50534630	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	50534630	50534630	T	G	SNP	HDC	ENST00000267845	human	ensembl	74_37	-1	known	missense	c.1816	p.N606H	0.960	NULL	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	HDC	HGNC	ENSG00000140287				296	0	0	256	14	5.18519
HDC	0	genome.wustl.edu	37	15	50546770	50546770	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	50546770	50546770	T	C	SNP	HDC	ENST00000267845	human	ensembl	74_37	-1	known	missense	c.533	p.E178G	1.000	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	HDC	HGNC	ENSG00000140287				75	0	0	47	14	22.9508
CYP19A1	0	genome.wustl.edu	37	15	51507411	51507411	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	51507411	51507411	T	C	SNP	CYP19A1	ENST00000260433	human	ensembl	74_37	-1	known	missense	c.877	p.R293G	0.003	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP19A1	HGNC	ENSG00000137869				93	0	0	67	9	11.8421
DMXL2	0	genome.wustl.edu	37	15	51772992	51772992	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	51772992	51772992	T	C	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	missense	c.6311	p.K2104R	0.004	NULL	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093				124	0	0	115	15	11.5385
DMXL2	0	genome.wustl.edu	37	15	51783905	51783905	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	51783905	51783905	T	G	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	missense	c.4823	p.E1608A	1.000	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093				104	0	0	88	9	9.27835
MYO5A	0	genome.wustl.edu	37	15	52725446	52725446	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	52725446	52725446	A	G	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.64	p.W22R	0.995	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				86	0	0	67	11	14.1026
UNC13C	0	genome.wustl.edu	37	15	54305506	54305506	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	54305506	54305506	A	C	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	missense	c.406	p.S136R	0.737	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766				58	0	0	39	14	26.4151
PIGB	0	genome.wustl.edu	37	15	55612587	55612587	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	55612587	55612587	T	G	SNP	PIGB	ENST00000164305	human	ensembl	74_37	+1	known	missense	c.278	p.V93G	1.000	pfam_GPI_mannosylTrfase	pfam_GPI_mannosylTrfase	-	no_errors	PIGB	HGNC	ENSG00000069943				61	0	0	34	16	32
TEX9	0	genome.wustl.edu	37	15	56686444	56686444	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	56686444	56686444	A	C	SNP	TEX9	ENST00000352903	human	ensembl	74_37	+1	known	missense	c.653	p.K218T	1.000	NULL	NULL	-	no_errors	TEX9	HGNC	ENSG00000151575				87	0	0	101	6	5.60748
ZNF280D	0	genome.wustl.edu	37	15	56981564	56981564	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	56981564	56981564	A	C	SNP	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	missense	c.604	p.S202A	0.004	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280D	HGNC	ENSG00000137871				38	0	0	38	12	24
RNF111	0	genome.wustl.edu	37	15	59373169	59373169	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	59373169	59373169	T	C	SNP	RNF111	ENST00000434298	human	ensembl	74_37	+1	known	silent	c.1983	p.A661	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450				199	0	0	94	33	25.9843
MYO1E	0	genome.wustl.edu	37	15	59500962	59500962	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	59500962	59500962	T	C	SNP	MYO1E	ENST00000288235	human	ensembl	74_37	-1	known	missense	c.1448	p.Q483R	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1E	HGNC	ENSG00000157483				155	0	0	105	7	6.25
MYO1E	0	genome.wustl.edu	37	15	59553637	59553637	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	59553637	59553637	A	C	SNP	MYO1E	ENST00000288235	human	ensembl	74_37	-1	known	missense	c.219	p.I73M	0.994	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1E	HGNC	ENSG00000157483				104	0	0	85	26	23.4234
USP3	0	genome.wustl.edu	37	15	63882994	63882994	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	63882994	63882994	A	G	SNP	USP3	ENST00000380324	human	ensembl	74_37	+1	known	missense	c.1532	p.H511R	1.000	pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP3	HGNC	ENSG00000140455				145	0	0	106	32	23.1884
LARP6	0	genome.wustl.edu	37	15	71124941	71124941	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	71124941	71124941	T	C	SNP	LARP6	ENST00000299213	human	ensembl	74_37	-1	known	missense	c.926	p.E309G	0.897	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd,prints_Lupus_La	-	no_errors	LARP6	HGNC	ENSG00000166173				160	1	0.621118	106	33	23.741
SEMA7A	0	genome.wustl.edu	37	15	74704005	74704005	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	74704005	74704005	A	G	SNP	SEMA7A	ENST00000261918	human	ensembl	74_37	-1	known	missense	c.1469	p.L490P	1.000	superfamily_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA7A	HGNC	ENSG00000138623				82	0	0	49	6	10.9091
PTPN9	0	genome.wustl.edu	37	15	75798030	75798030	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	75798030	75798030	A	T	SNP	PTPN9	ENST00000306726	human	ensembl	74_37	-1	known	silent	c.954	p.T318	0.890	smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_CRAL-TRIO_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_CRAL-bd_toc_tran	-	no_errors	PTPN9	HGNC	ENSG00000169410				97	0	0	74	21	22.1053
C15orf27	0	genome.wustl.edu	37	15	76449088	76449088	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	76449088	76449088	A	C	SNP	C15orf27	ENST00000388942	human	ensembl	74_37	+1	known	missense	c.371	p.K124T	1.000	NULL	NULL	-	no_errors	C15orf27	HGNC	ENSG00000169758				79	0	0	82	9	9.89011
SCAPER	0	genome.wustl.edu	37	15	76673782	76673782	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	76673782	76673782	T	C	SNP	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	silent	c.3642	p.Q1214	0.982	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386				32	0	0	19	4	17.3913
ACSBG1	0	genome.wustl.edu	37	15	78486286	78486286	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	78486286	78486286	G	A	SNP	ACSBG1	ENST00000258873	human	ensembl	74_37	-1	known	missense	c.530	p.T177I	0.902	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSBG1	HGNC	ENSG00000103740				57	0	0	28	6	17.6471
RASGRF1	0	genome.wustl.edu	37	15	79350698	79350698	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	79350698	79350698	T	G	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	missense	c.509	p.E170A	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335				107	0	0	83	7	7.77778
C15orf26	0	genome.wustl.edu	37	15	81427654	81427654	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	81427654	81427654	T	G	SNP	C15orf26	ENST00000286732	human	ensembl	74_37	+1	known	missense	c.113	p.L38R	0.991	NULL	NULL	-	no_errors	C15orf26	HGNC	ENSG00000156206				69	0	0	62	10	13.8889
FSD2	0	genome.wustl.edu	37	15	83447586	83447586	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	83447586	83447586	T	G	SNP	FSD2	ENST00000334574	human	ensembl	74_37	-1	known	missense	c.1043	p.E348A	0.989	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,prints_Butyrophylin	-	no_errors	FSD2	HGNC	ENSG00000186628				36	0	0	29	14	32.5581
ZNF592	0	genome.wustl.edu	37	15	85326908	85326908	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	85326908	85326908	C	T	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	silent	c.1002	p.S334	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716				158	1	0.628931	95	24	20.1681
ALPK3	0	genome.wustl.edu	37	15	85383097	85383097	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	85383097	85383097	T	G	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.1193	p.I398S	0.966	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				94	0	0	47	16	25.3968
ALPK3	0	genome.wustl.edu	37	15	85411511	85411511	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	85411511	85411511	A	G	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.5548	p.K1850E	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				81	0	0	51	20	28.169
PDE8A	0	genome.wustl.edu	37	15	85656658	85656658	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	85656658	85656658	A	T	SNP	PDE8A	ENST00000310298	human	ensembl	74_37	+1	known	missense	c.1165	p.I389F	0.978	NULL	pfam_PDEase_catalytic_dom,pfam_Sig_transdc_resp-reg_receiver,pfam_PAS_fold,pfam_PAS_4,superfamily_PAS,superfamily_CheY-like_superfamily,smart_HD/PDEase_dom,pfscan_PAS,prints_PDEase,tigrfam_PAS	-	no_errors	PDE8A	HGNC	ENSG00000073417				146	0	0	94	18	16.0714
DET1	0	genome.wustl.edu	37	15	89074106	89074106	+	Silent	SNP	C	C	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	89074106	89074106	C	G	SNP	DET1	ENST00000444300	human	ensembl	74_37	-1	known	silent	c.864	p.R288	0.895	pfam_De-etiolated_protein_1_Det1	pfam_De-etiolated_protein_1_Det1	-	no_errors	DET1	HGNC	ENSG00000140543				54	0	0	39	20	33.8983
PLIN1	0	genome.wustl.edu	37	15	90210256	90210256	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	90210256	90210256	A	G	SNP	PLIN1	ENST00000300055	human	ensembl	74_37	-1	known	missense	c.1120	p.S374P	0.003	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN1	HGNC	ENSG00000166819				63	0	0	40	8	16.6667
IQGAP1	0	genome.wustl.edu	37	15	91009655	91009655	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	91009655	91009655	A	C	SNP	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	missense	c.2022	p.K674N	0.981	superfamily_P-loop_NTPase	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575				59	0	0	51	6	10.5263
BLM	0	genome.wustl.edu	37	15	91358410	91358410	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	91358410	91358410	T	C	SNP	BLM	ENST00000355112	human	ensembl	74_37	+1	known	silent	c.4155	p.T1385	0.001	NULL	pfam_RQC_domain,pfam_BDHCT,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_HRDC-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	BLM	HGNC	ENSG00000197299				107	0	0	68	32	32
C15orf32	0	genome.wustl.edu	37	15	93015408	93015408	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	93015408	93015408	A	G	SNP	C15orf32	ENST00000333334	human	ensembl	74_37	+1	known	silent	c.30	p.S10	0.000	NULL	NULL	-	no_errors	C15orf32	HGNC	ENSG00000183643				66	0	0	34	16	32
SPATA8	0	genome.wustl.edu	37	15	97326897	97326897	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	97326897	97326897	T	C	SNP	SPATA8	ENST00000328504	human	ensembl	74_37	+1	known	silent	c.12	p.A4	0.000	NULL	NULL	-	no_errors	SPATA8	HGNC	ENSG00000185594				92	0	0	45	14	23.7288
IGF1R	0	genome.wustl.edu	37	15	99192862	99192862	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	15	99192862	99192862	T	A	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	missense	c.52	p.F18I	0.998	pirsf_Tyr_kinase_insulin-like_rcpt	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				79	0	0	45	16	26.2295
GRIN2A	0	genome.wustl.edu	37	16	10274067	10274067	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	10274067	10274067	T	G	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	missense	c.202	p.N68H	1.000	superfamily_Peripla_BP_I	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454				152	0	0	107	7	6.14035
CLEC16A	0	genome.wustl.edu	37	16	11217681	11217681	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	11217681	11217681	A	C	SNP	CLEC16A	ENST00000409790	human	ensembl	74_37	+1	known	missense	c.2351	p.K784T	1.000	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532				100	0	0	65	12	15.5844
TPSB2	0	genome.wustl.edu	37	16	1278582	1278582	+	RNA	SNP	G	G	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	1278582	1278582	G	C	SNP	TPSB2	ENST00000606293	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPSB2	HGNC	ENSG00000197253				36	0	0	36	8	18.1818
NPIPA5	0	genome.wustl.edu	37	16	15457778	15457778	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	15457778	15457778	T	G	SNP	NPIPA5	ENST00000360151	human	ensembl	74_37	-1	novel	missense	c.791	p.K264T	0.000	NULL	NULL	-	no_errors	NPIPA5	HGNC	ENSG00000183793				125	0	0	89	12	11.8812
NUBP2	0	genome.wustl.edu	37	16	1836884	1836884	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	1836884	1836884	T	C	SNP	NUBP2	ENST00000262302	human	ensembl	74_37	+1	known	missense	c.262	p.S88P	0.999	pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_ATPase_MipZ/NubP2/Cfd1,superfamily_P-loop_NTPase	pfam_ATPase-like_ParA/MinD,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_ATPase_MipZ/NubP2/Cfd1,pfam_Anion-transp_ATPase-like_dom,pfam_ArgK,superfamily_P-loop_NTPase	-	no_errors	NUBP2	HGNC	ENSG00000095906				44	0	0	21	5	19.2308
RPL3L	0	genome.wustl.edu	37	16	1995925	1995925	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	1995925	1995925	A	C	SNP	RPL3L	ENST00000268661	human	ensembl	74_37	-1	known	missense	c.958	p.F320V	1.000	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	-	no_errors	RPL3L	HGNC	ENSG00000140986				85	0	0	70	18	20.4545
GPR139	0	genome.wustl.edu	37	16	20043272	20043272	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	20043272	20043272	A	C	SNP	GPR139	ENST00000570682	human	ensembl	74_37	-1	known	missense	c.847	p.F283V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR139	HGNC	ENSG00000180269				156	0	0	113	8	6.61157
NDUFAB1	0	genome.wustl.edu	37	16	23593647	23593647	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	23593647	23593647	T	G	SNP	NDUFAB1	ENST00000007516	human	ensembl	74_37	-1	known	missense	c.429	p.E143D	1.000	pfam_Acyl_carrier_prot-like,superfamily_Acyl_carrier_prot-like,pfscan_Acyl_carrier_prot-like,tigrfam_Acyl_carrier	pfam_Acyl_carrier_prot-like,superfamily_Acyl_carrier_prot-like,pfscan_Acyl_carrier_prot-like,tigrfam_Acyl_carrier	-	no_errors	NDUFAB1	HGNC	ENSG00000004779				17	0	0	11	3	21.4286
C16orf82	0	genome.wustl.edu	37	16	27078600	27078600	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	27078600	27078600	A	C	SNP	C16orf82	ENST00000418886	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.137	-	-	-	no_errors	C16orf82	HGNC	ENSG00000234186				10	0	0	9	3	25
ITGAL	0	genome.wustl.edu	37	16	30495458	30495458	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	30495458	30495458	G	A	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.880	p.E294K	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844				211	0	0	115	50	30.303
PRR14	0	genome.wustl.edu	37	16	30667596	30667596	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	30667596	30667596	A	C	SNP	PRR14	ENST00000300835	human	ensembl	74_37	+1	known	missense	c.1722	p.E574D	0.992	NULL	NULL	-	no_errors	PRR14	HGNC	ENSG00000156858				84	0	0	51	20	28.169
SRCAP	0	genome.wustl.edu	37	16	30733499	30733499	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	30733499	30733499	A	T	SNP	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	missense	c.3598	p.N1200Y	0.998	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				137	0	0	86	29	25.2174
ORAI3	0	genome.wustl.edu	37	16	30964606	30964606	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	30964606	30964606	T	G	SNP	ORAI3	ENST00000318663	human	ensembl	74_37	+1	known	missense	c.329	p.L110R	1.000	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI3	HGNC	ENSG00000175938				114	0	0	56	29	34.1176
ITGAD	0	genome.wustl.edu	37	16	31405555	31405555	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	31405555	31405555	A	G	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	splice_site	c.32-2	e2-2	0.128	-	-	-	no_errors	ITGAD	HGNC	ENSG00000156886				40	0	0	35	9	20.4545
ZSCAN10	0	genome.wustl.edu	37	16	3140576	3140576	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	3140576	3140576	G	A	SNP	ZSCAN10	ENST00000252463	human	ensembl	74_37	-1	known	missense	c.694	p.P232S	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN10	HGNC	ENSG00000130182				104	0	0	63	8	11.2676
C16orf71	0	genome.wustl.edu	37	16	4787904	4787904	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	4787904	4787904	A	C	SNP	C16orf71	ENST00000299320	human	ensembl	74_37	+1	known	missense	c.233	p.K78T	0.001	NULL	NULL	-	no_errors	C16orf71	HGNC	ENSG00000166246				62	0	0	51	15	22.7273
ABCC12	0	genome.wustl.edu	37	16	48120544	48120544	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	48120544	48120544	A	C	SNP	ABCC12	ENST00000532355	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ABCC12	HGNC	ENSG00000140798				34	0	0	30	5	14.2857
PPL	0	genome.wustl.edu	37	16	4951037	4951037	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	4951037	4951037	T	G	SNP	PPL	ENST00000345988	human	ensembl	74_37	-1	known	missense	c.492	p.Q164H	0.996	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898				82	0	0	59	10	14.4928
CYLD	0	genome.wustl.edu	37	16	50830253	50830253	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	50830253	50830253	A	T	SNP	CYLD	ENST00000311559	human	ensembl	74_37	+1	known	missense	c.2705	p.N902I	1.000	pfscan_Peptidase_C19/C67	pfam_CAP-Gly_domain,pfam_Peptidase_C19/C67,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain,pfscan_Peptidase_C19/C67	-	no_errors	CYLD	HGNC	ENSG00000083799				86	0	0	60	24	28.5714
CCDC135	0	genome.wustl.edu	37	16	57760158	57760158	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	57760158	57760158	A	C	SNP	CCDC135	ENST00000360716	human	ensembl	74_37	+1	known	missense	c.1937	p.K646T	1.000	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625				96	0	0	36	15	29.4118
USB1	0	genome.wustl.edu	37	16	58048232	58048232	+	Splice_Site	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	58048232	58048232	T	A	SNP	USB1	ENST00000219281	human	ensembl	74_37	+1	known	splice_site	c.503+2	e4+2	0.991	-	-	-	no_errors	USB1	HGNC	ENSG00000103005				37	0	0	25	6	19.3548
CSNK2A2	0	genome.wustl.edu	37	16	58201605	58201605	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	58201605	58201605	A	G	SNP	CSNK2A2	ENST00000262506	human	ensembl	74_37	-1	known	missense	c.608	p.L203P	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK2A2	HGNC	ENSG00000070770				70	0	0	53	24	31.1688
NFATC3	0	genome.wustl.edu	37	16	68156367	68156367	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	68156367	68156367	C	T	SNP	NFATC3	ENST00000346183	human	ensembl	74_37	+1	known	missense	c.581	p.S194L	1.000	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC3	HGNC	ENSG00000072736				125	0	0	49	17	25.7576
COG8	0	genome.wustl.edu	37	16	69366594	69366594	+	Nonstop_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	69366594	69366594	T	G	SNP	COG8	ENST00000562081	human	ensembl	74_37	-1	novel	nonstop	c.1605	p.*535Y	0.001	NULL	pfam_COG8,superfamily_Cullin_repeat-like_dom,pirsf_COG8_Metazoal_Plant	-	no_errors	COG8	HGNC	ENSG00000213380				97	0	0	59	10	14.4928
HYDIN	0	genome.wustl.edu	37	16	71008176	71008176	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	71008176	71008176	T	G	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.4937	p.K1646T	1.000	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				16	0	0	17	10	37.037
CMTR2	0	genome.wustl.edu	37	16	71317997	71317997	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	71317997	71317997	A	G	SNP	CMTR2	ENST00000338099	human	ensembl	74_37	-1	known	silent	c.1827	p.T609	0.900	NULL	pfam_rRNA_MeTrfase_FtsJ_dom	-	no_errors	CMTR2	HGNC	ENSG00000180917				80	0	0	63	15	19.2308
TAT	0	genome.wustl.edu	37	16	71610309	71610309	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	71610309	71610309	A	G	SNP	TAT	ENST00000355962	human	ensembl	74_37	-1	known	missense	c.10	p.Y4H	0.998	pfam_Tyr_aminoTrfase_ubiquitination,pirsf_Tyrosine_transaminase	pfam_Aminotransferase_I/II,pfam_Tyr_aminoTrfase_ubiquitination,pfam_ArAA_b-elim_lyase/Thr_aldolase,pfam_Aminotrans_V/Cys_dSase,pfam_DegT/StrS_aminotransferase,superfamily_PyrdxlP-dep_Trfase,pirsf_Tyrosine_transaminase,tigrfam_Tyrosine_aminoTrfase,tigrfam_TyrNic_aminoTrfase	-	no_errors	TAT	HGNC	ENSG00000198650				83	0	0	44	14	24.1379
HP	0	genome.wustl.edu	37	16	72094025	72094025	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	72094025	72094025	A	G	SNP	HP	ENST00000355906	human	ensembl	74_37	+1	known	missense	c.457	p.K153E	0.008	superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HP	HGNC	ENSG00000257017				32	0	0	24	9	27.2727
LDHD	0	genome.wustl.edu	37	16	75147704	75147704	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	75147704	75147704	C	T	SNP	LDHD	ENST00000300051	human	ensembl	74_37	-1	known	silent	c.963	p.A321	0.008	pfam_FAD-linked_oxidase_C,superfamily_FAD-linked_Oxase-like_C	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-linked_Oxase-like_C,superfamily_FAD-bd_2	-	no_errors	LDHD	HGNC	ENSG00000166816				112	0	0	66	19	22.3529
KARS	0	genome.wustl.edu	37	16	75664405	75664405	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	75664405	75664405	A	C	SNP	KARS	ENST00000319410	human	ensembl	74_37	-1	known	missense	c.1424	p.L475R	1.000	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Lys-tRNA-ligase_II	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pfscan_aa-tRNA-synth_II,prints_Lys-tRNA-synth_II_C,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Lys-tRNA-ligase_II	-	no_errors	KARS	HGNC	ENSG00000065427				56	0	0	41	6	12.766
CNTNAP4	0	genome.wustl.edu	37	16	76486611	76486611	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	76486611	76486611	A	T	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	silent	c.1275	p.G425	0.996	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910				57	0	0	36	14	28
PLCG2	0	genome.wustl.edu	37	16	81953163	81953163	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	81953163	81953163	T	C	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	missense	c.2129	p.F710S	1.000	pfam_SH2,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_SH2,pirsf_PLC-gamma,pfscan_SH2,prints_SH2	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943				100	0	0	74	20	21.2766
SDR42E1	0	genome.wustl.edu	37	16	82033269	82033269	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	82033269	82033269	T	G	SNP	SDR42E1	ENST00000328945	human	ensembl	74_37	-1	known	missense	c.629	p.K210T	0.694	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like	-	no_errors	SDR42E1	HGNC	ENSG00000184860				218	0	0	156	23	12.8492
ZCCHC14	0	genome.wustl.edu	37	16	87446364	87446364	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	87446364	87446364	T	C	SNP	ZCCHC14	ENST00000268616	human	ensembl	74_37	-1	known	missense	c.1552	p.R518G	0.012	NULL	pfam_SAM_type1,pfam_Znf_CCHC,superfamily_Phox,superfamily_SAM/pointed,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC14	HGNC	ENSG00000140948				87	0	0	69	24	25.8065
PRDM7	0	genome.wustl.edu	37	16	90128557	90128557	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	90128557	90128557	A	G	SNP	PRDM7	ENST00000568473	human	ensembl	74_37	-1	known	missense	c.395	p.L132P	0.083	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM7	HGNC	ENSG00000126856				54	0	0	58	13	18.3099
MYH8	0	genome.wustl.edu	37	17	10300237	10300237	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	10300237	10300237	A	C	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	silent	c.4245	p.A1415	0.923	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020				88	0	0	71	17	19.3182
MYH1	0	genome.wustl.edu	37	17	10415458	10415458	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	10415458	10415458	T	G	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.1199	p.K400T	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061				272	0	0	196	34	14.7826
MYH2	0	genome.wustl.edu	37	17	10428180	10428180	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	10428180	10428180	T	G	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	missense	c.4865	p.K1622T	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414				155	0	0	120	34	22.0779
MYH2	0	genome.wustl.edu	37	17	10428375	10428375	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	10428375	10428375	A	C	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	missense	c.4670	p.L1557R	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414				150	0	0	110	10	8.33333
DNAH9	0	genome.wustl.edu	37	17	11572875	11572875	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	11572875	11572875	A	C	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.3117	p.E1039D	0.067	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				150	0	0	103	29	21.9697
NCOR1	0	genome.wustl.edu	37	17	15965203	15965203	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	15965203	15965203	A	T	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	missense	c.5393	p.L1798Q	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027				75	0	0	55	7	11.2903
CCDC144A	0	genome.wustl.edu	37	17	16612142	16612142	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	16612142	16612142	T	G	SNP	CCDC144A	ENST00000360524	human	ensembl	74_37	+1	known	missense	c.771	p.D257E	0.232	NULL	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160				97	0	0	53	25	32.0513
SMYD4	0	genome.wustl.edu	37	17	1704257	1704257	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	1704257	1704257	T	A	SNP	SMYD4	ENST00000305513	human	ensembl	74_37	-1	known	missense	c.431	p.K144M	0.998	NULL	pfam_SET_dom,pfam_Znf_MYND,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD4	HGNC	ENSG00000186532				220	0	0	162	28	14.7368
MYO15A	0	genome.wustl.edu	37	17	18044990	18044990	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	18044990	18044990	A	G	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.5555	p.K1852R	0.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				136	0	0	60	16	21.0526
MYO15A	0	genome.wustl.edu	37	17	18054711	18054711	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	18054711	18054711	T	G	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.7657	p.S2553A	0.489	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				92	0	0	35	15	30
MFAP4	0	genome.wustl.edu	37	17	19288525	19288525	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	19288525	19288525	T	A	SNP	MFAP4	ENST00000395592	human	ensembl	74_37	-1	known	missense	c.479	p.E160V	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	MFAP4	HGNC	ENSG00000166482				121	0	0	72	6	7.69231
ATAD5	0	genome.wustl.edu	37	17	29185224	29185224	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	29185224	29185224	T	A	SNP	ATAD5	ENST00000321990	human	ensembl	74_37	+1	known	missense	c.2839	p.L947M	0.991	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD5	HGNC	ENSG00000176208				75	0	0	54	11	16.9231
CCL1	0	genome.wustl.edu	37	17	32690125	32690125	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	32690125	32690125	T	G	SNP	CCL1	ENST00000225842	human	ensembl	74_37	-1	known	missense	c.56	p.E19A	0.000	NULL	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL1	HGNC	ENSG00000108702				66	0	0	44	5	10.2041
LIG3	0	genome.wustl.edu	37	17	33310344	33310344	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	33310344	33310344	A	C	SNP	LIG3	ENST00000378526	human	ensembl	74_37	+1	known	missense	c.320	p.K107T	1.000	pfam_Znf_PARP,pfscan_Znf_PARP	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156				76	0	0	67	12	15.1899
SPATA22	0	genome.wustl.edu	37	17	3352328	3352328	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	3352328	3352328	T	A	SNP	SPATA22	ENST00000397168	human	ensembl	74_37	-1	known	missense	c.445	p.S149C	0.066	NULL	NULL	-	no_errors	SPATA22	HGNC	ENSG00000141255				188	0	0	118	60	33.7079
SLFN13	0	genome.wustl.edu	37	17	33768966	33768966	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	33768966	33768966	T	G	SNP	SLFN13	ENST00000285013	human	ensembl	74_37	-1	known	missense	c.1538	p.K513T	0.001	NULL	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN13	HGNC	ENSG00000154760				49	0	0	31	6	16.2162
ENSG00000266999	0	genome.wustl.edu	37	17	34233878	34233878	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	34233878	34233878	T	G	SNP	ENSG00000266999	ENST00000587132	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC015849.16	Clone_based_vega_gene	ENSG00000266999				36	0	0	39	4	9.30233
LYZL6	0	genome.wustl.edu	37	17	34264911	34264911	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	34264911	34264911	A	G	SNP	LYZL6	ENST00000293274	human	ensembl	74_37	-1	known	missense	c.149	p.L50P	0.996	pfam_Glyco_hydro_22,pfam_TGlycosylase-like_SLT,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22	pfam_Glyco_hydro_22,pfam_TGlycosylase-like_SLT,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22,prints_Glyco_hydro_22_lys	-	no_errors	LYZL6	HGNC	ENSG00000161572				48	0	0	51	6	10.5263
ACACA	0	genome.wustl.edu	37	17	35536243	35536243	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	35536243	35536243	T	A	SNP	ACACA	ENST00000353139	human	ensembl	74_37	-1	known	missense	c.5037	p.Q1679H	1.000	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142				88	0	0	53	23	30.2632
GPR179	0	genome.wustl.edu	37	17	36486628	36486628	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	36486628	36486628	A	C	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	missense	c.2824	p.L942V	0.982	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888				24	0	0	11	4	26.6667
RARA	0	genome.wustl.edu	37	17	38498886	38498886	+	RNA	SNP	C	C	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	38498886	38498886	C	A	SNP	RARA	ENST00000579727	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	RARA	HGNC	ENSG00000131759				29	0	0	25	10	28.5714
KRT25	0	genome.wustl.edu	37	17	38911503	38911503	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	38911503	38911503	A	G	SNP	KRT25	ENST00000312150	human	ensembl	74_37	-1	known	silent	c.21	p.S7	0.697	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT25	HGNC	ENSG00000204897				63	0	0	43	6	12.2449
KRT38	0	genome.wustl.edu	37	17	39593675	39593675	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	39593675	39593675	T	G	SNP	KRT38	ENST00000246646	human	ensembl	74_37	-1	known	missense	c.1360	p.S454R	0.006	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT38	HGNC	ENSG00000171360				22	0	0	14	3	17.6471
BECN1	0	genome.wustl.edu	37	17	40963766	40963766	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	40963766	40963766	T	C	SNP	BECN1	ENST00000361523	human	ensembl	74_37	-1	known	missense	c.1091	p.K364R	1.000	pfam_Beclin_fam	pfam_Beclin_fam,superfamily_Translin	-	no_errors	BECN1	HGNC	ENSG00000126581				149	0	0	95	45	32.1429
BRCA1	0	genome.wustl.edu	37	17	41228549	41228549	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	41228549	41228549	A	G	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	silent	c.4503	p.S1501	0.032	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				110	0	0	68	12	15
BRCA1	0	genome.wustl.edu	37	17	41243775	41243775	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	41243775	41243775	T	C	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.3773	p.E1258G	0.353	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				167	0	0	160	13	7.51445
GPATCH8	0	genome.wustl.edu	37	17	42477192	42477192	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	42477192	42477192	T	C	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	silent	c.2253	p.Q751	0.624	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				88	0	0	59	4	6.34921
FZD2	0	genome.wustl.edu	37	17	42636483	42636483	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	42636483	42636483	T	A	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	missense	c.1427	p.V476D	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340				70	0	0	36	21	36.8421
MAPT	0	genome.wustl.edu	37	17	44067437	44067437	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	44067437	44067437	T	G	SNP	MAPT	ENST00000344290	human	ensembl	74_37	+1	known	missense	c.1376	p.L459R	0.998	NULL	pfam_MAP_tubulin-bd_rpt,prints_Tau	-	no_errors	MAPT	HGNC	ENSG00000186868				130	0	0	97	7	6.73077
WNT9B	0	genome.wustl.edu	37	17	44952679	44952679	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	44952679	44952679	A	T	SNP	WNT9B	ENST00000290015	human	ensembl	74_37	+1	known	missense	c.547	p.N183Y	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt	-	no_errors	WNT9B	HGNC	ENSG00000158955				49	0	0	25	18	41.8605
KIF1C	0	genome.wustl.edu	37	17	4925494	4925494	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	4925494	4925494	C	T	SNP	KIF1C	ENST00000320785	human	ensembl	74_37	+1	known	silent	c.2118	p.T706	1.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1C	HGNC	ENSG00000129250				73	0	0	45	12	21.0526
USP6	0	genome.wustl.edu	37	17	5044777	5044777	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	5044777	5044777	A	C	SNP	USP6	ENST00000250066	human	ensembl	74_37	+1	known	missense	c.1556	p.K519T	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP6	HGNC	ENSG00000129204				61	0	0	45	4	8.16327
KIF2B	0	genome.wustl.edu	37	17	51901856	51901856	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	51901856	51901856	A	C	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.1462	p.N488H	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200				65	0	0	46	6	11.5385
EPX	0	genome.wustl.edu	37	17	56280628	56280628	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	56280628	56280628	T	G	SNP	EPX	ENST00000225371	human	ensembl	74_37	+1	known	missense	c.1895	p.L632R	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	EPX	HGNC	ENSG00000121053				94	0	0	69	8	10.3896
LPO	0	genome.wustl.edu	37	17	56345352	56345352	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	56345352	56345352	T	G	SNP	LPO	ENST00000262290	human	ensembl	74_37	+1	known	missense	c.2136	p.N712K	0.002	NULL	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	LPO	HGNC	ENSG00000167419				83	0	0	52	21	28.7671
SMG8	0	genome.wustl.edu	37	17	57288500	57288500	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	57288500	57288500	A	T	SNP	SMG8	ENST00000300917	human	ensembl	74_37	+1	known	missense	c.1088	p.D363V	0.998	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447				82	0	0	81	9	10
ACE	0	genome.wustl.edu	37	17	61571295	61571295	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	61571295	61571295	A	C	SNP	ACE	ENST00000290866	human	ensembl	74_37	+1	known	missense	c.3149	p.N1050T	1.000	pfam_Peptidase_M2	pfam_Peptidase_M2,prints_Peptidase_M2	-	no_errors	ACE	HGNC	ENSG00000159640				67	0	0	58	8	12.1212
KCNH6	0	genome.wustl.edu	37	17	61607903	61607903	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	61607903	61607903	G	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	silent	c.675	p.Q225	1.000	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826				53	0	0	38	17	30.9091
KCNH6	0	genome.wustl.edu	37	17	61613064	61613064	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	61613064	61613064	G	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	missense	c.1136	p.R379Q	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826				87	0	0	47	19	28.7879
FTSJ3	0	genome.wustl.edu	37	17	61897227	61897227	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	61897227	61897227	T	G	SNP	FTSJ3	ENST00000427159	human	ensembl	74_37	-1	known	silent	c.2479	p.R827	0.861	pfam_rRNA_MeTfrase_Spb1_C	pfam_rRNA_MeTfrase_Spb1_C,pfam_rRNA_MeTrfase_FtsJ_dom,pfam_rRNA_MeTfrase_Spb1_DUF3381	-	no_errors	FTSJ3	HGNC	ENSG00000108592				190	0	0	153	9	5.55556
LRRC37A3	0	genome.wustl.edu	37	17	62893362	62893362	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	62893362	62893362	T	C	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	missense	c.14	p.Q5R	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809				182	0	0	188	11	5.52764
CEP112	0	genome.wustl.edu	37	17	63957711	63957711	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	63957711	63957711	T	A	SNP	CEP112	ENST00000392769	human	ensembl	74_37	-1	known	missense	c.1742	p.K581I	1.000	NULL	superfamily_t-SNARE	-	no_errors	CEP112	HGNC	ENSG00000154240				90	0	0	72	12	14.2857
KIAA0753	0	genome.wustl.edu	37	17	6531699	6531699	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	6531699	6531699	T	G	SNP	KIAA0753	ENST00000361413	human	ensembl	74_37	-1	known	missense	c.456	p.Q152H	0.002	NULL	NULL	-	no_errors	KIAA0753	HGNC	ENSG00000198920				89	0	0	64	7	9.85915
TEKT1	0	genome.wustl.edu	37	17	6716238	6716238	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	6716238	6716238	T	C	SNP	TEKT1	ENST00000338694	human	ensembl	74_37	-1	known	missense	c.764	p.K255R	0.972	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT1	HGNC	ENSG00000167858				137	0	0	131	8	5.7554
SDK2	0	genome.wustl.edu	37	17	71398177	71398177	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	71398177	71398177	T	G	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	missense	c.2588	p.K863T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				45	0	0	25	10	28.5714
CD300E	0	genome.wustl.edu	37	17	72613331	72613331	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	72613331	72613331	T	G	SNP	CD300E	ENST00000426295	human	ensembl	74_37	-1	known	missense	c.437	p.K146T	0.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD300E	HGNC	ENSG00000186407				149	0	0	87	28	24.3478
TNK1	0	genome.wustl.edu	37	17	7291747	7291747	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	7291747	7291747	A	G	SNP	TNK1	ENST00000576812	human	ensembl	74_37	+1	known	silent	c.1515	p.S505	0.749	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TNK1	HGNC	ENSG00000174292				56	0	0	36	6	14.2857
CYTH1	0	genome.wustl.edu	37	17	76698666	76698666	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	76698666	76698666	T	G	SNP	CYTH1	ENST00000361101	human	ensembl	74_37	-1	known	missense	c.191	p.K64T	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH1	HGNC	ENSG00000108669				123	0	0	78	37	32.1739
DNAH2	0	genome.wustl.edu	37	17	7696052	7696052	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	7696052	7696052	A	C	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	missense	c.7223	p.N2408T	0.004	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914				56	0	0	41	4	8.88889
BAIAP2	0	genome.wustl.edu	37	17	79073837	79073837	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	79073837	79073837	A	G	SNP	BAIAP2	ENST00000321300	human	ensembl	74_37	+1	known	missense	c.599	p.K200R	1.000	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2	HGNC	ENSG00000175866				67	0	0	45	20	30.7692
ZNF750	0	genome.wustl.edu	37	17	80788538	80788538	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	80788538	80788538	A	C	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	missense	c.1652	p.L551R	0.830	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579				118	0	0	86	10	10.4167
TBCD	0	genome.wustl.edu	37	17	80888470	80888470	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	80888470	80888470	T	G	SNP	TBCD	ENST00000355528	human	ensembl	74_37	+1	known	missense	c.3064	p.F1022V	0.557	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	-	no_errors	TBCD	HGNC	ENSG00000141556				65	0	0	35	3	7.89474
NTN1	0	genome.wustl.edu	37	17	8926112	8926112	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	8926112	8926112	A	C	SNP	NTN1	ENST00000173229	human	ensembl	74_37	+1	known	missense	c.422	p.K141T	1.000	pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_N,pfam_Netrin_module_non-TIMP,pfam_EGF_laminin,superfamily_TIMP-like_OB-fold,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_Netrin_module_non-TIMP,pfscan_EGF_laminin,pfscan_Laminin_N,pfscan_Netrin_domain	-	no_errors	NTN1	HGNC	ENSG00000065320				13	0	0	19	6	24
PTPN2	0	genome.wustl.edu	37	18	12817314	12817314	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	12817314	12817314	A	C	SNP	PTPN2	ENST00000309660	human	ensembl	74_37	-1	known	missense	c.546	p.D182E	1.000	pirsf_Ptpn1/Ptpn2,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Ptpn1/Ptpn2,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN2	HGNC	ENSG00000175354				92	0	0	33	19	36.5385
RBBP8	0	genome.wustl.edu	37	18	20573460	20573460	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	20573460	20573460	A	T	SNP	RBBP8	ENST00000327155	human	ensembl	74_37	+1	known	missense	c.1670	p.E557V	0.832	NULL	pfam_CtIP_N,pfam_DNA-repair_Sae2/CtIP	-	no_errors	RBBP8	HGNC	ENSG00000101773				73	0	0	43	13	23.2143
NDC80	0	genome.wustl.edu	37	18	2577822	2577822	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	2577822	2577822	T	G	SNP	NDC80	ENST00000261597	human	ensembl	74_37	+1	known	missense	c.257	p.L86R	1.000	pfam_Kinetochore_Ndc80	pfam_Kinetochore_Ndc80,superfamily_t-SNARE	-	no_errors	NDC80	HGNC	ENSG00000080986				91	0	0	68	15	18.0723
MAPRE2	0	genome.wustl.edu	37	18	32706943	32706943	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	32706943	32706943	A	T	SNP	MAPRE2	ENST00000300249	human	ensembl	74_37	+1	known	silent	c.642	p.P214	0.993	NULL	pfam_EB1_C,pfam_CH-domain,superfamily_CH-domain,superfamily_EB1_C,pfscan_CH-domain	-	no_errors	MAPRE2	HGNC	ENSG00000166974				99	0	0	50	9	15.2542
KIAA1328	0	genome.wustl.edu	37	18	34740221	34740221	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	34740221	34740221	C	T	SNP	KIAA1328	ENST00000280020	human	ensembl	74_37	+1	known	missense	c.1291	p.H431Y	0.000	NULL	NULL	-	no_errors	KIAA1328	HGNC	ENSG00000150477				30	0	0	21	5	19.2308
WDR7	0	genome.wustl.edu	37	18	54363663	54363663	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	54363663	54363663	T	A	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	silent	c.1548	p.T516	0.968	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157				84	0	0	43	7	14
SEC11C	0	genome.wustl.edu	37	18	56825903	56825903	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	56825903	56825903	A	C	SNP	SEC11C	ENST00000587834	human	ensembl	74_37	+1	known	missense	c.565	p.K189Q	0.998	NULL	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Peptidase_S26B,tigrfam_Peptidase_S26B	-	no_errors	SEC11C	HGNC	ENSG00000166562				82	0	0	40	8	16.6667
SERPINB4	0	genome.wustl.edu	37	18	61309092	61309092	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	61309092	61309092	A	T	SNP	SERPINB4	ENST00000341074	human	ensembl	74_37	-1	known	missense	c.253	p.F85I	0.973	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB4	HGNC	ENSG00000206073				110	0	0	47	23	32.8571
SERPINB3	0	genome.wustl.edu	37	18	61326731	61326731	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	61326731	61326731	A	T	SNP	SERPINB3	ENST00000283752	human	ensembl	74_37	-1	known	missense	c.253	p.F85I	0.917	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB3	HGNC	ENSG00000057149				158	0	0	88	12	12
SERPINB11	0	genome.wustl.edu	37	18	61377558	61377558	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	61377558	61377558	T	G	SNP	SERPINB11	ENST00000538847	human	ensembl	74_37	+1	known	missense	c.131	p.L44R	0.996	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB11	HGNC	ENSG00000206072				48	0	0	11	15	57.6923
SERPINB2	0	genome.wustl.edu	37	18	61564434	61564434	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	61564434	61564434	A	C	SNP	SERPINB2	ENST00000299502	human	ensembl	74_37	+1	known	missense	c.398	p.K133T	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB2	HGNC	ENSG00000197632				89	0	0	40	22	35.4839
LAMA1	0	genome.wustl.edu	37	18	6978368	6978368	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	6978368	6978368	T	C	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.6017	p.D2006G	0.028	NULL	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				92	0	0	40	14	25.9259
LRRC30	0	genome.wustl.edu	37	18	7231432	7231432	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	7231432	7231432	T	G	SNP	LRRC30	ENST00000383467	human	ensembl	74_37	+1	known	missense	c.296	p.L99R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC30	HGNC	ENSG00000206422				68	0	0	25	17	40.4762
SALL3	0	genome.wustl.edu	37	18	76754796	76754796	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	76754796	76754796	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	silent	c.2805	p.T935	0.022	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				25	0	0	7	4	36.3636
SOGA2	0	genome.wustl.edu	37	18	8825346	8825346	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	8825346	8825346	T	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.3838	p.L1280M	0.988	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				64	0	0	31	8	20.5128
RALBP1	0	genome.wustl.edu	37	18	9535697	9535697	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	9535697	9535697	T	G	SNP	RALBP1	ENST00000019317	human	ensembl	74_37	+1	known	missense	c.1730	p.I577S	0.975	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	RALBP1	HGNC	ENSG00000017797				24	0	0	15	4	21.0526
RGL3	0	genome.wustl.edu	37	19	11515881	11515881	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	11515881	11515881	A	G	SNP	RGL3	ENST00000393423	human	ensembl	74_37	-1	known	missense	c.1127	p.L376P	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL3	HGNC	ENSG00000205517				170	0	0	102	18	15
ZNF653	0	genome.wustl.edu	37	19	11597811	11597811	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	11597811	11597811	T	C	SNP	ZNF653	ENST00000293771	human	ensembl	74_37	-1	known	missense	c.1334	p.E445G	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF653	HGNC	ENSG00000161914				60	0	0	52	7	11.8644
ZNF441	0	genome.wustl.edu	37	19	11891643	11891643	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	11891643	11891643	C	T	SNP	ZNF441	ENST00000357901	human	ensembl	74_37	+1	known	missense	c.1004	p.P335L	0.976	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF441	HGNC	ENSG00000197044				158	0	0	106	25	19.084
ZNF563	0	genome.wustl.edu	37	19	12429443	12429443	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	12429443	12429443	T	G	SNP	ZNF563	ENST00000293725	human	ensembl	74_37	-1	known	silent	c.1396	p.R466	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF563	HGNC	ENSG00000188868				134	0	0	101	11	9.82143
ZNF442	0	genome.wustl.edu	37	19	12461443	12461443	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	12461443	12461443	T	G	SNP	ZNF442	ENST00000242804	human	ensembl	74_37	-1	known	missense	c.956	p.K319T	0.928	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF442	HGNC	ENSG00000198342				288	0	0	230	31	11.8774
ZNF799	0	genome.wustl.edu	37	19	12502375	12502375	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	12502375	12502375	T	C	SNP	ZNF799	ENST00000430385	human	ensembl	74_37	-1	known	silent	c.837	p.K279	0.949	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF799	HGNC	ENSG00000196466				163	0	0	118	41	25.7862
PRKACA	0	genome.wustl.edu	37	19	14208394	14208394	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	14208394	14208394	G	C	SNP	PRKACA	ENST00000308677	human	ensembl	74_37	-1	known	missense	c.639	p.S213R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACA	HGNC	ENSG00000072062				67	0	0	52	15	22.3881
LPHN1	0	genome.wustl.edu	37	19	14271421	14271421	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	14271421	14271421	T	G	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	missense	c.1613	p.N538T	1.000	smart_GPCR_2_extracellular_dom	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071				17	0	0	15	3	16.6667
EMR2	0	genome.wustl.edu	37	19	14857053	14857053	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	14857053	14857053	C	T	SNP	EMR2	ENST00000315576	human	ensembl	74_37	-1	known	missense	c.2174	p.R725Q	0.970	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_CD97,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	EMR2	HGNC	ENSG00000127507				232	0	0	156	39	20
SLC1A6	0	genome.wustl.edu	37	19	15061178	15061178	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	15061178	15061178	G	T	SNP	SLC1A6	ENST00000221742	human	ensembl	74_37	-1	known	missense	c.1524	p.N508K	0.982	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A6	HGNC	ENSG00000105143				78	0	0	47	16	25.3968
OR10H2	0	genome.wustl.edu	37	19	15839343	15839343	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	15839343	15839343	T	G	SNP	OR10H2	ENST00000305899	human	ensembl	74_37	+1	known	missense	c.490	p.F164V	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H2	HGNC	ENSG00000171942				90	0	0	66	13	16.4557
CPAMD8	0	genome.wustl.edu	37	19	17088246	17088246	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	17088246	17088246	C	T	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.1831	p.V611I	1.000	pfam_A2M_N_2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				101	0	0	54	21	28
UNC13A	0	genome.wustl.edu	37	19	17728589	17728589	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	17728589	17728589	A	C	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	missense	c.4744	p.L1582V	0.998	pfam_Munc13_subgr_dom-2	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477				106	0	0	65	29	30.8511
GDF15	0	genome.wustl.edu	37	19	18499616	18499616	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	18499616	18499616	C	T	SNP	GDF15	ENST00000252809	human	ensembl	74_37	+1	known	silent	c.798	p.P266	0.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	GDF15	HGNC	ENSG00000130513				59	0	0	19	9	32.1429
ZNF93	0	genome.wustl.edu	37	19	20044675	20044675	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	20044675	20044675	A	C	SNP	ZNF93	ENST00000343769	human	ensembl	74_37	+1	known	missense	c.911	p.K304T	0.989	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF93	HGNC	ENSG00000184635				49	0	0	38	11	22.449
ZNF493	0	genome.wustl.edu	37	19	21606364	21606364	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	21606364	21606364	T	G	SNP	ZNF493	ENST00000355504	human	ensembl	74_37	+1	known	silent	c.519	p.T173	0.410	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF493	HGNC	ENSG00000196268				93	0	0	64	20	23.8095
ZNF43	0	genome.wustl.edu	37	19	21990896	21990896	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	21990896	21990896	T	G	SNP	ZNF43	ENST00000354959	human	ensembl	74_37	-1	known	missense	c.1943	p.K648T	0.985	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF43	HGNC	ENSG00000198521				76	0	0	43	10	18.8679
ZNF681	0	genome.wustl.edu	37	19	23927176	23927176	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	23927176	23927176	T	G	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	missense	c.1176	p.K392N	0.982	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172				86	0	0	40	15	27.2727
LMNB2	0	genome.wustl.edu	37	19	2433832	2433832	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	2433832	2433832	A	G	SNP	LMNB2	ENST00000325327	human	ensembl	74_37	-1	known	missense	c.1474	p.S492P	0.405	pfam_Lamin_tail_dom	pfam_IF,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNB2	HGNC	ENSG00000176619				106	1	0.934579	63	23	26.7442
SGTA	0	genome.wustl.edu	37	19	2767593	2767593	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	2767593	2767593	C	T	SNP	SGTA	ENST00000221566	human	ensembl	74_37	-1	known	silent	c.192	p.A64	0.402	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SGTA	HGNC	ENSG00000104969				47	0	0	36	6	14.2857
ZNF556	0	genome.wustl.edu	37	19	2877903	2877903	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	2877903	2877903	A	C	SNP	ZNF556	ENST00000307635	human	ensembl	74_37	+1	known	missense	c.947	p.K316T	0.013	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF556	HGNC	ENSG00000172000				60	0	0	45	7	13.4615
ARHGAP33	0	genome.wustl.edu	37	19	36275211	36275211	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	36275211	36275211	A	G	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.1559	p.D520G	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				193	1	0.515464	105	35	25
APLP1	0	genome.wustl.edu	37	19	36362645	36362645	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	36362645	36362645	T	G	SNP	APLP1	ENST00000221891	human	ensembl	74_37	+1	known	silent	c.669	p.V223	0.931	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,smart_Amyloid_glyco_extra,prints_Amyloid_glyco	-	no_errors	APLP1	HGNC	ENSG00000105290				63	0	0	41	6	12.766
PIP5K1C	0	genome.wustl.edu	37	19	3653457	3653457	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	3653457	3653457	T	C	SNP	PIP5K1C	ENST00000537021	human	ensembl	74_37	-1	known	missense	c.752	p.K251R	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1C	HGNC	ENSG00000186111				93	0	0	55	5	8.33333
ZFP82	0	genome.wustl.edu	37	19	36884189	36884189	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	36884189	36884189	T	G	SNP	ZFP82	ENST00000392161	human	ensembl	74_37	-1	known	missense	c.1053	p.Q351H	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP82	HGNC	ENSG00000181007				114	0	0	100	8	7.40741
ZFP82	0	genome.wustl.edu	37	19	36898797	36898797	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	36898797	36898797	A	C	SNP	ZFP82	ENST00000392161	human	ensembl	74_37	-1	known	missense	c.128	p.V43G	0.998	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP82	HGNC	ENSG00000181007				106	0	0	79	7	8.13953
ZNF382	0	genome.wustl.edu	37	19	37117974	37117974	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	37117974	37117974	A	C	SNP	ZNF382	ENST00000292928	human	ensembl	74_37	+1	known	missense	c.1175	p.K392T	0.911	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF382	HGNC	ENSG00000161298				100	0	0	79	22	21.7822
ZNF382	0	genome.wustl.edu	37	19	37118439	37118439	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	37118439	37118439	C	T	SNP	ZNF382	ENST00000292928	human	ensembl	74_37	+1	known	missense	c.1640	p.T547M	0.001	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF382	HGNC	ENSG00000161298				84	0	0	67	5	6.94444
ZNF585A	0	genome.wustl.edu	37	19	37642494	37642494	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	37642494	37642494	A	C	SNP	ZNF585A	ENST00000356958	human	ensembl	74_37	-1	known	silent	c.2307	p.A769	0.021	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585A	HGNC	ENSG00000196967				90	0	0	56	17	23.2877
ZNF793	0	genome.wustl.edu	37	19	38028502	38028502	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	38028502	38028502	T	G	SNP	ZNF793	ENST00000445217	human	ensembl	74_37	+1	known	missense	c.942	p.S314R	0.022	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF793	HGNC	ENSG00000188227				47	0	0	29	16	35.5556
ZNF573	0	genome.wustl.edu	37	19	38230164	38230164	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	38230164	38230164	A	T	SNP	ZNF573	ENST00000590414	human	ensembl	74_37	-1	known	silent	c.1227	p.T409	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF573	HGNC	ENSG00000189144				208	0	0	105	37	26.0563
ZNF573	0	genome.wustl.edu	37	19	38230495	38230495	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	38230495	38230495	T	A	SNP	ZNF573	ENST00000590414	human	ensembl	74_37	-1	known	missense	c.896	p.E299V	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF573	HGNC	ENSG00000189144				145	0	0	98	11	10.0917
RYR1	0	genome.wustl.edu	37	19	38995497	38995497	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	38995497	38995497	A	C	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.8177	p.K2726T	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				63	0	0	49	13	20.9677
EIF3K	0	genome.wustl.edu	37	19	39123298	39123298	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	39123298	39123298	A	G	SNP	EIF3K	ENST00000248342	human	ensembl	74_37	+1	known	missense	c.479	p.E160G	1.000	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25,superfamily_ARM-type_fold	-	no_errors	EIF3K	HGNC	ENSG00000178982				57	0	0	21	12	36.3636
LRFN1	0	genome.wustl.edu	37	19	39805078	39805078	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	39805078	39805078	A	C	SNP	LRFN1	ENST00000248668	human	ensembl	74_37	-1	known	missense	c.899	p.L300R	0.998	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN1	HGNC	ENSG00000128011				13	0	0	14	9	39.1304
ATP1A3	0	genome.wustl.edu	37	19	42479813	42479813	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	42479813	42479813	T	G	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	missense	c.2231	p.N744T	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409				109	0	0	78	23	22.7723
ATP1A3	0	genome.wustl.edu	37	19	42480634	42480634	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	42480634	42480634	G	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	silent	c.2028	p.T676	0.001	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409				75	0	0	47	22	31.8841
CEACAM8	0	genome.wustl.edu	37	19	43098046	43098046	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	43098046	43098046	A	C	SNP	CEACAM8	ENST00000244336	human	ensembl	74_37	-1	known	missense	c.71	p.L24R	0.033	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM8	HGNC	ENSG00000124469				178	0	0	109	33	23.2394
PSG8	0	genome.wustl.edu	37	19	43268119	43268119	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	43268119	43268119	C	T	SNP	PSG8	ENST00000306511	human	ensembl	74_37	-1	known	missense	c.379	p.G127R	0.000	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG8	HGNC	ENSG00000124467				465	0	0	340	49	12.5964
MPND	0	genome.wustl.edu	37	19	4345893	4345893	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	4345893	4345893	A	C	SNP	MPND	ENST00000262966	human	ensembl	74_37	+1	known	missense	c.446	p.K149T	1.000	NULL	pfam_JAB_MPN_dom	-	no_errors	MPND	HGNC	ENSG00000008382				59	0	0	37	18	32.7273
XRCC1	0	genome.wustl.edu	37	19	44050801	44050801	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	44050801	44050801	T	C	SNP	XRCC1	ENST00000262887	human	ensembl	74_37	-1	known	missense	c.1372	p.K458E	1.000	NULL	pfam_Xrcc1_N,pfam_BRCT_dom,superfamily_Galactose-bd-like,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	XRCC1	HGNC	ENSG00000073050				214	0	0	175	16	8.37696
CHAF1A	0	genome.wustl.edu	37	19	4409730	4409730	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	4409730	4409730	T	G	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.934	p.F312V	0.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670				102	0	0	78	15	16.129
ZNF224	0	genome.wustl.edu	37	19	44611504	44611504	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	44611504	44611504	A	C	SNP	ZNF224	ENST00000336976	human	ensembl	74_37	+1	known	missense	c.1191	p.E397D	0.998	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF224	HGNC	ENSG00000267680				118	0	0	65	33	33.6735
SLC8A2	0	genome.wustl.edu	37	19	47951490	47951490	+	Splice_Site	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	47951490	47951490	T	A	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	splice_site	c.1341-2	e3-2	0.984	-	-	-	no_errors	SLC8A2	HGNC	ENSG00000118160				57	0	0	23	5	17.8571
SLC8A2	0	genome.wustl.edu	37	19	47960262	47960262	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	47960262	47960262	T	A	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	missense	c.1265	p.E422V	1.000	pfam_Calx_beta,smart_Calx_beta,tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				15	0	0	17	5	22.7273
PLA2G4C	0	genome.wustl.edu	37	19	48608695	48608695	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	48608695	48608695	T	G	SNP	PLA2G4C	ENST00000413144	human	ensembl	74_37	-1	known	missense	c.15	p.E5D	0.006	superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4C	HGNC	ENSG00000105499				107	0	0	64	22	25.5814
MYBPC2	0	genome.wustl.edu	37	19	50951573	50951573	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	50951573	50951573	A	C	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	missense	c.1398	p.K466N	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967				186	0	0	83	36	30.2521
SYT3	0	genome.wustl.edu	37	19	51129247	51129247	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	51129247	51129247	A	C	SNP	SYT3	ENST00000338916	human	ensembl	74_37	-1	known	missense	c.1309	p.F437V	1.000	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT3	HGNC	ENSG00000213023				32	0	0	25	3	10.7143
SYT3	0	genome.wustl.edu	37	19	51140563	51140563	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	51140563	51140563	A	C	SNP	SYT3	ENST00000338916	human	ensembl	74_37	-1	known	missense	c.106	p.F36V	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT3	HGNC	ENSG00000213023				94	0	0	42	12	22.2222
KLK10	0	genome.wustl.edu	37	19	51520422	51520422	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	51520422	51520422	G	A	SNP	KLK10	ENST00000309958	human	ensembl	74_37	-1	known	silent	c.213	p.C71	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK10	HGNC	ENSG00000129451				31	0	0	13	9	40.9091
CD33	0	genome.wustl.edu	37	19	51742771	51742771	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	51742771	51742771	A	G	SNP	CD33	ENST00000262262	human	ensembl	74_37	+1	known	splice_site	c.925-2	e7-2	0.008	-	-	-	no_errors	CD33	HGNC	ENSG00000105383				64	0	0	46	21	31.3433
ZNF480	0	genome.wustl.edu	37	19	52825169	52825169	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	52825169	52825169	A	T	SNP	ZNF480	ENST00000468240	human	ensembl	74_37	+1	known	missense	c.666	p.Q222H	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF480	HGNC	ENSG00000198464				87	0	0	72	5	6.49351
ZNF816	0	genome.wustl.edu	37	19	53454176	53454176	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	53454176	53454176	A	C	SNP	ZNF816	ENST00000357666	human	ensembl	74_37	-1	known	silent	c.852	p.T284	0.919	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF816	HGNC	ENSG00000180257				200	0	0	154	23	12.9944
BIRC8	0	genome.wustl.edu	37	19	53793027	53793027	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	53793027	53793027	A	C	SNP	BIRC8	ENST00000426466	human	ensembl	74_37	-1	known	missense	c.601	p.F201V	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_BIR,smart_BIR,smart_Znf_RING,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC8	HGNC	ENSG00000163098				145	0	0	75	32	29.9065
ZNF331	0	genome.wustl.edu	37	19	54079977	54079977	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	54079977	54079977	A	C	SNP	ZNF331	ENST00000253144	human	ensembl	74_37	+1	known	missense	c.163	p.S55R	0.000	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF331	HGNC	ENSG00000130844				67	0	0	48	13	21.3115
LILRA5	0	genome.wustl.edu	37	19	54823827	54823827	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	54823827	54823827	A	G	SNP	LILRA5	ENST00000301219	human	ensembl	74_37	-1	known	missense	c.68	p.L23P	0.001	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116				62	0	0	31	6	16.2162
LENG8	0	genome.wustl.edu	37	19	54969734	54969734	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	54969734	54969734	C	T	SNP	LENG8	ENST00000431846	human	ensembl	74_37	+1	putative	silent	c.2274	p.L758	0.013	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	LENG8	HGNC	ENSG00000167615				55	0	0	32	3	8.57143
NCR1	0	genome.wustl.edu	37	19	55421419	55421419	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	55421419	55421419	T	G	SNP	NCR1	ENST00000291890	human	ensembl	74_37	+1	known	missense	c.676	p.F226V	0.001	NULL	smart_Ig_sub	-	no_errors	NCR1	HGNC	ENSG00000189430				225	0	0	184	16	8
NLRP7	0	genome.wustl.edu	37	19	55451541	55451541	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	55451541	55451541	T	C	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	missense	c.730	p.S244G	0.959	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634				107	0	0	50	25	33.3333
NLRP7	0	genome.wustl.edu	37	19	55453089	55453089	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	55453089	55453089	A	G	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	silent	c.75	p.T25	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634				49	0	0	24	11	31.4286
SYT5	0	genome.wustl.edu	37	19	55686273	55686273	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	55686273	55686273	T	G	SNP	SYT5	ENST00000354308	human	ensembl	74_37	-1	known	missense	c.803	p.K268T	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT5	HGNC	ENSG00000129990				109	0	0	51	11	17.7419
BRSK1	0	genome.wustl.edu	37	19	55800909	55800909	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	55800909	55800909	A	T	SNP	BRSK1	ENST00000590333	human	ensembl	74_37	+1	known	nonsense	c.427	p.R143*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	BRSK1	HGNC	ENSG00000160469				87	0	0	60	8	11.7647
ZNF628	0	genome.wustl.edu	37	19	55993985	55993985	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	55993985	55993985	C	G	SNP	ZNF628	ENST00000598519	human	ensembl	74_37	+1	known	missense	c.1425	p.D475E	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF628	HGNC	ENSG00000197483				43	0	0	28	5	15.1515
NLRP9	0	genome.wustl.edu	37	19	56249468	56249468	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	56249468	56249468	C	G	SNP	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	missense	c.273	p.E91D	0.902	superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				834	0	0	606	78	11.4035
NLRP9	0	genome.wustl.edu	37	19	56249481	56249481	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	56249481	56249481	T	G	SNP	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	missense	c.260	p.K87T	0.111	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				821	0	0	577	76	11.6386
ZNF471	0	genome.wustl.edu	37	19	57036399	57036399	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	57036399	57036399	A	G	SNP	ZNF471	ENST00000591537	human	ensembl	74_37	+1	putative	missense	c.542	p.K181R	0.572	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF471	HGNC	ENSG00000196263				125	0	0	105	13	11.0169
ZNF264	0	genome.wustl.edu	37	19	57723710	57723710	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	57723710	57723710	G	A	SNP	ZNF264	ENST00000263095	human	ensembl	74_37	+1	known	silent	c.1245	p.K415	0.046	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF264	HGNC	ENSG00000083844				66	0	0	54	13	19.403
ZNF548	0	genome.wustl.edu	37	19	57909914	57909914	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	57909914	57909914	G	T	SNP	ZNF548	ENST00000336128	human	ensembl	74_37	+1	known	nonsense	c.295	p.E99*	0.034	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF548	HGNC	ENSG00000188785				127	0	0	75	18	19.3548
ZNF772	0	genome.wustl.edu	37	19	57985254	57985254	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	57985254	57985254	T	C	SNP	ZNF772	ENST00000343280	human	ensembl	74_37	-1	known	silent	c.858	p.R286	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF772	HGNC	ENSG00000197128				132	0	0	89	34	27.6423
ZNF550	0	genome.wustl.edu	37	19	58059222	58059222	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	58059222	58059222	T	G	SNP	ZNF550	ENST00000376230	human	ensembl	74_37	-1	known	missense	c.390	p.E130D	0.192	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF550	HGNC	ENSG00000251369				373	0	0	246	88	26.3473
ZNF550	0	genome.wustl.edu	37	19	58067709	58067709	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	58067709	58067709	T	G	SNP	ZNF550	ENST00000376230	human	ensembl	74_37	-1	known	missense	c.44	p.K15T	0.866	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF550	HGNC	ENSG00000251369				134	0	0	65	22	25.2874
ZNF530	0	genome.wustl.edu	37	19	58117644	58117644	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	58117644	58117644	A	G	SNP	ZNF530	ENST00000332854	human	ensembl	74_37	+1	known	missense	c.751	p.S251G	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF530	HGNC	ENSG00000183647				83	0	0	80	8	9.09091
ZNF154	0	genome.wustl.edu	37	19	58213775	58213775	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	58213775	58213775	C	A	SNP	ZNF154	ENST00000426889	human	ensembl	74_37	-1	known	missense	c.542	p.R181I	0.044	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF154	HGNC	ENSG00000179909				224	0	0	118	64	35.1648
ZSCAN18	0	genome.wustl.edu	37	19	58597553	58597553	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	58597553	58597553	T	C	SNP	ZSCAN18	ENST00000600404	human	ensembl	74_37	-1	known	missense	c.994	p.S332G	0.007	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN18	HGNC	ENSG00000121413				86	0	0	54	4	6.89655
TRIM28	0	genome.wustl.edu	37	19	59057202	59057202	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	59057202	59057202	G	A	SNP	TRIM28	ENST00000253024	human	ensembl	74_37	+1	known	silent	c.525	p.E175	1.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	TRIM28	HGNC	ENSG00000130726				82	0	0	69	9	11.5385
VAV1	0	genome.wustl.edu	37	19	6772985	6772985	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	6772985	6772985	A	C	SNP	VAV1	ENST00000602142	human	ensembl	74_37	+1	known	missense	c.167	p.N56T	1.000	pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968				133	0	0	74	25	25.2525
ARHGEF18	0	genome.wustl.edu	37	19	7509198	7509198	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	7509198	7509198	G	A	SNP	ARHGEF18	ENST00000359920	human	ensembl	74_37	+1	known	missense	c.905	p.R302H	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF18	HGNC	ENSG00000104880				67	0	0	36	19	34.5455
C19orf59	0	genome.wustl.edu	37	19	7742562	7742562	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	7742562	7742562	T	G	SNP	C19orf59	ENST00000333598	human	ensembl	74_37	+1	known	missense	c.134	p.F45C	0.988	NULL	NULL	-	no_errors	C19orf59	HGNC	ENSG00000183019				88	0	0	58	13	18.3099
MUC16	0	genome.wustl.edu	37	19	9063622	9063622	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	9063622	9063622	A	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.23824	p.S7942A	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				101	0	0	74	27	26.7327
MUC16	0	genome.wustl.edu	37	19	9073199	9073199	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	9073199	9073199	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.14247	p.A4749	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				125	0	0	116	13	10.0775
MUC16	0	genome.wustl.edu	37	19	9076652	9076652	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	9076652	9076652	A	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.10794	p.T3598	0.008	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				115	0	0	66	33	33.3333
ZNF699	0	genome.wustl.edu	37	19	9406765	9406765	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	9406765	9406765	T	G	SNP	ZNF699	ENST00000308650	human	ensembl	74_37	-1	known	missense	c.1315	p.K439Q	0.862	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF699	HGNC	ENSG00000196110				69	0	0	65	4	5.7971
ZNF560	0	genome.wustl.edu	37	19	9578937	9578937	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	19	9578937	9578937	A	G	SNP	ZNF560	ENST00000301480	human	ensembl	74_37	-1	known	missense	c.686	p.L229P	0.096	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF560	HGNC	ENSG00000198028				115	0	0	80	14	14.8936
EIF5B	0	genome.wustl.edu	37	2	100015285	100015285	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	100015285	100015285	A	C	SNP	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	missense	c.3468	p.E1156D	1.000	superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				44	0	0	25	4	13.7931
AFF3	0	genome.wustl.edu	37	2	100217911	100217911	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	100217911	100217911	A	C	SNP	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	missense	c.1432	p.F478V	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218				21	0	0	10	7	41.1765
RRM2	0	genome.wustl.edu	37	2	10269377	10269377	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	10269377	10269377	A	C	SNP	RRM2	ENST00000360566	human	ensembl	74_37	+1	known	missense	c.1214	p.N405T	1.000	pfam_RNR_small,superfamily_Ferritin-like_SF	pfam_RNR_small,superfamily_Ferritin-like_SF	-	no_errors	RRM2	HGNC	ENSG00000171848				95	0	0	62	23	27.0588
RGPD3	0	genome.wustl.edu	37	2	107073515	107073515	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	107073515	107073515	T	G	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.317	p.K106T	0.697	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165				134	0	0	98	18	15.5172
RGPD4	0	genome.wustl.edu	37	2	108488388	108488388	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	108488388	108488388	A	C	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	missense	c.3928	p.N1310H	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862				292	0	0	179	72	28.6853
GCC2	0	genome.wustl.edu	37	2	109103051	109103051	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	109103051	109103051	A	C	SNP	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	missense	c.3877	p.S1293R	0.001	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968				80	0	0	44	24	35.2941
GCC2	0	genome.wustl.edu	37	2	109116111	109116111	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	109116111	109116111	T	C	SNP	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	silent	c.4885	p.L1629	1.000	pfam_GRIP,superfamily_GRIP,smart_GRIP,pfscan_GRIP	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968				482	0	0	402	35	8.00915
CYP27C1	0	genome.wustl.edu	37	2	127956986	127956986	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	127956986	127956986	T	G	SNP	CYP27C1	ENST00000335247	human	ensembl	74_37	-1	known	missense	c.518	p.N173T	0.958	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP27C1	HGNC	ENSG00000186684				112	0	0	94	9	8.73786
ERCC3	0	genome.wustl.edu	37	2	128050327	128050327	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	128050327	128050327	T	C	SNP	ERCC3	ENST00000285398	human	ensembl	74_37	-1	known	silent	c.330	p.P110	0.945	tigrfam_Helicase_Ercc3	pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_Helicase_Ercc3,tigrfam_Helicase_Ercc3	-	no_errors	ERCC3	HGNC	ENSG00000163161				107	0	0	66	28	29.7872
SAP130	0	genome.wustl.edu	37	2	128707874	128707874	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	128707874	128707874	T	G	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	missense	c.2609	p.K870T	1.000	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715				165	0	0	99	12	10.8108
IMP4	0	genome.wustl.edu	37	2	131103502	131103502	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	131103502	131103502	A	T	SNP	IMP4	ENST00000259239	human	ensembl	74_37	+1	known	missense	c.590	p.K197M	0.999	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	-	no_errors	IMP4	HGNC	ENSG00000136718				65	0	0	30	6	16.6667
LCT	0	genome.wustl.edu	37	2	136561695	136561695	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	136561695	136561695	T	A	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.4468	p.T1490S	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850				67	0	0	54	9	14.2857
NEB	0	genome.wustl.edu	37	2	152423760	152423760	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	152423760	152423760	A	C	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.18078	p.N6026K	0.989	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				133	0	0	86	17	16.5049
NEB	0	genome.wustl.edu	37	2	152520300	152520300	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	152520300	152520300	T	G	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.5525	p.K1842T	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				64	0	0	43	15	25.8621
NBAS	0	genome.wustl.edu	37	2	15607836	15607836	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	15607836	15607836	T	A	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.1970	p.K657M	0.001	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779				38	0	0	29	12	29.2683
SCN3A	0	genome.wustl.edu	37	2	166011114	166011114	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	166011114	166011114	A	T	SNP	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	missense	c.1228	p.L410M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253				104	0	0	76	5	6.17284
SCN2A	0	genome.wustl.edu	37	2	166210929	166210929	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	166210929	166210929	A	C	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.3147	p.K1049N	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531				100	0	0	65	6	8.4507
SCN2A	0	genome.wustl.edu	37	2	166237231	166237231	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	166237231	166237231	A	G	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.4438	p.K1480E	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531				36	0	0	43	5	10.4167
TTC21B	0	genome.wustl.edu	37	2	166797624	166797624	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	166797624	166797624	A	C	SNP	TTC21B	ENST00000243344	human	ensembl	74_37	-1	known	missense	c.623	p.F208C	1.000	smart_TPR_repeat	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607				77	0	0	58	8	12.1212
SCN1A	0	genome.wustl.edu	37	2	166901752	166901752	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	166901752	166901752	T	G	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.1463	p.K488T	1.000	pfam_DUF3451	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285				211	0	0	169	35	17.1569
XIRP2	0	genome.wustl.edu	37	2	168104634	168104634	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	168104634	168104634	T	G	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	silent	c.6732	p.T2244	0.788	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				105	0	0	51	18	26.087
B3GALT1	0	genome.wustl.edu	37	2	168725911	168725911	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	168725911	168725911	A	C	SNP	B3GALT1	ENST00000305861	human	ensembl	74_37	+1	known	missense	c.362	p.N121T	0.988	pfam_Glyco_trans_31	pfam_Glyco_trans_31	-	no_errors	B3GALT1	HGNC	ENSG00000172318				81	0	0	70	16	18.6047
FASTKD1	0	genome.wustl.edu	37	2	170387195	170387195	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	170387195	170387195	A	C	SNP	FASTKD1	ENST00000453153	human	ensembl	74_37	-1	known	missense	c.2344	p.L782V	1.000	pfam_RAP,smart_RAP	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD1	HGNC	ENSG00000138399				77	0	0	87	6	6.45161
SSB	0	genome.wustl.edu	37	2	170657518	170657518	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	170657518	170657518	A	C	SNP	SSB	ENST00000260956	human	ensembl	74_37	+1	known	missense	c.48	p.K16N	1.000	smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_RRM_3,pfam_Lupus_La_RNA-bd,pfam_RRM_dom,smart_Lupus_La_RNA-bd,smart_RRM_dom,pfscan_Lupus_La_RNA-bd,pfscan_RRM_dom,prints_Lupus_La	-	no_errors	SSB	HGNC	ENSG00000138385				80	0	0	70	7	9.09091
AGPS	0	genome.wustl.edu	37	2	178386063	178386063	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	178386063	178386063	T	C	SNP	AGPS	ENST00000264167	human	ensembl	74_37	+1	known	silent	c.1764	p.I588	0.987	pfam_FAD-linked_oxidase_C,superfamily_FAD-linked_Oxase-like_C	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	AGPS	HGNC	ENSG00000018510				92	0	0	89	6	6.31579
OSBPL6	0	genome.wustl.edu	37	2	179257153	179257153	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179257153	179257153	A	C	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.2473	p.N825H	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156				95	0	0	55	16	22.5352
TTN	0	genome.wustl.edu	37	2	179449266	179449266	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179449266	179449266	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.57308	p.V19103A	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				71	0	0	60	12	16.6667
TTN	0	genome.wustl.edu	37	2	179455636	179455636	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179455636	179455636	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.53112	p.P17704	0.998	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				163	0	0	96	38	28.3582
TTN	0	genome.wustl.edu	37	2	179528765	179528765	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179528765	179528765	T	C	SNP	TTN	ENST00000589042	human	ensembl	74_37	-1	putative	missense	c.36341	p.K12114R	0.324	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				117	0	0	107	7	6.14035
TTN	0	genome.wustl.edu	37	2	179576069	179576069	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179576069	179576069	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.24162	p.K8054N	0.995	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				87	0	0	37	14	27.451
TTN	0	genome.wustl.edu	37	2	179577516	179577516	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179577516	179577516	A	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.23504	p.F7835C	0.999	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				57	0	0	62	4	6.06061
TTN	0	genome.wustl.edu	37	2	179577970	179577970	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179577970	179577970	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.23159	p.N7720S	0.883	pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				28	0	0	24	6	20
TTN-AS1	0	genome.wustl.edu	37	2	179578948	179578948	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179578948	179578948	A	C	SNP	TTN-AS1	ENST00000431752	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTN-AS1	HGNC	ENSG00000237298				84	0	0	60	27	31.0345
TTN	0	genome.wustl.edu	37	2	179595420	179595420	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179595420	179595420	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.14108	p.P4703H	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				110	0	0	84	19	18.4466
TTN	0	genome.wustl.edu	37	2	179610355	179610355	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179610355	179610355	T	G	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	missense	c.16772	p.K5591T	0.001	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				101	0	0	92	7	7.07071
TTN	0	genome.wustl.edu	37	2	179639750	179639750	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179639750	179639750	A	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.6688	p.F2230I	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				102	0	0	75	8	9.63855
TTN	0	genome.wustl.edu	37	2	179641097	179641097	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179641097	179641097	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.5494	p.T1832P	0.165	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				154	0	0	104	37	26.2411
CWC22	0	genome.wustl.edu	37	2	180835492	180835492	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	180835492	180835492	T	G	SNP	CWC22	ENST00000295749	human	ensembl	74_37	-1	known	missense	c.1032	p.K344N	1.000	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI	-	no_errors	CWC22	HGNC	ENSG00000163510				71	0	0	75	7	8.53659
SSFA2	0	genome.wustl.edu	37	2	182794355	182794355	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	182794355	182794355	T	G	SNP	SSFA2	ENST00000320370	human	ensembl	74_37	+1	known	missense	c.3743	p.I1248S	0.196	NULL	NULL	-	no_errors	SSFA2	HGNC	ENSG00000138434				153	0	0	100	34	25.3731
ZSWIM2	0	genome.wustl.edu	37	2	187693238	187693238	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	187693238	187693238	T	G	SNP	ZSWIM2	ENST00000295131	human	ensembl	74_37	-1	known	missense	c.1375	p.K459Q	0.008	NULL	pfam_Znf_SWIM,pfam_Znf_ZZ,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Znf_ZZ	-	no_errors	ZSWIM2	HGNC	ENSG00000163012				64	0	0	63	6	8.69565
ANKAR	0	genome.wustl.edu	37	2	190554291	190554291	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	190554291	190554291	A	C	SNP	ANKAR	ENST00000313581	human	ensembl	74_37	+1	known	missense	c.640	p.I214L	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Armadillo,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Armadillo	-	no_errors	ANKAR	HGNC	ENSG00000151687				121	0	0	99	39	28.2609
ANKAR	0	genome.wustl.edu	37	2	190554626	190554626	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	190554626	190554626	T	G	SNP	ANKAR	ENST00000313581	human	ensembl	74_37	+1	known	missense	c.975	p.F325L	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Armadillo,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Armadillo	-	no_errors	ANKAR	HGNC	ENSG00000151687				78	0	0	66	12	15.3846
ANKAR	0	genome.wustl.edu	37	2	190585496	190585496	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	190585496	190585496	T	G	SNP	ANKAR	ENST00000313581	human	ensembl	74_37	+1	known	missense	c.2618	p.F873C	0.993	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Armadillo,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Armadillo	-	no_errors	ANKAR	HGNC	ENSG00000151687				195	0	0	184	24	11.5385
PMS1	0	genome.wustl.edu	37	2	190719033	190719033	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	190719033	190719033	T	C	SNP	PMS1	ENST00000441310	human	ensembl	74_37	+1	known	silent	c.1035	p.S345	1.000	NULL	pfam_DNA_mismatch_repair_C,pfam_HMG_box_dom,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS1	HGNC	ENSG00000064933				75	0	0	66	16	19.5122
PMS1	0	genome.wustl.edu	37	2	190719376	190719376	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	190719376	190719376	A	C	SNP	PMS1	ENST00000441310	human	ensembl	74_37	+1	known	missense	c.1378	p.S460R	0.000	NULL	pfam_DNA_mismatch_repair_C,pfam_HMG_box_dom,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS1	HGNC	ENSG00000064933				95	0	0	89	6	6.31579
SLC39A10	0	genome.wustl.edu	37	2	196545252	196545252	+	Silent	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	196545252	196545252	G	T	SNP	SLC39A10	ENST00000359634	human	ensembl	74_37	+1	known	silent	c.486	p.V162	0.001	NULL	pfam_ZIP	-	no_errors	SLC39A10	HGNC	ENSG00000196950				122	0	0	81	24	22.8571
PGAP1	0	genome.wustl.edu	37	2	197712683	197712683	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	197712683	197712683	T	G	SNP	PGAP1	ENST00000354764	human	ensembl	74_37	-1	known	missense	c.1940	p.K647T	0.999	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121				68	0	0	69	18	20.6897
BOLL	0	genome.wustl.edu	37	2	198641795	198641795	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	198641795	198641795	T	G	SNP	BOLL	ENST00000321801	human	ensembl	74_37	-1	known	missense	c.300	p.K100N	1.000	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	BOLL	HGNC	ENSG00000152430				57	0	0	45	11	19.6429
TRAK2	0	genome.wustl.edu	37	2	202245793	202245793	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	202245793	202245793	T	A	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.2218	p.S740C	0.970	pfam_Traffickng_kinesin-bd_prot_dom	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993				180	0	0	133	24	15.2866
ABI2	0	genome.wustl.edu	37	2	204291994	204291994	+	Splice_Site	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	204291994	204291994	T	G	SNP	ABI2	ENST00000464761	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.999	-	-	-	no_errors	ABI2	HGNC	ENSG00000138443				63	0	0	47	21	30.8824
PUM2	0	genome.wustl.edu	37	2	20508339	20508339	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	20508339	20508339	A	T	SNP	PUM2	ENST00000361078	human	ensembl	74_37	-1	known	silent	c.525	p.T175	1.000	NULL	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	PUM2	HGNC	ENSG00000055917				76	0	0	67	6	8.21918
MDH1B	0	genome.wustl.edu	37	2	207621681	207621681	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	207621681	207621681	T	A	SNP	MDH1B	ENST00000374412	human	ensembl	74_37	-1	known	missense	c.354	p.K118N	0.003	NULL	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C	-	no_errors	MDH1B	HGNC	ENSG00000138400				76	0	0	61	8	11.5942
PIKFYVE	0	genome.wustl.edu	37	2	209179076	209179076	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	209179076	209179076	G	A	SNP	PIKFYVE	ENST00000264380	human	ensembl	74_37	+1	known	silent	c.1755	p.L585	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,pfam_Cpn60/TCP-1,pfam_DEP_dom,pfam_Znf_FYVE,superfamily_GroEL-like_apical_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,smart_DEP_dom,smart_PInositol-4P-5-kinase_core_sub,pfscan_DEP_dom,pfscan_Znf_FYVE-rel	-	no_errors	PIKFYVE	HGNC	ENSG00000115020				66	0	0	73	5	6.41026
APOB	0	genome.wustl.edu	37	2	21228452	21228452	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	21228452	21228452	A	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.11288	p.L3763R	0.984	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				188	0	0	128	56	30.4348
APOB	0	genome.wustl.edu	37	2	21235329	21235329	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	21235329	21235329	A	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.4411	p.L1471V	0.000	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				93	0	0	87	16	15.534
SPAG16	0	genome.wustl.edu	37	2	214794832	214794832	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	214794832	214794832	T	C	SNP	SPAG16	ENST00000331683	human	ensembl	74_37	+1	known	missense	c.1363	p.S455P	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SPAG16	HGNC	ENSG00000144451				87	0	0	57	22	27.8481
TNS1	0	genome.wustl.edu	37	2	218712817	218712817	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	218712817	218712817	T	C	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.2048	p.Q683R	0.998	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				54	0	0	34	5	12.8205
TNS1	0	genome.wustl.edu	37	2	218713280	218713280	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	218713280	218713280	T	C	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.1585	p.S529G	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				76	0	0	68	7	9.33333
CXCR1	0	genome.wustl.edu	37	2	219029780	219029780	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	219029780	219029780	A	C	SNP	CXCR1	ENST00000295683	human	ensembl	74_37	-1	known	missense	c.155	p.L52R	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR1,prints_Chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CXCR1	HGNC	ENSG00000163464				186	0	0	150	17	10.1796
PLCD4	0	genome.wustl.edu	37	2	219483332	219483332	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	219483332	219483332	A	C	SNP	PLCD4	ENST00000417849	human	ensembl	74_37	+1	known	missense	c.212	p.N71T	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD4	HGNC	ENSG00000115556				39	0	0	31	9	22.5
GLB1L	0	genome.wustl.edu	37	2	220101987	220101987	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	220101987	220101987	A	G	SNP	GLB1L	ENST00000295759	human	ensembl	74_37	-1	known	missense	c.1772	p.F591S	0.996	superfamily_Galactose-bd-like	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1L	HGNC	ENSG00000163521				66	0	0	50	6	10.7143
EPHA4	0	genome.wustl.edu	37	2	222428958	222428958	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	222428958	222428958	T	A	SNP	EPHA4	ENST00000281821	human	ensembl	74_37	-1	known	missense	c.316	p.R106W	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA4	HGNC	ENSG00000116106				177	0	0	146	11	7.00637
SCG2	0	genome.wustl.edu	37	2	224463728	224463728	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	224463728	224463728	T	G	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	missense	c.273	p.K91N	0.997	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951				123	0	0	110	6	5.17241
SLC19A3	0	genome.wustl.edu	37	2	228560750	228560750	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	228560750	228560750	G	A	SNP	SLC19A3	ENST00000258403	human	ensembl	74_37	-1	known	missense	c.1027	p.L343F	0.411	pfam_Folate_carrier,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	pfam_Folate_carrier,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	-	no_errors	SLC19A3	HGNC	ENSG00000135917				105	0	0	74	19	20.4301
SPHKAP	0	genome.wustl.edu	37	2	228846499	228846499	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	228846499	228846499	G	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	nonsense	c.5037	p.C1679*	1.000	pfam_AKAP_110_C	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820				76	0	0	75	20	21.0526
SPHKAP	0	genome.wustl.edu	37	2	228881411	228881411	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	228881411	228881411	A	C	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.4159	p.L1387V	0.001	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820				112	0	0	112	10	8.19672
FBXO36	0	genome.wustl.edu	37	2	230861562	230861562	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	230861562	230861562	T	C	SNP	FBXO36	ENST00000283946	human	ensembl	74_37	+1	known	silent	c.301	p.L101	0.024	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO36	HGNC	ENSG00000153832				172	0	0	136	18	11.6883
SLC16A14	0	genome.wustl.edu	37	2	230910769	230910769	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	230910769	230910769	A	C	SNP	SLC16A14	ENST00000295190	human	ensembl	74_37	-1	known	missense	c.1073	p.I358S	0.956	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A14	HGNC	ENSG00000163053				73	0	0	50	12	19.3548
TRAF3IP1	0	genome.wustl.edu	37	2	239234574	239234574	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	239234574	239234574	A	G	SNP	TRAF3IP1	ENST00000373327	human	ensembl	74_37	+1	known	missense	c.317	p.E106G	1.000	NULL	NULL	-	no_errors	TRAF3IP1	HGNC	ENSG00000204104				53	0	0	48	9	15.7895
HDAC4	0	genome.wustl.edu	37	2	240055966	240055966	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	240055966	240055966	C	T	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	silent	c.1269	p.P423	0.609	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				48	0	0	36	3	7.69231
ATAD2B	0	genome.wustl.edu	37	2	24118816	24118816	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	24118816	24118816	T	G	SNP	ATAD2B	ENST00000238789	human	ensembl	74_37	-1	known	missense	c.241	p.S81R	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778				40	0	0	15	12	44.4444
SNED1	0	genome.wustl.edu	37	2	241992724	241992724	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	241992724	241992724	T	G	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	missense	c.2238	p.S746R	0.989	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804				75	0	0	54	20	27.027
DRC1	0	genome.wustl.edu	37	2	26647191	26647191	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	26647191	26647191	A	T	SNP	DRC1	ENST00000288710	human	ensembl	74_37	+1	known	missense	c.409	p.I137F	1.000	NULL	NULL	-	no_errors	DRC1	HGNC	ENSG00000157856				175	0	0	175	22	11.1675
OTOF	0	genome.wustl.edu	37	2	26697508	26697508	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	26697508	26697508	T	G	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.3161	p.K1054T	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				73	0	0	51	6	10.5263
DPYSL5	0	genome.wustl.edu	37	2	27165557	27165557	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	27165557	27165557	A	C	SNP	DPYSL5	ENST00000288699	human	ensembl	74_37	+1	known	missense	c.1379	p.K460T	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851				99	0	0	71	15	17.4419
C2orf16	0	genome.wustl.edu	37	2	27804228	27804228	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	27804228	27804228	A	C	SNP	C2orf16	ENST00000408964	human	ensembl	74_37	+1	known	missense	c.4789	p.N1597H	0.003	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843				176	0	0	138	40	22.4719
C2orf71	0	genome.wustl.edu	37	2	29296021	29296021	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	29296021	29296021	G	A	SNP	C2orf71	ENST00000331664	human	ensembl	74_37	-1	known	silent	c.1107	p.T369	0.969	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270				80	0	0	74	12	13.9535
C2orf71	0	genome.wustl.edu	37	2	29296170	29296170	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	29296170	29296170	G	A	SNP	C2orf71	ENST00000331664	human	ensembl	74_37	-1	known	missense	c.958	p.R320C	0.009	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270				143	0	0	107	29	21.3235
EHD3	0	genome.wustl.edu	37	2	31483561	31483561	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	31483561	31483561	A	C	SNP	EHD3	ENST00000322054	human	ensembl	74_37	+1	known	missense	c.688	p.M230L	1.000	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD3	HGNC	ENSG00000013016				86	0	0	49	9	15.5172
BIRC6	0	genome.wustl.edu	37	2	32828139	32828139	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	32828139	32828139	A	C	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.14059	p.S4687R	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				40	0	0	31	9	22.5
SOS1	0	genome.wustl.edu	37	2	39251221	39251221	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	39251221	39251221	T	A	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	missense	c.1132	p.T378S	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904				52	0	0	50	9	15.2542
PLEKHH2	0	genome.wustl.edu	37	2	43991482	43991482	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	43991482	43991482	T	G	SNP	PLEKHH2	ENST00000282406	human	ensembl	74_37	+1	known	missense	c.4274	p.L1425R	1.000	pfscan_FERM_domain	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH2	HGNC	ENSG00000152527				79	0	0	50	9	15.2542
PREPL	0	genome.wustl.edu	37	2	44571048	44571048	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	44571048	44571048	A	C	SNP	PREPL	ENST00000260648	human	ensembl	74_37	-1	known	missense	c.452	p.L151R	1.000	pfam_Pept_S9A_N	pfam_Peptidase_S9,pfam_Pept_S9A_N,prints_Peptidase_S9A	-	no_errors	PREPL	HGNC	ENSG00000138078				77	0	0	102	9	8.10811
SOCS5	0	genome.wustl.edu	37	2	46985924	46985924	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	46985924	46985924	A	T	SNP	SOCS5	ENST00000306503	human	ensembl	74_37	+1	known	missense	c.255	p.E85D	1.000	NULL	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS5	HGNC	ENSG00000171150				104	0	0	76	7	8.43373
ACYP2	0	genome.wustl.edu	37	2	54531856	54531856	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	54531856	54531856	A	G	SNP	ACYP2	ENST00000394666	human	ensembl	74_37	+1	known	missense	c.217	p.S73G	0.961	pfam_Acylphosphatase-like,superfamily_Acylphosphatase-like,pfscan_Acylphosphatase-like,prints_Acylphosphatase	pfam_Acylphosphatase-like,superfamily_Acylphosphatase-like,pfscan_Acylphosphatase-like,prints_Acylphosphatase	-	no_errors	ACYP2	HGNC	ENSG00000170634				61	0	0	46	9	16.3636
MTIF2	0	genome.wustl.edu	37	2	55476576	55476576	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	55476576	55476576	T	G	SNP	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	missense	c.936	p.E312D	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760				94	0	0	63	30	32.2581
USP34	0	genome.wustl.edu	37	2	61508340	61508340	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	61508340	61508340	T	G	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.5036	p.K1679T	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464				43	0	0	28	6	17.6471
AFTPH	0	genome.wustl.edu	37	2	64778718	64778718	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	64778718	64778718	T	G	SNP	AFTPH	ENST00000422803	human	ensembl	74_37	+1	known	missense	c.110	p.V37G	0.991	NULL	NULL	-	no_errors	AFTPH	HGNC	ENSG00000119844				204	0	0	154	47	23.3831
DYSF	0	genome.wustl.edu	37	2	71828584	71828584	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	71828584	71828584	T	G	SNP	DYSF	ENST00000472873	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DYSF	HGNC	ENSG00000135636				82	0	0	69	17	19.7674
ALMS1	0	genome.wustl.edu	37	2	73650099	73650099	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	73650099	73650099	T	A	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.761	p.L254Q	1.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127				157	0	0	129	24	15.6863
HTRA2	0	genome.wustl.edu	37	2	74757775	74757775	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	74757775	74757775	T	C	SNP	HTRA2	ENST00000258080	human	ensembl	74_37	+1	known	missense	c.538	p.S180P	1.000	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA2	HGNC	ENSG00000115317				78	0	0	58	6	9.375
SEMA4F	0	genome.wustl.edu	37	2	74902419	74902419	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	74902419	74902419	T	A	SNP	SEMA4F	ENST00000357877	human	ensembl	74_37	+1	known	missense	c.1280	p.L427Q	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4F	HGNC	ENSG00000135622				60	0	0	38	5	11.6279
ASAP2	0	genome.wustl.edu	37	2	9498920	9498920	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	9498920	9498920	A	T	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.1363	p.T455S	1.000	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693				292	0	0	246	23	8.55019
CNNM4	0	genome.wustl.edu	37	2	97474441	97474441	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	97474441	97474441	T	G	SNP	CNNM4	ENST00000377075	human	ensembl	74_37	+1	known	missense	c.2092	p.F698V	1.000	superfamily_cNMP-bd-like	pfam_DUF21,pfam_CBS_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNNM4	HGNC	ENSG00000158158				84	0	0	40	26	39.3939
VWA3B	0	genome.wustl.edu	37	2	98809455	98809455	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	98809455	98809455	A	T	SNP	VWA3B	ENST00000477737	human	ensembl	74_37	+1	known	missense	c.1561	p.S521C	0.983	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC	ENSG00000168658				110	0	0	109	6	5.21739
TSGA10	0	genome.wustl.edu	37	2	99681472	99681472	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	99681472	99681472	A	C	SNP	TSGA10	ENST00000355053	human	ensembl	74_37	-1	known	missense	c.1334	p.L445R	1.000	NULL	NULL	-	no_errors	TSGA10	HGNC	ENSG00000135951				90	0	0	75	25	25
SPTLC3	0	genome.wustl.edu	37	20	13140768	13140768	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	13140768	13140768	A	G	SNP	SPTLC3	ENST00000399002	human	ensembl	74_37	+1	known	missense	c.1534	p.M512V	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SPTLC3	HGNC	ENSG00000172296				83	0	0	56	29	34.1176
PCSK2	0	genome.wustl.edu	37	20	17410104	17410104	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	17410104	17410104	A	C	SNP	PCSK2	ENST00000262545	human	ensembl	74_37	+1	known	missense	c.645	p.E215D	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK2	HGNC	ENSG00000125851				195	0	0	208	16	7.14286
RRBP1	0	genome.wustl.edu	37	20	17607995	17607995	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	17607995	17607995	A	G	SNP	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	silent	c.2961	p.T987	0.944	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844				35	0	0	35	5	12.5
SEC23B	0	genome.wustl.edu	37	20	18492909	18492909	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	18492909	18492909	T	C	SNP	SEC23B	ENST00000262544	human	ensembl	74_37	+1	known	missense	c.262	p.C88R	1.000	pfam_Znf_Sec23_Sec24,superfamily_Znf_Sec23_Sec24	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Gelsolin_dom,pfam_Znf_Sec23_Sec24,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC23B	HGNC	ENSG00000101310				29	0	0	45	6	11.7647
SCP2D1	0	genome.wustl.edu	37	20	18794785	18794785	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	18794785	18794785	C	T	SNP	SCP2D1	ENST00000377428	human	ensembl	74_37	+1	known	missense	c.326	p.T109I	0.997	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2D1	HGNC	ENSG00000132631				86	0	0	75	15	16.6667
CRNKL1	0	genome.wustl.edu	37	20	20028462	20028462	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	20028462	20028462	T	G	SNP	CRNKL1	ENST00000377340	human	ensembl	74_37	-1	known	missense	c.1052	p.N351T	1.000	pfam_Suf,smart_HAT	pfam_HAT,pfam_Suf,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	CRNKL1	HGNC	ENSG00000101343				72	0	0	63	14	18.1818
XRN2	0	genome.wustl.edu	37	20	21314715	21314715	+	Splice_Site	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	21314715	21314715	G	A	SNP	XRN2	ENST00000377191	human	ensembl	74_37	+1	known	splice_site	c.1126-1	e13-1	1.000	-	-	-	no_errors	XRN2	HGNC	ENSG00000088930				64	0	0	81	6	6.89655
ZNF343	0	genome.wustl.edu	37	20	2463832	2463832	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	2463832	2463832	A	G	SNP	ZNF343	ENST00000278772	human	ensembl	74_37	-1	known	missense	c.1775	p.L592P	0.005	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF343	HGNC	ENSG00000088876				76	0	0	69	9	11.5385
ACSS1	0	genome.wustl.edu	37	20	24989958	24989958	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	24989958	24989958	T	A	SNP	ACSS1	ENST00000323482	human	ensembl	74_37	-1	known	missense	c.1838	p.K613M	0.106	tigrfam_Ac_CoA_lig	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930				210	0	0	169	24	12.4352
NINL	0	genome.wustl.edu	37	20	25478915	25478915	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	25478915	25478915	A	G	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	missense	c.1100	p.L367P	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				56	0	0	39	9	18.75
NINL	0	genome.wustl.edu	37	20	25478973	25478973	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	25478973	25478973	A	T	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	missense	c.1042	p.F348I	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				28	0	0	36	8	18.1818
DEFB124	0	genome.wustl.edu	37	20	30053417	30053417	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	30053417	30053417	A	C	SNP	DEFB124	ENST00000317676	human	ensembl	74_37	-1	known	silent	c.108	p.T36	0.484	NULL	NULL	-	no_errors	DEFB124	HGNC	ENSG00000180383				98	0	0	116	16	12.1212
ASXL1	0	genome.wustl.edu	37	20	31022897	31022897	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	31022897	31022897	T	G	SNP	ASXL1	ENST00000375687	human	ensembl	74_37	+1	known	silent	c.2382	p.T794	0.009	NULL	NULL	-	no_errors	ASXL1	HGNC	ENSG00000171456				79	0	0	101	19	15.8333
BPIFB6	0	genome.wustl.edu	37	20	31627238	31627238	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	31627238	31627238	A	G	SNP	BPIFB6	ENST00000349552	human	ensembl	74_37	+1	known	missense	c.986	p.K329R	0.999	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB6	HGNC	ENSG00000167104				184	0	0	216	39	15.2941
BPIFB4	0	genome.wustl.edu	37	20	31671658	31671658	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	31671658	31671658	A	C	SNP	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	missense	c.655	p.S219R	0.999	pfam_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191				55	0	0	62	7	10.1449
BPIFA1	0	genome.wustl.edu	37	20	31825526	31825526	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	31825526	31825526	A	C	SNP	BPIFA1	ENST00000354297	human	ensembl	74_37	+1	known	missense	c.9	p.Q3H	0.000	NULL	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	-	no_errors	BPIFA1	HGNC	ENSG00000198183				83	0	0	86	7	7.52688
BPIFA1	0	genome.wustl.edu	37	20	31829261	31829261	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	31829261	31829261	T	G	SNP	BPIFA1	ENST00000354297	human	ensembl	74_37	+1	known	missense	c.652	p.L218V	0.496	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	-	no_errors	BPIFA1	HGNC	ENSG00000198183				231	0	0	259	50	16.1812
C20orf194	0	genome.wustl.edu	37	20	3278685	3278685	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	3278685	3278685	A	C	SNP	C20orf194	ENST00000252032	human	ensembl	74_37	-1	known	missense	c.1920	p.F640L	1.000	NULL	NULL	-	no_errors	C20orf194	HGNC	ENSG00000088854				118	0	0	116	13	10.0775
MMP24	0	genome.wustl.edu	37	20	33859460	33859460	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	33859460	33859460	A	C	SNP	MMP24	ENST00000246186	human	ensembl	74_37	+1	known	missense	c.1422	p.E474D	0.996	pirsf_Pept_M10A_Metazoans,superfamily_Hemopexin-like_dom	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP24	HGNC	ENSG00000125966				29	0	0	14	7	33.3333
CTNNBL1	0	genome.wustl.edu	37	20	36500394	36500394	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	36500394	36500394	G	A	SNP	CTNNBL1	ENST00000405275	human	ensembl	74_37	+1	known	silent	c.1590	p.L530	1.000	NULL	pfam_CTNNBL1_N,superfamily_ARM-type_fold	-	no_errors	CTNNBL1	HGNC	ENSG00000132792				81	0	0	77	9	10.4651
TTI1	0	genome.wustl.edu	37	20	36625208	36625208	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	36625208	36625208	T	C	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	missense	c.2941	p.K981E	1.000	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407				229	0	0	238	48	16.7832
SIGLEC1	0	genome.wustl.edu	37	20	3678698	3678698	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	3678698	3678698	C	T	SNP	SIGLEC1	ENST00000344754	human	ensembl	74_37	-1	known	silent	c.1869	p.L623	0.799	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC1	HGNC	ENSG00000088827				33	0	0	17	3	15
KIAA1755	0	genome.wustl.edu	37	20	36848101	36848101	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	36848101	36848101	A	C	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	silent	c.2487	p.A829	0.001	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633				146	0	0	161	25	13.4409
BPI	0	genome.wustl.edu	37	20	36936031	36936031	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	36936031	36936031	T	A	SNP	BPI	ENST00000262865	human	ensembl	74_37	+1	known	missense	c.205	p.S69T	0.019	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPI	HGNC	ENSG00000101425				114	0	0	130	26	16.6667
PPP1R16B	0	genome.wustl.edu	37	20	37464672	37464672	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	37464672	37464672	A	C	SNP	PPP1R16B	ENST00000299824	human	ensembl	74_37	+1	known	missense	c.104	p.K35T	1.000	superfamily_Ankyrin_rpt-contain_dom,pirsf_Pase-1_reg_su_16AB_euk	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R16B	HGNC	ENSG00000101445				12	0	0	12	6	33.3333
MAFB	0	genome.wustl.edu	37	20	39316595	39316595	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	39316595	39316595	T	C	SNP	MAFB	ENST00000373313	human	ensembl	74_37	-1	known	missense	c.896	p.E299G	1.000	pfam_bZIP_Maf,smart_bZIP,pfscan_bZIP	pfam_bZIP_Maf,pfam_Maf_TF_N,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	MAFB	HGNC	ENSG00000204103				130	0	0	96	23	19.3277
L3MBTL1	0	genome.wustl.edu	37	20	42161533	42161533	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	42161533	42161533	T	G	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	missense	c.1339	p.F447V	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513				97	0	0	120	20	14.2857
KCNS1	0	genome.wustl.edu	37	20	43726484	43726484	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	43726484	43726484	A	C	SNP	KCNS1	ENST00000306117	human	ensembl	74_37	-1	known	missense	c.929	p.I310S	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134				30	0	0	35	7	16.6667
SEMG2	0	genome.wustl.edu	37	20	43851860	43851860	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	43851860	43851860	A	C	SNP	SEMG2	ENST00000372769	human	ensembl	74_37	+1	known	missense	c.1587	p.Q529H	0.000	pfam_Semenogelin	pfam_Semenogelin	-	no_errors	SEMG2	HGNC	ENSG00000124157				84	0	0	95	17	15.1786
NEURL2	0	genome.wustl.edu	37	20	44519175	44519175	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	44519175	44519175	A	C	SNP	NEURL2	ENST00000372518	human	ensembl	74_37	-1	known	missense	c.456	p.F152L	0.886	pfscan_Neu_Z	pfam_Neu_Z,pfam_SOCS_C,smart_Neu_Z,smart_SOCS_C,pfscan_Neu_Z,pfscan_SOCS_C	-	no_errors	NEURL2	HGNC	ENSG00000124257				72	0	0	92	11	10.6796
PLTP	0	genome.wustl.edu	37	20	44527644	44527644	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	44527644	44527644	T	C	SNP	PLTP	ENST00000542937	human	ensembl	74_37	-1	known	missense	c.1478	p.E493G	1.000	NULL	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	PLTP	HGNC	ENSG00000100979				82	0	0	83	10	10.7527
CDH22	0	genome.wustl.edu	37	20	44815501	44815501	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	44815501	44815501	G	A	SNP	CDH22	ENST00000372262	human	ensembl	74_37	-1	known	silent	c.1509	p.Y503	0.976	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,superfamily_MFS_dom_general_subst_transpt,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH22	HGNC	ENSG00000149654				181	0	0	203	42	17.1429
PRND	0	genome.wustl.edu	37	20	4705711	4705711	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	4705711	4705711	T	C	SNP	PRND	ENST00000305817	human	ensembl	74_37	+1	known	missense	c.514	p.W172R	0.024	pfam_Prion/Doppel_prot_b-ribbon_dom	pfam_Prion/Doppel_prot_b-ribbon_dom,pfam_Doppel,superfamily_Prion/Doppel_prot_b-ribbon_dom	-	no_errors	PRND	HGNC	ENSG00000171864				44	0	0	24	6	20
PARD6B	0	genome.wustl.edu	37	20	49366531	49366531	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	49366531	49366531	T	G	SNP	PARD6B	ENST00000371610	human	ensembl	74_37	+1	known	missense	c.625	p.L209V	0.001	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_OPR_PB1,pfam_PDZ,superfamily_PDZ,smart_OPR_PB1,smart_PDZ,pfscan_PDZ	-	no_errors	PARD6B	HGNC	ENSG00000124171				132	1	0.75188	153	13	7.83133
KCNG1	0	genome.wustl.edu	37	20	49621273	49621273	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	49621273	49621273	T	C	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	missense	c.845	p.E282G	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				15	0	0	11	3	21.4286
SALL4	0	genome.wustl.edu	37	20	50407880	50407880	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	50407880	50407880	T	G	SNP	SALL4	ENST00000217086	human	ensembl	74_37	-1	known	missense	c.1142	p.K381T	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL4	HGNC	ENSG00000101115				105	0	0	101	17	14.4068
ZNF217	0	genome.wustl.edu	37	20	52193563	52193563	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	52193563	52193563	A	C	SNP	ZNF217	ENST00000302342	human	ensembl	74_37	-1	known	silent	c.1740	p.P580	0.134	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF217	HGNC	ENSG00000171940				145	0	0	168	43	20.3791
ZNF217	0	genome.wustl.edu	37	20	52199470	52199470	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	52199470	52199470	A	C	SNP	ZNF217	ENST00000540425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ZNF217	HGNC	ENSG00000171940				27	0	0	38	5	11.6279
RTFDC1	0	genome.wustl.edu	37	20	55093316	55093316	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	55093316	55093316	T	G	SNP	RTFDC1	ENST00000357348	human	ensembl	74_37	+1	known	missense	c.1006	p.F336V	1.000	NULL	pfam_Rtf2_RING-finger	-	no_errors	RTFDC1	HGNC	ENSG00000022277				118	0	0	116	9	7.2
BMP7	0	genome.wustl.edu	37	20	55758840	55758840	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	55758840	55758840	C	T	SNP	BMP7	ENST00000395863	human	ensembl	74_37	-1	known	missense	c.896	p.R299H	1.000	NULL	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP7	HGNC	ENSG00000101144				113	0	0	91	23	20.1754
RAE1	0	genome.wustl.edu	37	20	55948568	55948568	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	55948568	55948568	A	C	SNP	RAE1	ENST00000371242	human	ensembl	74_37	+1	known	missense	c.680	p.K227T	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RAE1	HGNC	ENSG00000101146				80	0	0	79	14	15.0538
APCDD1L	0	genome.wustl.edu	37	20	57036043	57036043	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	57036043	57036043	T	C	SNP	APCDD1L	ENST00000439429	human	ensembl	74_37	-1	known	missense	c.1342	p.S448G	1.000	NULL	NULL	-	no_errors	APCDD1L	HGNC	ENSG00000198768				158	0	0	101	8	7.33945
MIR298	0	genome.wustl.edu	37	20	57393330	57393330	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	57393330	57393330	A	C	SNP	MIR298	ENST00000401212	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR298	HGNC	ENSG00000216031				29	0	0	17	10	37.037
TRMT6	0	genome.wustl.edu	37	20	5924813	5924813	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	5924813	5924813	T	G	SNP	TRMT6	ENST00000203001	human	ensembl	74_37	-1	known	missense	c.453	p.K151N	1.000	pfam_EIF3_gamma,pirsf_tRNA_m1A_mtfrase	pfam_EIF3_gamma,pirsf_tRNA_m1A_mtfrase	-	no_errors	TRMT6	HGNC	ENSG00000089195				31	0	0	27	6	18.1818
TAF4	0	genome.wustl.edu	37	20	60575731	60575731	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	60575731	60575731	A	C	SNP	TAF4	ENST00000252996	human	ensembl	74_37	-1	known	missense	c.2533	p.L845V	0.994	pfam_TAF4	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699				131	0	0	127	9	6.61765
LAMA5	0	genome.wustl.edu	37	20	60913663	60913663	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	60913663	60913663	A	C	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.1479	p.N493K	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				13	0	0	16	3	15.7895
GID8	0	genome.wustl.edu	37	20	61576119	61576119	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	61576119	61576119	T	G	SNP	GID8	ENST00000266069	human	ensembl	74_37	+1	known	missense	c.542	p.L181R	0.998	pfam_CTLH/CRA,smart_CRA_dom	pfam_CTLH/CRA,pfam_LisH_dimerisation_subgr,smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	GID8	HGNC	ENSG00000101193				77	0	0	76	8	9.52381
COL20A1	0	genome.wustl.edu	37	20	61938879	61938879	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	20	61938879	61938879	T	C	SNP	COL20A1	ENST00000326996	human	ensembl	74_37	+1	known	silent	c.534	p.A178	0.003	smart_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL20A1	HGNC	ENSG00000101203				52	0	0	44	5	10.2041
TPTE	0	genome.wustl.edu	37	21	10944689	10944689	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	10944689	10944689	T	G	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.545	p.K182T	0.000	pfam_Ion_trans_dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				230	0	0	206	28	11.9658
POTED	0	genome.wustl.edu	37	21	14982737	14982737	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	14982737	14982737	A	T	SNP	POTED	ENST00000299443	human	ensembl	74_37	+1	known	missense	c.188	p.K63M	0.038	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTED	HGNC	ENSG00000166351				23	0	0	10	3	23.0769
NRIP1	0	genome.wustl.edu	37	21	16337791	16337791	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	16337791	16337791	T	C	SNP	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	missense	c.2723	p.E908G	0.996	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530				167	0	0	111	24	17.7778
APP	0	genome.wustl.edu	37	21	27369596	27369596	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	27369596	27369596	A	C	SNP	APP	ENST00000491395	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.174	-	-	-	no_errors	APP	HGNC	ENSG00000142192				31	0	0	29	5	14.7059
GRIK1	0	genome.wustl.edu	37	21	31023581	31023581	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	31023581	31023581	T	C	SNP	GRIK1	ENST00000535441	human	ensembl	74_37	-1	known	missense	c.811	p.R271G	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK1	HGNC	ENSG00000171189				55	0	0	57	11	16.1765
KRTAP19-8	0	genome.wustl.edu	37	21	32410734	32410734	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	32410734	32410734	C	T	SNP	KRTAP19-8	ENST00000382822	human	ensembl	74_37	-1	known	missense	c.29	p.G10D	0.022	pfam_KRTAP_type6/8/16/19/20	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP19-8	HGNC	ENSG00000206102				261	0	0	152	45	22.8426
ENSG00000207098	0	genome.wustl.edu	37	21	34214206	34214206	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	34214206	34214206	A	G	SNP	ENSG00000207098	ENST00000384370	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.167	-	-	-	no_errors	SNORA70	RFAM	ENSG00000207098				54	0	0	35	9	20.4545
LCA5L	0	genome.wustl.edu	37	21	40778399	40778399	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	40778399	40778399	T	G	SNP	LCA5L	ENST00000288350	human	ensembl	74_37	-1	known	missense	c.1422	p.E474D	0.000	NULL	NULL	-	no_errors	LCA5L	HGNC	ENSG00000157578				72	0	0	71	6	7.79221
UMODL1	0	genome.wustl.edu	37	21	43547856	43547856	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	43547856	43547856	T	A	SNP	UMODL1	ENST00000408989	human	ensembl	74_37	+1	known	missense	c.3989	p.I1330N	0.997	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_SEA_dom,pfam_EGF-like_Ca-bd_dom,pfam_EMI_domain,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_EGF-like_Ca-bd_dom,smart_Fibronectin_type3,smart_ZP_dom,pfscan_EG-like_dom,pfscan_EMI_domain,pfscan_Fibronectin_type3,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMODL1	HGNC	ENSG00000177398				59	0	0	42	11	20.7547
PDE9A	0	genome.wustl.edu	37	21	44151886	44151886	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	44151886	44151886	T	G	SNP	PDE9A	ENST00000291539	human	ensembl	74_37	+1	known	missense	c.269	p.V90G	0.002	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE9A	HGNC	ENSG00000160191				111	0	0	77	9	10.4651
TRAPPC10	0	genome.wustl.edu	37	21	45499968	45499968	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	45499968	45499968	G	A	SNP	TRAPPC10	ENST00000291574	human	ensembl	74_37	+1	known	silent	c.1683	p.Q561	0.996	NULL	NULL	-	no_errors	TRAPPC10	HGNC	ENSG00000160218				49	0	0	34	11	24.4444
TRPM2	0	genome.wustl.edu	37	21	45837923	45837923	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	45837923	45837923	T	G	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	missense	c.3260	p.L1087R	1.000	NULL	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				110	0	0	62	9	12.6761
PCNT	0	genome.wustl.edu	37	21	47810619	47810619	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	21	47810619	47810619	A	C	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	missense	c.3875	p.E1292A	1.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				50	0	0	35	15	30
POTEH	0	genome.wustl.edu	37	22	16287707	16287707	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	16287707	16287707	T	G	SNP	POTEH	ENST00000343518	human	ensembl	74_37	-1	known	missense	c.179	p.K60T	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEH	HGNC	ENSG00000198062				517	0	0	359	73	16.8981
CECR2	0	genome.wustl.edu	37	22	18028887	18028887	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	18028887	18028887	G	A	SNP	CECR2	ENST00000400573	human	ensembl	74_37	+1	novel	missense	c.3844	p.A1282T	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954				140	0	0	72	31	30.0971
HIRA	0	genome.wustl.edu	37	22	19363240	19363240	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	19363240	19363240	T	C	SNP	HIRA	ENST00000263208	human	ensembl	74_37	-1	known	silent	c.1689	p.K563	1.000	NULL	pfam_Hira,pfam_WD40_repeat,pfam_HIRA_B_motif,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	HIRA	HGNC	ENSG00000100084				82	0	0	66	10	13.1579
MED15	0	genome.wustl.edu	37	22	20920938	20920938	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	20920938	20920938	A	G	SNP	MED15	ENST00000263205	human	ensembl	74_37	+1	known	missense	c.875	p.Q292R	1.000	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				206	0	0	115	16	12.2137
SLC7A4	0	genome.wustl.edu	37	22	21384460	21384460	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	21384460	21384460	T	G	SNP	SLC7A4	ENST00000382932	human	ensembl	74_37	-1	known	missense	c.1163	p.E388A	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A4	HGNC	ENSG00000099960				41	0	0	27	3	10
BCR	0	genome.wustl.edu	37	22	23615951	23615951	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	23615951	23615951	A	C	SNP	BCR	ENST00000305877	human	ensembl	74_37	+1	known	missense	c.2105	p.K702T	1.000	NULL	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				121	0	0	63	11	14.8649
BCR	0	genome.wustl.edu	37	22	23627247	23627247	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	23627247	23627247	G	A	SNP	BCR	ENST00000305877	human	ensembl	74_37	+1	known	nonsense	c.2265	p.W755*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				45	0	0	35	4	10.2564
RFPL1	0	genome.wustl.edu	37	22	29838005	29838005	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	29838005	29838005	T	C	SNP	RFPL1	ENST00000354373	human	ensembl	74_37	+1	known	missense	c.848	p.F283S	0.005	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL1	HGNC	ENSG00000128250				100	0	0	95	5	5
NEFH	0	genome.wustl.edu	37	22	29885569	29885569	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	29885569	29885569	A	C	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	missense	c.1940	p.K647T	0.857	pfam_DUF1388	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285				176	0	0	122	11	8.27068
NEFH	0	genome.wustl.edu	37	22	29886668	29886668	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	29886668	29886668	A	G	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	silent	c.3039	p.E1013	0.956	NULL	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285				52	0	0	38	7	15.5556
CCDC157	0	genome.wustl.edu	37	22	30772518	30772518	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	30772518	30772518	A	T	SNP	CCDC157	ENST00000338306	human	ensembl	74_37	+1	known	silent	c.2043	p.P681	0.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC157	HGNC	ENSG00000187860				247	1	0.403226	84	91	52
SH3BP1	0	genome.wustl.edu	37	22	38061576	38061576	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	38061576	38061576	G	T	SNP	SH3BP1	ENST00000599616	human	ensembl	74_37	+1	known	missense	c.1516	p.A506S	0.900	superfamily_HAD-like_dom	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,superfamily_HAD-like_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092				57	0	0	42	4	8.69565
MIEF1	0	genome.wustl.edu	37	22	39908397	39908397	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	39908397	39908397	T	C	SNP	MIEF1	ENST00000428069	human	ensembl	74_37	+1	known	missense	c.397	p.C133R	0.335	NULL	NULL	-	no_errors	MIEF1	HGNC	ENSG00000100335				87	0	0	72	7	8.86076
TCF20	0	genome.wustl.edu	37	22	42609755	42609755	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	42609755	42609755	T	C	SNP	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	silent	c.1557	p.L519	0.668	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207				315	0	0	207	34	14.1079
CELSR1	0	genome.wustl.edu	37	22	46860029	46860029	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	46860029	46860029	A	C	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.3758	p.V1253G	0.993	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				67	0	0	26	32	55.1724
PPP6R2	0	genome.wustl.edu	37	22	50857310	50857310	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	22	50857310	50857310	T	A	SNP	PPP6R2	ENST00000216061	human	ensembl	74_37	+1	known	silent	c.633	p.A211	0.249	pfam_SAPS,superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R2	HGNC	ENSG00000100239				140	0	0	94	35	27.1318
ABI3BP	0	genome.wustl.edu	37	3	100595371	100595371	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	100595371	100595371	T	G	SNP	ABI3BP	ENST00000284322	human	ensembl	74_37	-1	known	missense	c.751	p.T251P	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ABI3BP	HGNC	ENSG00000154175				48	0	0	31	12	27.907
IMPG2	0	genome.wustl.edu	37	3	100963575	100963575	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	100963575	100963575	T	A	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.1600	p.S534C	0.974	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148				84	0	0	67	10	12.987
IRAK2	0	genome.wustl.edu	37	3	10255072	10255072	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	10255072	10255072	A	C	SNP	IRAK2	ENST00000256458	human	ensembl	74_37	+1	known	missense	c.710	p.K237T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IRAK2	HGNC	ENSG00000134070				90	0	0	54	15	21.7391
CBLB	0	genome.wustl.edu	37	3	105378018	105378018	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	105378018	105378018	T	A	SNP	CBLB	ENST00000264122	human	ensembl	74_37	-1	known	silent	c.2745	p.P915	0.767	superfamily_UBA-like	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBLB	HGNC	ENSG00000114423				86	0	0	71	18	20.2247
CCDC54	0	genome.wustl.edu	37	3	107097406	107097406	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	107097406	107097406	A	C	SNP	CCDC54	ENST00000261058	human	ensembl	74_37	+1	known	missense	c.972	p.E324D	1.000	NULL	NULL	-	no_errors	CCDC54	HGNC	ENSG00000138483				61	0	0	48	14	22.5806
KIAA2018	0	genome.wustl.edu	37	3	113375311	113375311	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	113375311	113375311	T	G	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.5218	p.S1740R	0.677	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				142	0	0	117	24	17.0213
IGSF11	0	genome.wustl.edu	37	3	118645003	118645003	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	118645003	118645003	A	C	SNP	IGSF11	ENST00000393775	human	ensembl	74_37	-1	known	silent	c.525	p.T175	0.995	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF11	HGNC	ENSG00000144847				94	0	0	90	18	16.6667
B4GALT4	0	genome.wustl.edu	37	3	118948756	118948756	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	118948756	118948756	G	A	SNP	B4GALT4	ENST00000359213	human	ensembl	74_37	-1	known	missense	c.191	p.T64I	0.005	NULL	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT4	HGNC	ENSG00000121578				92	0	0	69	24	25.8065
MAATS1	0	genome.wustl.edu	37	3	119426380	119426380	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	119426380	119426380	C	T	SNP	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	missense	c.331	p.H111Y	0.018	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833				67	0	0	57	5	8.06452
POLQ	0	genome.wustl.edu	37	3	121238762	121238762	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	121238762	121238762	T	A	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	missense	c.1424	p.K475M	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341				252	0	0	240	33	12.0879
FBXO40	0	genome.wustl.edu	37	3	121340935	121340935	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	121340935	121340935	A	C	SNP	FBXO40	ENST00000338040	human	ensembl	74_37	+1	known	missense	c.659	p.N220T	0.998	NULL	superfamily_F-box_dom,superfamily_TRAF-like,pfscan_F-box_dom,pfscan_Znf_TRAF	-	no_errors	FBXO40	HGNC	ENSG00000163833				60	0	0	71	20	21.978
HCLS1	0	genome.wustl.edu	37	3	121376066	121376066	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	121376066	121376066	A	G	SNP	HCLS1	ENST00000468693	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HCLS1	HGNC	ENSG00000180353				186	0	0	165	20	10.8108
GOLGB1	0	genome.wustl.edu	37	3	121414777	121414777	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	121414777	121414777	T	G	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.4578	p.Q1526H	0.949	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				183	0	0	179	58	24.4726
GOLGB1	0	genome.wustl.edu	37	3	121415485	121415485	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	121415485	121415485	A	G	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	silent	c.3870	p.S1290	0.000	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				90	0	0	70	10	12.5
EAF2	0	genome.wustl.edu	37	3	121573582	121573582	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	121573582	121573582	T	C	SNP	EAF2	ENST00000273668	human	ensembl	74_37	+1	known	silent	c.250	p.L84	1.000	pfam_Tscrpt_elong_fac_Eaf_N	pfam_Tscrpt_elong_fac_Eaf_N	-	no_errors	EAF2	HGNC	ENSG00000145088				79	0	0	78	5	6.0241
CCDC58	0	genome.wustl.edu	37	3	122090532	122090532	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	122090532	122090532	A	C	SNP	CCDC58	ENST00000291458	human	ensembl	74_37	-1	known	missense	c.167	p.L56R	1.000	pfam_Caffeine_induced_death_Cid2	pfam_Caffeine_induced_death_Cid2	-	no_errors	CCDC58	HGNC	ENSG00000160124				114	0	0	109	7	6.03448
PARP14	0	genome.wustl.edu	37	3	122418264	122418264	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	122418264	122418264	T	C	SNP	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	missense	c.863	p.L288P	0.282	NULL	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193				49	0	0	23	30	56.6038
PARP14	0	genome.wustl.edu	37	3	122418777	122418777	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	122418777	122418777	A	C	SNP	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	missense	c.1376	p.K459T	0.001	NULL	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193				45	0	0	43	16	27.1186
ALDH1L1	0	genome.wustl.edu	37	3	125854444	125854444	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	125854444	125854444	T	G	SNP	ALDH1L1	ENST00000393434	human	ensembl	74_37	-1	known	missense	c.1406	p.K469T	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908				71	0	0	63	13	17.1053
KIAA1257	0	genome.wustl.edu	37	3	128706568	128706568	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	128706568	128706568	T	C	SNP	KIAA1257	ENST00000265068	human	ensembl	74_37	-1	known	silent	c.558	p.K186	0.998	NULL	NULL	-	no_errors	KIAA1257	HGNC	ENSG00000114656				63	0	0	67	12	15.1899
IFT122	0	genome.wustl.edu	37	3	129195557	129195557	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	129195557	129195557	A	G	SNP	IFT122	ENST00000296266	human	ensembl	74_37	+1	known	missense	c.1213	p.T405A	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT122	HGNC	ENSG00000163913				119	0	0	94	26	21.6667
IFT122	0	genome.wustl.edu	37	3	129233240	129233240	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	129233240	129233240	T	A	SNP	IFT122	ENST00000296266	human	ensembl	74_37	+1	known	missense	c.3149	p.L1050H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT122	HGNC	ENSG00000163913				63	0	0	46	10	17.8571
TMCC1	0	genome.wustl.edu	37	3	129389315	129389315	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	129389315	129389315	A	T	SNP	TMCC1	ENST00000393238	human	ensembl	74_37	-1	known	missense	c.1369	p.S457T	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2	-	no_errors	TMCC1	HGNC	ENSG00000172765				115	0	0	101	14	12.1739
COL6A6	0	genome.wustl.edu	37	3	130286941	130286941	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	130286941	130286941	A	C	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	missense	c.1894	p.S632R	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384				85	0	0	49	37	43.0233
ACAD11	0	genome.wustl.edu	37	3	132345663	132345663	+	Splice_Site	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	132345663	132345663	T	G	SNP	ACAD11	ENST00000264990	human	ensembl	74_37	-1	known	splice_site	c.1071-2	e9-2	0.990	-	-	-	no_errors	ACAD11	HGNC	ENSG00000240303				41	0	0	51	4	7.27273
TOPBP1	0	genome.wustl.edu	37	3	133339089	133339089	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	133339089	133339089	A	G	SNP	TOPBP1	ENST00000260810	human	ensembl	74_37	-1	known	missense	c.3281	p.L1094P	0.967	NULL	pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_Secretoglobin,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TOPBP1	HGNC	ENSG00000163781				67	0	0	65	11	14.4737
RAB6B	0	genome.wustl.edu	37	3	133557075	133557075	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	133557075	133557075	G	A	SNP	RAB6B	ENST00000285208	human	ensembl	74_37	-1	known	missense	c.430	p.R144C	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB6B	HGNC	ENSG00000154917				166	1	0.598802	147	47	24.2268
NUP210	0	genome.wustl.edu	37	3	13427890	13427890	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	13427890	13427890	T	G	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.702	p.E234D	0.985	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182				119	0	0	74	27	26.7327
ARMC8	0	genome.wustl.edu	37	3	137942279	137942279	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	137942279	137942279	T	G	SNP	ARMC8	ENST00000469044	human	ensembl	74_37	+1	known	silent	c.243	p.T81	0.470	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC8	HGNC	ENSG00000114098				92	0	0	77	21	21.4286
TRIM42	0	genome.wustl.edu	37	3	140407025	140407025	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	140407025	140407025	G	A	SNP	TRIM42	ENST00000286349	human	ensembl	74_37	+1	known	missense	c.1501	p.G501R	0.793	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Znf_B-box,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM42	HGNC	ENSG00000155890				79	0	0	101	6	5.60748
XRN1	0	genome.wustl.edu	37	3	142103387	142103387	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	142103387	142103387	A	C	SNP	XRN1	ENST00000264951	human	ensembl	74_37	-1	known	missense	c.2480	p.F827C	1.000	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127				91	0	0	86	27	23.8938
ATR	0	genome.wustl.edu	37	3	142231116	142231116	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	142231116	142231116	T	G	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	missense	c.4838	p.K1613T	0.144	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054				93	0	0	80	7	8.04598
SLC9A9	0	genome.wustl.edu	37	3	143214209	143214209	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	143214209	143214209	T	C	SNP	SLC9A9	ENST00000316549	human	ensembl	74_37	-1	known	missense	c.1171	p.I391V	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A9	HGNC	ENSG00000181804				104	0	0	127	21	14.1892
PLOD2	0	genome.wustl.edu	37	3	145790437	145790437	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	145790437	145790437	A	C	SNP	PLOD2	ENST00000282903	human	ensembl	74_37	-1	known	missense	c.1759	p.F587V	1.000	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD2	HGNC	ENSG00000152952				48	0	0	58	9	13.4328
C3orf20	0	genome.wustl.edu	37	3	14731604	14731604	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	14731604	14731604	A	C	SNP	C3orf20	ENST00000253697	human	ensembl	74_37	+1	known	missense	c.726	p.K242N	0.010	NULL	NULL	-	no_errors	C3orf20	HGNC	ENSG00000131379				70	0	0	76	6	7.31707
ZFYVE20	0	genome.wustl.edu	37	3	15116058	15116058	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	15116058	15116058	T	G	SNP	ZFYVE20	ENST00000253699	human	ensembl	74_37	-1	known	missense	c.1586	p.E529A	0.993	NULL	pfam_Rbsn,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	ZFYVE20	HGNC	ENSG00000131381				182	0	0	120	33	21.5686
IGSF10	0	genome.wustl.edu	37	3	151165878	151165878	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	151165878	151165878	T	G	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	silent	c.1891	p.R631	0.964	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				101	0	0	116	11	8.66142
TIPARP	0	genome.wustl.edu	37	3	156413677	156413677	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	156413677	156413677	A	C	SNP	TIPARP	ENST00000295924	human	ensembl	74_37	+1	known	missense	c.1110	p.E370D	1.000	pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	TIPARP	HGNC	ENSG00000163659				99	0	0	85	11	11.4583
IL12A	0	genome.wustl.edu	37	3	159713282	159713282	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	159713282	159713282	T	G	SNP	IL12A	ENST00000305579	human	ensembl	74_37	+1	known	missense	c.698	p.L233R	1.000	pfam_IL-12_alpha,superfamily_4_helix_cytokine-like_core	pfam_IL-12_alpha,superfamily_4_helix_cytokine-like_core	-	no_errors	IL12A	HGNC	ENSG00000168811				133	0	0	107	30	21.8978
BCHE	0	genome.wustl.edu	37	3	165548648	165548648	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	165548648	165548648	T	G	SNP	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	silent	c.174	p.G58	0.671	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200				87	0	0	85	6	6.59341
SERPINI1	0	genome.wustl.edu	37	3	167510376	167510376	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	167510376	167510376	A	G	SNP	SERPINI1	ENST00000295777	human	ensembl	74_37	+1	known	splice_site	c.482-2	e3-2	0.974	-	-	-	no_errors	SERPINI1	HGNC	ENSG00000163536				48	0	0	57	8	12.3077
LRRC31	0	genome.wustl.edu	37	3	169578490	169578490	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	169578490	169578490	A	G	SNP	LRRC31	ENST00000316428	human	ensembl	74_37	-1	known	silent	c.346	p.L116	0.996	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC31	HGNC	ENSG00000114248				104	0	0	85	10	10.5263
SLC7A14	0	genome.wustl.edu	37	3	170201299	170201299	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	170201299	170201299	A	C	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.919	p.L307V	0.719	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293				97	0	0	111	13	10.4839
TNIK	0	genome.wustl.edu	37	3	170797363	170797363	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	170797363	170797363	T	C	SNP	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	missense	c.3392	p.K1131R	1.000	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310				42	0	0	22	11	33.3333
ECT2	0	genome.wustl.edu	37	3	172533486	172533486	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	172533486	172533486	A	C	SNP	ECT2	ENST00000427830	human	ensembl	74_37	+1	known	missense	c.2400	p.K800N	1.000	NULL	pfam_DH-domain,pfam_BRCT_dom,superfamily_DH-domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DH-domain,pfscan_BRCT_dom,pfscan_DH-domain	-	no_errors	ECT2	HGNC	ENSG00000114346				67	0	0	68	10	12.8205
SPATA16	0	genome.wustl.edu	37	3	172607480	172607480	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	172607480	172607480	A	C	SNP	SPATA16	ENST00000351008	human	ensembl	74_37	-1	known	silent	c.1590	p.V530	1.000	NULL	NULL	-	no_errors	SPATA16	HGNC	ENSG00000144962				60	0	0	67	5	6.94444
SPATA16	0	genome.wustl.edu	37	3	172835109	172835109	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	172835109	172835109	T	G	SNP	SPATA16	ENST00000351008	human	ensembl	74_37	-1	known	missense	c.413	p.E138A	1.000	NULL	NULL	-	no_errors	SPATA16	HGNC	ENSG00000144962				137	0	0	107	26	19.5489
PIK3CA	0	genome.wustl.edu	37	3	178941911	178941911	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	178941911	178941911	T	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.2230	p.F744I	1.000	superfamily_Kinase-like_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				106	0	0	58	57	49.5652
PEX5L	0	genome.wustl.edu	37	3	179525470	179525470	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	179525470	179525470	G	A	SNP	PEX5L	ENST00000467460	human	ensembl	74_37	-1	known	silent	c.1668	p.G556	0.439	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PEX5L	HGNC	ENSG00000114757				220	0	0	141	88	38.4279
MCCC1	0	genome.wustl.edu	37	3	182755192	182755192	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	182755192	182755192	A	G	SNP	MCCC1	ENST00000265594	human	ensembl	74_37	-1	known	silent	c.1408	p.L470	0.997	pfam_Biotin_COase_C,superfamily_Rudment_hybrid_motif,smart_Biotin_COase_C,pfscan_Biotin_carboxylation_dom	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_DUF201-type,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_Biotin_lipoyl	-	no_errors	MCCC1	HGNC	ENSG00000078070				47	0	0	48	4	7.69231
ABCC5	0	genome.wustl.edu	37	3	183669329	183669329	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	183669329	183669329	A	G	SNP	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	silent	c.2844	p.H948	0.998	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				93	0	0	101	28	21.7054
EPHB3	0	genome.wustl.edu	37	3	184294690	184294690	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	184294690	184294690	A	C	SNP	EPHB3	ENST00000330394	human	ensembl	74_37	+1	known	missense	c.1073	p.E358A	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB3	HGNC	ENSG00000182580				141	0	0	136	12	8.10811
EPHB3	0	genome.wustl.edu	37	3	184297675	184297675	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	184297675	184297675	A	C	SNP	EPHB3	ENST00000330394	human	ensembl	74_37	+1	known	missense	c.2125	p.I709L	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB3	HGNC	ENSG00000182580				124	0	0	99	28	22.0472
ETV5	0	genome.wustl.edu	37	3	185766624	185766624	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	185766624	185766624	T	G	SNP	ETV5	ENST00000537818	human	ensembl	74_37	-1	known	missense	c.1463	p.K488T	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV5	HGNC	ENSG00000244405				35	0	0	51	6	10.5263
DNAJB11	0	genome.wustl.edu	37	3	186290034	186290034	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	186290034	186290034	T	G	SNP	DNAJB11	ENST00000265028	human	ensembl	74_37	+1	known	silent	c.219	p.A73	1.000	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB11	HGNC	ENSG00000090520				48	0	0	42	14	25
TMEM207	0	genome.wustl.edu	37	3	190167579	190167579	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	190167579	190167579	A	G	SNP	TMEM207	ENST00000354905	human	ensembl	74_37	-1	known	missense	c.20	p.F7S	0.012	NULL	NULL	-	no_errors	TMEM207	HGNC	ENSG00000198398				72	0	0	67	6	8.21918
ZDHHC19	0	genome.wustl.edu	37	3	195937536	195937536	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	195937536	195937536	G	A	SNP	ZDHHC19	ENST00000296326	human	ensembl	74_37	-1	known	silent	c.219	p.F73	0.994	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC19	HGNC	ENSG00000163958				50	0	0	30	27	47.3684
KAT2B	0	genome.wustl.edu	37	3	20187855	20187855	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	20187855	20187855	T	G	SNP	KAT2B	ENST00000263754	human	ensembl	74_37	+1	known	silent	c.2052	p.V684	0.985	pirsf_Hist_acetylase_PCAF	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom	-	no_errors	KAT2B	HGNC	ENSG00000114166				177	0	0	147	18	10.9091
NEK10	0	genome.wustl.edu	37	3	27297800	27297800	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	27297800	27297800	T	G	SNP	NEK10	ENST00000341435	human	ensembl	74_37	-1	known	missense	c.2077	p.I693L	0.990	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NEK10	HGNC	ENSG00000163491				41	0	0	25	7	21.875
CNTN4	0	genome.wustl.edu	37	3	2787211	2787211	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	2787211	2787211	A	C	SNP	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	missense	c.188	p.K63T	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619				121	0	0	89	31	25.8333
OSBPL10	0	genome.wustl.edu	37	3	31725256	31725256	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	31725256	31725256	T	G	SNP	OSBPL10	ENST00000396556	human	ensembl	74_37	-1	known	missense	c.1596	p.Q532H	0.952	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL10	HGNC	ENSG00000144645				150	0	0	108	13	10.7438
TRIM71	0	genome.wustl.edu	37	3	32860404	32860404	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	32860404	32860404	T	A	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	missense	c.832	p.C278S	1.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557				138	0	0	78	26	25
CLASP2	0	genome.wustl.edu	37	3	33648173	33648173	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	33648173	33648173	T	C	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	missense	c.1604	p.K535R	1.000	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539				86	0	0	66	31	31.9588
GOLGA4	0	genome.wustl.edu	37	3	37368464	37368464	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	37368464	37368464	A	C	SNP	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	missense	c.5087	p.K1696T	0.001	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674				152	0	0	139	26	15.7576
XYLB	0	genome.wustl.edu	37	3	38454461	38454461	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	38454461	38454461	T	C	SNP	XYLB	ENST00000207870	human	ensembl	74_37	+1	known	missense	c.1568	p.L523P	0.057	NULL	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N	-	no_errors	XYLB	HGNC	ENSG00000093217				100	0	0	65	20	23.5294
SCN10A	0	genome.wustl.edu	37	3	38835305	38835305	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	38835305	38835305	A	G	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.197	p.F66S	0.997	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				164	0	0	144	14	8.86076
SCN11A	0	genome.wustl.edu	37	3	38926878	38926878	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	38926878	38926878	T	A	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.2965	p.S989C	0.143	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				67	0	0	60	9	13.0435
SCN11A	0	genome.wustl.edu	37	3	38936103	38936103	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	38936103	38936103	A	C	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.2756	p.L919R	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				158	1	0.628931	124	50	28.7356
SCN11A	0	genome.wustl.edu	37	3	38968335	38968335	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	38968335	38968335	T	A	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	silent	c.576	p.R192	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				152	1	0.653595	101	41	28.8732
RPSA	0	genome.wustl.edu	37	3	39452321	39452321	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	39452321	39452321	A	T	SNP	RPSA	ENST00000301821	human	ensembl	74_37	+1	known	missense	c.329	p.N110I	1.000	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2,tigrfam_Ribosomal_S2_euk/arc	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2,tigrfam_Ribosomal_S2_euk/arc	-	no_errors	RPSA	HGNC	ENSG00000168028				56	0	0	54	7	11.4754
ZNF621	0	genome.wustl.edu	37	3	40574022	40574022	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	40574022	40574022	A	G	SNP	ZNF621	ENST00000339296	human	ensembl	74_37	+1	known	missense	c.761	p.Q254R	0.809	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF621	HGNC	ENSG00000172888				72	0	0	62	6	8.82353
CTNNB1	0	genome.wustl.edu	37	3	41266097	41266097	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	41266097	41266097	G	C	SNP	CTNNB1	ENST00000349496	human	ensembl	74_37	+1	known	missense	c.94	p.D32H	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	CTNNB1	HGNC	ENSG00000168036				59	0	0	29	12	29.2683
CCDC13-AS1	0	genome.wustl.edu	37	3	42787595	42787595	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	42787595	42787595	A	C	SNP	CCDC13-AS1	ENST00000418161	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CCDC13-AS1	HGNC	ENSG00000173811				22	0	0	16	10	38.4615
ZNF662	0	genome.wustl.edu	37	3	42956217	42956217	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	42956217	42956217	A	C	SNP	ZNF662	ENST00000328199	human	ensembl	74_37	+1	known	missense	c.730	p.K244Q	0.981	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF662	HGNC	ENSG00000182983				131	0	0	121	17	12.3188
ZNF501	0	genome.wustl.edu	37	3	44776252	44776252	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	44776252	44776252	A	C	SNP	ZNF501	ENST00000396048	human	ensembl	74_37	+1	known	missense	c.339	p.K113N	0.190	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF501	HGNC	ENSG00000186446				98	0	0	71	26	26.8041
LARS2	0	genome.wustl.edu	37	3	45557745	45557745	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	45557745	45557745	A	C	SNP	LARS2	ENST00000265537	human	ensembl	74_37	+1	known	missense	c.2021	p.K674T	1.000	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Leu-tRNA-ligase_bac/mito	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Leu-tRNA-ligase_bac/mito,tigrfam_Leu-tRNA-ligase_bac/mito	-	no_errors	LARS2	HGNC	ENSG00000011376				195	0	0	115	11	8.73016
SLC6A20	0	genome.wustl.edu	37	3	45811859	45811859	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	45811859	45811859	T	A	SNP	SLC6A20	ENST00000358525	human	ensembl	74_37	-1	known	missense	c.940	p.S314C	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A20	HGNC	ENSG00000163817				55	0	0	45	7	13.4615
SETD2	0	genome.wustl.edu	37	3	47142946	47142946	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	47142946	47142946	A	G	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	splice_site	c.5015+2	e8+2	1.000	-	-	-	no_errors	SETD2	HGNC	ENSG00000181555				192	0	0	144	46	24.2105
DHX30	0	genome.wustl.edu	37	3	47890551	47890551	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	47890551	47890551	A	T	SNP	DHX30	ENST00000445061	human	ensembl	74_37	+1	known	missense	c.2911	p.S971C	1.000	NULL	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153				125	0	0	87	11	11.2245
CELSR3	0	genome.wustl.edu	37	3	48699754	48699754	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	48699754	48699754	G	A	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.314	p.P105L	0.019	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				251	0	0	130	40	23.5294
NCKIPSD	0	genome.wustl.edu	37	3	48717555	48717555	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	48717555	48717555	A	C	SNP	NCKIPSD	ENST00000294129	human	ensembl	74_37	-1	known	missense	c.1200	p.S400R	1.000	NULL	pfam_DUF2013,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NCKIPSD	HGNC	ENSG00000213672				92	0	0	45	16	26.2295
MST1R	0	genome.wustl.edu	37	3	49940444	49940444	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	49940444	49940444	G	C	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	missense	c.599	p.A200G	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078				44	0	0	36	15	29.4118
HEMK1	0	genome.wustl.edu	37	3	50608706	50608706	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	50608706	50608706	C	T	SNP	HEMK1	ENST00000232854	human	ensembl	74_37	+1	known	silent	c.171	p.I57	0.995	NULL	pfam_Small_mtfrase_dom,pfam_RNA_methylase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_RNA_MeTrfase_RsmD,pfam_Methyltransf_11,prints_D21N6_MeTrfase,tigrfam_Release_fac_Glu-N5_MeTfrase,tigrfam_Modification_methylase_HemK	-	no_errors	HEMK1	HGNC	ENSG00000114735				90	0	0	57	9	13.6364
RAD54L2	0	genome.wustl.edu	37	3	51671359	51671359	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	51671359	51671359	T	C	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.1522	p.F508L	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080				27	0	0	28	7	20
RAD54L2	0	genome.wustl.edu	37	3	51697390	51697390	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	51697390	51697390	A	C	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.4358	p.D1453A	0.997	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080				59	0	0	48	9	15.7895
RRP9	0	genome.wustl.edu	37	3	51969429	51969429	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	51969429	51969429	A	G	SNP	RRP9	ENST00000232888	human	ensembl	74_37	-1	known	silent	c.900	p.A300	0.013	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RRP9	HGNC	ENSG00000114767				52	0	0	46	4	8
BAP1	0	genome.wustl.edu	37	3	52437539	52437539	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	52437539	52437539	A	C	SNP	BAP1	ENST00000460680	human	ensembl	74_37	-1	known	missense	c.1622	p.V541G	1.000	NULL	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	BAP1	HGNC	ENSG00000163930				87	0	0	53	13	19.697
EDEM1	0	genome.wustl.edu	37	3	5246886	5246886	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	5246886	5246886	A	C	SNP	EDEM1	ENST00000256497	human	ensembl	74_37	+1	known	missense	c.1177	p.N393H	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM1	HGNC	ENSG00000134109				97	0	0	71	26	26.8041
PBRM1	0	genome.wustl.edu	37	3	52620677	52620677	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	52620677	52620677	A	C	SNP	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	missense	c.3151	p.F1051V	1.000	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939				105	0	0	49	21	30
TKT	0	genome.wustl.edu	37	3	53274289	53274289	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	53274289	53274289	C	T	SNP	TKT	ENST00000423525	human	ensembl	74_37	-1	known	missense	c.415	p.G139S	1.000	pfam_Transketolase_N,pfam_DH_E1	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKT	HGNC	ENSG00000163931				105	0	0	60	13	17.8082
PXK	0	genome.wustl.edu	37	3	58377558	58377558	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	58377558	58377558	T	G	SNP	PXK	ENST00000356151	human	ensembl	74_37	+1	known	missense	c.599	p.L200R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	pfam_Phox,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_dom	-	no_errors	PXK	HGNC	ENSG00000168297				101	0	0	87	14	13.8614
ACOX2	0	genome.wustl.edu	37	3	58519189	58519189	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	58519189	58519189	T	A	SNP	ACOX2	ENST00000302819	human	ensembl	74_37	-1	known	missense	c.566	p.K189I	1.000	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX2	HGNC	ENSG00000168306				138	0	0	90	5	5.26316
TMF1	0	genome.wustl.edu	37	3	69096977	69096977	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	69096977	69096977	A	C	SNP	TMF1	ENST00000543976	human	ensembl	74_37	-1	known	missense	c.879	p.F293L	0.999	NULL	pfam_TMF_TATA-bd,pfam_TMF_DNA-bd	-	no_errors	TMF1	HGNC	ENSG00000144747				75	0	0	57	5	8.06452
CNTN3	0	genome.wustl.edu	37	3	74418407	74418407	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	74418407	74418407	A	C	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	silent	c.879	p.G293	0.203	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805				57	0	0	40	12	23.0769
ROBO1	0	genome.wustl.edu	37	3	78655933	78655933	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	78655933	78655933	T	C	SNP	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	missense	c.4694	p.N1565S	0.985	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855				565	0	0	395	139	26.03
ROBO1	0	genome.wustl.edu	37	3	78735060	78735060	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	78735060	78735060	A	C	SNP	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	missense	c.1178	p.L393R	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855				12	0	0	5	7	58.3333
CADM2	0	genome.wustl.edu	37	3	86028312	86028312	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	86028312	86028312	A	G	SNP	CADM2	ENST00000405615	human	ensembl	74_37	+1	known	splice_site	c.950-2	e8-2	1.000	-	-	-	no_errors	CADM2	HGNC	ENSG00000175161				261	0	0	170	56	24.7788
EPHA3	0	genome.wustl.edu	37	3	89176368	89176368	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	89176368	89176368	T	G	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.98	p.L33R	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				60	0	0	54	18	25
ARL13B	0	genome.wustl.edu	37	3	93761872	93761872	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	93761872	93761872	T	C	SNP	ARL13B	ENST00000394222	human	ensembl	74_37	+1	known	missense	c.812	p.L271P	1.000	NULL	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL13B	HGNC	ENSG00000169379				38	0	0	21	9	30
CRYBG3	0	genome.wustl.edu	37	3	97596378	97596378	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	97596378	97596378	A	T	SNP	CRYBG3	ENST00000182096	human	ensembl	74_37	+1	known	nonsense	c.496	p.R166*	0.976	NULL	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBG3	HGNC	ENSG00000080200				89	0	0	83	29	25.8929
OR5H6	0	genome.wustl.edu	37	3	97983357	97983357	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	97983357	97983357	T	G	SNP	OR5H6	ENST00000383696	human	ensembl	74_37	+1	known	missense	c.229	p.L77V	0.130	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H6	HGNC	ENSG00000230301				313	0	0	227	84	27.0096
IL17RC	0	genome.wustl.edu	37	3	9975191	9975191	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	3	9975191	9975191	G	A	SNP	IL17RC	ENST00000295981	human	ensembl	74_37	+1	known	missense	c.2290	p.D764N	0.999	NULL	pfam_SEFIR	-	no_errors	IL17RC	HGNC	ENSG00000163702				19	0	0	8	5	38.4615
ADH1B	0	genome.wustl.edu	37	4	100232006	100232006	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	100232006	100232006	T	G	SNP	ADH1B	ENST00000305046	human	ensembl	74_37	-1	known	missense	c.1019	p.K340T	1.000	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH1B	HGNC	ENSG00000196616				160	0	0	129	12	8.51064
ADH1B	0	genome.wustl.edu	37	4	100237376	100237376	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	100237376	100237376	T	G	SNP	ADH1B	ENST00000305046	human	ensembl	74_37	-1	known	missense	c.343	p.N115H	0.000	pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH1B	HGNC	ENSG00000196616				76	0	0	66	12	15.3846
DKK2	0	genome.wustl.edu	37	4	107846993	107846993	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	107846993	107846993	T	C	SNP	DKK2	ENST00000285311	human	ensembl	74_37	-1	novel	silent	c.336	p.R112	1.000	pfam_Dickkopf_N,superfamily_Zn2-C6_fun-type_DNA-bd	pfam_Dickkopf_N,superfamily_Zn2-C6_fun-type_DNA-bd	-	no_errors	DKK2	HGNC	ENSG00000155011				188	0	0	102	41	28.6713
EGF	0	genome.wustl.edu	37	4	110862293	110862293	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	110862293	110862293	A	C	SNP	EGF	ENST00000265171	human	ensembl	74_37	+1	known	silent	c.319	p.R107	0.966	pirsf_Pro-epidermal_GF,smart_LDLR_classB_rpt	pirsf_Pro-epidermal_GF,pfam_LDLR_classB_rpt,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt	-	no_errors	EGF	HGNC	ENSG00000138798				47	0	0	47	16	25.3968
ENPEP	0	genome.wustl.edu	37	4	111482701	111482701	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	111482701	111482701	T	G	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	missense	c.2861	p.L954R	0.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792				57	0	0	37	10	21.2766
ANK2	0	genome.wustl.edu	37	4	114278039	114278039	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	114278039	114278039	A	C	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.8265	p.E2755D	0.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				98	0	0	56	25	30.8642
SEC24D	0	genome.wustl.edu	37	4	119666127	119666127	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	119666127	119666127	T	G	SNP	SEC24D	ENST00000379735	human	ensembl	74_37	-1	known	missense	c.1799	p.K600T	0.933	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24D	HGNC	ENSG00000150961				82	0	0	95	7	6.86275
SYNPO2	0	genome.wustl.edu	37	4	119951776	119951776	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	119951776	119951776	T	G	SNP	SYNPO2	ENST00000307142	human	ensembl	74_37	+1	known	missense	c.1846	p.F616V	0.974	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2	HGNC	ENSG00000172403				154	0	0	87	31	26.2712
KIAA1109	0	genome.wustl.edu	37	4	123091861	123091861	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	123091861	123091861	T	G	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.59	p.L20R	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688				49	0	0	29	15	34.0909
IL21	0	genome.wustl.edu	37	4	123542014	123542014	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	123542014	123542014	A	C	SNP	IL21	ENST00000264497	human	ensembl	74_37	-1	known	missense	c.153	p.N51K	0.515	pfam_IL-15/IL-21_fam	pfam_IL-15/IL-21_fam	-	no_errors	IL21	HGNC	ENSG00000138684				93	0	0	59	31	34.4444
PHF17	0	genome.wustl.edu	37	4	129767570	129767570	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	129767570	129767570	A	G	SNP	PHF17	ENST00000226319	human	ensembl	74_37	+1	known	missense	c.179	p.D60G	1.000	pfam_Enhancer_polycomb-like_N	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF17	HGNC	ENSG00000077684				199	0	0	145	31	17.6136
SMARCA5	0	genome.wustl.edu	37	4	144468627	144468627	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	144468627	144468627	A	G	SNP	SMARCA5	ENST00000283131	human	ensembl	74_37	+1	known	missense	c.2743	p.I915V	1.000	pfam_SLIDE,superfamily_Homeodomain-like	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA5	HGNC	ENSG00000153147				98	0	0	83	5	5.68182
GYPB	0	genome.wustl.edu	37	4	144918742	144918742	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	144918742	144918742	A	T	SNP	GYPB	ENST00000283126	human	ensembl	74_37	-1	known	missense	c.221	p.I74N	0.003	pfam_Glycophorin	pfam_Glycophorin	-	no_errors	GYPB	HGNC	ENSG00000250361				55	0	0	39	12	23.5294
NR3C2	0	genome.wustl.edu	37	4	149356384	149356384	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	149356384	149356384	A	C	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	silent	c.1629	p.S543	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623				101	0	0	105	12	10.2564
KIAA0922	0	genome.wustl.edu	37	4	154553945	154553945	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	154553945	154553945	A	C	SNP	KIAA0922	ENST00000409959	human	ensembl	74_37	+1	known	missense	c.4283	p.N1428T	0.078	NULL	pfam_DUF3651_TMEM131	-	no_errors	KIAA0922	HGNC	ENSG00000121210				94	0	0	58	20	25.641
DCHS2	0	genome.wustl.edu	37	4	155243495	155243495	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	155243495	155243495	A	T	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	silent	c.2799	p.V933	0.063	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				73	0	0	56	14	20
NPY2R	0	genome.wustl.edu	37	4	156135225	156135225	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	156135225	156135225	A	G	SNP	NPY2R	ENST00000329476	human	ensembl	74_37	+1	known	missense	c.134	p.K45R	0.999	prints_NPY2_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY2_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	NPY2R	HGNC	ENSG00000185149				62	0	0	45	18	28.5714
CD38	0	genome.wustl.edu	37	4	15826541	15826541	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	15826541	15826541	A	G	SNP	CD38	ENST00000226279	human	ensembl	74_37	+1	known	missense	c.401	p.Q134R	0.001	pfam_ADP-ribosyl_cyclase	pfam_ADP-ribosyl_cyclase	-	no_errors	CD38	HGNC	ENSG00000004468				73	0	0	66	12	15.3846
SLBP	0	genome.wustl.edu	37	4	1696553	1696553	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	1696553	1696553	A	C	SNP	SLBP	ENST00000489418	human	ensembl	74_37	-1	known	missense	c.644	p.L215R	0.908	NULL	NULL	-	no_errors	SLBP	HGNC	ENSG00000163950				111	0	0	86	5	5.49451
HMGB2	0	genome.wustl.edu	37	4	174254250	174254250	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	174254250	174254250	T	G	SNP	HMGB2	ENST00000296503	human	ensembl	74_37	-1	known	missense	c.266	p.K89T	0.998	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGB2	HGNC	ENSG00000164104				264	0	0	178	33	15.6398
FBXO8	0	genome.wustl.edu	37	4	175183927	175183927	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	175183927	175183927	A	C	SNP	FBXO8	ENST00000393674	human	ensembl	74_37	-1	known	missense	c.317	p.L106R	1.000	superfamily_F-box_dom,pfscan_F-box_dom	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_F-box_dom,smart_Sec7_dom,pfscan_F-box_dom,pfscan_Sec7_dom	-	no_errors	FBXO8	HGNC	ENSG00000164117				55	0	0	39	11	22
LAP3	0	genome.wustl.edu	37	4	17586723	17586723	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	17586723	17586723	T	A	SNP	LAP3	ENST00000226299	human	ensembl	74_37	+1	known	missense	c.668	p.L223H	0.990	pfam_Peptidase_M17_C	pfam_Peptidase_M17_C,pfam_Peptidase_M17_N,prints_Leucine_aapep/pepB	-	no_errors	LAP3	HGNC	ENSG00000002549				124	0	0	84	10	10.6383
STOX2	0	genome.wustl.edu	37	4	184938289	184938289	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	184938289	184938289	A	C	SNP	STOX2	ENST00000308497	human	ensembl	74_37	+1	known	missense	c.2633	p.N878T	1.000	NULL	pfam_Storkhead-box_winged-helix	-	no_errors	STOX2	HGNC	ENSG00000173320				33	0	0	31	14	31.1111
ENPP6	0	genome.wustl.edu	37	4	185012349	185012349	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	185012349	185012349	A	T	SNP	ENPP6	ENST00000296741	human	ensembl	74_37	-1	known	missense	c.1304	p.L435H	0.030	NULL	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP6	HGNC	ENSG00000164303				99	0	0	82	25	23.3645
LGI2	0	genome.wustl.edu	37	4	25028556	25028556	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	25028556	25028556	A	C	SNP	LGI2	ENST00000382114	human	ensembl	74_37	-1	known	missense	c.275	p.L92R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EPTP,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI2	HGNC	ENSG00000153012				73	0	0	43	20	31.746
RBPJ	0	genome.wustl.edu	37	4	26430438	26430438	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	26430438	26430438	A	C	SNP	RBPJ	ENST00000342295	human	ensembl	74_37	+1	known	silent	c.883	p.R295	1.000	pfam_Beta-trefoil_DNA-bd_dom,superfamily_Beta-trefoil_DNA-bd_dom	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,pfam_IPT,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJ	HGNC	ENSG00000168214				49	0	0	25	12	32.4324
ZNF732	0	genome.wustl.edu	37	4	265143	265143	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	265143	265143	A	C	SNP	ZNF732	ENST00000419098	human	ensembl	74_37	-1	known	silent	c.1503	p.P501	0.799	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF732	HGNC	ENSG00000186777				10	0	0	6	4	40
TLR10	0	genome.wustl.edu	37	4	38776650	38776650	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	38776650	38776650	A	C	SNP	TLR10	ENST00000308973	human	ensembl	74_37	-1	known	missense	c.562	p.L188V	0.757	pirsf_Toll-like_receptor	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR10	HGNC	ENSG00000174123				90	0	0	79	30	27.5229
RFC1	0	genome.wustl.edu	37	4	39301996	39301996	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	39301996	39301996	T	C	SNP	RFC1	ENST00000381897	human	ensembl	74_37	-1	known	silent	c.2577	p.G859	0.982	superfamily_DNA_pol3_clamp-load_cplx_C,pirsf_DNA_replication_fac_C_lsu	pfam_DNA_replication_fac_RFC1_C,pfam_BRCT_dom,pfam_ATPase_AAA_core,superfamily_DNA_pol3_clamp-load_cplx_C,superfamily_P-loop_NTPase,superfamily_BRCT_dom,smart_BRCT_dom,smart_AAA+_ATPase,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom	-	no_errors	RFC1	HGNC	ENSG00000035928				66	0	0	54	8	12.9032
PHOX2B	0	genome.wustl.edu	37	4	41748224	41748224	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	41748224	41748224	T	G	SNP	PHOX2B	ENST00000226382	human	ensembl	74_37	-1	known	missense	c.545	p.D182A	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Antifreeze_1	-	no_errors	PHOX2B	HGNC	ENSG00000109132				91	0	0	47	8	14.5455
DCAF4L1	0	genome.wustl.edu	37	4	41984471	41984471	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	41984471	41984471	T	G	SNP	DCAF4L1	ENST00000333141	human	ensembl	74_37	+1	known	missense	c.662	p.F221C	0.972	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308				242	0	0	179	34	15.9624
GABRB1	0	genome.wustl.edu	37	4	47322225	47322225	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	47322225	47322225	T	A	SNP	GABRB1	ENST00000295454	human	ensembl	74_37	+1	known	missense	c.543	p.S181R	0.939	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB1	HGNC	ENSG00000163288				48	0	0	44	13	22.807
LRRC66	0	genome.wustl.edu	37	4	52861969	52861969	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	52861969	52861969	T	G	SNP	LRRC66	ENST00000343457	human	ensembl	74_37	-1	known	missense	c.1219	p.K407Q	0.054	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC66	HGNC	ENSG00000188993				101	0	0	73	10	12.0482
KDR	0	genome.wustl.edu	37	4	55962481	55962481	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	55962481	55962481	A	G	SNP	KDR	ENST00000263923	human	ensembl	74_37	-1	known	silent	c.2643	p.A881	0.984	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR2_rcpt	-	no_errors	KDR	HGNC	ENSG00000128052				94	0	0	47	28	37.3333
UGT2A2	0	genome.wustl.edu	37	4	70505259	70505259	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	70505259	70505259	T	G	SNP	UGT2A2	ENST00000457664	human	ensembl	74_37	-1	known	missense	c.100	p.I34L	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2A2	HGNC	ENSG00000271271				70	0	0	58	23	28.3951
MUC7	0	genome.wustl.edu	37	4	71346711	71346711	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	71346711	71346711	T	G	SNP	MUC7	ENST00000304887	human	ensembl	74_37	+1	known	missense	c.250	p.F84V	0.000	NULL	NULL	-	no_errors	MUC7	HGNC	ENSG00000171195				119	0	0	95	21	18.1034
SLC4A4	0	genome.wustl.edu	37	4	72413427	72413427	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	72413427	72413427	C	T	SNP	SLC4A4	ENST00000425175	human	ensembl	74_37	+1	known	missense	c.2684	p.P895L	1.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493				158	0	0	118	8	6.34921
PARM1	0	genome.wustl.edu	37	4	75937967	75937967	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	75937967	75937967	A	C	SNP	PARM1	ENST00000307428	human	ensembl	74_37	+1	known	missense	c.376	p.S126R	0.001	NULL	NULL	-	no_errors	PARM1	HGNC	ENSG00000169116				193	0	0	146	16	9.87654
C4orf26	0	genome.wustl.edu	37	4	76489614	76489614	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	76489614	76489614	A	C	SNP	C4orf26	ENST00000435974	human	ensembl	74_37	+1	putative	missense	c.402	p.E134D	0.000	NULL	NULL	-	no_errors	C4orf26	HGNC	ENSG00000174792				209	0	0	183	17	8.5
CDKL2	0	genome.wustl.edu	37	4	76532367	76532367	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	76532367	76532367	T	C	SNP	CDKL2	ENST00000429927	human	ensembl	74_37	-1	known	missense	c.542	p.K181R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL2	HGNC	ENSG00000138769				82	0	0	54	13	19.403
CXCL10	0	genome.wustl.edu	37	4	76944543	76944543	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	76944543	76944543	C	T	SNP	CXCL10	ENST00000306602	human	ensembl	74_37	-1	known	silent	c.42	p.L14	0.946	NULL	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	CXCL10	HGNC	ENSG00000169245				93	0	0	78	8	9.30233
ART3	0	genome.wustl.edu	37	4	77003337	77003337	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	77003337	77003337	A	T	SNP	ART3	ENST00000355810	human	ensembl	74_37	+1	known	nonsense	c.430	p.R144*	0.926	pfam_ART,prints_ART	pfam_ART,prints_ART	-	no_errors	ART3	HGNC	ENSG00000156219				53	0	0	49	18	26.8657
AFAP1	0	genome.wustl.edu	37	4	7774589	7774589	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	7774589	7774589	C	T	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	silent	c.2211	p.L737	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1	HGNC	ENSG00000196526				54	0	0	29	4	12.1212
FRAS1	0	genome.wustl.edu	37	4	79308837	79308837	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	79308837	79308837	A	C	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.3957	p.Q1319H	0.005	NULL	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759				31	0	0	24	4	14.2857
ANTXR2	0	genome.wustl.edu	37	4	80905052	80905052	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	80905052	80905052	C	T	SNP	ANTXR2	ENST00000307333	human	ensembl	74_37	-1	known	missense	c.1159	p.G387R	1.000	pirsf_Anthrax_toxin_rcpt	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_C,pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,superfamily_Ig_E-set,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR2	HGNC	ENSG00000163297				50	0	0	30	10	25
PRKG2	0	genome.wustl.edu	37	4	82088337	82088337	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	82088337	82088337	T	G	SNP	PRKG2	ENST00000264399	human	ensembl	74_37	-1	known	missense	c.890	p.K297T	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,prints_cGMP_dep_kinase	pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669				28	0	0	26	4	13.3333
SCD5	0	genome.wustl.edu	37	4	83552614	83552614	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	83552614	83552614	A	C	SNP	SCD5	ENST00000319540	human	ensembl	74_37	-1	known	missense	c.859	p.F287V	1.000	NULL	pfam_Fatty_acid_desaturase-1,prints_Fatty_acid_desaturase-1_core	-	no_errors	SCD5	HGNC	ENSG00000145284				61	0	0	46	19	29.2308
THAP9	0	genome.wustl.edu	37	4	83839152	83839152	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	83839152	83839152	T	G	SNP	THAP9	ENST00000302236	human	ensembl	74_37	+1	known	missense	c.1787	p.V596G	0.002	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP9	HGNC	ENSG00000168152				52	0	0	47	8	14.5455
HPSE	0	genome.wustl.edu	37	4	84222200	84222200	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	84222200	84222200	T	C	SNP	HPSE	ENST00000311412	human	ensembl	74_37	-1	known	missense	c.1385	p.K462R	0.870	NULL	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE	HGNC	ENSG00000173083				96	0	0	46	22	32.3529
HELQ	0	genome.wustl.edu	37	4	84350739	84350739	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	84350739	84350739	T	G	SNP	HELQ	ENST00000295488	human	ensembl	74_37	-1	known	missense	c.2456	p.K819T	0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HELQ	HGNC	ENSG00000163312				68	0	0	63	7	10
CPZ	0	genome.wustl.edu	37	4	8621297	8621297	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	8621297	8621297	T	C	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	missense	c.1912	p.F638L	1.000	NULL	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625				42	0	0	31	3	8.82353
MAPK10	0	genome.wustl.edu	37	4	87022315	87022315	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	87022315	87022315	T	G	SNP	MAPK10	ENST00000359221	human	ensembl	74_37	-1	known	missense	c.620	p.D207A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_MAPK_JNK,pfscan_Prot_kinase_dom	-	no_errors	MAPK10	HGNC	ENSG00000109339				62	0	0	47	9	16.0714
ZNF595	0	genome.wustl.edu	37	4	87142	87142	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	87142	87142	A	C	SNP	ZNF595	ENST00000339368	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.478	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701				44	0	0	38	20	34.4828
ZNF595	0	genome.wustl.edu	37	4	87313	87313	+	RNA	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	87313	87313	G	A	SNP	ZNF595	ENST00000339368	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701				30	0	0	20	5	20
PTPN13	0	genome.wustl.edu	37	4	87622548	87622548	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	87622548	87622548	T	G	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	silent	c.789	p.S263	0.993	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				33	0	0	21	7	25
HSD17B13	0	genome.wustl.edu	37	4	88234976	88234976	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	88234976	88234976	T	G	SNP	HSD17B13	ENST00000328546	human	ensembl	74_37	-1	known	silent	c.694	p.R232	0.999	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B13	HGNC	ENSG00000170509				71	0	0	63	9	12.5
DMP1	0	genome.wustl.edu	37	4	88583146	88583146	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	88583146	88583146	A	G	SNP	DMP1	ENST00000339673	human	ensembl	74_37	+1	known	silent	c.216	p.S72	0.035	pfam_DMP1	pfam_DMP1	-	no_errors	DMP1	HGNC	ENSG00000152592				76	0	0	66	6	8.33333
DMP1	0	genome.wustl.edu	37	4	88584170	88584170	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	88584170	88584170	T	G	SNP	DMP1	ENST00000339673	human	ensembl	74_37	+1	known	missense	c.1240	p.F414V	0.000	pfam_DMP1	pfam_DMP1	-	no_errors	DMP1	HGNC	ENSG00000152592				98	0	0	90	26	22.4138
DMP1	0	genome.wustl.edu	37	4	88584322	88584322	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	4	88584322	88584322	A	C	SNP	DMP1	ENST00000339673	human	ensembl	74_37	+1	known	missense	c.1392	p.E464D	0.955	pfam_DMP1	pfam_DMP1	-	no_errors	DMP1	HGNC	ENSG00000152592				125	0	0	89	26	22.6087
TRIM36	0	genome.wustl.edu	37	5	114480405	114480405	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	114480405	114480405	T	G	SNP	TRIM36	ENST00000282369	human	ensembl	74_37	-1	known	missense	c.661	p.N221H	0.998	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,pfam_Fibronectin_type3,pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM36	HGNC	ENSG00000152503				58	0	0	82	10	10.8696
ATG12	0	genome.wustl.edu	37	5	115173356	115173356	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	115173356	115173356	T	G	SNP	ATG12	ENST00000274459	human	ensembl	74_37	-1	known	missense	c.410	p.K137T	1.000	pfam_Atg12,pfam_Atg8_fam	pfam_Atg12,pfam_Atg8_fam	-	no_errors	ATG12	HGNC	ENSG00000145782				98	0	0	83	11	11.7021
HSD17B4	0	genome.wustl.edu	37	5	118829639	118829639	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	118829639	118829639	A	T	SNP	HSD17B4	ENST00000256216	human	ensembl	74_37	+1	known	missense	c.866	p.Q289L	1.000	NULL	pfam_MaoC_dom,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835				66	0	0	59	6	9.23077
HSD17B4	0	genome.wustl.edu	37	5	118829640	118829640	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	118829640	118829640	A	G	SNP	HSD17B4	ENST00000256216	human	ensembl	74_37	+1	known	silent	c.867	p.Q289	1.000	NULL	pfam_MaoC_dom,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835				66	0	0	60	6	9.09091
LOX	0	genome.wustl.edu	37	5	121413231	121413231	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	121413231	121413231	T	G	SNP	LOX	ENST00000231004	human	ensembl	74_37	-1	known	missense	c.450	p.E150D	0.000	NULL	pfam_Lysyl_oxidase,prints_Lysyl_oxidase	-	no_errors	LOX	HGNC	ENSG00000113083				62	0	0	55	4	6.77966
SNCAIP	0	genome.wustl.edu	37	5	121786636	121786636	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	121786636	121786636	A	C	SNP	SNCAIP	ENST00000379533	human	ensembl	74_37	+1	known	silent	c.2235	p.R745	0.996	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692				87	0	0	56	18	24.3243
ZNF608	0	genome.wustl.edu	37	5	124080350	124080350	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	124080350	124080350	A	C	SNP	ZNF608	ENST00000306315	human	ensembl	74_37	-1	known	silent	c.333	p.T111	1.000	NULL	NULL	-	no_errors	ZNF608	HGNC	ENSG00000168916				73	0	0	39	14	26.4151
SLC12A2	0	genome.wustl.edu	37	5	127483312	127483312	+	Splice_Site	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	127483312	127483312	A	G	SNP	SLC12A2	ENST00000262461	human	ensembl	74_37	+1	known	splice_site	c.1774-2	e11-2	1.000	-	-	-	no_errors	SLC12A2	HGNC	ENSG00000064651				63	0	0	58	8	12.1212
ADAMTS19	0	genome.wustl.edu	37	5	128862008	128862008	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	128862008	128862008	A	C	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	silent	c.927	p.A309	0.984	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808				53	0	0	45	9	16.6667
HSPA4	0	genome.wustl.edu	37	5	132431895	132431895	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	132431895	132431895	T	G	SNP	HSPA4	ENST00000304858	human	ensembl	74_37	+1	known	missense	c.1756	p.L586V	0.006	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA4	HGNC	ENSG00000170606				54	0	0	56	12	17.6471
CDKL3	0	genome.wustl.edu	37	5	133657596	133657596	+	Splice_Site	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	133657596	133657596	T	C	SNP	CDKL3	ENST00000265334	human	ensembl	74_37	-1	known	splice_site	c.540-2	e4-2	1.000	-	-	-	no_errors	CDKL3	HGNC	ENSG00000006837				36	0	0	26	13	33.3333
TXNDC15	0	genome.wustl.edu	37	5	134223395	134223395	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	134223395	134223395	A	C	SNP	TXNDC15	ENST00000358387	human	ensembl	74_37	+1	known	missense	c.114	p.E38D	0.458	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC15	HGNC	ENSG00000113621				77	0	0	64	4	5.88235
LOC100996485	0	genome.wustl.edu	37	5	134678935	134678935	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	134678935	134678935	A	C	SNP	LOC100996485	ENST00000432382	human	ensembl	74_37	+1	putative	missense	c.217	p.S73R	0.000	NULL	NULL	-	no_errors	CTC-349C3.1	Clone_based_vega_gene	ENSG00000224186				101	0	0	71	15	17.4419
TRPC7	0	genome.wustl.edu	37	5	135567231	135567231	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	135567231	135567231	T	G	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.1851	p.E617D	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018				16	0	0	16	5	23.8095
FAM13B	0	genome.wustl.edu	37	5	137275969	137275969	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	137275969	137275969	T	G	SNP	FAM13B	ENST00000033079	human	ensembl	74_37	-1	known	missense	c.2693	p.K898T	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	FAM13B	HGNC	ENSG00000031003				67	0	0	60	14	18.9189
DNAH5	0	genome.wustl.edu	37	5	13876847	13876847	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	13876847	13876847	T	C	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.3342	p.K1114	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				74	0	0	69	10	12.6582
DNAH5	0	genome.wustl.edu	37	5	13894825	13894825	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	13894825	13894825	A	C	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.2365	p.L789V	0.304	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				129	0	0	96	33	25.5814
PCDHA2	0	genome.wustl.edu	37	5	140175798	140175798	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140175798	140175798	A	G	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	missense	c.1249	p.S417G	0.062	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969				239	0	0	133	45	25.2809
PCDHA4	0	genome.wustl.edu	37	5	140188288	140188288	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140188288	140188288	A	T	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.1516	p.S506C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967				107	0	0	103	16	13.4454
PCDHA7	0	genome.wustl.edu	37	5	140214018	140214018	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140214018	140214018	T	G	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.50	p.F17C	0.021	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				121	0	0	77	32	29.3578
PCDHA12	0	genome.wustl.edu	37	5	140256514	140256514	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140256514	140256514	A	C	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.1457	p.K486T	0.975	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664				163	0	0	121	20	14.1844
PCDHB1	0	genome.wustl.edu	37	5	140431782	140431782	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140431782	140431782	T	A	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	missense	c.727	p.S243T	0.085	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815				42	0	0	24	10	29.4118
PCDHB1	0	genome.wustl.edu	37	5	140431955	140431955	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140431955	140431955	A	C	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	missense	c.900	p.E300D	0.137	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815				97	0	0	79	12	13.1868
PCDHB12	0	genome.wustl.edu	37	5	140590099	140590099	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140590099	140590099	T	A	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	silent	c.1620	p.A540	0.459	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				135	0	0	88	33	27.2727
TAF7	0	genome.wustl.edu	37	5	140699524	140699524	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140699524	140699524	T	G	SNP	TAF7	ENST00000313368	human	ensembl	74_37	-1	known	silent	c.88	p.R30	0.999	pfam_TAFII55_prot_cons_reg	pfam_TAFII55_prot_cons_reg	-	no_errors	TAF7	HGNC	ENSG00000178913				104	0	0	61	19	23.75
PCDHGA3	0	genome.wustl.edu	37	5	140725704	140725704	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140725704	140725704	T	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	missense	c.2104	p.C702S	0.999	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245				169	0	0	139	16	10.3226
PCDHGB4	0	genome.wustl.edu	37	5	140768320	140768320	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140768320	140768320	T	G	SNP	PCDHGB4	ENST00000519479	human	ensembl	74_37	+1	known	missense	c.869	p.F290C	0.968	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953				90	0	0	65	13	16.6667
PCDHGA8	0	genome.wustl.edu	37	5	140773688	140773688	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140773688	140773688	T	C	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	silent	c.1308	p.T436	0.112	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767				34	0	0	17	6	26.087
PCDHGB6	0	genome.wustl.edu	37	5	140788105	140788105	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140788105	140788105	T	C	SNP	PCDHGB6	ENST00000520790	human	ensembl	74_37	+1	known	silent	c.336	p.N112	0.991	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305				117	0	0	125	17	11.9718
PCDHGB6	0	genome.wustl.edu	37	5	140788397	140788397	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140788397	140788397	T	G	SNP	PCDHGB6	ENST00000520790	human	ensembl	74_37	+1	known	missense	c.628	p.L210V	0.083	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305				28	0	0	28	5	15.1515
PCDHGB6	0	genome.wustl.edu	37	5	140789877	140789877	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140789877	140789877	T	A	SNP	PCDHGB6	ENST00000520790	human	ensembl	74_37	+1	known	missense	c.2108	p.F703Y	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305				163	0	0	142	15	9.55414
PCDHGA10	0	genome.wustl.edu	37	5	140794709	140794709	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140794709	140794709	C	T	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	missense	c.1967	p.P656L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				139	0	0	99	22	18.1818
PCDHGA12	0	genome.wustl.edu	37	5	140811196	140811196	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	140811196	140811196	A	G	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	silent	c.870	p.Q290	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159				164	0	0	93	41	30.597
SPRY4	0	genome.wustl.edu	37	5	141694376	141694376	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	141694376	141694376	T	C	SNP	SPRY4	ENST00000344120	human	ensembl	74_37	-1	known	missense	c.367	p.S123G	1.000	NULL	pfam_Sprouty	-	no_errors	SPRY4	HGNC	ENSG00000187678				108	0	0	62	9	12.6761
RBM27	0	genome.wustl.edu	37	5	145616914	145616914	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	145616914	145616914	A	C	SNP	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	missense	c.1198	p.S400R	1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009				111	0	0	95	8	7.76699
RBM27	0	genome.wustl.edu	37	5	145648801	145648801	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	145648801	145648801	A	C	SNP	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	missense	c.2483	p.K828T	1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009				70	0	0	68	10	12.8205
FAM105A	0	genome.wustl.edu	37	5	14602336	14602336	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	14602336	14602336	A	C	SNP	FAM105A	ENST00000274217	human	ensembl	74_37	+1	known	silent	c.393	p.R131	0.004	NULL	prints_FAM105,prints_FAM105A	-	no_errors	FAM105A	HGNC	ENSG00000145569				49	0	0	32	9	21.9512
DPYSL3	0	genome.wustl.edu	37	5	146798174	146798174	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	146798174	146798174	A	C	SNP	DPYSL3	ENST00000398514	human	ensembl	74_37	-1	known	missense	c.149	p.I50S	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657				157	0	0	117	14	10.687
ARHGEF37	0	genome.wustl.edu	37	5	149003664	149003664	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	149003664	149003664	A	G	SNP	ARHGEF37	ENST00000333677	human	ensembl	74_37	+1	known	silent	c.1425	p.Q475	0.121	NULL	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF37	HGNC	ENSG00000183111				81	0	0	74	6	7.5
GRIA1	0	genome.wustl.edu	37	5	153149895	153149895	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	153149895	153149895	A	G	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	silent	c.2220	p.K740	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				73	0	0	64	16	20
RARS	0	genome.wustl.edu	37	5	167921609	167921609	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	167921609	167921609	T	G	SNP	RARS	ENST00000231572	human	ensembl	74_37	+1	known	missense	c.533	p.L178R	0.998	pfam_Arg-tRNA-synth_Ia_core,superfamily_Arg-tRNA-synth_N,tigrfam_Arg-tRNA-ligase_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,pfam_Arg-tRNA-synth_N,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS	HGNC	ENSG00000113643				121	0	0	73	23	23.9583
PANK3	0	genome.wustl.edu	37	5	167988433	167988433	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	167988433	167988433	T	A	SNP	PANK3	ENST00000239231	human	ensembl	74_37	-1	known	missense	c.901	p.I301F	1.000	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK3	HGNC	ENSG00000120137				37	0	0	38	3	7.31707
SLIT3	0	genome.wustl.edu	37	5	168180908	168180908	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	168180908	168180908	T	C	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	missense	c.1790	p.H597R	0.997	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347				54	0	0	38	9	19.1489
RANBP17	0	genome.wustl.edu	37	5	170669756	170669756	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	170669756	170669756	T	G	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.2708	p.I903S	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764				152	0	0	116	42	26.5823
CREBRF	0	genome.wustl.edu	37	5	172517706	172517706	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	172517706	172517706	A	C	SNP	CREBRF	ENST00000540014	human	ensembl	74_37	+1	known	missense	c.524	p.K175T	1.000	NULL	NULL	-	no_errors	CREBRF	HGNC	ENSG00000164463				62	0	0	50	12	19.3548
SIMC1	0	genome.wustl.edu	37	5	175722138	175722138	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	175722138	175722138	T	G	SNP	SIMC1	ENST00000443967	human	ensembl	74_37	+1	known	missense	c.1480	p.F494V	1.000	NULL	NULL	-	no_errors	SIMC1	HGNC	ENSG00000170085				86	0	0	60	10	14.2857
GPRIN1	0	genome.wustl.edu	37	5	176024901	176024901	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	176024901	176024901	T	C	SNP	GPRIN1	ENST00000303991	human	ensembl	74_37	-1	known	silent	c.1935	p.Q645	0.000	NULL	NULL	-	no_errors	GPRIN1	HGNC	ENSG00000169258				44	0	0	31	4	11.4286
GUSBP1	0	genome.wustl.edu	37	5	21497235	21497235	+	RNA	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	21497235	21497235	C	T	SNP	GUSBP1	ENST00000508260	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GUSBP1	HGNC	ENSG00000183666				30	0	0	25	3	10.7143
CDH9	0	genome.wustl.edu	37	5	26890056	26890056	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	26890056	26890056	T	G	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.1401	p.K467N	0.973	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100				119	0	0	77	43	35.8333
ADAMTS12	0	genome.wustl.edu	37	5	33684103	33684103	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	33684103	33684103	T	G	SNP	ADAMTS12	ENST00000504830	human	ensembl	74_37	-1	known	missense	c.692	p.N231T	0.000	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388				86	0	0	50	19	27.5362
SPEF2	0	genome.wustl.edu	37	5	35649522	35649522	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	35649522	35649522	A	G	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	silent	c.786	p.K262	1.000	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582				135	0	0	81	31	27.6786
NIPBL	0	genome.wustl.edu	37	5	37010309	37010309	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	37010309	37010309	A	C	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.4542	p.E1514D	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				61	0	0	49	15	23.4375
C5orf42	0	genome.wustl.edu	37	5	37179471	37179471	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	37179471	37179471	A	C	SNP	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	missense	c.5812	p.L1938V	0.181	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603				85	0	0	55	9	14.0625
LIFR	0	genome.wustl.edu	37	5	38484884	38484884	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	38484884	38484884	G	A	SNP	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	nonsense	c.2584	p.R862*	0.960	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594				42	0	0	43	5	10.4167
NIM1	0	genome.wustl.edu	37	5	43245956	43245956	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	43245956	43245956	A	C	SNP	NIM1	ENST00000326035	human	ensembl	74_37	+1	known	missense	c.79	p.S27R	0.932	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NIM1	Uniprot_gn	ENSG00000177453				140	0	0	124	16	11.4286
AHRR	0	genome.wustl.edu	37	5	432582	432582	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	432582	432582	A	C	SNP	AHRR	ENST00000316418	human	ensembl	74_37	+1	known	missense	c.979	p.K327Q	0.876	NULL	pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	AHRR	HGNC	ENSG00000063438				98	0	0	61	6	8.95522
ADAMTS16	0	genome.wustl.edu	37	5	5319213	5319213	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	5319213	5319213	A	G	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.3637	p.K1213E	0.965	pfam_PLAC,pfscan_PLAC	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536				31	0	0	15	4	21.0526
IPO11	0	genome.wustl.edu	37	5	61762980	61762980	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	61762980	61762980	T	G	SNP	IPO11	ENST00000409296	human	ensembl	74_37	+1	known	missense	c.659	p.F220C	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO11	HGNC	ENSG00000086200				57	0	0	64	5	7.24638
SREK1	0	genome.wustl.edu	37	5	65449504	65449504	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	65449504	65449504	A	G	SNP	SREK1	ENST00000523851	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.968	-	-	-	no_errors	SREK1	HGNC	ENSG00000153914				97	0	0	80	11	12.0879
SLC30A5	0	genome.wustl.edu	37	5	68423839	68423839	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	68423839	68423839	A	C	SNP	SLC30A5	ENST00000396591	human	ensembl	74_37	+1	known	missense	c.2007	p.K669N	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A5	HGNC	ENSG00000145740				138	0	0	146	14	8.75
RAD17	0	genome.wustl.edu	37	5	68687699	68687699	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	68687699	68687699	A	T	SNP	RAD17	ENST00000380774	human	ensembl	74_37	+1	known	nonsense	c.1081	p.K361*	1.000	tigrfam_Checkpoint_prot_Rad24_fun/met	superfamily_P-loop_NTPase,tigrfam_Checkpoint_prot_Rad24_fun/met	-	no_errors	RAD17	HGNC	ENSG00000152942				107	0	0	69	35	33.6538
BDP1	0	genome.wustl.edu	37	5	70818663	70818663	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	70818663	70818663	A	C	SNP	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	missense	c.5274	p.K1758N	0.000	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734				81	0	0	62	19	23.4568
ZNF366	0	genome.wustl.edu	37	5	71756638	71756638	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	71756638	71756638	A	G	SNP	ZNF366	ENST00000318442	human	ensembl	74_37	-1	known	missense	c.686	p.V229A	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF366	HGNC	ENSG00000178175				190	0	0	94	30	24.1935
POLK	0	genome.wustl.edu	37	5	74872668	74872668	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	74872668	74872668	T	G	SNP	POLK	ENST00000241436	human	ensembl	74_37	+1	known	missense	c.604	p.L202V	1.000	pfam_DNA_repair_prot_UmuC-like,pfscan_DNA_repair_prot_UmuC-like_N	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,pfam_PolY_HhH_motif,superfamily_DNA_pol_Y-fam_little_finger,smart_Znf_Rad18_put,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLK	HGNC	ENSG00000122008				41	0	0	30	12	28.5714
F2R	0	genome.wustl.edu	37	5	76029324	76029324	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	76029324	76029324	C	T	SNP	F2R	ENST00000319211	human	ensembl	74_37	+1	known	missense	c.1274	p.T425I	0.996	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Thrmbn_rcpt,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2R	HGNC	ENSG00000181104				54	0	0	50	6	10.7143
WDR41	0	genome.wustl.edu	37	5	76732142	76732142	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	76732142	76732142	T	C	SNP	WDR41	ENST00000296679	human	ensembl	74_37	-1	known	missense	c.1171	p.T391A	0.001	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR41	HGNC	ENSG00000164253				65	0	0	49	17	25.7576
BHMT	0	genome.wustl.edu	37	5	78426886	78426886	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	78426886	78426886	A	G	SNP	BHMT	ENST00000274353	human	ensembl	74_37	+1	known	missense	c.1168	p.T390A	0.228	NULL	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT,pfscan_S_MeTrfase	-	no_errors	BHMT	HGNC	ENSG00000145692				197	0	0	124	34	21.519
CMYA5	0	genome.wustl.edu	37	5	79025083	79025083	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	79025083	79025083	A	C	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.495	p.K165N	0.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				43	0	0	42	7	14.2857
THBS4	0	genome.wustl.edu	37	5	79372825	79372825	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	79372825	79372825	A	G	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	silent	c.2040	p.P680	0.446	NULL	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296				232	0	0	156	41	20.8122
SPZ1	0	genome.wustl.edu	37	5	79616290	79616290	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	79616290	79616290	T	G	SNP	SPZ1	ENST00000296739	human	ensembl	74_37	+1	known	missense	c.256	p.F86V	0.000	NULL	NULL	-	no_errors	SPZ1	HGNC	ENSG00000164299				100	0	0	81	8	8.98876
TAS2R1	0	genome.wustl.edu	37	5	9629253	9629253	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	9629253	9629253	A	C	SNP	TAS2R1	ENST00000382492	human	ensembl	74_37	-1	known	missense	c.892	p.C298G	0.006	NULL	pfam_TAS2_rcpt	-	no_errors	TAS2R1	HGNC	ENSG00000169777				112	0	0	70	18	20.4545
PRDM13	0	genome.wustl.edu	37	6	100062409	100062409	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	100062409	100062409	A	C	SNP	PRDM13	ENST00000369215	human	ensembl	74_37	+1	known	missense	c.1898	p.E633A	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM13	HGNC	ENSG00000112238				32	0	0	26	9	25.7143
TFAP2A	0	genome.wustl.edu	37	6	10419705	10419705	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	10419705	10419705	A	G	SNP	TFAP2A	ENST00000473652	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.935	-	-	-	no_errors	TFAP2A	HGNC	ENSG00000137203				84	0	0	64	22	25.5814
GCNT2	0	genome.wustl.edu	37	6	10586363	10586363	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	10586363	10586363	T	C	SNP	GCNT2	ENST00000265012	human	ensembl	74_37	+1	known	silent	c.141	p.T47	0.000	NULL	pfam_Glyco_trans_14	-	no_errors	GCNT2	HGNC	ENSG00000111846				201	0	0	141	51	26.5625
MICAL1	0	genome.wustl.edu	37	6	109770629	109770629	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	109770629	109770629	T	C	SNP	MICAL1	ENST00000368952	human	ensembl	74_37	-1	known	missense	c.1547	p.K516R	0.726	superfamily_CH-domain	pfam_DUF3585,pfam_CH-domain,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICAL1	HGNC	ENSG00000135596				134	0	0	94	10	9.61538
CDK19	0	genome.wustl.edu	37	6	110988698	110988698	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	110988698	110988698	A	C	SNP	CDK19	ENST00000368911	human	ensembl	74_37	-1	known	missense	c.395	p.L132R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK19	HGNC	ENSG00000155111				85	0	0	63	5	7.35294
KIAA1919	0	genome.wustl.edu	37	6	111588294	111588294	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	111588294	111588294	A	G	SNP	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	missense	c.1529	p.E510G	0.000	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214				80	0	0	75	7	8.53659
RFPL4B	0	genome.wustl.edu	37	6	112671189	112671189	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	112671189	112671189	T	C	SNP	RFPL4B	ENST00000441065	human	ensembl	74_37	+1	known	silent	c.279	p.F93	0.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL4B	HGNC	ENSG00000251258				57	0	0	35	14	28.5714
HS3ST5	0	genome.wustl.edu	37	6	114379073	114379073	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	114379073	114379073	T	G	SNP	HS3ST5	ENST00000312719	human	ensembl	74_37	-1	known	missense	c.389	p.E130A	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST5	HGNC	ENSG00000249853				181	0	0	96	36	27.2727
GPRC6A	0	genome.wustl.edu	37	6	117128056	117128056	+	Splice_Site	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	117128056	117128056	A	C	SNP	GPRC6A	ENST00000530250	human	ensembl	74_37	-1	known	splice_site	c.810+2	e3+2	1.000	-	-	-	no_errors	GPRC6A	HGNC	ENSG00000173612				117	0	0	92	16	14.8148
KIAA0408	0	genome.wustl.edu	37	6	127768046	127768046	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	127768046	127768046	T	C	SNP	KIAA0408	ENST00000483725	human	ensembl	74_37	-1	novel	missense	c.1418	p.K473R	0.912	NULL	NULL	-	no_errors	KIAA0408	HGNC	ENSG00000189367				117	0	0	89	11	11
ENPP3	0	genome.wustl.edu	37	6	132014759	132014759	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	132014759	132014759	T	C	SNP	ENPP3	ENST00000357639	human	ensembl	74_37	+1	known	silent	c.1407	p.A469	0.995	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom	-	no_errors	ENPP3	HGNC	ENSG00000154269				147	0	0	121	30	19.8675
ALDH8A1	0	genome.wustl.edu	37	6	135239997	135239997	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	135239997	135239997	A	C	SNP	ALDH8A1	ENST00000265605	human	ensembl	74_37	-1	known	missense	c.1020	p.S340R	0.998	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH8A1	HGNC	ENSG00000118514				116	0	0	108	12	10
GRM1	0	genome.wustl.edu	37	6	146351241	146351241	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	146351241	146351241	T	G	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	silent	c.588	p.T196	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				126	0	0	95	28	22.7642
GRM1	0	genome.wustl.edu	37	6	146755850	146755850	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	146755850	146755850	A	C	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.3503	p.E1168A	1.000	pfam_Metabotropic_Glu_rcpt_Homer-bd,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				78	0	0	60	18	23.0769
TAB2	0	genome.wustl.edu	37	6	149699164	149699164	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	149699164	149699164	A	T	SNP	TAB2	ENST00000286332	human	ensembl	74_37	+1	known	missense	c.113	p.N38I	1.000	pfam_CUE,smart_CUE,pfscan_CUE	pfam_CUE,pfam_Znf_RanBP2,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB2	HGNC	ENSG00000055208				44	0	0	27	15	35.7143
RAET1E	0	genome.wustl.edu	37	6	150209679	150209679	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	150209679	150209679	T	G	SNP	RAET1E	ENST00000357183	human	ensembl	74_37	-1	known	missense	c.747	p.Q249H	0.001	NULL	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	RAET1E	HGNC	ENSG00000164520				114	0	0	100	13	11.5044
PLEKHG1	0	genome.wustl.edu	37	6	151152705	151152705	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	151152705	151152705	T	G	SNP	PLEKHG1	ENST00000358517	human	ensembl	74_37	+1	known	missense	c.2458	p.L820V	0.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG1	HGNC	ENSG00000120278				163	0	0	93	27	22.5
SERAC1	0	genome.wustl.edu	37	6	158537312	158537312	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	158537312	158537312	T	C	SNP	SERAC1	ENST00000367104	human	ensembl	74_37	-1	known	missense	c.1406	p.K469R	1.000	pfam_PGAP1-like	pfam_PGAP1-like,superfamily_ARM-type_fold	-	no_errors	SERAC1	HGNC	ENSG00000122335				63	0	0	45	23	33.8235
FNDC1	0	genome.wustl.edu	37	6	159653494	159653494	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	159653494	159653494	T	G	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.1950	p.D650E	0.031	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694				79	0	0	58	11	15.942
LPA	0	genome.wustl.edu	37	6	160953592	160953592	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	160953592	160953592	G	A	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	missense	c.5932	p.H1978Y	0.130	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670				77	0	0	49	8	14.0351
LPA	0	genome.wustl.edu	37	6	161022106	161022106	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	161022106	161022106	T	C	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	silent	c.2970	p.R990	0.499	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670				109	0	0	60	19	24.0506
ATXN1	0	genome.wustl.edu	37	6	16327457	16327457	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	16327457	16327457	A	T	SNP	ATXN1	ENST00000244769	human	ensembl	74_37	-1	known	missense	c.1085	p.V362E	1.000	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788				178	0	0	118	24	16.9014
UNC93A	0	genome.wustl.edu	37	6	167717594	167717594	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	167717594	167717594	A	C	SNP	UNC93A	ENST00000230256	human	ensembl	74_37	+1	known	missense	c.813	p.Q271H	0.965	superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93A	HGNC	ENSG00000112494				159	0	0	118	41	25.7862
KIF13A	0	genome.wustl.edu	37	6	17764753	17764753	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	17764753	17764753	A	G	SNP	KIF13A	ENST00000259711	human	ensembl	74_37	-1	known	missense	c.5006	p.L1669P	0.995	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC	ENSG00000137177				80	0	0	58	21	26.5823
KDM1B	0	genome.wustl.edu	37	6	18213945	18213945	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	18213945	18213945	T	C	SNP	KDM1B	ENST00000388870	human	ensembl	74_37	+1	known	missense	c.2045	p.F682S	1.000	pfam_Amino_oxidase	pfam_Amino_oxidase,pfam_Znf_CW,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_SWIRM,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,superfamily_Homeodomain-like,pfscan_SWIRM,pfscan_Znf_CW	-	no_errors	KDM1B	HGNC	ENSG00000165097				224	1	0.444444	146	62	29.8077
KIAA0319	0	genome.wustl.edu	37	6	24576688	24576688	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	24576688	24576688	A	C	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.1642	p.L548V	0.824	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				452	0	0	378	51	11.8881
KIAA0319	0	genome.wustl.edu	37	6	24581195	24581195	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	24581195	24581195	T	G	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.1238	p.N413T	0.997	pfam_PKD/REJ-like,smart_Fibronectin_type3,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				137	0	0	81	26	24.2991
SLC17A4	0	genome.wustl.edu	37	6	25773785	25773785	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	25773785	25773785	A	C	SNP	SLC17A4	ENST00000377905	human	ensembl	74_37	+1	known	missense	c.870	p.K290N	0.793	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A4	HGNC	ENSG00000146039				67	0	0	45	23	33.8235
HIST1H1A	0	genome.wustl.edu	37	6	26017925	26017925	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	26017925	26017925	A	G	SNP	HIST1H1A	ENST00000244573	human	ensembl	74_37	-1	known	silent	c.36	p.S12	0.001	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1A	HGNC	ENSG00000124610				77	0	0	40	11	21.5686
HIST1H4B	0	genome.wustl.edu	37	6	26027235	26027235	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	26027235	26027235	G	A	SNP	HIST1H4B	ENST00000377364	human	ensembl	74_37	-1	known	silent	c.246	p.V82	0.993	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4B	HGNC	ENSG00000124529				101	0	0	52	16	23.5294
BTN3A1	0	genome.wustl.edu	37	6	26405873	26405873	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	26405873	26405873	T	C	SNP	BTN3A1	ENST00000289361	human	ensembl	74_37	+1	known	missense	c.82	p.S28P	0.896	pfscan_Ig-like_dom	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTN3A1	HGNC	ENSG00000026950				98	0	0	62	9	12.6761
ZNF311	0	genome.wustl.edu	37	6	28967434	28967434	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	28967434	28967434	T	G	SNP	ZNF311	ENST00000483450	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.155	-	-	-	no_errors	ZNF311	HGNC	ENSG00000197935				27	0	0	17	7	29.1667
OR14J1	0	genome.wustl.edu	37	6	29275414	29275414	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	29275414	29275414	A	G	SNP	OR14J1	ENST00000377160	human	ensembl	74_37	+1	known	silent	c.948	p.K316	0.010	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14J1	HGNC	ENSG00000204695				77	0	0	67	16	19.2771
TRIM39	0	genome.wustl.edu	37	6	30297161	30297161	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	30297161	30297161	T	G	SNP	TRIM39	ENST00000376656	human	ensembl	74_37	+1	known	missense	c.67	p.L23V	0.618	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM39	HGNC	ENSG00000204599				237	0	0	184	21	10.2439
TRIM39	0	genome.wustl.edu	37	6	30297387	30297387	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	30297387	30297387	A	G	SNP	TRIM39	ENST00000376656	human	ensembl	74_37	+1	known	missense	c.293	p.K98R	0.963	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM39	HGNC	ENSG00000204599				52	0	0	61	11	15.2778
GTF2H4	0	genome.wustl.edu	37	6	30879519	30879519	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	30879519	30879519	A	C	SNP	GTF2H4	ENST00000259895	human	ensembl	74_37	+1	known	missense	c.800	p.E267A	1.000	pfam_TFIIH_p52/Tfb2,tigrfam_TFIIH_p52/Tfb2	pfam_TFIIH_p52/Tfb2,tigrfam_TFIIH_p52/Tfb2	-	no_errors	GTF2H4	HGNC	ENSG00000213780				82	0	0	64	9	12.3288
HLA-B	0	genome.wustl.edu	37	6	31323279	31323279	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	31323279	31323279	A	C	SNP	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	missense	c.710	p.I237S	0.815	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				162	0	0	97	9	8.49057
LTA	0	genome.wustl.edu	37	6	31541078	31541078	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	31541078	31541078	T	C	SNP	LTA	ENST00000418386	human	ensembl	74_37	+1	known	missense	c.226	p.S76P	0.009	superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF_beta,prints_TNF	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF_beta,prints_TNF	-	no_errors	LTA	HGNC	ENSG00000226979				82	0	0	62	19	23.4568
MDGA1	0	genome.wustl.edu	37	6	37606368	37606368	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	37606368	37606368	T	A	SNP	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	missense	c.2624	p.K875M	1.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139				61	0	0	21	15	41.6667
DNAH8	0	genome.wustl.edu	37	6	38825338	38825338	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	38825338	38825338	A	C	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.5127	p.E1709D	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				73	0	0	62	7	10.1449
MOCS1	0	genome.wustl.edu	37	6	39874134	39874134	+	Nonstop_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	39874134	39874134	T	G	SNP	MOCS1	ENST00000340692	human	ensembl	74_37	-1	known	nonstop	c.1910	p.*637S	0.957	NULL	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615				234	0	0	180	12	6.25
APOBEC2	0	genome.wustl.edu	37	6	41029181	41029181	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	41029181	41029181	A	T	SNP	APOBEC2	ENST00000244669	human	ensembl	74_37	+1	known	missense	c.246	p.Q82H	0.974	pfam_APOBEC_N	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC2	HGNC	ENSG00000124701				129	0	0	81	25	23.5849
OARD1	0	genome.wustl.edu	37	6	41037846	41037846	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	41037846	41037846	A	G	SNP	OARD1	ENST00000424266	human	ensembl	74_37	-1	known	missense	c.212	p.L71P	1.000	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	-	no_errors	OARD1	HGNC	ENSG00000124596				113	0	0	106	21	16.5354
PEX6	0	genome.wustl.edu	37	6	42934394	42934394	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	42934394	42934394	A	C	SNP	PEX6	ENST00000304611	human	ensembl	74_37	-1	known	missense	c.1963	p.L655V	0.008	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	PEX6	HGNC	ENSG00000124587				246	0	0	172	21	10.8808
SLC22A7	0	genome.wustl.edu	37	6	43267175	43267175	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	43267175	43267175	T	G	SNP	SLC22A7	ENST00000372585	human	ensembl	74_37	+1	known	silent	c.447	p.T149	0.716	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A7	HGNC	ENSG00000137204				117	0	0	58	29	33.3333
AARS2	0	genome.wustl.edu	37	6	44269806	44269806	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	44269806	44269806	T	G	SNP	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	missense	c.2589	p.Q863H	0.796	tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608				39	0	0	28	6	17.6471
CYP39A1	0	genome.wustl.edu	37	6	46620249	46620249	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	46620249	46620249	T	C	SNP	CYP39A1	ENST00000275016	human	ensembl	74_37	-1	known	missense	c.71	p.K24R	0.001	superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	-	no_errors	CYP39A1	HGNC	ENSG00000146233				358	0	0	305	37	10.8187
TDRD6	0	genome.wustl.edu	37	6	46657408	46657408	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	46657408	46657408	A	G	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.1543	p.K515E	0.975	pfam_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113				139	1	0.714286	123	15	10.8696
GPR111	0	genome.wustl.edu	37	6	47649717	47649717	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	47649717	47649717	A	G	SNP	GPR111	ENST00000296862	human	ensembl	74_37	+1	known	silent	c.1422	p.Q474	0.005	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR111	HGNC	ENSG00000164393				116	0	0	90	25	21.7391
OPN5	0	genome.wustl.edu	37	6	47763080	47763080	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	47763080	47763080	C	T	SNP	OPN5	ENST00000371211	human	ensembl	74_37	+1	known	silent	c.537	p.F179	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Peropsin	-	no_errors	OPN5	HGNC	ENSG00000124818				79	0	0	43	23	34.8485
PKHD1	0	genome.wustl.edu	37	6	51524683	51524683	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	51524683	51524683	A	C	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.10241	p.I3414S	0.980	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				79	0	0	71	8	10.1266
DST	0	genome.wustl.edu	37	6	56472644	56472644	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	56472644	56472644	A	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.6683	p.L2228R	0.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				120	0	0	111	32	22.3776
DST	0	genome.wustl.edu	37	6	56474002	56474002	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	56474002	56474002	A	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.5325	p.I1775M	0.998	pfam_Plectin_repeat,superfamily_ABC1_TM_dom,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				180	0	0	134	54	28.7234
PRIM2	0	genome.wustl.edu	37	6	57372352	57372352	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	57372352	57372352	T	G	SNP	PRIM2	ENST00000607273	human	ensembl	74_37	+1	known	missense	c.758	p.L253R	1.000	pfam_DNA_primase_lsu_euk/arc	pfam_DNA_primase_lsu_euk/arc	-	no_errors	PRIM2	HGNC	ENSG00000146143				44	0	0	44	4	8.33333
PHF3	0	genome.wustl.edu	37	6	64422746	64422746	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	64422746	64422746	T	A	SNP	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	missense	c.5262	p.F1754L	1.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482				129	0	0	97	15	13.3929
HUS1B	0	genome.wustl.edu	37	6	656331	656331	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	656331	656331	T	G	SNP	HUS1B	ENST00000380907	human	ensembl	74_37	-1	known	missense	c.614	p.K205T	0.333	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	-	no_errors	HUS1B	HGNC	ENSG00000188996				210	0	0	136	27	16.5644
OGFRL1	0	genome.wustl.edu	37	6	71998735	71998735	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	71998735	71998735	A	C	SNP	OGFRL1	ENST00000370435	human	ensembl	74_37	+1	known	missense	c.96	p.E32D	0.996	NULL	pfam_OGF_rcpt	-	no_errors	OGFRL1	HGNC	ENSG00000119900				8	0	0	10	4	28.5714
RIMS1	0	genome.wustl.edu	37	6	73108029	73108029	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	73108029	73108029	A	C	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.4697	p.K1566T	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				21	0	0	10	5	33.3333
KCNQ5	0	genome.wustl.edu	37	6	73904333	73904333	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	73904333	73904333	T	G	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.2025	p.D675E	0.998	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760				108	0	0	87	26	23.0088
KCNQ5	0	genome.wustl.edu	37	6	73904995	73904995	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	73904995	73904995	T	C	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.2687	p.F896S	0.997	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760				137	0	0	111	8	6.72269
RIOK1	0	genome.wustl.edu	37	6	7414622	7414622	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	7414622	7414622	A	C	SNP	RIOK1	ENST00000379834	human	ensembl	74_37	+1	known	missense	c.1595	p.K532T	1.000	pirsf_Ser/Thr_kinase_Rio1	pfam_RIO-like_kinase,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio1	-	no_errors	RIOK1	HGNC	ENSG00000124784				114	0	0	82	9	9.89011
TPBG	0	genome.wustl.edu	37	6	83075691	83075691	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	83075691	83075691	A	C	SNP	TPBG	ENST00000369750	human	ensembl	74_37	+1	known	missense	c.1013	p.N338T	0.009	pfam_Cys-rich_flank_reg_C,smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	TPBG	HGNC	ENSG00000146242				119	0	0	71	27	27.551
RARS2	0	genome.wustl.edu	37	6	88231202	88231202	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	88231202	88231202	A	C	SNP	RARS2	ENST00000369536	human	ensembl	74_37	-1	known	missense	c.1015	p.F339V	1.000	pfam_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS2	HGNC	ENSG00000146282				49	0	0	33	12	26.6667
MDN1	0	genome.wustl.edu	37	6	90368543	90368543	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	90368543	90368543	T	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.14807	p.Q4936L	0.013	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				211	0	0	127	30	19.1083
MDN1	0	genome.wustl.edu	37	6	90382309	90382309	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	90382309	90382309	T	G	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.13587	p.K4529N	0.010	superfamily_ARM-type_fold,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				73	0	0	70	7	9.09091
NYAP1	0	genome.wustl.edu	37	7	100084688	100084688	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	100084688	100084688	C	T	SNP	NYAP1	ENST00000423930	human	ensembl	74_37	+1	known	missense	c.313	p.L105F	0.092	NULL	NULL	-	no_errors	NYAP1	HGNC	ENSG00000166924				39	0	0	25	8	24.2424
FBXO24	0	genome.wustl.edu	37	7	100190480	100190480	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	100190480	100190480	A	C	SNP	FBXO24	ENST00000427939	human	ensembl	74_37	+1	known	missense	c.747	p.E249D	0.019	NULL	pfam_F-box_dom,pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom,pfscan_Reg_chr_condens	-	no_errors	FBXO24	HGNC	ENSG00000106336				55	0	0	27	5	15.625
MUC17	0	genome.wustl.edu	37	7	100680229	100680229	+	Silent	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	100680229	100680229	A	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.5532	p.A1844	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				387	0	0	267	74	21.7009
MUC17	0	genome.wustl.edu	37	7	100680882	100680882	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	100680882	100680882	A	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.6185	p.N2062T	0.109	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				258	1	0.3861	215	20	8.51064
MOGAT3	0	genome.wustl.edu	37	7	100841487	100841487	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	100841487	100841487	A	C	SNP	MOGAT3	ENST00000440203	human	ensembl	74_37	-1	known	missense	c.653	p.L218R	0.999	pfam_DAGAT	pfam_DAGAT	-	no_errors	MOGAT3	HGNC	ENSG00000106384				65	0	0	43	4	8.51064
LRWD1	0	genome.wustl.edu	37	7	102109080	102109080	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	102109080	102109080	C	T	SNP	LRWD1	ENST00000292616	human	ensembl	74_37	+1	known	silent	c.999	p.H333	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LRWD1	HGNC	ENSG00000161036				9	0	0	4	3	42.8571
FBXL13	0	genome.wustl.edu	37	7	102608482	102608482	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	102608482	102608482	G	A	SNP	FBXL13	ENST00000313221	human	ensembl	74_37	-1	known	missense	c.578	p.S193L	0.010	pfscan_F-box_dom	smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL13	HGNC	ENSG00000161040				65	0	0	51	4	7.27273
RELN	0	genome.wustl.edu	37	7	103185604	103185604	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	103185604	103185604	T	C	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.6490	p.K2164E	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				102	0	0	65	8	10.9589
COG5	0	genome.wustl.edu	37	7	107198467	107198467	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	107198467	107198467	T	G	SNP	COG5	ENST00000297135	human	ensembl	74_37	-1	known	missense	c.281	p.K94T	1.000	pfam_Cog5	pfam_Cog5	-	no_errors	COG5	HGNC	ENSG00000164597				68	0	0	45	5	10
LAMB1	0	genome.wustl.edu	37	7	107564421	107564421	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	107564421	107564421	A	C	SNP	LAMB1	ENST00000222399	human	ensembl	74_37	-1	known	missense	c.5336	p.V1779G	0.996	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Prefoldin,superfamily_t-SNARE,superfamily_P-loop_NTPase,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB1	HGNC	ENSG00000091136				103	0	0	90	8	8.16327
LAMB4	0	genome.wustl.edu	37	7	107720140	107720140	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	107720140	107720140	A	G	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.1793	p.F598S	1.000	pfscan_Laminin_IV	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128				52	0	0	39	7	15.2174
DOCK4	0	genome.wustl.edu	37	7	111509658	111509658	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	111509658	111509658	C	T	SNP	DOCK4	ENST00000428084	human	ensembl	74_37	-1	known	missense	c.2081	p.R694Q	0.835	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK4	HGNC	ENSG00000128512				52	0	0	28	3	9.67742
TFEC	0	genome.wustl.edu	37	7	115581990	115581990	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	115581990	115581990	T	G	SNP	TFEC	ENST00000265440	human	ensembl	74_37	-1	known	missense	c.620	p.K207T	1.000	NULL	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFEC	HGNC	ENSG00000105967				158	0	0	120	51	29.8246
CFTR	0	genome.wustl.edu	37	7	117235071	117235071	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	117235071	117235071	A	C	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.2578	p.I860L	0.659	superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626				60	0	0	39	16	29.0909
CTTNBP2	0	genome.wustl.edu	37	7	117431987	117431987	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	117431987	117431987	T	C	SNP	CTTNBP2	ENST00000160373	human	ensembl	74_37	-1	known	silent	c.1263	p.Q421	0.000	NULL	pfam_Cortactin-binding_p2_N,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CTTNBP2	HGNC	ENSG00000077063				192	0	0	153	23	13.0682
CPED1	0	genome.wustl.edu	37	7	120704342	120704342	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	120704342	120704342	A	T	SNP	CPED1	ENST00000310396	human	ensembl	74_37	+1	known	missense	c.591	p.L197F	1.000	NULL	NULL	-	no_errors	CPED1	HGNC	ENSG00000106034				45	0	0	50	5	9.09091
SLC13A1	0	genome.wustl.edu	37	7	122787232	122787232	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	122787232	122787232	A	C	SNP	SLC13A1	ENST00000194130	human	ensembl	74_37	-1	known	missense	c.793	p.F265V	1.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A1	HGNC	ENSG00000081800				31	0	0	30	9	23.0769
ASB15	0	genome.wustl.edu	37	7	123270123	123270123	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	123270123	123270123	A	C	SNP	ASB15	ENST00000275699	human	ensembl	74_37	+1	known	missense	c.1544	p.K515T	0.983	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB15	HGNC	ENSG00000146809				104	0	0	90	9	9.09091
CCDC136	0	genome.wustl.edu	37	7	128454771	128454771	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	128454771	128454771	T	C	SNP	CCDC136	ENST00000297788	human	ensembl	74_37	+1	known	missense	c.2843	p.V948A	0.556	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596				28	0	0	21	6	22.2222
TNPO3	0	genome.wustl.edu	37	7	128619046	128619046	+	Silent	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	128619046	128619046	T	A	SNP	TNPO3	ENST00000393245	human	ensembl	74_37	-1	known	silent	c.2154	p.L718	0.892	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC	ENSG00000064419				357	0	0	237	43	15.3571
TNPO3	0	genome.wustl.edu	37	7	128645196	128645196	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	128645196	128645196	T	C	SNP	TNPO3	ENST00000393245	human	ensembl	74_37	-1	known	silent	c.570	p.K190	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC	ENSG00000064419				134	0	0	83	8	8.79121
CEP41	0	genome.wustl.edu	37	7	130039931	130039931	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	130039931	130039931	T	G	SNP	CEP41	ENST00000223208	human	ensembl	74_37	-1	known	missense	c.922	p.K308Q	0.996	NULL	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	CEP41	HGNC	ENSG00000106477				104	0	0	76	21	21.6495
CHCHD3	0	genome.wustl.edu	37	7	132470307	132470307	+	RNA	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	132470307	132470307	T	A	SNP	CHCHD3	ENST00000476546	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHCHD3	HGNC	ENSG00000106554				19	0	0	6	4	40
AKR1B15	0	genome.wustl.edu	37	7	134253009	134253009	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	134253009	134253009	G	A	SNP	AKR1B15	ENST00000423958	human	ensembl	74_37	+1	known	missense	c.166	p.G56R	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1B15	HGNC	ENSG00000227471				142	0	0	97	31	24.2188
C7orf49	0	genome.wustl.edu	37	7	134853724	134853724	+	RNA	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	134853724	134853724	T	C	SNP	C7orf49	ENST00000459937	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	C7orf49	HGNC	ENSG00000122783				21	0	0	23	8	25.8065
DGKI	0	genome.wustl.edu	37	7	137270054	137270054	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	137270054	137270054	T	C	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	silent	c.1464	p.Q488	0.944	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680				93	0	0	67	24	26.3736
ATP6V0A4	0	genome.wustl.edu	37	7	138455994	138455994	+	RNA	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	138455994	138455994	T	C	SNP	ATP6V0A4	ENST00000483139	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATP6V0A4	HGNC	ENSG00000105929				169	0	0	123	27	18
TBXAS1	0	genome.wustl.edu	37	7	139572126	139572126	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	139572126	139572126	A	C	SNP	TBXAS1	ENST00000416849	human	ensembl	74_37	+1	known	missense	c.185	p.Q62P	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	TBXAS1	HGNC	ENSG00000059377				106	0	0	65	21	24.4186
MKRN1	0	genome.wustl.edu	37	7	140158984	140158984	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	140158984	140158984	T	C	SNP	MKRN1	ENST00000255977	human	ensembl	74_37	-1	known	silent	c.594	p.E198	0.669	NULL	pfam_Znf_CCCH,pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN1	HGNC	ENSG00000133606				168	0	0	126	18	12.5
SSPO	0	genome.wustl.edu	37	7	149475868	149475868	+	Splice_Site	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	149475868	149475868	A	C	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				29	0	0	25	6	19.3548
GIMAP6	0	genome.wustl.edu	37	7	150325584	150325584	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	150325584	150325584	T	G	SNP	GIMAP6	ENST00000328902	human	ensembl	74_37	-1	known	missense	c.102	p.E34D	0.000	superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP6	HGNC	ENSG00000133561				302	0	0	205	31	13.1356
ASB10	0	genome.wustl.edu	37	7	150883545	150883545	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	150883545	150883545	T	C	SNP	ASB10	ENST00000422024	human	ensembl	74_37	-1	known	missense	c.653	p.D218G	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB10	HGNC	ENSG00000146926				9	0	0	7	4	36.3636
FAM126A	0	genome.wustl.edu	37	7	22999995	22999995	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	22999995	22999995	T	G	SNP	FAM126A	ENST00000432176	human	ensembl	74_37	-1	known	missense	c.871	p.M291L	1.000	pfam_Hyccin	pfam_Hyccin	-	no_errors	FAM126A	HGNC	ENSG00000122591				155	0	0	119	7	5.55556
HOXA9	0	genome.wustl.edu	37	7	27204678	27204678	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	27204678	27204678	T	G	SNP	HOXA9	ENST00000343483	human	ensembl	74_37	-1	known	missense	c.399	p.K133N	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA9	HGNC	ENSG00000078399				42	0	0	21	5	19.2308
TAX1BP1	0	genome.wustl.edu	37	7	27832746	27832746	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	27832746	27832746	T	G	SNP	TAX1BP1	ENST00000396319	human	ensembl	74_37	+1	known	missense	c.1325	p.L442R	1.000	pfam_CoCoA	pfam_CoCoA	-	no_errors	TAX1BP1	HGNC	ENSG00000106052				46	0	0	41	7	14.5833
PPP1R17	0	genome.wustl.edu	37	7	31735091	31735091	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	31735091	31735091	T	G	SNP	PPP1R17	ENST00000342032	human	ensembl	74_37	+1	known	missense	c.91	p.S31A	1.000	NULL	NULL	-	no_errors	PPP1R17	HGNC	ENSG00000106341				81	0	0	69	19	21.5909
FAM183B	0	genome.wustl.edu	37	7	38725595	38725595	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	38725595	38725595	T	C	SNP	FAM183B	ENST00000409072	human	ensembl	74_37	-1	novel	missense	c.11	p.H4R	0.009	NULL	NULL	-	no_errors	FAM183B	HGNC	ENSG00000164556				56	0	0	51	7	12.069
GLI3	0	genome.wustl.edu	37	7	42005617	42005617	+	Silent	SNP	C	C	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	42005617	42005617	C	A	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	silent	c.3054	p.L1018	0.568	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				27	0	0	14	7	33.3333
GLI3	0	genome.wustl.edu	37	7	42005620	42005620	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	42005620	42005620	G	A	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	silent	c.3051	p.A1017	0.357	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				27	0	0	14	7	33.3333
MRPL32	0	genome.wustl.edu	37	7	42977040	42977040	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	42977040	42977040	A	T	SNP	MRPL32	ENST00000223324	human	ensembl	74_37	+1	known	missense	c.432	p.Q144H	0.001	NULL	pfam_Ribosomal_L32p,superfamily_Ribosomal_zn-bd	-	no_errors	MRPL32	HGNC	ENSG00000106591				69	0	0	42	12	22.2222
UBE2D4	0	genome.wustl.edu	37	7	43978042	43978042	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	43978042	43978042	T	C	SNP	UBE2D4	ENST00000222402	human	ensembl	74_37	+1	known	silent	c.37	p.L13	0.997	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2D4	HGNC	ENSG00000078967				135	0	0	90	10	10
CAMK2B	0	genome.wustl.edu	37	7	44260282	44260282	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	44260282	44260282	C	T	SNP	CAMK2B	ENST00000395749	human	ensembl	74_37	-1	known	silent	c.1701	p.S567	0.131	pfam_Ca/CaM-dep_prot_kinase-assoc	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2B	HGNC	ENSG00000058404				33	0	0	26	4	13.3333
H2AFV	0	genome.wustl.edu	37	7	44874131	44874131	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	44874131	44874131	A	G	SNP	H2AFV	ENST00000308153	human	ensembl	74_37	-1	known	missense	c.356	p.I119T	1.000	smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	H2AFV	HGNC	ENSG00000105968				43	0	0	39	7	15.2174
HUS1	0	genome.wustl.edu	37	7	48007476	48007476	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	48007476	48007476	T	G	SNP	HUS1	ENST00000258774	human	ensembl	74_37	-1	known	missense	c.687	p.E229D	0.413	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	-	no_errors	HUS1	HGNC	ENSG00000136273				83	0	0	76	13	14.6067
FOXK1	0	genome.wustl.edu	37	7	4800889	4800889	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	4800889	4800889	C	T	SNP	FOXK1	ENST00000328914	human	ensembl	74_37	+1	known	missense	c.1891	p.P631S	0.980	NULL	pfam_TF_fork_head,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_TF_fork_head,pfscan_FHA_dom,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXK1	HGNC	ENSG00000164916				52	0	0	19	12	38.7097
SUN3	0	genome.wustl.edu	37	7	48056918	48056918	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	48056918	48056918	T	C	SNP	SUN3	ENST00000297325	human	ensembl	74_37	-1	known	missense	c.229	p.K77E	0.007	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUN3	HGNC	ENSG00000164744				27	0	0	28	5	15.1515
ABCA13	0	genome.wustl.edu	37	7	48318068	48318068	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	48318068	48318068	T	G	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.7277	p.L2426R	0.003	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				105	0	0	61	19	23.75
ABCA13	0	genome.wustl.edu	37	7	48319207	48319207	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	48319207	48319207	A	C	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.8416	p.N2806H	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				78	0	0	78	6	7.14286
ZPBP	0	genome.wustl.edu	37	7	50057857	50057857	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	50057857	50057857	T	G	SNP	ZPBP	ENST00000046087	human	ensembl	74_37	-1	known	missense	c.762	p.E254D	0.269	pfam_Sp38-bd	pfam_Sp38-bd,pfscan_Ig-like_dom	-	no_errors	ZPBP	HGNC	ENSG00000042813				60	0	0	53	11	17.1875
WIPI2	0	genome.wustl.edu	37	7	5254322	5254322	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	5254322	5254322	A	C	SNP	WIPI2	ENST00000288828	human	ensembl	74_37	+1	known	missense	c.368	p.K123T	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WIPI2	HGNC	ENSG00000157954				161	0	0	116	8	6.45161
PMS2	0	genome.wustl.edu	37	7	6026899	6026899	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	6026899	6026899	A	C	SNP	PMS2	ENST00000265849	human	ensembl	74_37	-1	known	silent	c.1497	p.T499	0.000	NULL	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512				135	0	0	76	35	31.5315
USP42	0	genome.wustl.edu	37	7	6193751	6193751	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	6193751	6193751	A	G	SNP	USP42	ENST00000306177	human	ensembl	74_37	+1	known	missense	c.2566	p.S856G	0.383	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP42	HGNC	ENSG00000106346				56	0	0	34	9	20.9302
STAG3L4	0	genome.wustl.edu	37	7	66773968	66773968	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	66773968	66773968	A	C	SNP	STAG3L4	ENST00000416602	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610				108	0	0	66	21	24.1379
TMEM60	0	genome.wustl.edu	37	7	77423463	77423463	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	77423463	77423463	T	G	SNP	TMEM60	ENST00000257663	human	ensembl	74_37	-1	known	missense	c.228	p.K76N	1.000	NULL	pfam_TM_Fragile-X-F-assoc	-	no_errors	TMEM60	HGNC	ENSG00000135211				116	0	0	99	22	18.1818
PCLO	0	genome.wustl.edu	37	7	82785475	82785475	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	82785475	82785475	T	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.482	p.N161T	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				66	0	0	33	19	36.5385
CROT	0	genome.wustl.edu	37	7	87022280	87022280	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	87022280	87022280	T	G	SNP	CROT	ENST00000331536	human	ensembl	74_37	+1	known	missense	c.1615	p.F539V	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CROT	HGNC	ENSG00000005469				210	0	0	129	46	26.2857
ABCB4	0	genome.wustl.edu	37	7	87072685	87072685	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	87072685	87072685	T	C	SNP	ABCB4	ENST00000265723	human	ensembl	74_37	-1	known	missense	c.1306	p.S436G	1.000	pfam_ABC_transporter-like,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB4	HGNC	ENSG00000005471				194	0	0	148	49	24.8731
ZNF804B	0	genome.wustl.edu	37	7	88962900	88962900	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	88962900	88962900	C	A	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.604	p.Q202K	0.929	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348				87	0	0	67	21	23.8636
SAMD9	0	genome.wustl.edu	37	7	92733452	92733452	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	92733452	92733452	T	C	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	silent	c.1959	p.E653	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413				133	0	0	113	6	5.04202
TAC1	0	genome.wustl.edu	37	7	97362037	97362037	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	97362037	97362037	A	C	SNP	TAC1	ENST00000319273	human	ensembl	74_37	+1	known	missense	c.113	p.D38A	1.000	prints_Protachykinin	smart_Tachykinin,prints_Protachykinin	-	no_errors	TAC1	HGNC	ENSG00000006128				77	0	0	66	11	14.2857
TAC1	0	genome.wustl.edu	37	7	97363046	97363046	+	Silent	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	97363046	97363046	G	A	SNP	TAC1	ENST00000319273	human	ensembl	74_37	+1	known	silent	c.135	p.P45	0.050	prints_Protachykinin	smart_Tachykinin,prints_Protachykinin	-	no_errors	TAC1	HGNC	ENSG00000006128				87	0	0	75	18	19.3548
LMTK2	0	genome.wustl.edu	37	7	97820058	97820058	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	97820058	97820058	T	G	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	silent	c.1017	p.L339	0.938	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715				265	0	0	207	24	10.3896
LMTK2	0	genome.wustl.edu	37	7	97821396	97821396	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	97821396	97821396	T	G	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	missense	c.1619	p.F540C	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715				97	0	0	79	10	11.236
LMTK2	0	genome.wustl.edu	37	7	97821440	97821440	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	7	97821440	97821440	T	G	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	missense	c.1663	p.L555V	0.025	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715				92	0	0	68	9	11.6883
ATP6V1C1	0	genome.wustl.edu	37	8	104065044	104065044	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	104065044	104065044	A	G	SNP	ATP6V1C1	ENST00000395862	human	ensembl	74_37	+1	known	missense	c.467	p.K156R	1.000	pfam_ATPase_V1-cplx_csu	pfam_ATPase_V1-cplx_csu	-	no_errors	ATP6V1C1	HGNC	ENSG00000155097				58	0	0	48	14	22.5806
KCNV1	0	genome.wustl.edu	37	8	110980514	110980514	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	110980514	110980514	A	C	SNP	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	missense	c.1306	p.F436V	1.000	prints_K_chnl_volt-dep_Kv8	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794				102	0	0	89	12	11.8812
MTBP	0	genome.wustl.edu	37	8	121554271	121554271	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	121554271	121554271	A	C	SNP	MTBP	ENST00000519841	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTBP	HGNC	ENSG00000172167				59	0	0	29	7	19.4444
ATAD2	0	genome.wustl.edu	37	8	124357232	124357232	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	124357232	124357232	T	C	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	silent	c.2610	p.G870	0.472	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802				186	0	0	149	12	7.45342
ADCY8	0	genome.wustl.edu	37	8	131795960	131795960	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	131795960	131795960	A	G	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.3245	p.F1082S	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				35	0	0	43	6	12.2449
ADCY8	0	genome.wustl.edu	37	8	131796002	131796002	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	131796002	131796002	A	C	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.3203	p.L1068R	0.986	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				47	0	0	45	13	22.4138
EFR3A	0	genome.wustl.edu	37	8	132991146	132991146	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	132991146	132991146	T	C	SNP	EFR3A	ENST00000254624	human	ensembl	74_37	+1	known	missense	c.1379	p.F460S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	EFR3A	HGNC	ENSG00000132294				80	0	0	60	28	31.8182
KCNK9	0	genome.wustl.edu	37	8	140631316	140631316	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	140631316	140631316	C	T	SNP	KCNK9	ENST00000303015	human	ensembl	74_37	-1	known	missense	c.310	p.D104N	1.000	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TASK,prints_KCNK9,prints_2pore_dom_K_chnl	-	no_errors	KCNK9	HGNC	ENSG00000169427				35	0	0	21	15	41.6667
ZNF251	0	genome.wustl.edu	37	8	145947158	145947158	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	145947158	145947158	T	G	SNP	ZNF251	ENST00000292562	human	ensembl	74_37	-1	known	missense	c.1887	p.K629N	0.955	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF251	HGNC	ENSG00000198169				64	0	0	37	6	13.9535
MSR1	0	genome.wustl.edu	37	8	16025998	16025998	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	16025998	16025998	T	G	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	missense	c.599	p.K200T	0.002	superfamily_STAT_TF_coiled-coil	pfam_SRCR,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_SRCR,pfscan_SRCR	-	no_errors	MSR1	HGNC	ENSG00000038945				59	0	0	46	13	22.0339
PCM1	0	genome.wustl.edu	37	8	17851033	17851033	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	17851033	17851033	A	G	SNP	PCM1	ENST00000325083	human	ensembl	74_37	+1	known	missense	c.4732	p.S1578G	0.223	NULL	NULL	-	no_errors	PCM1	HGNC	ENSG00000078674				9	0	0	14	5	26.3158
REEP4	0	genome.wustl.edu	37	8	21997518	21997518	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	21997518	21997518	A	C	SNP	REEP4	ENST00000306306	human	ensembl	74_37	-1	known	silent	c.261	p.L87	0.997	pfam_TB2_DP1_HVA22	pfam_TB2_DP1_HVA22	-	no_errors	REEP4	HGNC	ENSG00000168476				19	0	0	13	4	23.5294
PPP3CC	0	genome.wustl.edu	37	8	22380024	22380024	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	22380024	22380024	T	G	SNP	PPP3CC	ENST00000240139	human	ensembl	74_37	+1	known	missense	c.791	p.F264C	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CC	HGNC	ENSG00000120910				50	0	0	39	6	13.3333
ENTPD4	0	genome.wustl.edu	37	8	23299118	23299118	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	23299118	23299118	T	G	SNP	ENTPD4	ENST00000358689	human	ensembl	74_37	-1	known	missense	c.846	p.E282D	1.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD4	HGNC	ENSG00000197217				116	1	0.854701	70	9	11.3924
EBF2	0	genome.wustl.edu	37	8	25766067	25766067	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	25766067	25766067	A	C	SNP	EBF2	ENST00000520164	human	ensembl	74_37	-1	known	missense	c.556	p.F186V	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF2	HGNC	ENSG00000221818				46	0	0	36	4	10
NUGGC	0	genome.wustl.edu	37	8	27888776	27888776	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	27888776	27888776	T	G	SNP	NUGGC	ENST00000341513	human	ensembl	74_37	-1	known	missense	c.1892	p.N631T	0.005	NULL	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	NUGGC	HGNC	ENSG00000189233				173	0	0	112	41	26.7974
RNF122	0	genome.wustl.edu	37	8	33408905	33408905	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	33408905	33408905	T	G	SNP	RNF122	ENST00000256257	human	ensembl	74_37	-1	known	missense	c.185	p.K62T	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF122	HGNC	ENSG00000133874				85	0	0	62	6	8.82353
KCNU1	0	genome.wustl.edu	37	8	36763254	36763254	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	36763254	36763254	T	C	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	missense	c.2038	p.S680P	0.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262				105	0	0	72	5	6.49351
ANK1	0	genome.wustl.edu	37	8	41554227	41554227	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	41554227	41554227	T	G	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2702	p.N901T	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				43	0	0	28	2	6.66667
AP3M2	0	genome.wustl.edu	37	8	42019931	42019931	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	42019931	42019931	A	C	SNP	AP3M2	ENST00000174653	human	ensembl	74_37	+1	known	missense	c.578	p.K193T	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP3M2	HGNC	ENSG00000070718				227	0	0	175	73	29.4355
THAP1	0	genome.wustl.edu	37	8	42693377	42693377	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	42693377	42693377	G	A	SNP	THAP1	ENST00000254250	human	ensembl	74_37	-1	known	nonsense	c.370	p.Q124*	0.966	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP1	HGNC	ENSG00000131931				289	0	0	246	14	5.38462
PRKDC	0	genome.wustl.edu	37	8	48762039	48762039	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	48762039	48762039	A	G	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.7028	p.L2343P	0.454	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				81	0	0	54	17	23.9437
PRKDC	0	genome.wustl.edu	37	8	48809800	48809800	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	48809800	48809800	T	C	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.3519	p.L1173	0.006	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				202	0	0	159	23	12.6374
RP1	0	genome.wustl.edu	37	8	55542190	55542190	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	55542190	55542190	A	C	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.5748	p.Q1916H	0.989	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				119	0	0	94	24	20.339
LYN	0	genome.wustl.edu	37	8	56879353	56879353	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	56879353	56879353	A	C	SNP	LYN	ENST00000519728	human	ensembl	74_37	+1	known	missense	c.870	p.E290D	0.981	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LYN	HGNC	ENSG00000254087				73	0	0	49	14	22.2222
ASPH	0	genome.wustl.edu	37	8	62550538	62550538	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	62550538	62550538	T	C	SNP	ASPH	ENST00000379454	human	ensembl	74_37	-1	known	missense	c.857	p.N286S	0.341	pfam_Asp-B-hydro/Triadin_dom	pfam_Asp-B-hydro/Triadin_dom,pfam_Asp_Arg_b-Hydrxlase,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ASPH	HGNC	ENSG00000198363				27	0	0	26	5	16.129
AGPAT5	0	genome.wustl.edu	37	8	6614805	6614805	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	6614805	6614805	T	G	SNP	AGPAT5	ENST00000285518	human	ensembl	74_37	+1	known	missense	c.991	p.L331V	0.104	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT5	HGNC	ENSG00000155189				85	0	0	82	6	6.81818
TRIM55	0	genome.wustl.edu	37	8	67067892	67067892	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	67067892	67067892	T	G	SNP	TRIM55	ENST00000276573	human	ensembl	74_37	+1	known	missense	c.1559	p.L520R	1.000	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM55	HGNC	ENSG00000147573				70	0	0	50	11	18.0328
ARFGEF1	0	genome.wustl.edu	37	8	68139716	68139716	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	68139716	68139716	A	T	SNP	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	missense	c.3709	p.L1237I	1.000	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777				87	0	0	86	8	8.51064
NCOA2	0	genome.wustl.edu	37	8	71082536	71082536	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	71082536	71082536	T	G	SNP	NCOA2	ENST00000452400	human	ensembl	74_37	-1	known	silent	c.442	p.R148	1.000	pfam_PAS_fold,superfamily_PAS,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA2	HGNC	ENSG00000140396				22	0	0	16	5	23.8095
EYA1	0	genome.wustl.edu	37	8	72267124	72267124	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	72267124	72267124	A	G	SNP	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	missense	c.17	p.L6P	1.000	NULL	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313				172	0	0	155	11	6.62651
UBE2W	0	genome.wustl.edu	37	8	74742629	74742629	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	74742629	74742629	T	G	SNP	UBE2W	ENST00000419880	human	ensembl	74_37	-1	known	missense	c.214	p.N72H	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2W	HGNC	ENSG00000104343				91	0	0	64	24	27.2727
ZFHX4	0	genome.wustl.edu	37	8	77617339	77617339	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	77617339	77617339	A	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.1016	p.K339T	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				108	0	0	71	22	23.6559
CNGB3	0	genome.wustl.edu	37	8	87656904	87656904	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	87656904	87656904	A	C	SNP	CNGB3	ENST00000320005	human	ensembl	74_37	-1	known	missense	c.1001	p.F334C	1.000	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB3	HGNC	ENSG00000170289				55	0	0	39	9	18.75
GDF6	0	genome.wustl.edu	37	8	97172781	97172781	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	8	97172781	97172781	T	G	SNP	GDF6	ENST00000287020	human	ensembl	74_37	-1	known	missense	c.140	p.K47T	1.000	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466				163	0	0	68	20	22.7273
FOXE1	0	genome.wustl.edu	37	9	100617166	100617166	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	100617166	100617166	T	G	SNP	FOXE1	ENST00000375123	human	ensembl	74_37	+1	known	missense	c.970	p.F324V	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXE1	HGNC	ENSG00000178919				13	0	0	5	3	37.5
COL15A1	0	genome.wustl.edu	37	9	101810103	101810103	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	101810103	101810103	T	C	SNP	COL15A1	ENST00000375001	human	ensembl	74_37	+1	known	silent	c.2715	p.F905	0.986	pfam_Collagen,superfamily_C-type_lectin_fold	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291				242	0	0	189	28	12.9032
SVEP1	0	genome.wustl.edu	37	9	113220835	113220835	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	113220835	113220835	A	C	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.3492	p.S1164R	1.000	NULL	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				16	0	0	11	5	31.25
ZNF883	0	genome.wustl.edu	37	9	115759766	115759766	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	115759766	115759766	A	C	SNP	ZNF883	ENST00000427548	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.545	-	-	-	no_errors	ZNF883	HGNC	ENSG00000228623				110	0	0	107	7	6.14035
ZNF883	0	genome.wustl.edu	37	9	115760586	115760586	+	RNA	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	115760586	115760586	C	T	SNP	ZNF883	ENST00000427548	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.196	-	-	-	no_errors	ZNF883	HGNC	ENSG00000228623				38	0	0	34	15	30.6122
ZFP37	0	genome.wustl.edu	37	9	115806455	115806455	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	115806455	115806455	T	G	SNP	ZFP37	ENST00000553380	human	ensembl	74_37	-1	known	missense	c.488	p.K163T	0.187	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP37	HGNC	ENSG00000136866				116	0	0	76	31	28.972
PAPPA	0	genome.wustl.edu	37	9	119115949	119115949	+	Silent	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	119115949	119115949	A	C	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	silent	c.4224	p.G1408	0.741	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				129	0	0	114	16	12.3077
GSN	0	genome.wustl.edu	37	9	124079367	124079367	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	124079367	124079367	T	C	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	missense	c.910	p.S304P	1.000	smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180				145	0	0	82	28	25.4545
NUP214	0	genome.wustl.edu	37	9	134016018	134016018	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	134016018	134016018	T	G	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.1215	p.N405K	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				88	0	0	73	13	15.1163
NUP214	0	genome.wustl.edu	37	9	134038401	134038401	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	134038401	134038401	A	G	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.2567	p.E856G	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				79	0	0	57	13	18.5714
SETX	0	genome.wustl.edu	37	9	135144872	135144872	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	135144872	135144872	A	C	SNP	SETX	ENST00000372169	human	ensembl	74_37	-1	known	missense	c.7292	p.L2431R	0.001	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	SETX	HGNC	ENSG00000107290				86	0	0	63	13	17.1053
TTF1	0	genome.wustl.edu	37	9	135266034	135266034	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	135266034	135266034	T	G	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	missense	c.2172	p.E724D	1.000	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482				183	0	0	113	51	31.0976
GFI1B	0	genome.wustl.edu	37	9	135865169	135865169	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	135865169	135865169	A	G	SNP	GFI1B	ENST00000339463	human	ensembl	74_37	+1	known	missense	c.689	p.K230R	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GFI1B	HGNC	ENSG00000165702				53	0	0	41	4	8.88889
MED22	0	genome.wustl.edu	37	9	136208461	136208461	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	136208461	136208461	A	G	SNP	MED22	ENST00000343730	human	ensembl	74_37	-1	known	missense	c.497	p.L166P	0.998	NULL	pfam_Mediator_Med22	-	no_errors	MED22	HGNC	ENSG00000148297				49	0	0	21	2	8.69565
BRD3	0	genome.wustl.edu	37	9	136906979	136906979	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	136906979	136906979	G	A	SNP	BRD3	ENST00000303407	human	ensembl	74_37	-1	known	missense	c.1310	p.A437V	0.109	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD3	HGNC	ENSG00000169925				30	0	0	13	10	43.4783
PNPLA7	0	genome.wustl.edu	37	9	140441763	140441763	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	140441763	140441763	A	C	SNP	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	missense	c.191	p.F64C	0.000	NULL	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653				172	0	0	95	29	23.3871
BNC2	0	genome.wustl.edu	37	9	16436973	16436973	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	16436973	16436973	T	C	SNP	BNC2	ENST00000380672	human	ensembl	74_37	-1	known	missense	c.1219	p.N407D	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068				91	0	0	55	7	11.2903
BNC2	0	genome.wustl.edu	37	9	16738377	16738377	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	16738377	16738377	A	C	SNP	BNC2	ENST00000380672	human	ensembl	74_37	-1	known	missense	c.110	p.V37G	0.010	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068				44	0	0	35	4	10.2564
PLIN2	0	genome.wustl.edu	37	9	19120914	19120914	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	19120914	19120914	C	T	SNP	PLIN2	ENST00000276914	human	ensembl	74_37	-1	known	missense	c.559	p.V187I	1.000	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN2	HGNC	ENSG00000147872				165	0	0	120	14	10.4478
FOCAD	0	genome.wustl.edu	37	9	20995574	20995574	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	20995574	20995574	A	G	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	silent	c.5352	p.R1784	0.988	pfam_DUF3028	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				102	0	0	72	13	15.2941
FOCAD	0	genome.wustl.edu	37	9	20995592	20995592	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	20995592	20995592	G	T	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	missense	c.5370	p.K1790N	1.000	pfam_DUF3028	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				104	0	0	59	12	16.9014
IFNW1	0	genome.wustl.edu	37	9	21141068	21141068	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	21141068	21141068	T	C	SNP	IFNW1	ENST00000380229	human	ensembl	74_37	-1	known	missense	c.502	p.R168G	0.641	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNW1	HGNC	ENSG00000177047				91	0	0	110	7	5.98291
KIAA0020	0	genome.wustl.edu	37	9	2811528	2811528	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	2811528	2811528	A	G	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	silent	c.1468	p.L490	0.506	pfam_CPL,superfamily_ARM-type_fold,pfscan_Pumilio_RNA-bd_rpt	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608				154	0	0	124	24	16.2162
NDUFB6	0	genome.wustl.edu	37	9	32558948	32558948	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	32558948	32558948	T	G	SNP	NDUFB6	ENST00000379847	human	ensembl	74_37	-1	known	missense	c.278	p.K93T	0.989	pfam_NADH_DH_b-subcmplx_su6	pfam_NADH_DH_b-subcmplx_su6	-	no_errors	NDUFB6	HGNC	ENSG00000165264				112	0	0	85	7	7.6087
AQP3	0	genome.wustl.edu	37	9	33443820	33443820	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	33443820	33443820	T	G	SNP	AQP3	ENST00000297991	human	ensembl	74_37	-1	known	missense	c.179	p.N60T	1.000	pfam_MIP,superfamily_Aquaporin-like,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_MIP	-	no_errors	AQP3	HGNC	ENSG00000165272				44	0	0	24	6	20
UBAP2	0	genome.wustl.edu	37	9	33953371	33953371	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	33953371	33953371	A	G	SNP	UBAP2	ENST00000360802	human	ensembl	74_37	-1	known	missense	c.968	p.L323P	1.000	NULL	pfam_DUF3697_Uba2,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP2	HGNC	ENSG00000137073				50	0	0	40	7	14.8936
DNAI1	0	genome.wustl.edu	37	9	34491532	34491532	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	34491532	34491532	T	G	SNP	DNAI1	ENST00000242317	human	ensembl	74_37	+1	known	missense	c.661	p.F221V	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI1	HGNC	ENSG00000122735				70	0	0	54	10	15.625
TESK1	0	genome.wustl.edu	37	9	35607466	35607466	+	RNA	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	35607466	35607466	A	G	SNP	TESK1	ENST00000463897	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TESK1	HGNC	ENSG00000107140				70	0	0	47	20	29.8507
SPAG8	0	genome.wustl.edu	37	9	35809798	35809798	+	RNA	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	35809798	35809798	A	C	SNP	SPAG8	ENST00000489063	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.092	-	-	-	no_errors	SPAG8	HGNC	ENSG00000137098				66	0	0	34	15	30.6122
FBXO10	0	genome.wustl.edu	37	9	37518122	37518122	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	37518122	37518122	T	C	SNP	FBXO10	ENST00000432825	human	ensembl	74_37	-1	known	silent	c.2514	p.K838	1.000	superfamily_Pectin_lyase_fold/virulence,smart_PbH1	pfam_F-box_dom,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom,smart_F-box_dom,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,pfscan_F-box_dom,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO10	HGNC	ENSG00000147912				77	0	0	42	10	19.2308
SLC25A51	0	genome.wustl.edu	37	9	37888453	37888453	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	37888453	37888453	T	G	SNP	SLC25A51	ENST00000242275	human	ensembl	74_37	-1	known	missense	c.95	p.K32T	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A51	HGNC	ENSG00000122696				172	0	0	134	10	6.94444
SPATA31A6	0	genome.wustl.edu	37	9	43628663	43628663	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	43628663	43628663	C	T	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	silent	c.279	p.E93	0.000	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775				139	0	0	128	17	11.7241
CNTNAP3B	0	genome.wustl.edu	37	9	43844248	43844248	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	43844248	43844248	T	G	SNP	CNTNAP3B	ENST00000377564	human	ensembl	74_37	+1	known	missense	c.1582	p.L528V	0.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3B	HGNC	ENSG00000154529				42	0	0	23	6	20.6897
SLC1A1	0	genome.wustl.edu	37	9	4490700	4490700	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	4490700	4490700	A	C	SNP	SLC1A1	ENST00000262352	human	ensembl	74_37	+1	known	missense	c.21	p.K7N	0.992	NULL	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A1	HGNC	ENSG00000106688				26	0	0	19	8	29.6296
CDC37L1	0	genome.wustl.edu	37	9	4685004	4685004	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	4685004	4685004	A	G	SNP	CDC37L1	ENST00000381854	human	ensembl	74_37	+1	known	missense	c.260	p.E87G	1.000	NULL	pfam_Cdc37_Hsp90-bd	-	no_errors	CDC37L1	HGNC	ENSG00000106993				90	0	0	73	8	9.87654
RLN1	0	genome.wustl.edu	37	9	5335303	5335303	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	5335303	5335303	T	G	SNP	RLN1	ENST00000223862	human	ensembl	74_37	-1	known	missense	c.506	p.E169A	0.021	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Insulin_family	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Relaxin,prints_Insulin_family	-	no_errors	RLN1	HGNC	ENSG00000107018				85	0	0	50	15	23.0769
KIAA1432	0	genome.wustl.edu	37	9	5747306	5747306	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	5747306	5747306	A	C	SNP	KIAA1432	ENST00000418622	human	ensembl	74_37	+1	known	missense	c.1016	p.N339T	1.000	NULL	pfam_Ribosome_control_1,superfamily_WD40_repeat_dom	-	no_errors	KIAA1432	HGNC	ENSG00000107036				74	0	0	74	5	6.32911
FAM189A2	0	genome.wustl.edu	37	9	71992295	71992295	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	71992295	71992295	T	A	SNP	FAM189A2	ENST00000257515	human	ensembl	74_37	+1	known	missense	c.262	p.F88I	1.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	FAM189A2	HGNC	ENSG00000135063				88	0	0	58	11	15.942
APBA1	0	genome.wustl.edu	37	9	72132044	72132044	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	72132044	72132044	T	C	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	missense	c.83	p.D28G	1.000	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282				11	0	0	8	3	27.2727
VPS13A	0	genome.wustl.edu	37	9	79936645	79936645	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	79936645	79936645	T	C	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.5813	p.L1938P	0.971	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				75	0	0	42	19	31.1475
VPS13A	0	genome.wustl.edu	37	9	79954519	79954519	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	79954519	79954519	A	C	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.6466	p.K2156Q	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				30	0	0	18	5	21.7391
TLE4	0	genome.wustl.edu	37	9	82336771	82336771	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	82336771	82336771	C	T	SNP	TLE4	ENST00000376520	human	ensembl	74_37	+1	known	missense	c.2050	p.R684W	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE4	HGNC	ENSG00000106829				82	0	0	50	8	13.7931
PTPRD	0	genome.wustl.edu	37	9	8338943	8338943	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	8338943	8338943	T	G	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.5358	p.E1786D	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707				124	0	0	94	6	6
TLE1	0	genome.wustl.edu	37	9	84230907	84230907	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	84230907	84230907	T	C	SNP	TLE1	ENST00000376499	human	ensembl	74_37	-1	known	missense	c.908	p.E303G	1.000	NULL	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE1	HGNC	ENSG00000196781				80	0	0	76	6	7.31707
PTPRD	0	genome.wustl.edu	37	9	8636748	8636748	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	8636748	8636748	T	G	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.161	p.K54T	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707				120	0	0	86	31	26.4957
CTSL3P	0	genome.wustl.edu	37	9	90388453	90388453	+	RNA	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	90388453	90388453	T	C	SNP	CTSL3P	ENST00000354530	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTSL3P	HGNC	ENSG00000188029				94	0	0	59	24	28.9157
NFIL3	0	genome.wustl.edu	37	9	94172426	94172426	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	94172426	94172426	T	G	SNP	NFIL3	ENST00000297689	human	ensembl	74_37	-1	known	missense	c.591	p.E197D	0.019	pfam_Vert_IL3-reg_TF,pirsf_TF_bZIP_E4BP4	pfam_Vert_IL3-reg_TF,pfam_bZIP,smart_bZIP,pirsf_TF_bZIP_E4BP4,pfscan_bZIP	-	no_errors	NFIL3	HGNC	ENSG00000165030				70	0	0	62	11	15.0685
PTCH1	0	genome.wustl.edu	37	9	98231052	98231052	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	98231052	98231052	A	G	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	missense	c.2231	p.L744P	1.000	pfam_Patched,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920				206	0	0	172	18	9.47368
PTCH1	0	genome.wustl.edu	37	9	98244295	98244295	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	98244295	98244295	T	G	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	missense	c.682	p.I228L	1.000	tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920				61	0	0	49	10	16.9492
CTSV	0	genome.wustl.edu	37	9	99797109	99797109	+	Silent	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	9	99797109	99797109	T	C	SNP	CTSV	ENST00000259470	human	ensembl	74_37	-1	known	silent	c.804	p.P268	0.001	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSV	HGNC	ENSG00000136943				87	0	0	58	14	19.4444
TAF7L	0	genome.wustl.edu	37	X	100536734	100536734	+	Nonsense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	100536734	100536734	T	A	SNP	TAF7L	ENST00000372907	human	ensembl	74_37	-1	known	nonsense	c.694	p.K232*	0.997	pfam_TAFII55_prot_cons_reg	pfam_TAFII55_prot_cons_reg	-	no_errors	TAF7L	HGNC	ENSG00000102387				70	0	0	65	14	17.7215
GPRASP2	0	genome.wustl.edu	37	X	101970070	101970070	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	101970070	101970070	A	G	SNP	GPRASP2	ENST00000332262	human	ensembl	74_37	+1	known	silent	c.273	p.Q91	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP2	HGNC	ENSG00000158301				107	0	0	51	60	54.0541
GLRA4	0	genome.wustl.edu	37	X	102979114	102979114	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	102979114	102979114	T	G	SNP	GLRA4	ENST00000372617	human	ensembl	74_37	-1	known	missense	c.386	p.K129T	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA4	HGNC	ENSG00000188828				127	0	0	56	53	48.6239
NRK	0	genome.wustl.edu	37	X	105178289	105178289	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	105178289	105178289	T	C	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	missense	c.3355	p.S1119P	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572				50	0	0	23	21	47.7273
MUM1L1	0	genome.wustl.edu	37	X	105450021	105450021	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	105450021	105450021	T	A	SNP	MUM1L1	ENST00000337685	human	ensembl	74_37	+1	known	missense	c.596	p.L199H	0.027	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MUM1L1	HGNC	ENSG00000157502				16	0	0	13	4	23.5294
MID2	0	genome.wustl.edu	37	X	107167580	107167580	+	Nonsense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	107167580	107167580	T	A	SNP	MID2	ENST00000262843	human	ensembl	74_37	+1	known	nonsense	c.1443	p.Y481*	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID2	HGNC	ENSG00000080561				50	0	0	14	29	67.4419
TEX13B	0	genome.wustl.edu	37	X	107225022	107225022	+	Silent	SNP	C	C	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	107225022	107225022	C	T	SNP	TEX13B	ENST00000302917	human	ensembl	74_37	-1	known	silent	c.336	p.T112	0.001	NULL	NULL	-	no_errors	TEX13B	HGNC	ENSG00000170925				130	0	0	57	57	50
COL4A5	0	genome.wustl.edu	37	X	107863537	107863537	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	107863537	107863537	T	A	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	missense	c.2558	p.L853H	0.988	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153				42	0	0	48	5	9.43396
CAPN6	0	genome.wustl.edu	37	X	110489860	110489860	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	110489860	110489860	T	C	SNP	CAPN6	ENST00000324068	human	ensembl	74_37	-1	known	missense	c.1871	p.K624R	0.992	superfamily_C2_dom	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN6	HGNC	ENSG00000077274				65	0	0	26	36	58.0645
ATP1B4	0	genome.wustl.edu	37	X	119509228	119509228	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	119509228	119509228	T	G	SNP	ATP1B4	ENST00000218008	human	ensembl	74_37	+1	known	silent	c.564	p.G188	0.906	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP1B4	HGNC	ENSG00000101892				74	0	0	40	25	38.4615
GLUD2	0	genome.wustl.edu	37	X	120182312	120182312	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	120182312	120182312	A	T	SNP	GLUD2	ENST00000328078	human	ensembl	74_37	+1	known	missense	c.774	p.K258N	0.998	prints_Glu/Leu/Phe/Val_DH	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890				66	0	0	24	35	59.322
GRIA3	0	genome.wustl.edu	37	X	122616702	122616702	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	122616702	122616702	T	C	SNP	GRIA3	ENST00000264357	human	ensembl	74_37	+1	known	missense	c.2492	p.L831P	1.000	pfam_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA3	HGNC	ENSG00000125675				96	0	0	39	36	48
TENM1	0	genome.wustl.edu	37	X	123680875	123680875	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	123680875	123680875	A	G	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.2500	p.C834R	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694				50	0	0	47	5	9.61538
FAM45B	0	genome.wustl.edu	37	X	129629644	129629644	+	RNA	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	129629644	129629644	T	G	SNP	FAM45B	ENST00000592932	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAM45B	HGNC	ENSG00000221930				74	0	0	73	7	8.75
CRLF2	0	genome.wustl.edu	37	X	1317546	1317546	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	1317546	1317546	T	G	SNP	CRLF2	ENST00000381567	human	ensembl	74_37	-1	known	missense	c.519	p.E173D	0.002	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CRLF2	HGNC	ENSG00000205755				63	0	0	40	13	24.5283
USP26	0	genome.wustl.edu	37	X	132160803	132160803	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	132160803	132160803	A	G	SNP	USP26	ENST00000370832	human	ensembl	74_37	-1	known	silent	c.1446	p.T482	0.001	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588				134	0	0	58	78	57.3529
GPR112	0	genome.wustl.edu	37	X	135430503	135430503	+	Silent	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	135430503	135430503	T	G	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	silent	c.4638	p.G1546	0.001	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920				105	0	0	47	46	49.4624
GPR112	0	genome.wustl.edu	37	X	135488095	135488095	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	135488095	135488095	T	G	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	missense	c.8899	p.F2967V	0.869	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920				123	0	0	65	71	52.2059
CSF2RA	0	genome.wustl.edu	37	X	1419418	1419418	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	1419418	1419418	A	G	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	missense	c.845	p.N282S	0.005	superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223				114	0	0	97	16	14.1593
AFF2	0	genome.wustl.edu	37	X	148037396	148037396	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	148037396	148037396	A	G	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	silent	c.1821	p.T607	0.998	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				99	0	0	71	29	29
MAMLD1	0	genome.wustl.edu	37	X	149671655	149671655	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	149671655	149671655	A	G	SNP	MAMLD1	ENST00000262858	human	ensembl	74_37	+1	known	missense	c.2152	p.S718G	1.000	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619				72	0	0	66	4	5.71429
ASB9	0	genome.wustl.edu	37	X	15268632	15268632	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	15268632	15268632	T	G	SNP	ASB9	ENST00000380488	human	ensembl	74_37	-1	known	missense	c.488	p.K163T	0.003	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB9	HGNC	ENSG00000102048				62	0	0	23	32	58.1818
OPN1MW	0	genome.wustl.edu	37	X	153461452	153461452	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	153461452	153461452	A	C	SNP	OPN1MW	ENST00000369935	human	ensembl	74_37	+1	known	missense	c.1016	p.K339T	1.000	pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_Opsin_red/grn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_Opsin_red/grn,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	OPN1MW	HGNC	ENSG00000147380				33	0	0	20	6	23.0769
TMLHE	0	genome.wustl.edu	37	X	154736703	154736703	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	154736703	154736703	T	G	SNP	TMLHE	ENST00000334398	human	ensembl	74_37	-1	known	missense	c.851	p.K284T	0.839	pfam_Taurine_dOase,tigrfam_Trimethyllysine_dOase	pfam_Taurine_dOase,pfam_DUF971,tigrfam_Trimethyllysine_dOase	-	no_errors	TMLHE	HGNC	ENSG00000185973				103	0	0	78	11	12.3596
SCML1	0	genome.wustl.edu	37	X	17771450	17771450	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	17771450	17771450	A	G	SNP	SCML1	ENST00000380041	human	ensembl	74_37	+1	known	missense	c.928	p.T310A	0.001	pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SCML1	HGNC	ENSG00000047634				66	0	0	59	7	10.6061
PHKA2	0	genome.wustl.edu	37	X	18924619	18924619	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	18924619	18924619	A	G	SNP	PHKA2	ENST00000379942	human	ensembl	74_37	-1	known	missense	c.2800	p.C934R	1.000	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446				64	0	0	49	6	10.9091
PLCXD1	0	genome.wustl.edu	37	X	205517	205517	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	205517	205517	T	C	SNP	PLCXD1	ENST00000381657	human	ensembl	74_37	+1	known	missense	c.245	p.L82P	0.492	superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD1	HGNC	ENSG00000182378				78	0	0	57	5	8.06452
PTCHD1	0	genome.wustl.edu	37	X	23398122	23398122	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	23398122	23398122	T	G	SNP	PTCHD1	ENST00000379361	human	ensembl	74_37	+1	known	missense	c.766	p.S256A	0.795	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD1	HGNC	ENSG00000165186				137	0	0	87	59	40.411
MAGEB2	0	genome.wustl.edu	37	X	30237447	30237447	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	30237447	30237447	A	T	SNP	MAGEB2	ENST00000378988	human	ensembl	74_37	+1	known	missense	c.750	p.K250N	0.694	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB2	HGNC	ENSG00000099399				32	0	0	10	20	66.6667
GK	0	genome.wustl.edu	37	X	30737592	30737592	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	30737592	30737592	T	G	SNP	GK	ENST00000378943	human	ensembl	74_37	+1	known	missense	c.1093	p.S365A	1.000	pfam_Carb_kinase_FGGY_C,tigrfam_Glycerol_kin	pfam_Carb_kinase_FGGY_N,pfam_Carb_kinase_FGGY_C,tigrfam_Glycerol_kin	-	no_errors	GK	HGNC	ENSG00000198814				36	0	0	25	10	28.5714
SYTL5	0	genome.wustl.edu	37	X	37984761	37984761	+	Splice_Site	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	37984761	37984761	T	G	SNP	SYTL5	ENST00000456733	human	ensembl	74_37	+1	known	splice_site	c.2116+2	e16+2	1.000	-	-	-	no_errors	SYTL5	HGNC	ENSG00000147041				32	0	0	12	29	70.7317
RPGR	0	genome.wustl.edu	37	X	38169936	38169936	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	38169936	38169936	A	G	SNP	RPGR	ENST00000378505	human	ensembl	74_37	-1	known	missense	c.710	p.L237P	0.817	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313				45	0	0	23	15	39.4737
EFHC2	0	genome.wustl.edu	37	X	44109672	44109672	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	44109672	44109672	G	T	SNP	EFHC2	ENST00000420999	human	ensembl	74_37	-1	known	missense	c.626	p.P209H	0.996	NULL	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_hand_dom	-	no_errors	EFHC2	HGNC	ENSG00000183690				22	0	0	9	11	55
RGN	0	genome.wustl.edu	37	X	46951102	46951102	+	Silent	SNP	A	A	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	46951102	46951102	A	G	SNP	RGN	ENST00000336169	human	ensembl	74_37	+1	known	silent	c.588	p.L196	1.000	pfam_SGL,prints_Regucalcin	pfam_SGL,prints_SMP-30,prints_Regucalcin	-	no_errors	RGN	HGNC	ENSG00000130988				49	0	0	18	25	58.1395
CCNB3	0	genome.wustl.edu	37	X	50051989	50051989	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	50051989	50051989	A	T	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	missense	c.820	p.T274S	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082				42	0	0	62	7	10.1449
SHOX	0	genome.wustl.edu	37	X	595445	595445	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	595445	595445	T	G	SNP	SHOX	ENST00000381578	human	ensembl	74_37	+1	known	missense	c.370	p.F124V	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	SHOX	HGNC	ENSG00000185960				35	0	0	13	10	43.4783
MAGEE1	0	genome.wustl.edu	37	X	75648336	75648336	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	75648336	75648336	A	C	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	missense	c.13	p.S5R	1.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934				15	0	0	15	5	25
MAGEE1	0	genome.wustl.edu	37	X	75649840	75649840	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	75649840	75649840	A	C	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	missense	c.1517	p.D506A	0.794	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934				39	0	0	31	2	6.06061
ZNF711	0	genome.wustl.edu	37	X	84510394	84510394	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	X	84510394	84510394	T	G	SNP	ZNF711	ENST00000395402	human	ensembl	74_37	+1	known	missense	c.143	p.V48G	1.000	pfam_Transcrp_activ_Zfx/Zfy-dom	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF711	HGNC	ENSG00000147180				111	0	0	55	71	56.3492
LHX9	0	genome.wustl.edu	37	1	197896912	197896913	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	197896912	197896913	AG	-	DEL	LHX9	ENST00000367387	human	ensembl	74_37	+1	known	frame_shift_del	c.925_926	p.R309fs	1.000:1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX9	HGNC	ENSG00000143355				84	0	0	85	7	7.6087
USH2A	0	genome.wustl.edu	37	1	215972273	215972275	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	215972273	215972275	CTT	-	DEL	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	in_frame_del	c.9934_9932	p.E3311in_frame_del	0.106:0.036:0.964	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				121	0	0	86	20	18.8679
DOCK7	0	genome.wustl.edu	37	1	62941104	62941104	+	RNA	DEL	A	A	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	62941104	62941104	A	-	DEL	DOCK7	ENST00000467758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	DOCK7	HGNC	ENSG00000116641				32	0	0	27	3	10
ITGB3BP	0	genome.wustl.edu	37	1	63912545	63912546	+	RNA	INS	-	-	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	1	63912545	63912546	-	T	INS	ITGB3BP	ENST00000492655	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ITGB3BP	HGNC	ENSG00000142856				46	0	0	48	4	7.69231
LIPF	0	genome.wustl.edu	37	10	90427073	90427074	+	Frame_Shift_Ins	INS	-	-	TGGCAAGTTT			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	10	90427073	90427074	-	TGGCAAGTTT	INS	LIPF	ENST00000394375	human	ensembl	74_37	+1	known	frame_shift_ins	c.49_50	p.L20fs	0.000:0.000	NULL	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPF	HGNC	ENSG00000182333				92	0	0	63	7	10
OR10A6	0	genome.wustl.edu	37	11	7950098	7950098	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	11	7950098	7950098	T	-	DEL	OR10A6	ENST00000309838	human	ensembl	74_37	-1	known	frame_shift_del	c.112	p.T38fs	0.047	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A6	HGNC	ENSG00000175393				122	0	0	92	27	22.6891
SMAD9	0	genome.wustl.edu	37	13	37447008	37447008	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	13	37447008	37447008	G	-	DEL	SMAD9	ENST00000379826	human	ensembl	74_37	-1	known	frame_shift_del	c.457	p.Q153fs	1.000	NULL	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD9	HGNC	ENSG00000120693				56	0	0	44	9	16.9811
MYLK3	0	genome.wustl.edu	37	16	46755107	46755107	+	Splice_Site	DEL	T	T	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	16	46755107	46755107	T	-	DEL	MYLK3	ENST00000394809	human	ensembl	74_37	-1	known	splice_site_del	c.1915-2	e9-2	1.000	-	-	-	no_errors	MYLK3	HGNC	ENSG00000140795				93	0	0	90	8	8.16327
RPL12P38	0	genome.wustl.edu	37	17	58512419	58512419	+	RNA	DEL	A	A	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	17	58512419	58512419	A	-	DEL	RPL12P38	ENST00000588627	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RPL12P38	HGNC	ENSG00000213228				12	0	0	8	4	33.3333
SERPINB10	0	genome.wustl.edu	37	18	61584739	61584739	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	18	61584739	61584739	A	-	DEL	SERPINB10	ENST00000238508	human	ensembl	74_37	+1	known	frame_shift_del	c.218	p.R76fs	0.998	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB10	HGNC	ENSG00000242550				20	0	0	13	6	31.5789
TTN	0	genome.wustl.edu	37	2	179452912	179452912	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	179452912	179452912	A	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.55518	p.D18507fs	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				53	0	0	50	5	9.09091
NEUROD1	0	genome.wustl.edu	37	2	182542971	182542972	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	2	182542971	182542972	-	G	INS	NEUROD1	ENST00000295108	human	ensembl	74_37	-1	known	frame_shift_ins	c.617_616	p.H206fs	0.999:0.996	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD1	HGNC	ENSG00000162992				126	0	0	74	18	19.5652
DMXL1	0	genome.wustl.edu	37	5	118502338	118502339	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	118502338	118502339	-	T	INS	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	frame_shift_ins	c.4998_4999	p.G1668fs	1.000:1.000	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869				83	0	0	59	26	30.5882
KIAA0947	0	genome.wustl.edu	37	5	5460799	5460799	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	5	5460799	5460799	A	-	DEL	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	frame_shift_del	c.1352	p.E451fs	0.031	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				58	0	0	42	13	23.6364
PHF10	0	genome.wustl.edu	37	6	170105268	170105268	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BR-8589-01A-11D-2394-08	TCGA-BR-8589-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9bac4806-1772-4b40-b2d1-b55ed1674019	d5ee4fdc-25db-4fe2-b078-0406e217ee5a	6	170105268	170105268	A	-	DEL	PHF10	ENST00000339209	human	ensembl	74_37	-1	known	frame_shift_del	c.1372	p.Y458fs	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF10	HGNC	ENSG00000130024				85	0	0	70	16	18.6047
