Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AMPD1	0	genome.wustl.edu	37	1	115218607	115218607	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	115218607	115218607	T	G	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.1505	p.K502T	1.000	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748				136	0	0	92	10	9.80392
ETV3L	0	genome.wustl.edu	37	1	157069034	157069034	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	157069034	157069034	G	A	SNP	ETV3L	ENST00000454449	human	ensembl	74_37	-1	known	silent	c.195	p.Y65	0.983	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV3L	HGNC	ENSG00000253831				62	0	0	65	6	8.4507
CRP	0	genome.wustl.edu	37	1	159683371	159683371	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	159683371	159683371	C	T	SNP	CRP	ENST00000255030	human	ensembl	74_37	-1	known	missense	c.619	p.A207T	0.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	CRP	HGNC	ENSG00000132693				127	0	0	112	13	10.4
CRP	0	genome.wustl.edu	37	1	159683427	159683427	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	159683427	159683427	T	C	SNP	CRP	ENST00000255030	human	ensembl	74_37	-1	known	missense	c.563	p.E188G	0.819	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	CRP	HGNC	ENSG00000132693				218	0	0	182	15	7.61421
VANGL2	0	genome.wustl.edu	37	1	160385857	160385857	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	160385857	160385857	G	A	SNP	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	missense	c.77	p.R26H	1.000	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738				61	0	0	46	5	9.80392
CELA3A	0	genome.wustl.edu	37	1	22336254	22336254	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	22336254	22336254	C	T	SNP	CELA3A	ENST00000290122	human	ensembl	74_37	+1	known	silent	c.699	p.H233	0.710	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA3A	HGNC	ENSG00000142789				72	0	0	57	4	6.55738
CELA3A	0	genome.wustl.edu	37	1	22336257	22336257	+	Silent	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	22336257	22336257	T	C	SNP	CELA3A	ENST00000290122	human	ensembl	74_37	+1	known	silent	c.702	p.G234	0.259	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA3A	HGNC	ENSG00000142789				73	0	0	57	5	8.06452
GREM2	0	genome.wustl.edu	37	1	240656388	240656388	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	240656388	240656388	A	C	SNP	GREM2	ENST00000318160	human	ensembl	74_37	-1	known	missense	c.388	p.S130A	0.994	pfam_DAN,pfam_Cys_knot,smart_Cys_knot_C,pirsf_Gremlin_precursor,pfscan_Cys_knot_C	pfam_DAN,pfam_Cys_knot,smart_Cys_knot_C,pirsf_Gremlin_precursor,pfscan_Cys_knot_C	-	no_errors	GREM2	HGNC	ENSG00000180875				96	0	0	107	6	5.30973
OR2M2	0	genome.wustl.edu	37	1	248344005	248344005	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	248344005	248344005	A	T	SNP	OR2M2	ENST00000359682	human	ensembl	74_37	+1	known	missense	c.718	p.T240S	0.914	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M2	HGNC	ENSG00000198601				329	1	0.30303	258	22	7.85714
OR2M4	0	genome.wustl.edu	37	1	248402877	248402877	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	248402877	248402877	T	G	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	missense	c.647	p.L216R	0.003	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180				84	0	0	78	8	9.30233
CCDC27	0	genome.wustl.edu	37	1	3679856	3679856	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	3679856	3679856	G	T	SNP	CCDC27	ENST00000294600	human	ensembl	74_37	+1	known	missense	c.1139	p.R380M	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592				26	0	0	14	4	22.2222
CDC20	0	genome.wustl.edu	37	1	43826741	43826741	+	RNA	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	43826741	43826741	G	T	SNP	CDC20	ENST00000482046	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CDC20	HGNC	ENSG00000117399				75	0	0	52	8	13.3333
ANKRD13C	0	genome.wustl.edu	37	1	70790597	70790597	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	70790597	70790597	C	T	SNP	ANKRD13C	ENST00000370944	human	ensembl	74_37	-1	known	silent	c.516	p.V172	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD13C	HGNC	ENSG00000118454				90	0	0	62	4	6.06061
TTC40	0	genome.wustl.edu	37	10	134622112	134622112	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	134622112	134622112	G	A	SNP	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	missense	c.2444	p.A815V	0.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811				34	0	0	21	4	16
CACNB2	0	genome.wustl.edu	37	10	18828261	18828261	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	18828261	18828261	C	T	SNP	CACNB2	ENST00000324631	human	ensembl	74_37	+1	known	missense	c.1591	p.R531C	0.997	NULL	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu,prints_VDCC_L_b2su	-	no_errors	CACNB2	HGNC	ENSG00000165995				83	0	0	78	11	12.3596
MYO3A	0	genome.wustl.edu	37	10	26243904	26243904	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	26243904	26243904	A	C	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.270	p.K90N	0.008	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				188	0	0	133	20	13.0719
EPC1	0	genome.wustl.edu	37	10	32575665	32575665	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	32575665	32575665	T	C	SNP	EPC1	ENST00000263062	human	ensembl	74_37	-1	known	missense	c.1348	p.R450G	0.991	NULL	pfam_Enhancer_polycomb_C,pfam_Enhancer_polycomb-like_N	-	no_errors	EPC1	HGNC	ENSG00000120616				51	0	0	41	3	6.81818
PCDH15	0	genome.wustl.edu	37	10	55583120	55583120	+	Splice_Site	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	55583120	55583120	T	G	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	splice_site	c.4368-2	e32-2	1.000	-	-	-	no_errors	PCDH15	HGNC	ENSG00000150275				85	0	0	40	6	13.0435
PCDH15	0	genome.wustl.edu	37	10	55996686	55996686	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	55996686	55996686	T	G	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.882	p.E294D	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				136	0	0	102	8	7.27273
FAM208B	0	genome.wustl.edu	37	10	5769036	5769036	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	5769036	5769036	A	G	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.437	p.K146R	0.002	pfam_DUF3699	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				134	0	0	118	7	5.6
KIAA1279	0	genome.wustl.edu	37	10	70765585	70765585	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	70765585	70765585	C	A	SNP	KIAA1279	ENST00000361983	human	ensembl	74_37	+1	known	missense	c.703	p.L235I	1.000	NULL	pfam_KBP	-	no_errors	KIAA1279	HGNC	ENSG00000198954				62	0	0	37	9	19.5652
IFIT1B	0	genome.wustl.edu	37	10	91143418	91143418	+	Silent	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	91143418	91143418	T	G	SNP	IFIT1B	ENST00000371809	human	ensembl	74_37	+1	known	silent	c.348	p.T116	0.069	smart_TPR_repeat	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT1B	HGNC	ENSG00000204010				96	0	0	75	7	8.53659
YAP1	0	genome.wustl.edu	37	11	101985013	101985013	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	101985013	101985013	A	G	SNP	YAP1	ENST00000282441	human	ensembl	74_37	+1	known	missense	c.460	p.T154A	0.448	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	YAP1	HGNC	ENSG00000137693				124	0	0	89	13	12.7451
ATF4P4	0	genome.wustl.edu	37	11	113661433	113661433	+	RNA	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	113661433	113661433	A	C	SNP	ATF4P4	ENST00000393544	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.115	-	-	-	no_errors	ATF4P4	HGNC	ENSG00000256167				194	0	0	154	25	13.9665
KMT2A	0	genome.wustl.edu	37	11	118375060	118375060	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	118375060	118375060	C	T	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.8444	p.P2815L	0.997	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058				186	0	0	138	49	26.2032
OR52K1	0	genome.wustl.edu	37	11	4510347	4510347	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	4510347	4510347	T	A	SNP	OR52K1	ENST00000307632	human	ensembl	74_37	+1	known	missense	c.217	p.L73M	0.036	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52K1	HGNC	ENSG00000196778				98	0	0	76	10	11.6279
OR51A7	0	genome.wustl.edu	37	11	4928970	4928970	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	4928970	4928970	T	G	SNP	OR51A7	ENST00000359350	human	ensembl	74_37	+1	known	missense	c.371	p.L124R	0.990	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR51A7	HGNC	ENSG00000176895				156	0	0	107	11	9.32203
OR4C11	0	genome.wustl.edu	37	11	55371158	55371158	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	55371158	55371158	T	G	SNP	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	missense	c.692	p.K231T	0.005	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188				65	0	0	44	6	12
OR4C11	0	genome.wustl.edu	37	11	55371231	55371231	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	55371231	55371231	T	G	SNP	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	missense	c.619	p.S207R	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188				60	0	0	37	9	19.5652
OR5M10	0	genome.wustl.edu	37	11	56344522	56344522	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	56344522	56344522	A	C	SNP	OR5M10	ENST00000526812	human	ensembl	74_37	-1	known	missense	c.676	p.F226V	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M10	HGNC	ENSG00000254834				98	0	0	103	7	6.36364
LRP5	0	genome.wustl.edu	37	11	68115710	68115710	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	68115710	68115710	G	A	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.487	p.G163R	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337				105	0	0	82	16	16.3265
OR5P3	0	genome.wustl.edu	37	11	7847027	7847027	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	7847027	7847027	T	C	SNP	OR5P3	ENST00000328375	human	ensembl	74_37	-1	known	missense	c.493	p.R165G	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5P3	HGNC	ENSG00000182334				102	0	0	67	12	15.1899
TRIM49C	0	genome.wustl.edu	37	11	89774338	89774338	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	11	89774338	89774338	A	C	SNP	TRIM49C	ENST00000448984	human	ensembl	74_37	+1	known	missense	c.979	p.S327R	0.001	superfamily_ConA-like_lec_gl_sf,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM49C	HGNC	ENSG00000204449				58	0	0	43	4	8.51064
STYK1	0	genome.wustl.edu	37	12	10775239	10775239	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	10775239	10775239	A	G	SNP	STYK1	ENST00000075503	human	ensembl	74_37	-1	known	missense	c.965	p.L322P	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	STYK1	HGNC	ENSG00000060140				74	0	0	53	8	13.1148
OAS2	0	genome.wustl.edu	37	12	113442842	113442842	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	113442842	113442842	G	A	SNP	OAS2	ENST00000342315	human	ensembl	74_37	+1	known	missense	c.1283	p.R428Q	0.000	pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS2	HGNC	ENSG00000111335				60	0	0	44	9	16.9811
DDX54	0	genome.wustl.edu	37	12	113603716	113603716	+	Silent	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	113603716	113603716	A	G	SNP	DDX54	ENST00000314045	human	ensembl	74_37	-1	known	silent	c.1536	p.A512	0.203	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DBP10CT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX54	HGNC	ENSG00000123064				62	0	0	72	10	12.1951
PRB2	0	genome.wustl.edu	37	12	11546376	11546376	+	Silent	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	11546376	11546376	A	C	SNP	PRB2	ENST00000389362	human	ensembl	74_37	-1	known	silent	c.636	p.P212	0.021	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335				270	1	0.369004	232	40	14.7059
ABCC9	0	genome.wustl.edu	37	12	22025613	22025613	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	22025613	22025613	A	G	SNP	ABCC9	ENST00000261200	human	ensembl	74_37	-1	known	missense	c.2144	p.L715P	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2	-	no_errors	ABCC9	HGNC	ENSG00000069431				201	0	0	170	29	14.5729
LRRK2	0	genome.wustl.edu	37	12	40699659	40699659	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	40699659	40699659	T	G	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.3850	p.F1284V	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906				69	0	0	46	8	14.8148
KMT2D	0	genome.wustl.edu	37	12	49445717	49445717	+	Silent	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	49445717	49445717	A	C	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	silent	c.1749	p.P583	0.905	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				115	0	0	91	8	8.08081
KRT6A	0	genome.wustl.edu	37	12	52886595	52886595	+	Silent	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	52886595	52886595	G	T	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	silent	c.378	p.G126	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420				66	0	0	32	7	17.9487
KRT73	0	genome.wustl.edu	37	12	53010025	53010025	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	53010025	53010025	G	A	SNP	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	missense	c.587	p.T196M	0.001	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				177	0	0	127	40	23.9521
KRT1	0	genome.wustl.edu	37	12	53072332	53072332	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	53072332	53072332	C	T	SNP	KRT1	ENST00000252244	human	ensembl	74_37	-1	known	missense	c.800	p.R267Q	0.851	pfam_IF,prints_Keratin_II	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT1	HGNC	ENSG00000167768				114	0	0	87	15	14.7059
LRP1	0	genome.wustl.edu	37	12	57560825	57560825	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	57560825	57560825	G	A	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	silent	c.2910	p.S970	0.058	pfam_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				122	0	0	60	16	21.0526
SLC26A10	0	genome.wustl.edu	37	12	58019453	58019453	+	Silent	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	58019453	58019453	T	G	SNP	SLC26A10	ENST00000320442	human	ensembl	74_37	+1	known	silent	c.1617	p.A539	0.988	pfscan_STAS_dom	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A10	HGNC	ENSG00000135502				89	0	0	61	13	17.5676
MARCH9	0	genome.wustl.edu	37	12	58152549	58152549	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	58152549	58152549	C	T	SNP	MARCH9	ENST00000266643	human	ensembl	74_37	+1	known	missense	c.910	p.R304C	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH9	HGNC	ENSG00000139266				35	0	0	29	5	14.7059
KCNC2	0	genome.wustl.edu	37	12	75434899	75434899	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	75434899	75434899	A	C	SNP	KCNC2	ENST00000341669	human	ensembl	74_37	-1	known	missense	c.1868	p.L623R	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC2	HGNC	ENSG00000166006				57	0	0	42	3	6.66667
MBNL2	0	genome.wustl.edu	37	13	97999166	97999166	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	13	97999166	97999166	G	A	SNP	MBNL2	ENST00000376673	human	ensembl	74_37	+1	known	missense	c.649	p.V217I	1.000	smart_Znf_CCCH	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	MBNL2	HGNC	ENSG00000139793				94	0	0	59	9	13.2353
MYH6	0	genome.wustl.edu	37	14	23866231	23866231	+	Silent	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	14	23866231	23866231	G	T	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	silent	c.2109	p.G703	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				72	0	0	70	5	6.66667
DHRS4-AS1	0	genome.wustl.edu	37	14	24422915	24422915	+	RNA	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	14	24422915	24422915	T	G	SNP	DHRS4-AS1	ENST00000553454	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	DHRS4-AS1	HGNC	ENSG00000215256				24	0	0	30	3	9.09091
FLRT2	0	genome.wustl.edu	37	14	86087927	86087927	+	Silent	SNP	C	C	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	14	86087927	86087927	C	A	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	silent	c.69	p.S23	1.000	NULL	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				109	0	0	97	15	13.3929
KCNK13	0	genome.wustl.edu	37	14	90651134	90651134	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	14	90651134	90651134	C	T	SNP	KCNK13	ENST00000282146	human	ensembl	74_37	+1	known	silent	c.1014	p.D338	0.008	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_THIK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK13	HGNC	ENSG00000152315				130	0	0	103	15	12.7119
UBE3A	0	genome.wustl.edu	37	15	25616755	25616755	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	15	25616755	25616755	T	G	SNP	UBE3A	ENST00000397954	human	ensembl	74_37	-1	known	missense	c.575	p.E192A	1.000	pirsf_Ubiquitin-protein_ligase_E6-AP	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	-	no_errors	UBE3A	HGNC	ENSG00000114062				221	0	0	159	14	8.09249
SPTBN5	0	genome.wustl.edu	37	15	42178399	42178399	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	15	42178399	42178399	G	A	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.1054	p.R352C	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				50	0	0	28	6	17.6471
SNX29	0	genome.wustl.edu	37	16	12096857	12096857	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	16	12096857	12096857	C	T	SNP	SNX29	ENST00000569801	human	ensembl	74_37	+1	known	missense	c.79	p.R27C	1.000	NULL	pfscan_Run	-	no_errors	SNX29	HGNC	ENSG00000048471				95	0	0	58	7	10.7692
MEFV	0	genome.wustl.edu	37	16	3304411	3304411	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	16	3304411	3304411	G	A	SNP	MEFV	ENST00000219596	human	ensembl	74_37	-1	known	silent	c.657	p.G219	0.000	NULL	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_DEATH-like_dom,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC	ENSG00000103313				49	0	0	41	4	8.88889
CMIP	0	genome.wustl.edu	37	16	81739133	81739133	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	16	81739133	81739133	G	A	SNP	CMIP	ENST00000537098	human	ensembl	74_37	+1	known	silent	c.2121	p.S707	0.971	NULL	NULL	-	no_errors	CMIP	HGNC	ENSG00000153815				21	0	0	12	4	25
DNAH9	0	genome.wustl.edu	37	17	11795238	11795238	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	11795238	11795238	A	C	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.11257	p.T3753P	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				170	0	0	145	15	9.375
MPRIP	0	genome.wustl.edu	37	17	17077343	17077343	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	17077343	17077343	T	G	SNP	MPRIP	ENST00000395811	human	ensembl	74_37	+1	known	missense	c.2543	p.L848R	1.000	NULL	pfam_Pleckstrin_homology,superfamily_Ferritin-like_SF,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	MPRIP	HGNC	ENSG00000133030				59	0	0	41	5	10.8696
NLK	0	genome.wustl.edu	37	17	26518100	26518100	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	26518100	26518100	G	A	SNP	NLK	ENST00000407008	human	ensembl	74_37	+1	known	silent	c.1290	p.G430	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NLK	HGNC	ENSG00000087095				87	0	0	82	12	12.766
FOXN1	0	genome.wustl.edu	37	17	26851592	26851592	+	Silent	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	26851592	26851592	A	C	SNP	FOXN1	ENST00000226247	human	ensembl	74_37	+1	known	silent	c.195	p.P65	0.375	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN1	HGNC	ENSG00000109101				141	0	0	117	13	10
MED24	0	genome.wustl.edu	37	17	38189673	38189673	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	38189673	38189673	A	C	SNP	MED24	ENST00000394128	human	ensembl	74_37	-1	known	missense	c.596	p.L199R	1.000	pfam_Mediator_Med24_N	pfam_Mediator_Med24_N	-	no_errors	MED24	HGNC	ENSG00000008838				16	0	0	12	2	14.2857
MSI2	0	genome.wustl.edu	37	17	55334407	55334407	+	RNA	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	55334407	55334407	A	T	SNP	MSI2	ENST00000579531	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MSI2	HGNC	ENSG00000153944				37	0	0	36	3	7.69231
VEZF1	0	genome.wustl.edu	37	17	56059278	56059278	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	56059278	56059278	G	A	SNP	VEZF1	ENST00000581208	human	ensembl	74_37	-1	known	missense	c.748	p.H250Y	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	VEZF1	HGNC	ENSG00000136451				91	0	0	68	6	8.10811
RPS6KB1	0	genome.wustl.edu	37	17	58024086	58024086	+	Silent	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	58024086	58024086	A	T	SNP	RPS6KB1	ENST00000225577	human	ensembl	74_37	+1	known	silent	c.1515	p.P505	0.924	pirsf_Ribosomal_S6_kinase	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase,pfscan_Prot_kinase_dom	-	no_errors	RPS6KB1	HGNC	ENSG00000108443				134	0	0	102	7	6.42202
PRKAR1A	0	genome.wustl.edu	37	17	66524021	66524021	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	66524021	66524021	T	G	SNP	PRKAR1A	ENST00000358598	human	ensembl	74_37	+1	known	missense	c.749	p.L250R	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR1A	HGNC	ENSG00000108946				92	0	0	59	8	11.9403
GLOD4	0	genome.wustl.edu	37	17	680125	680125	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	680125	680125	G	A	SNP	GLOD4	ENST00000301328	human	ensembl	74_37	-1	known	missense	c.289	p.L97F	1.000	NULL	NULL	-	no_errors	GLOD4	HGNC	ENSG00000167699				121	0	0	111	10	8.26446
TP53	0	genome.wustl.edu	37	17	7577084	7577084	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	7577084	7577084	T	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.854	p.E285V	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				66	0	0	39	14	26.4151
DNAH2	0	genome.wustl.edu	37	17	7724572	7724572	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	17	7724572	7724572	G	A	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	missense	c.11027	p.R3676H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914				155	0	0	113	8	6.61157
DCC	0	genome.wustl.edu	37	18	50278619	50278619	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	18	50278619	50278619	C	G	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.287	p.S96C	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				111	1	0.892857	77	7	8.33333
CYB5A	0	genome.wustl.edu	37	18	71920857	71920857	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	18	71920857	71920857	C	G	SNP	CYB5A	ENST00000340533	human	ensembl	74_37	-1	known	missense	c.367	p.V123L	0.881	NULL	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5A	HGNC	ENSG00000166347				32	0	0	33	3	8.33333
SALL3	0	genome.wustl.edu	37	18	76754852	76754852	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	18	76754852	76754852	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.2861	p.A954V	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				29	0	0	18	3	14.2857
ABHD17A	0	genome.wustl.edu	37	19	1877558	1877558	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	1877558	1877558	C	G	SNP	ABHD17A	ENST00000250974	human	ensembl	74_37	-1	known	missense	c.809	p.R270P	1.000	pfam_Dienelactn_hydro	pfam_Dienelactn_hydro	-	no_errors	ABHD17A	HGNC	ENSG00000129968				33	0	0	19	3	13.6364
HAPLN4	0	genome.wustl.edu	37	19	19371983	19371983	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	19371983	19371983	C	T	SNP	HAPLN4	ENST00000291481	human	ensembl	74_37	-1	known	silent	c.123	p.E41	1.000	NULL	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN4	HGNC	ENSG00000187664				36	0	0	27	3	10
ZNF208	0	genome.wustl.edu	37	19	22156850	22156850	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	22156850	22156850	A	G	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.986	p.I329T	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321				23	0	0	31	9	22.5
ZNF729	0	genome.wustl.edu	37	19	22497235	22497235	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	22497235	22497235	A	C	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	missense	c.1016	p.K339T	0.011	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350				38	0	0	29	4	12.1212
ZNF99	0	genome.wustl.edu	37	19	22939535	22939535	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	22939535	22939535	T	G	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	missense	c.2636	p.K879T	0.281	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973				64	0	0	38	8	17.3913
LOC100506469	0	genome.wustl.edu	37	19	36034531	36034531	+	RNA	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	36034531	36034531	A	C	SNP	LOC100506469	ENST00000588286	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	AD000090.2	Clone_based_vega_gene	ENSG00000236144				132	0	0	83	10	10.7527
ZNF829	0	genome.wustl.edu	37	19	37383033	37383033	+	Silent	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	37383033	37383033	A	G	SNP	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	silent	c.903	p.A301	0.936	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869				88	0	0	53	7	11.6667
ZNF585A	0	genome.wustl.edu	37	19	37644040	37644040	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	37644040	37644040	T	C	SNP	ZNF585A	ENST00000356958	human	ensembl	74_37	-1	known	missense	c.761	p.K254R	0.003	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585A	HGNC	ENSG00000196967				192	0	0	122	14	10.2941
SIGLEC12	0	genome.wustl.edu	37	19	52002437	52002437	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	52002437	52002437	T	A	SNP	SIGLEC12	ENST00000291707	human	ensembl	74_37	-1	known	missense	c.1122	p.Q374H	0.005	pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC12	HGNC	ENSG00000254521				87	0	0	73	10	12.0482
ZNF578	0	genome.wustl.edu	37	19	53014994	53014994	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	53014994	53014994	T	C	SNP	ZNF578	ENST00000421239	human	ensembl	74_37	+1	known	missense	c.1360	p.S454P	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405				91	0	0	40	11	21.5686
ACTL9	0	genome.wustl.edu	37	19	8809050	8809050	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	8809050	8809050	A	G	SNP	ACTL9	ENST00000324436	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.918	NULL	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL9	HGNC	ENSG00000181786				121	0	0	58	16	21.6216
MUC16	0	genome.wustl.edu	37	19	9017470	9017470	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	9017470	9017470	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.37854	p.H12618	0.000	pfam_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				143	0	0	89	11	11
KCNF1	0	genome.wustl.edu	37	2	11053508	11053508	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	11053508	11053508	G	A	SNP	KCNF1	ENST00000295082	human	ensembl	74_37	+1	known	missense	c.956	p.R319H	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNF1	HGNC	ENSG00000162975				58	0	0	54	5	8.47458
LRP1B	0	genome.wustl.edu	37	2	141946115	141946115	+	Silent	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	141946115	141946115	A	G	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.888	p.N296	1.000	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				66	0	0	50	4	7.40741
DYNC1I2	0	genome.wustl.edu	37	2	172585298	172585298	+	Silent	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	172585298	172585298	T	C	SNP	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	silent	c.1329	p.D443	0.997	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380				16	0	0	21	2	8.69565
OSBPL6	0	genome.wustl.edu	37	2	179260240	179260240	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	179260240	179260240	G	A	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.2771	p.R924Q	1.000	NULL	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156				74	0	0	70	10	12.5
TTN	0	genome.wustl.edu	37	2	179423358	179423358	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	179423358	179423358	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.79124	p.P26375Q	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				33	0	0	24	3	11.1111
TTN	0	genome.wustl.edu	37	2	179423359	179423359	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	179423359	179423359	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.79123	p.P26375T	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				33	0	0	24	3	11.1111
ERBB4	0	genome.wustl.edu	37	2	212251754	212251754	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	212251754	212251754	A	C	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.3305	p.F1102C	0.992	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568				121	0	0	106	10	8.62069
VRK2	0	genome.wustl.edu	37	2	58386561	58386561	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	58386561	58386561	C	T	SNP	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	silent	c.1260	p.I420	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116				79	0	0	70	4	5.40541
RAB11FIP5	0	genome.wustl.edu	37	2	73316544	73316544	+	RNA	SNP	C	C	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	2	73316544	73316544	C	A	SNP	RAB11FIP5	ENST00000493523	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAB11FIP5	HGNC	ENSG00000135631				60	0	0	32	5	13.5135
PDYN	0	genome.wustl.edu	37	20	1961114	1961114	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	20	1961114	1961114	T	A	SNP	PDYN	ENST00000217305	human	ensembl	74_37	-1	known	missense	c.620	p.Y207F	0.998	NULL	pfam_Opioid_neupept,prints_Proenkphlin_B,prints_Opioid_neupept	-	no_errors	PDYN	HGNC	ENSG00000101327				180	0	0	164	9	5.20231
CSTL1	0	genome.wustl.edu	37	20	23421043	23421043	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	20	23421043	23421043	T	G	SNP	CSTL1	ENST00000246020	human	ensembl	74_37	+1	known	missense	c.139	p.F47V	0.927	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CSTL1	HGNC	ENSG00000125823				151	0	0	149	11	6.875
CST5	0	genome.wustl.edu	37	20	23860165	23860165	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	20	23860165	23860165	A	T	SNP	CST5	ENST00000304710	human	ensembl	74_37	-1	known	missense	c.149	p.F50Y	0.007	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST5	HGNC	ENSG00000170367				251	0	0	225	15	6.25
CPNE1	0	genome.wustl.edu	37	20	34220233	34220233	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	20	34220233	34220233	C	T	SNP	CPNE1	ENST00000317677	human	ensembl	74_37	-1	known	silent	c.399	p.T133	0.998	superfamily_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE1	HGNC	ENSG00000214078				40	0	0	36	4	10
RBM39	0	genome.wustl.edu	37	20	34293266	34293266	+	RNA	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	20	34293266	34293266	T	C	SNP	RBM39	ENST00000490354	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.006	-	-	-	no_errors	RBM39	HGNC	ENSG00000131051				38	0	0	28	6	17.6471
COMT	0	genome.wustl.edu	37	22	19951271	19951271	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	22	19951271	19951271	G	A	SNP	COMT	ENST00000361682	human	ensembl	74_37	+1	known	missense	c.472	p.V158M	0.925	pfam_O-MeTrfase_3,pirsf_Catechol_O-MeTrfase_euk	pfam_O-MeTrfase_3,pirsf_Catechol_O-MeTrfase_euk	-	no_errors	COMT	HGNC	ENSG00000093010				26	0	0	33	3	8.33333
PES1	0	genome.wustl.edu	37	22	30984024	30984024	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	22	30984024	30984024	T	G	SNP	PES1	ENST00000354694	human	ensembl	74_37	-1	known	missense	c.242	p.K81T	1.000	pfam_Pescadillo	pfam_Pescadillo,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PES1	HGNC	ENSG00000100029				106	0	0	69	5	6.75676
SBF1	0	genome.wustl.edu	37	22	50895067	50895067	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	22	50895067	50895067	T	C	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	missense	c.3940	p.S1314G	0.668	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				8	0	0	1	9	90
SLCO2A1	0	genome.wustl.edu	37	3	133661595	133661595	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	133661595	133661595	G	A	SNP	SLCO2A1	ENST00000310926	human	ensembl	74_37	-1	known	silent	c.1479	p.S493	1.000	pfam_OA_transporter,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO2A1	HGNC	ENSG00000174640				96	0	0	68	6	8.10811
CNTN6	0	genome.wustl.edu	37	3	1337371	1337371	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	1337371	1337371	T	G	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.541	p.L181V	0.961	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				68	0	0	51	6	10.5263
CPA3	0	genome.wustl.edu	37	3	148614411	148614411	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	148614411	148614411	G	T	SNP	CPA3	ENST00000296046	human	ensembl	74_37	+1	known	nonsense	c.1171	p.E391*	0.997	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA3	HGNC	ENSG00000163751				113	0	0	95	5	5
ATP13A5	0	genome.wustl.edu	37	3	193002808	193002808	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	193002808	193002808	T	C	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	missense	c.3121	p.S1041G	0.988	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527				75	0	0	58	7	10.7692
ZNF385D	0	genome.wustl.edu	37	3	21552487	21552487	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	21552487	21552487	G	A	SNP	ZNF385D	ENST00000281523	human	ensembl	74_37	-1	known	missense	c.305	p.T102M	1.000	smart_Znf_U1,smart_Znf_C2H2-like	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385D	HGNC	ENSG00000151789				66	0	0	63	6	8.69565
SCN10A	0	genome.wustl.edu	37	3	38768457	38768457	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	38768457	38768457	G	C	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.2727	p.N909K	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				164	0	0	151	12	7.36196
ANO10	0	genome.wustl.edu	37	3	43642035	43642035	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	43642035	43642035	C	T	SNP	ANO10	ENST00000292246	human	ensembl	74_37	-1	known	missense	c.178	p.E60K	0.998	NULL	pfam_Anoctamin	-	no_errors	ANO10	HGNC	ENSG00000160746				142	0	0	87	5	5.43478
SACM1L	0	genome.wustl.edu	37	3	45744976	45744976	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	45744976	45744976	G	A	SNP	SACM1L	ENST00000389061	human	ensembl	74_37	+1	known	missense	c.79	p.A27T	0.996	NULL	pfam_Syja_N,pfscan_Syja_N	-	no_errors	SACM1L	HGNC	ENSG00000211456				109	0	0	75	7	8.53659
STAB1	0	genome.wustl.edu	37	3	52556627	52556627	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	52556627	52556627	T	G	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.6667	p.F2223V	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				126	0	0	101	16	13.6752
HESX1	0	genome.wustl.edu	37	3	57232457	57232457	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	3	57232457	57232457	A	T	SNP	HESX1	ENST00000295934	human	ensembl	74_37	-1	known	missense	c.421	p.L141I	0.978	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HESX1	HGNC	ENSG00000163666				48	0	0	39	5	11.3636
NDST3	0	genome.wustl.edu	37	4	118975769	118975769	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	118975769	118975769	T	G	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.704	p.F235C	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				157	0	0	106	11	9.40171
FAT4	0	genome.wustl.edu	37	4	126411185	126411185	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	126411185	126411185	T	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.13208	p.I4403T	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				229	0	0	238	26	9.84848
DCHS2	0	genome.wustl.edu	37	4	155253742	155253742	+	Silent	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	155253742	155253742	G	A	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	silent	c.2121	p.P707	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				145	0	0	127	11	7.97101
TMA16	0	genome.wustl.edu	37	4	164440523	164440523	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	164440523	164440523	A	C	SNP	TMA16	ENST00000358572	human	ensembl	74_37	+1	known	missense	c.469	p.K157Q	1.000	pfam_Tma16	pfam_Tma16	-	no_errors	TMA16	HGNC	ENSG00000198498				39	0	0	18	4	18.1818
WDR19	0	genome.wustl.edu	37	4	39216265	39216265	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	39216265	39216265	T	C	SNP	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	missense	c.935	p.I312T	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796				55	0	0	23	3	11.5385
GRXCR1	0	genome.wustl.edu	37	4	42895515	42895515	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	42895515	42895515	G	A	SNP	GRXCR1	ENST00000399770	human	ensembl	74_37	+1	known	missense	c.232	p.D78N	1.000	NULL	pfam_Glutaredoxin,superfamily_Thioredoxin-like_fold,superfamily_HSP_DnaJ_Cys-rich_dom	-	no_errors	GRXCR1	HGNC	ENSG00000215203				208	0	0	143	20	12.2699
SH3TC1	0	genome.wustl.edu	37	4	8218729	8218729	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	4	8218729	8218729	C	T	SNP	SH3TC1	ENST00000245105	human	ensembl	74_37	+1	known	missense	c.674	p.T225M	0.000	NULL	superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC1	HGNC	ENSG00000125089				121	0	0	64	9	12.3288
TIFAB	0	genome.wustl.edu	37	5	134785284	134785284	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	134785284	134785284	C	T	SNP	TIFAB	ENST00000537858	human	ensembl	74_37	-1	known	missense	c.346	p.V116I	0.000	superfamily_SMAD_FHA_domain	pfam_FHA_dom,superfamily_SMAD_FHA_domain	-	no_errors	TIFAB	HGNC	ENSG00000255833				175	0	0	123	9	6.81818
PCDHA8	0	genome.wustl.edu	37	5	140221669	140221669	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	140221669	140221669	G	A	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	missense	c.763	p.A255T	0.102	pfam_Cadherin,superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962				118	0	0	72	6	7.69231
PCDHA10	0	genome.wustl.edu	37	5	140236731	140236731	+	Silent	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	140236731	140236731	C	T	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	silent	c.1098	p.T366	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				162	0	0	139	13	8.55263
PCDHB1	0	genome.wustl.edu	37	5	140431954	140431954	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	140431954	140431954	A	T	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	missense	c.899	p.E300V	0.569	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815				113	0	0	83	6	6.74157
PCDHGA12	0	genome.wustl.edu	37	5	140811824	140811824	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	140811824	140811824	A	G	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	missense	c.1498	p.S500G	0.050	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159				119	0	0	89	7	7.29167
HTR4	0	genome.wustl.edu	37	5	147889386	147889386	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	147889386	147889386	C	T	SNP	HTR4	ENST00000360693	human	ensembl	74_37	-1	known	missense	c.709	p.E237K	0.942	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT4_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HTR4	HGNC	ENSG00000164270				59	0	0	61	5	7.57576
TENM2	0	genome.wustl.edu	37	5	167489111	167489111	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	167489111	167489111	A	C	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.1356	p.E452D	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				57	0	0	36	6	14.2857
CDHR2	0	genome.wustl.edu	37	5	176005434	176005434	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	176005434	176005434	G	A	SNP	CDHR2	ENST00000261944	human	ensembl	74_37	+1	known	missense	c.1643	p.R548Q	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276				44	0	0	31	4	11.4286
AGXT2	0	genome.wustl.edu	37	5	35010216	35010216	+	Silent	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	35010216	35010216	T	C	SNP	AGXT2	ENST00000231420	human	ensembl	74_37	-1	known	silent	c.1227	p.E409	1.000	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT2	HGNC	ENSG00000113492				160	1	0.621118	104	7	6.30631
NIPBL	0	genome.wustl.edu	37	5	36955688	36955688	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	36955688	36955688	A	G	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.179	p.N60S	0.998	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				129	0	0	72	18	20
LIFR	0	genome.wustl.edu	37	5	38527391	38527391	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	38527391	38527391	C	T	SNP	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	missense	c.263	p.R88H	0.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594				63	0	0	32	7	17.9487
BDP1	0	genome.wustl.edu	37	5	70818194	70818194	+	Silent	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	70818194	70818194	A	C	SNP	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	silent	c.5070	p.G1690	0.953	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734				185	0	0	140	12	7.89474
FOXD1	0	genome.wustl.edu	37	5	72743802	72743802	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	72743802	72743802	G	C	SNP	FOXD1	ENST00000499003	human	ensembl	74_37	-1	known	missense	c.386	p.S129W	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD1	HGNC	ENSG00000251493				38	0	0	28	3	9.67742
ROS1	0	genome.wustl.edu	37	6	117631255	117631255	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	117631255	117631255	T	G	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	missense	c.6423	p.Q2141H	0.454	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				150	0	0	112	8	6.66667
TIAM2	0	genome.wustl.edu	37	6	155458563	155458563	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	155458563	155458563	G	A	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	missense	c.1447	p.A483T	0.233	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426				142	1	0.699301	140	13	8.49673
SLC17A3	0	genome.wustl.edu	37	6	25861882	25861882	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	25861882	25861882	G	A	SNP	SLC17A3	ENST00000397060	human	ensembl	74_37	-1	known	nonsense	c.595	p.R199*	0.998	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A3	HGNC	ENSG00000124564				120	0	0	77	6	7.22892
ABCF1	0	genome.wustl.edu	37	6	30551425	30551425	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	30551425	30551425	T	C	SNP	ABCF1	ENST00000326195	human	ensembl	74_37	+1	known	missense	c.956	p.F319S	1.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF1	HGNC	ENSG00000204574				172	0	0	127	26	16.9935
TAF8	0	genome.wustl.edu	37	6	42044976	42044976	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	42044976	42044976	A	T	SNP	TAF8	ENST00000456846	human	ensembl	74_37	+1	known	nonsense	c.919	p.K307*	1.000	NULL	pfam_BTP,pfam_TFIID_su8_C,superfamily_Histone-fold,smart_BTP	-	no_errors	TAF8	HGNC	ENSG00000137413				53	0	0	29	4	12.1212
HTR1B	0	genome.wustl.edu	37	6	78172330	78172330	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	78172330	78172330	G	A	SNP	HTR1B	ENST00000369947	human	ensembl	74_37	-1	known	missense	c.791	p.T264M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1B_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1B_rcpt,prints_5HT_rcpt,prints_ADR_fam	-	no_errors	HTR1B	HGNC	ENSG00000135312				167	0	0	124	11	8.14815
NDUFAF4	0	genome.wustl.edu	37	6	97344625	97344625	+	Silent	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	6	97344625	97344625	A	G	SNP	NDUFAF4	ENST00000316149	human	ensembl	74_37	-1	known	silent	c.235	p.L79	0.001	pfam_NDUFAF4	pfam_NDUFAF4	-	no_errors	NDUFAF4	HGNC	ENSG00000123545				147	0	0	80	12	13.0435
RELN	0	genome.wustl.edu	37	7	103338436	103338436	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	7	103338436	103338436	C	G	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.1007	p.G336A	0.995	NULL	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				210	0	0	143	11	7.14286
NRCAM	0	genome.wustl.edu	37	7	107790344	107790344	+	RNA	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	7	107790344	107790344	G	T	SNP	NRCAM	ENST00000522550	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.901	-	-	-	no_errors	NRCAM	HGNC	ENSG00000091129				139	0	0	103	12	10.4348
FOXP2	0	genome.wustl.edu	37	7	114298186	114298186	+	Silent	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	7	114298186	114298186	T	G	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	silent	c.1407	p.P469	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP2	HGNC	ENSG00000128573				118	0	0	122	10	7.57576
ESYT2	0	genome.wustl.edu	37	7	158531733	158531733	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	7	158531733	158531733	C	T	SNP	ESYT2	ENST00000251527	human	ensembl	74_37	-1	known	missense	c.2329	p.V777M	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	ESYT2	HGNC	ENSG00000117868				86	0	0	76	6	7.31707
SUN1	0	genome.wustl.edu	37	7	905675	905675	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	7	905675	905675	T	C	SNP	SUN1	ENST00000456758	human	ensembl	74_37	+1	known	missense	c.2518	p.F840L	1.000	pfam_Sad1_UNC_C	pfam_SUN1,pfam_Sad1_UNC_C	-	no_errors	SUN1	HGNC	ENSG00000164828				62	0	0	43	9	17.3077
PABPC1	0	genome.wustl.edu	37	8	101730110	101730110	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	8	101730110	101730110	A	C	SNP	PABPC1	ENST00000318607	human	ensembl	74_37	-1	known	missense	c.394	p.C132G	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC1	HGNC	ENSG00000070756				65	0	0	60	5	7.69231
CSMD3	0	genome.wustl.edu	37	8	114290851	114290851	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	8	114290851	114290851	T	C	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.484	p.S162G	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				68	0	0	61	11	15.2778
MED30	0	genome.wustl.edu	37	8	118552170	118552170	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	8	118552170	118552170	C	T	SNP	MED30	ENST00000297347	human	ensembl	74_37	+1	known	nonsense	c.490	p.R164*	1.000	pfam_Mediator_Med30_met	pfam_Mediator_Med30_met	-	no_errors	MED30	HGNC	ENSG00000164758				28	0	0	15	4	21.0526
ADCY8	0	genome.wustl.edu	37	8	131797714	131797714	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	8	131797714	131797714	C	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.3068	p.G1023V	0.652	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				66	0	0	42	4	8.69565
GPAA1	0	genome.wustl.edu	37	8	145139460	145139460	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	8	145139460	145139460	C	T	SNP	GPAA1	ENST00000355091	human	ensembl	74_37	+1	known	missense	c.958	p.R320C	0.801	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	-	no_errors	GPAA1	HGNC	ENSG00000197858				92	0	0	76	19	20
TUSC3	0	genome.wustl.edu	37	8	15519706	15519706	+	Silent	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	8	15519706	15519706	T	G	SNP	TUSC3	ENST00000503731	human	ensembl	74_37	+1	known	silent	c.609	p.A203	0.993	pfam_OligosaccharylTrfase_OST3/OST6	pfam_OligosaccharylTrfase_OST3/OST6,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TUSC3	HGNC	ENSG00000104723				133	0	0	112	6	5.08475
ZMYND19	0	genome.wustl.edu	37	9	140477600	140477600	+	Nonsense_Mutation	SNP	A	A	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	9	140477600	140477600	A	C	SNP	ZMYND19	ENST00000298585	human	ensembl	74_37	-1	known	nonsense	c.375	p.Y125*	1.000	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND19	HGNC	ENSG00000165724				249	0	0	188	14	6.93069
TEK	0	genome.wustl.edu	37	9	27172728	27172728	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	9	27172728	27172728	G	A	SNP	TEK	ENST00000380036	human	ensembl	74_37	+1	known	missense	c.743	p.G248E	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tyr_kin_Tie2_Ig-like_dom-1_N,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TEK	HGNC	ENSG00000120156				50	0	0	42	4	8.69565
ACTRT1	0	genome.wustl.edu	37	X	127185687	127185687	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	X	127185687	127185687	G	T	SNP	ACTRT1	ENST00000371124	human	ensembl	74_37	-1	known	missense	c.499	p.P167T	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT1	HGNC	ENSG00000123165				80	0	0	54	14	20.5882
GLRA2	0	genome.wustl.edu	37	X	14625361	14625361	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	X	14625361	14625361	T	G	SNP	GLRA2	ENST00000218075	human	ensembl	74_37	+1	known	missense	c.686	p.L229R	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A,prints_Glycine_rcpt_A2,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA2	HGNC	ENSG00000101958				69	0	0	57	19	25
ABCD1	0	genome.wustl.edu	37	X	152991318	152991318	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	X	152991318	152991318	G	T	SNP	ABCD1	ENST00000218104	human	ensembl	74_37	+1	known	missense	c.597	p.E199D	1.000	pfam_ABC_Peroxi_TM,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_FA_transporter	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_FA_transporter	-	no_errors	ABCD1	HGNC	ENSG00000101986				74	0	0	35	8	18.6047
CNKSR2	0	genome.wustl.edu	37	X	21627334	21627334	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	X	21627334	21627334	A	G	SNP	CNKSR2	ENST00000379510	human	ensembl	74_37	+1	known	missense	c.2291	p.Q764R	1.000	NULL	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR2	HGNC	ENSG00000149970				62	0	0	55	6	9.83607
PABPC5	0	genome.wustl.edu	37	X	90691563	90691563	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	X	90691563	90691563	T	A	SNP	PABPC5	ENST00000312600	human	ensembl	74_37	+1	known	missense	c.987	p.S329R	0.974	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC5	HGNC	ENSG00000174740				56	0	0	42	8	16
PABPC5	0	genome.wustl.edu	37	X	90691626	90691626	+	Silent	SNP	T	T	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	X	90691626	90691626	T	C	SNP	PABPC5	ENST00000312600	human	ensembl	74_37	+1	known	silent	c.1050	p.S350	0.974	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC5	HGNC	ENSG00000174740				42	0	0	31	9	22.5
FMN2	0	genome.wustl.edu	37	1	240370873	240370873	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	240370873	240370873	C	-	DEL	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	frame_shift_del	c.2761	p.P921fs	0.014	pfam_Formin_homology_1,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				123	0	0	131	17	11.4865
HS2ST1	0	genome.wustl.edu	37	1	87569239	87569239	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	1	87569239	87569239	T	-	DEL	HS2ST1	ENST00000370550	human	ensembl	74_37	+1	known	frame_shift_del	c.811	p.F272fs	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS2ST1	HGNC	ENSG00000153936				182	0	0	120	9	6.97674
RTKN2	0	genome.wustl.edu	37	10	64022582	64022583	+	Splice_Site	INS	-	-	A			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	10	64022582	64022583	-	A	INS	RTKN2	ENST00000373789	human	ensembl	74_37	-1	known	splice_site_ins	c.61-3_61-2	e2-2	1.000:0.881	-	-	-	no_errors	RTKN2	HGNC	ENSG00000182010				27	0	0	14	2	12.5
C12orf40	0	genome.wustl.edu	37	12	40020151	40020151	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	12	40020151	40020151	G	-	DEL	C12orf40	ENST00000324616	human	ensembl	74_37	+1	known	frame_shift_del	c.13	p.S7fs	1.000	NULL	NULL	-	no_errors	C12orf40	HGNC	ENSG00000180116				34	0	0	21	4	16
RBM25	0	genome.wustl.edu	37	14	73572607	73572608	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	14	73572607	73572608	AG	-	DEL	RBM25	ENST00000261973	human	ensembl	74_37	+1	known	frame_shift_del	c.1195_1196	p.E402fs	0.998:1.000	NULL	pfam_PWI_dom,pfam_RRM_dom,superfamily_PWI_dom,smart_RRM_dom,smart_PWI_dom,pfscan_RRM_dom	-	no_errors	RBM25	HGNC	ENSG00000119707				28	0	0	17	3	15
SLC12A3	0	genome.wustl.edu	37	16	56906327	56906328	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	16	56906327	56906328	-	C	INS	SLC12A3	ENST00000438926	human	ensembl	74_37	+1	known	frame_shift_ins	c.917_918	p.S309fs	1.000:0.994	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A3	HGNC	ENSG00000070915				58	0	0	48	6	11.1111
ENSG00000266156	0	genome.wustl.edu	37	19	20988370	20988370	+	RNA	DEL	T	T	-			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	19	20988370	20988370	T	-	DEL	ENSG00000266156	ENST00000582722	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC010329.1	Clone_based_ensembl_gene	ENSG00000266156				29	0	0	9	2	18.1818
RICTOR	0	genome.wustl.edu	37	5	38954825	38954826	+	RNA	INS	-	-	T			TCGA-BR-8590-01A-11D-2394-08	TCGA-BR-8590-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2040e830-a590-4b3b-a1e1-2addef74d2a3	974b3d0e-a371-4ac2-bf63-94ad2f7e6d44	5	38954825	38954826	-	T	INS	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327				31	0	0	23	5	17.8571
