Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
LRIF1	0	genome.wustl.edu	37	1	111494883	111494883	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	111494883	111494883	T	G	SNP	LRIF1	ENST00000369763	human	ensembl	74_37	-1	known	missense	c.623	p.K208T	1.000	NULL	NULL	-	no_errors	LRIF1	HGNC	ENSG00000121931				80	0	0	49	4	7.54717
ATAD3B	0	genome.wustl.edu	37	1	1423270	1423270	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	1423270	1423270	C	T	SNP	ATAD3B	ENST00000308647	human	ensembl	74_37	+1	known	silent	c.1242	p.D414	0.932	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD3B	HGNC	ENSG00000160072				132	0	0	75	13	14.7727
RPRD2	0	genome.wustl.edu	37	1	150429979	150429979	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	150429979	150429979	G	A	SNP	RPRD2	ENST00000369068	human	ensembl	74_37	+1	known	silent	c.1086	p.V362	0.055	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_CID_dom	-	no_errors	RPRD2	HGNC	ENSG00000163125				251	0	0	185	12	6.09137
FLG	0	genome.wustl.edu	37	1	152278830	152278830	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	152278830	152278830	C	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.8532	p.E2844D	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				758	0	0	188	41	17.9039
FLG	0	genome.wustl.edu	37	1	152278833	152278833	+	Silent	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	152278833	152278833	A	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.8529	p.N2843	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				731	0	0	188	26	12.1495
FLG	0	genome.wustl.edu	37	1	152279743	152279743	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	152279743	152279743	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.7619	p.R2540Q	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				427	0	0	127	21	14.1892
FLG	0	genome.wustl.edu	37	1	152279747	152279747	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	152279747	152279747	A	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.7615	p.S2539T	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				449	0	0	135	53	28.1915
IFI16	0	genome.wustl.edu	37	1	159023326	159023326	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	159023326	159023326	A	C	SNP	IFI16	ENST00000295809	human	ensembl	74_37	+1	known	missense	c.2089	p.N697H	0.031	pfam_HIN200/IF120x,pfscan_HIN200/IF120x	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565				84	0	0	29	46	61.3333
SLAMF1	0	genome.wustl.edu	37	1	160582344	160582344	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	160582344	160582344	G	T	SNP	SLAMF1	ENST00000302035	human	ensembl	74_37	-1	known	missense	c.891	p.F297L	0.000	NULL	pfam_Sig_lymph_act_molc_N,pfscan_Ig-like_dom	-	no_errors	SLAMF1	HGNC	ENSG00000117090				35	0	0	24	5	17.2414
TNR	0	genome.wustl.edu	37	1	175355276	175355276	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	175355276	175355276	T	C	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.1669	p.S557G	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				91	0	0	62	25	28.7356
NAV1	0	genome.wustl.edu	37	1	201687644	201687644	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	201687644	201687644	C	T	SNP	NAV1	ENST00000367296	human	ensembl	74_37	+1	known	silent	c.987	p.D329	0.661	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369				46	0	0	22	22	50
KIF17	0	genome.wustl.edu	37	1	20996955	20996955	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	20996955	20996955	C	A	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	missense	c.2752	p.A918S	0.014	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245				82	0	0	56	6	9.67742
MYOM3	0	genome.wustl.edu	37	1	24417475	24417475	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	24417475	24417475	T	C	SNP	MYOM3	ENST00000330966	human	ensembl	74_37	-1	known	missense	c.1247	p.E416G	0.512	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM3	HGNC	ENSG00000142661				89	0	0	47	10	17.5439
OR2M5	0	genome.wustl.edu	37	1	248309375	248309375	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	248309375	248309375	A	T	SNP	OR2M5	ENST00000366476	human	ensembl	74_37	+1	known	missense	c.926	p.K309M	0.001	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M5	HGNC	ENSG00000162727				83	0	0	24	36	60
ARID1A	0	genome.wustl.edu	37	1	27106124	27106124	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	27106124	27106124	A	C	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	missense	c.5735	p.D1912A	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				137	0	0	55	43	43.8776
MOB3C	0	genome.wustl.edu	37	1	47079042	47079042	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	47079042	47079042	C	A	SNP	MOB3C	ENST00000271139	human	ensembl	74_37	-1	known	missense	c.108	p.W36C	0.001	NULL	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB3C	HGNC	ENSG00000142961				88	0	0	38	22	36.6667
CYP2J2	0	genome.wustl.edu	37	1	60359208	60359208	+	RNA	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	60359208	60359208	G	A	SNP	CYP2J2	ENST00000466095	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CYP2J2	HGNC	ENSG00000134716				158	0	0	111	22	16.5414
CHD5	0	genome.wustl.edu	37	1	6169960	6169960	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	6169960	6169960	G	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.5473	p.L1825F	1.000	pfam_CHD_C2	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254				78	0	0	68	6	8.10811
KANK4	0	genome.wustl.edu	37	1	62739395	62739395	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	62739395	62739395	G	A	SNP	KANK4	ENST00000371153	human	ensembl	74_37	-1	known	missense	c.1381	p.H461Y	0.000	NULL	pfam_KN_motif,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK4	HGNC	ENSG00000132854				210	0	0	129	52	28.7293
SLC35D1	0	genome.wustl.edu	37	1	67486081	67486081	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	67486081	67486081	G	A	SNP	SLC35D1	ENST00000235345	human	ensembl	74_37	-1	known	missense	c.847	p.L283F	1.000	pfam_Tpt_PEP_trans_dom	pfam_Tpt_PEP_trans_dom	-	no_errors	SLC35D1	HGNC	ENSG00000116704				89	0	0	80	8	9.09091
C1orf173	0	genome.wustl.edu	37	1	75036970	75036970	+	Missense_Mutation	SNP	C	C	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	75036970	75036970	C	A	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	missense	c.4424	p.R1475L	0.000	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965				180	0	0	137	11	7.43243
PER3	0	genome.wustl.edu	37	1	7887798	7887798	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	7887798	7887798	T	G	SNP	PER3	ENST00000361923	human	ensembl	74_37	+1	known	missense	c.2785	p.L929V	0.001	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER3	HGNC	ENSG00000049246				107	0	0	70	14	16.6667
CLCA3P	0	genome.wustl.edu	37	1	87101306	87101306	+	RNA	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	1	87101306	87101306	T	G	SNP	CLCA3P	ENST00000284054	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.948	-	-	-	no_errors	CLCA3P	HGNC	ENSG00000153923				62	0	0	54	4	6.89655
CTBP2	0	genome.wustl.edu	37	10	126715032	126715032	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	126715032	126715032	A	G	SNP	CTBP2	ENST00000309035	human	ensembl	74_37	-1	known	missense	c.1297	p.F433L	0.000	NULL	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	CTBP2	HGNC	ENSG00000175029				30	0	0	12	6	33.3333
TUBGCP2	0	genome.wustl.edu	37	10	135099058	135099058	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	135099058	135099058	C	T	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	silent	c.1881	p.A627	0.197	pfam_TUBGCP	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640				24	0	0	12	4	25
KIAA1217	0	genome.wustl.edu	37	10	24784102	24784102	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	24784102	24784102	A	G	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	missense	c.1811	p.N604S	0.976	pfam_AIP3_C	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				82	0	0	42	28	40
MYO3A	0	genome.wustl.edu	37	10	26482150	26482150	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	26482150	26482150	G	T	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.4455	p.E1485D	0.964	NULL	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				69	0	0	36	10	21.7391
ENSG00000233515	0	genome.wustl.edu	37	10	43178893	43178893	+	RNA	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	43178893	43178893	A	C	SNP	ENSG00000233515	ENST00000411439	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.065	-	-	-	no_errors	AL022344.4	Clone_based_vega_gene	ENSG00000233515				8	0	0	4	3	42.8571
PCDH15	0	genome.wustl.edu	37	10	55912869	55912869	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	55912869	55912869	G	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.1775	p.A592E	0.942	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				66	0	0	51	10	16.3934
FAM208B	0	genome.wustl.edu	37	10	5784428	5784428	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	5784428	5784428	C	T	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.2696	p.A899V	0.001	pfam_DUF3715	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				83	0	0	71	6	7.79221
JMJD1C	0	genome.wustl.edu	37	10	64958329	64958329	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	64958329	64958329	T	G	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	missense	c.5435	p.K1812T	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				118	0	0	66	61	48.0315
GATA3	0	genome.wustl.edu	37	10	8115913	8115913	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	8115913	8115913	C	T	SNP	GATA3	ENST00000379328	human	ensembl	74_37	+1	known	missense	c.1262	p.T421M	1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485				123	0	0	93	16	14.6789
NOC3L	0	genome.wustl.edu	37	10	96104172	96104172	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	96104172	96104172	T	G	SNP	NOC3L	ENST00000371350	human	ensembl	74_37	-1	known	missense	c.1571	p.K524T	1.000	superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	pfam_CCAAT-binding_factor,pfam_NOC3p,superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	-	no_errors	NOC3L	HGNC	ENSG00000173145				64	0	0	31	16	34.0426
C10orf12	0	genome.wustl.edu	37	10	98744030	98744030	+	Silent	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	98744030	98744030	A	G	SNP	C10orf12	ENST00000286067	human	ensembl	74_37	+1	known	silent	c.2883	p.E961	0.737	NULL	NULL	-	no_errors	C10orf12	HGNC	ENSG00000155640				151	0	0	61	66	51.9685
ARHGAP19-SLIT1	0	genome.wustl.edu	37	10	99003882	99003882	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	99003882	99003882	T	G	SNP	ARHGAP19-SLIT1	ENST00000453547	human	ensembl	74_37	-1	known	missense	c.1028	p.K343T	0.859	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP19-SLIT1	HGNC	ENSG00000269891				84	0	0	56	19	25.3333
DYNC2H1	0	genome.wustl.edu	37	11	102984412	102984412	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	102984412	102984412	A	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.342	p.Q114H	0.990	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				52	0	0	30	6	16.6667
CTR9	0	genome.wustl.edu	37	11	10776559	10776559	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	10776559	10776559	G	A	SNP	CTR9	ENST00000361367	human	ensembl	74_37	+1	known	missense	c.199	p.A67T	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CTR9	HGNC	ENSG00000198730				103	0	0	85	5	5.55556
OR10S1	0	genome.wustl.edu	37	11	123848218	123848218	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	123848218	123848218	T	G	SNP	OR10S1	ENST00000531945	human	ensembl	74_37	-1	known	missense	c.181	p.T61P	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10S1	HGNC	ENSG00000196248				42	0	0	34	8	19.0476
ADAMTS15	0	genome.wustl.edu	37	11	130341245	130341245	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	130341245	130341245	G	T	SNP	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	missense	c.2045	p.C682F	1.000	prints_Peptidase_M12B_ADAM-TS	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106				78	0	0	24	14	36.8421
MPPED2	0	genome.wustl.edu	37	11	30557717	30557717	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	30557717	30557717	T	C	SNP	MPPED2	ENST00000358117	human	ensembl	74_37	-1	known	missense	c.134	p.D45G	1.000	NULL	pfam_PEstase_dom	-	no_errors	MPPED2	HGNC	ENSG00000066382				51	0	0	18	5	21.7391
LDLRAD3	0	genome.wustl.edu	37	11	36250770	36250770	+	Silent	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	36250770	36250770	A	G	SNP	LDLRAD3	ENST00000315571	human	ensembl	74_37	+1	known	silent	c.861	p.Q287	0.981	NULL	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LDLRAD3	HGNC	ENSG00000179241				267	0	0	191	17	8.17308
RAG1	0	genome.wustl.edu	37	11	36595301	36595301	+	Silent	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	36595301	36595301	T	G	SNP	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	silent	c.447	p.T149	0.640	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349				73	0	0	47	17	26.5625
LOC440040	0	genome.wustl.edu	37	11	49831598	49831598	+	RNA	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	49831598	49831598	G	T	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.183	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035				72	0	0	52	13	20
OR4A5	0	genome.wustl.edu	37	11	51412308	51412308	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	51412308	51412308	A	C	SNP	OR4A5	ENST00000319760	human	ensembl	74_37	-1	known	missense	c.88	p.L30V	0.057	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A5	HGNC	ENSG00000221840				38	0	0	34	12	26.087
OR4S2	0	genome.wustl.edu	37	11	55419250	55419250	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	55419250	55419250	G	T	SNP	OR4S2	ENST00000312422	human	ensembl	74_37	+1	known	nonsense	c.871	p.E291*	0.995	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982				132	0	0	57	40	41.2371
OR5D16	0	genome.wustl.edu	37	11	55606243	55606243	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	55606243	55606243	A	G	SNP	OR5D16	ENST00000378396	human	ensembl	74_37	+1	known	missense	c.16	p.R6G	0.142	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D16	HGNC	ENSG00000205029				102	0	0	46	39	45.8824
OR8J3	0	genome.wustl.edu	37	11	55905083	55905083	+	Missense_Mutation	SNP	T	T	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	55905083	55905083	T	A	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.112	p.T38S	0.105	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822				153	0	0	61	55	47.4138
OR5B3	0	genome.wustl.edu	37	11	58170447	58170447	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	58170447	58170447	A	G	SNP	OR5B3	ENST00000309403	human	ensembl	74_37	-1	known	missense	c.436	p.S146P	0.006	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5B3	HGNC	ENSG00000172769				123	0	0	75	22	22.6804
BAD	0	genome.wustl.edu	37	11	64037689	64037689	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	64037689	64037689	A	G	SNP	BAD	ENST00000309032	human	ensembl	74_37	-1	known	missense	c.499	p.S167P	0.994	pfam_Bcl-2_BAD	pfam_Bcl-2_BAD	-	no_errors	BAD	HGNC	ENSG00000002330				47	0	0	31	8	20.5128
CCDC88B	0	genome.wustl.edu	37	11	64112239	64112239	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	64112239	64112239	G	A	SNP	CCDC88B	ENST00000356786	human	ensembl	74_37	+1	known	silent	c.2226	p.E742	0.000	NULL	pfam_Hook-related_fam	-	no_errors	CCDC88B	HGNC	ENSG00000168071				65	0	0	33	4	10.8108
OR2D2	0	genome.wustl.edu	37	11	6912920	6912920	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	6912920	6912920	G	C	SNP	OR2D2	ENST00000299459	human	ensembl	74_37	-1	known	missense	c.812	p.S271W	0.034	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR2D2	HGNC	ENSG00000166368				57	0	0	25	32	56.1404
MED17	0	genome.wustl.edu	37	11	93542936	93542936	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	93542936	93542936	G	T	SNP	MED17	ENST00000251871	human	ensembl	74_37	+1	known	missense	c.1638	p.W546C	1.000	NULL	pfam_Mediator_Med17	-	no_errors	MED17	HGNC	ENSG00000042429				169	0	0	67	42	38.5321
CNTN5	0	genome.wustl.edu	37	11	99944940	99944940	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	11	99944940	99944940	A	C	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	missense	c.1494	p.E498D	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972				22	0	0	11	6	35.2941
LRP6	0	genome.wustl.edu	37	12	12334066	12334066	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	12334066	12334066	T	G	SNP	LRP6	ENST00000261349	human	ensembl	74_37	-1	known	missense	c.1284	p.E428D	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP6	HGNC	ENSG00000070018				84	0	0	47	32	40.5063
KRAS	0	genome.wustl.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	25398285	25398285	C	T	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.34	p.G12S	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703				18	0	0	11	7	38.8889
SYT10	0	genome.wustl.edu	37	12	33559774	33559774	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	33559774	33559774	C	G	SNP	SYT10	ENST00000228567	human	ensembl	74_37	-1	known	missense	c.1027	p.D343H	1.000	smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT10	HGNC	ENSG00000110975				75	0	0	64	9	12.3288
NDUFA9	0	genome.wustl.edu	37	12	4796211	4796211	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	4796211	4796211	C	T	SNP	NDUFA9	ENST00000266544	human	ensembl	74_37	+1	known	silent	c.1071	p.R357	0.876	NULL	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_NmrA	-	no_errors	NDUFA9	HGNC	ENSG00000139180				45	0	0	53	11	17.1875
AQP5	0	genome.wustl.edu	37	12	50358929	50358929	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	50358929	50358929	G	A	SNP	AQP5	ENST00000293599	human	ensembl	74_37	+1	known	missense	c.767	p.R256Q	1.000	prints_Aquaporin_5	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_5,tigrfam_MIP	-	no_errors	AQP5	HGNC	ENSG00000161798				29	0	0	29	3	9.375
CDK2	0	genome.wustl.edu	37	12	56364997	56364997	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	56364997	56364997	C	T	SNP	CDK2	ENST00000266970	human	ensembl	74_37	+1	known	missense	c.758	p.P253L	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK2	HGNC	ENSG00000123374				255	0	0	600	46	7.12074
LRP1	0	genome.wustl.edu	37	12	57578891	57578891	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	57578891	57578891	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	silent	c.6366	p.R2122	0.278	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				110	0	0	157	9	5.42169
METTL21B	0	genome.wustl.edu	37	12	58174298	58174298	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	58174298	58174298	A	C	SNP	METTL21B	ENST00000300209	human	ensembl	74_37	+1	known	missense	c.550	p.K184Q	0.992	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL21B	HGNC	ENSG00000123427				51	0	0	76	5	6.17284
XPOT	0	genome.wustl.edu	37	12	64814012	64814012	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	64814012	64814012	T	G	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	missense	c.652	p.L218V	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				99	0	0	124	20	13.8889
NUP107	0	genome.wustl.edu	37	12	69127260	69127260	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	69127260	69127260	A	C	SNP	NUP107	ENST00000229179	human	ensembl	74_37	+1	known	missense	c.2130	p.E710D	0.987	pfam_Nup84_Nup100	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581				78	0	0	366	25	6.39386
ACSS3	0	genome.wustl.edu	37	12	81472095	81472095	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	81472095	81472095	T	G	SNP	ACSS3	ENST00000548058	human	ensembl	74_37	+1	known	missense	c.196	p.F66V	0.999	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS3	HGNC	ENSG00000111058				61	0	0	34	8	19.0476
TMCC3	0	genome.wustl.edu	37	12	94972170	94972170	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	12	94972170	94972170	C	T	SNP	TMCC3	ENST00000261226	human	ensembl	74_37	-1	known	silent	c.1131	p.Q377	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2	-	no_errors	TMCC3	HGNC	ENSG00000057704				90	0	0	61	4	6.15385
ENSG00000243008	0	genome.wustl.edu	37	13	25155861	25155861	+	Splice_Site	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	13	25155861	25155861	G	A	SNP	ENSG00000243008	ENST00000453498	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.871	-	-	-	no_errors	RP11-556N21.1	Clone_based_vega_gene	ENSG00000243008				48	0	0	31	7	18.4211
NBEA	0	genome.wustl.edu	37	13	36125129	36125129	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	13	36125129	36125129	C	T	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.6766	p.R2256W	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				45	0	0	39	6	13.3333
SPG20	0	genome.wustl.edu	37	13	36888425	36888425	+	Silent	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	13	36888425	36888425	G	T	SNP	SPG20	ENST00000355182	human	ensembl	74_37	-1	known	silent	c.1422	p.T474	1.000	pfam_Senescence/spartin	pfam_Senescence/spartin,pfam_MIT,smart_MIT	-	no_errors	SPG20	HGNC	ENSG00000133104				122	0	0	90	26	22.4138
AHNAK2	0	genome.wustl.edu	37	14	105412260	105412260	+	Missense_Mutation	SNP	G	G	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	105412260	105412260	G	C	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.9528	p.D3176E	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				16	0	0	4	6	60
AHNAK2	0	genome.wustl.edu	37	14	105415659	105415659	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	105415659	105415659	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.6129	p.A2043	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				42	0	0	39	5	11.3636
OR4L1	0	genome.wustl.edu	37	14	20529098	20529098	+	Silent	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	20529098	20529098	A	C	SNP	OR4L1	ENST00000315683	human	ensembl	74_37	+1	known	silent	c.895	p.R299	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR4L1	HGNC	ENSG00000176246				82	0	0	61	4	6.15385
OSGEP	0	genome.wustl.edu	37	14	20920250	20920250	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	20920250	20920250	T	C	SNP	OSGEP	ENST00000206542	human	ensembl	74_37	-1	known	silent	c.294	p.Q98	0.969	pfam_Gcp-like_dom,prints_KAE1/YgjD,tigrfam_KAE1/YgjD	pfam_Gcp-like_dom,prints_KAE1/YgjD,tigrfam_KAE1/YgjD	-	no_errors	OSGEP	HGNC	ENSG00000092094				49	0	0	41	5	10.8696
SALL2	0	genome.wustl.edu	37	14	21991766	21991766	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	21991766	21991766	T	C	SNP	SALL2	ENST00000327430	human	ensembl	74_37	-1	known	missense	c.2096	p.K699R	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL2	HGNC	ENSG00000165821				86	0	0	42	29	40.8451
HECTD1	0	genome.wustl.edu	37	14	31637631	31637631	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	31637631	31637631	C	T	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	missense	c.1495	p.D499N	1.000	superfamily_ARM-type_fold	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148				132	0	0	114	20	14.9254
FAM179B	0	genome.wustl.edu	37	14	45432035	45432035	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	45432035	45432035	T	C	SNP	FAM179B	ENST00000361577	human	ensembl	74_37	+1	known	silent	c.411	p.Y137	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718				161	0	0	119	23	16.1972
PRKCH	0	genome.wustl.edu	37	14	61995851	61995851	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	61995851	61995851	T	G	SNP	PRKCH	ENST00000332981	human	ensembl	74_37	+1	known	missense	c.1492	p.F498V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCH	HGNC	ENSG00000027075				82	0	0	60	7	10.4478
MAP3K9	0	genome.wustl.edu	37	14	71209259	71209259	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	14	71209259	71209259	T	G	SNP	MAP3K9	ENST00000555993	human	ensembl	74_37	-1	known	missense	c.1376	p.K459T	1.000	pirsf_MAPKKK9/10/11,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_Regulat_G_prot_signal_superfam,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K9	HGNC	ENSG00000006432				54	0	0	30	3	9.09091
NUTM1	0	genome.wustl.edu	37	15	34648354	34648354	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	34648354	34648354	C	T	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	silent	c.2061	p.A687	0.000	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507				45	0	0	33	19	36.5385
DNAJC17	0	genome.wustl.edu	37	15	41066576	41066576	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	41066576	41066576	T	C	SNP	DNAJC17	ENST00000220496	human	ensembl	74_37	-1	known	missense	c.659	p.E220G	1.000	pfam_RRM_dom	pfam_DnaJ_domain,pfam_RRM_dom,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC17	HGNC	ENSG00000104129				220	0	0	152	38	20
UBR1	0	genome.wustl.edu	37	15	43308000	43308000	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	43308000	43308000	T	G	SNP	UBR1	ENST00000290650	human	ensembl	74_37	-1	known	missense	c.3095	p.K1032T	1.000	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459				116	0	0	113	6	5.04202
SLC24A5	0	genome.wustl.edu	37	15	48434341	48434341	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	48434341	48434341	A	C	SNP	SLC24A5	ENST00000341459	human	ensembl	74_37	+1	known	missense	c.1296	p.E432D	0.993	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A5	HGNC	ENSG00000188467				120	0	0	63	71	52.9851
MYEF2	0	genome.wustl.edu	37	15	48435202	48435202	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	48435202	48435202	A	C	SNP	MYEF2	ENST00000324324	human	ensembl	74_37	-1	known	missense	c.1706	p.F569C	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MYEF2	HGNC	ENSG00000104177				81	0	0	56	17	23.2877
SNAPC5	0	genome.wustl.edu	37	15	66787656	66787656	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	66787656	66787656	G	A	SNP	SNAPC5	ENST00000568875	human	ensembl	74_37	-1	known	silent	c.192	p.I64	0.000	NULL	NULL	-	no_errors	SNAPC5	HGNC	ENSG00000174446				63	0	0	61	8	11.5942
MYO9A	0	genome.wustl.edu	37	15	72244202	72244202	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	15	72244202	72244202	T	G	SNP	MYO9A	ENST00000424560	human	ensembl	74_37	-1	known	missense	c.2218	p.S740R	1.000	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933				149	0	0	107	26	19.5489
PDILT	0	genome.wustl.edu	37	16	20371934	20371934	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	20371934	20371934	A	G	SNP	PDILT	ENST00000302451	human	ensembl	74_37	-1	known	missense	c.1462	p.F488L	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	PDILT	HGNC	ENSG00000169340				205	0	0	119	45	27.439
ACSM2B	0	genome.wustl.edu	37	16	20566689	20566689	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	20566689	20566689	T	C	SNP	ACSM2B	ENST00000329697	human	ensembl	74_37	-1	known	silent	c.498	p.E166	0.133	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2B	HGNC	ENSG00000066813				233	0	0	168	50	22.9358
ACSM1	0	genome.wustl.edu	37	16	20702409	20702409	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	20702409	20702409	T	G	SNP	ACSM1	ENST00000307493	human	ensembl	74_37	-1	known	missense	c.102	p.E34D	0.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM1	HGNC	ENSG00000166743				191	0	0	128	57	30.8108
PKD1	0	genome.wustl.edu	37	16	2140438	2140438	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	2140438	2140438	C	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.12292	p.A4098T	0.743	pfam_PKD1_2_channel,prints_PKD_1	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				48	0	0	21	5	19.2308
ENSG00000259966	0	genome.wustl.edu	37	16	32616275	32616275	+	RNA	SNP	C	C	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	32616275	32616275	C	G	SNP	ENSG00000259966	ENST00000562976	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-652G5.1	Clone_based_vega_gene	ENSG00000259966				26	0	0	25	3	10.7143
HEATR3	0	genome.wustl.edu	37	16	50106621	50106621	+	Silent	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	50106621	50106621	A	G	SNP	HEATR3	ENST00000299192	human	ensembl	74_37	+1	known	silent	c.618	p.S206	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR3	HGNC	ENSG00000155393				33	0	0	36	6	14.2857
CHD9	0	genome.wustl.edu	37	16	53243432	53243432	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	53243432	53243432	T	C	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	silent	c.1491	p.Y497	0.910	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200				43	0	0	18	7	28
PLA2G15	0	genome.wustl.edu	37	16	68289889	68289889	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	68289889	68289889	T	G	SNP	PLA2G15	ENST00000566188	human	ensembl	74_37	+1	novel	missense	c.598	p.F200V	0.792	NULL	pfam_LACT/PDAT_acylTrfase	-	no_errors	PLA2G15	HGNC	ENSG00000103066				23	0	0	5	5	50
HYDIN	0	genome.wustl.edu	37	16	70917971	70917971	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	16	70917971	70917971	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.9831	p.S3277	0.236	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				23	0	0	10	4	28.5714
SUPT6H	0	genome.wustl.edu	37	17	27010097	27010097	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	27010097	27010097	A	G	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.1865	p.K622R	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				26	0	0	30	3	9.09091
SUPT6H	0	genome.wustl.edu	37	17	27014227	27014227	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	27014227	27014227	A	G	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.2822	p.K941R	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				137	0	0	128	53	29.2818
PHF12	0	genome.wustl.edu	37	17	27240011	27240011	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	27240011	27240011	C	T	SNP	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	silent	c.1578	p.A526	0.992	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118				120	0	0	109	22	16.7939
SSH2	0	genome.wustl.edu	37	17	27963194	27963194	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	27963194	27963194	T	G	SNP	SSH2	ENST00000269033	human	ensembl	74_37	-1	known	missense	c.1973	p.K658T	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298				130	0	0	54	64	54.2373
TRPV3	0	genome.wustl.edu	37	17	3422077	3422077	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	3422077	3422077	G	A	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	silent	c.1878	p.S626	0.007	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723				53	0	0	29	4	12.1212
TRPV3	0	genome.wustl.edu	37	17	3447882	3447882	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	3447882	3447882	T	C	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.302	p.N101S	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723				15	0	0	12	10	45.4545
KIF2B	0	genome.wustl.edu	37	17	51900831	51900831	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	51900831	51900831	A	T	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.437	p.K146M	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200				121	0	0	78	7	8.23529
BZRAP1	0	genome.wustl.edu	37	17	56403052	56403052	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	56403052	56403052	G	A	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.593	p.P198L	0.002	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				64	0	0	41	3	6.81818
CSH1	0	genome.wustl.edu	37	17	61972437	61972437	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	61972437	61972437	T	C	SNP	CSH1	ENST00000316193	human	ensembl	74_37	-1	known	missense	c.599	p.E200G	0.998	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	CSH1	HGNC	ENSG00000136488				136	0	0	103	17	14.1667
HELZ	0	genome.wustl.edu	37	17	65157118	65157118	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	65157118	65157118	A	G	SNP	HELZ	ENST00000358691	human	ensembl	74_37	-1	known	missense	c.1970	p.L657P	1.000	superfamily_P-loop_NTPase	pfam_Znf_CCCH,superfamily_P-loop_NTPase,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265				62	0	0	43	5	10.4167
TMC8	0	genome.wustl.edu	37	17	76134465	76134465	+	Silent	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	76134465	76134465	G	T	SNP	TMC8	ENST00000318430	human	ensembl	74_37	+1	known	silent	c.1569	p.R523	0.009	pfam_TMC	pfam_TMC	-	no_errors	TMC8	HGNC	ENSG00000167895				114	0	0	91	15	14.1509
RNF213	0	genome.wustl.edu	37	17	78357495	78357495	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	78357495	78357495	C	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.14089	p.P4697S	0.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				90	0	0	74	11	12.9412
PIK3R6	0	genome.wustl.edu	37	17	8731507	8731507	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	8731507	8731507	C	T	SNP	PIK3R6	ENST00000311434	human	ensembl	74_37	-1	known	silent	c.1314	p.R438	1.000	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R6	HGNC	ENSG00000174083				76	0	0	15	34	69.3878
GAS7	0	genome.wustl.edu	37	17	9837496	9837496	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	17	9837496	9837496	T	G	SNP	GAS7	ENST00000432992	human	ensembl	74_37	-1	known	missense	c.872	p.K291T	1.000	pfam_FCH_dom,smart_FCH_dom	pfam_FCH_dom,pfam_WW_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_FCH_dom,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_WW_dom	-	no_errors	GAS7	HGNC	ENSG00000007237				48	0	0	30	3	9.09091
CXADRP3	0	genome.wustl.edu	37	18	14479234	14479234	+	RNA	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	18	14479234	14479234	G	A	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766				31	0	0	13	10	43.4783
NWD1	0	genome.wustl.edu	37	19	16860249	16860249	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	16860249	16860249	G	A	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.796	p.G266S	0.980	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039				43	0	0	33	15	31.25
ZNF569	0	genome.wustl.edu	37	19	37905139	37905139	+	Silent	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	37905139	37905139	A	G	SNP	ZNF569	ENST00000316950	human	ensembl	74_37	-1	known	silent	c.421	p.L141	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF569	HGNC	ENSG00000196437				61	0	0	38	17	30.9091
SPTBN4	0	genome.wustl.edu	37	19	41077980	41077980	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	41077980	41077980	G	T	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.7375	p.D2459Y	1.000	pirsf_Spectrin_bsu,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460				362	0	0	147	72	32.8767
PSG6	0	genome.wustl.edu	37	19	43411761	43411761	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	43411761	43411761	T	C	SNP	PSG6	ENST00000292125	human	ensembl	74_37	-1	known	missense	c.952	p.I318V	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG6	HGNC	ENSG00000170848				205	0	0	123	30	19.6078
IRGC	0	genome.wustl.edu	37	19	44223718	44223718	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	44223718	44223718	C	T	SNP	IRGC	ENST00000244314	human	ensembl	74_37	+1	known	silent	c.1008	p.N336	0.000	pfam_Interferon-induced_GTPase	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	-	no_errors	IRGC	HGNC	ENSG00000124449				50	0	0	23	5	17.8571
PRKD2	0	genome.wustl.edu	37	19	47197269	47197269	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	47197269	47197269	T	C	SNP	PRKD2	ENST00000291281	human	ensembl	74_37	-1	known	missense	c.1439	p.E480G	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD2	HGNC	ENSG00000105287				68	0	0	43	5	10.4167
PRKD2	0	genome.wustl.edu	37	19	47207786	47207786	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	47207786	47207786	G	T	SNP	PRKD2	ENST00000291281	human	ensembl	74_37	-1	known	missense	c.632	p.T211N	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD2	HGNC	ENSG00000105287				54	0	0	30	12	28.5714
PPFIA3	0	genome.wustl.edu	37	19	49652922	49652922	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	49652922	49652922	C	T	SNP	PPFIA3	ENST00000334186	human	ensembl	74_37	+1	known	missense	c.3473	p.A1158V	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA3	HGNC	ENSG00000177380				38	0	0	25	7	21.875
LILRB1	0	genome.wustl.edu	37	19	55144500	55144500	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	55144500	55144500	A	T	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	missense	c.992	p.Q331L	0.000	smart_Ig_sub,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972				112	0	0	67	6	8.21918
ENSG00000215765	0	genome.wustl.edu	37	19	55301707	55301707	+	RNA	SNP	T	T	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	55301707	55301707	T	A	SNP	ENSG00000215765	ENST00000400864	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.234	-	-	-	no_errors	CTB-61M7.1	Clone_based_vega_gene	ENSG00000215765				31	0	0	25	7	21.875
TNNI3	0	genome.wustl.edu	37	19	55665449	55665449	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	55665449	55665449	G	A	SNP	TNNI3	ENST00000344887	human	ensembl	74_37	-1	known	silent	c.498	p.S166	1.000	pfam_Troponin	pfam_Troponin,pfam_Troponin-I_N	-	no_errors	TNNI3	HGNC	ENSG00000129991				95	0	0	62	32	34.0426
NLRP4	0	genome.wustl.edu	37	19	56370116	56370116	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	56370116	56370116	G	A	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	missense	c.1357	p.V453M	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505				145	0	0	91	34	27.2
NLRP8	0	genome.wustl.edu	37	19	56467184	56467184	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	56467184	56467184	T	C	SNP	NLRP8	ENST00000291971	human	ensembl	74_37	+1	known	missense	c.1760	p.L587P	0.004	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC	ENSG00000179709				71	0	0	22	16	42.1053
NLRP8	0	genome.wustl.edu	37	19	56467229	56467229	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	56467229	56467229	C	T	SNP	NLRP8	ENST00000291971	human	ensembl	74_37	+1	known	missense	c.1805	p.P602L	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC	ENSG00000179709				72	0	0	37	12	24.4898
ZNF135	0	genome.wustl.edu	37	19	58578360	58578360	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	58578360	58578360	A	C	SNP	ZNF135	ENST00000401053	human	ensembl	74_37	+1	known	missense	c.580	p.S194R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF135	HGNC	ENSG00000176293				64	0	0	44	4	8.33333
ZNF274	0	genome.wustl.edu	37	19	58724210	58724210	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	19	58724210	58724210	A	G	SNP	ZNF274	ENST00000326804	human	ensembl	74_37	+1	known	missense	c.1660	p.R554G	0.978	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF274	HGNC	ENSG00000171606				108	0	0	68	19	21.8391
KIF5C	0	genome.wustl.edu	37	2	149803436	149803436	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	149803436	149803436	A	C	SNP	KIF5C	ENST00000435030	human	ensembl	74_37	+1	known	missense	c.613	p.S205R	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF5C	HGNC	ENSG00000168280				36	0	0	7	15	68.1818
PLA2R1	0	genome.wustl.edu	37	2	160801450	160801450	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	160801450	160801450	C	T	SNP	PLA2R1	ENST00000283243	human	ensembl	74_37	-1	known	missense	c.4111	p.E1371K	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	PLA2R1	HGNC	ENSG00000153246				132	0	0	47	49	51.0417
LRP2	0	genome.wustl.edu	37	2	170136035	170136035	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	170136035	170136035	T	G	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.1412	p.N471T	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				90	0	0	29	41	58.5714
OSBPL6	0	genome.wustl.edu	37	2	179197734	179197734	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	179197734	179197734	C	T	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.560	p.S187L	1.000	NULL	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156				76	0	0	47	6	11.3208
MSGN1	0	genome.wustl.edu	37	2	17998186	17998186	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	17998186	17998186	A	T	SNP	MSGN1	ENST00000281047	human	ensembl	74_37	+1	known	missense	c.401	p.K134M	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MSGN1	HGNC	ENSG00000151379				50	0	0	40	7	14.8936
NUP35	0	genome.wustl.edu	37	2	184025818	184025818	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	184025818	184025818	A	C	SNP	NUP35	ENST00000295119	human	ensembl	74_37	+1	known	missense	c.940	p.S314R	1.000	pirsf_Nucleoporin_NUP53	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	-	no_errors	NUP35	HGNC	ENSG00000163002				39	0	0	24	3	11.1111
DNAH7	0	genome.wustl.edu	37	2	196834765	196834765	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	196834765	196834765	T	G	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.2112	p.E704D	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				76	0	0	44	6	12
SCG2	0	genome.wustl.edu	37	2	224462479	224462479	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	224462479	224462479	A	C	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	missense	c.1522	p.L508V	1.000	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951				116	0	0	47	23	32.8571
DNMT3A	0	genome.wustl.edu	37	2	25497834	25497834	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	25497834	25497834	C	T	SNP	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	silent	c.615	p.E205	1.000	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772				49	0	0	19	8	29.6296
IMMT	0	genome.wustl.edu	37	2	86406632	86406632	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	86406632	86406632	G	A	SNP	IMMT	ENST00000410111	human	ensembl	74_37	-1	known	missense	c.233	p.T78I	1.000	pfam_Mt-IM_prot_Mitofilin	pfam_Mt-IM_prot_Mitofilin	-	no_errors	IMMT	HGNC	ENSG00000132305				27	0	0	16	8	33.3333
TEKT4	0	genome.wustl.edu	37	2	95542476	95542476	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	2	95542476	95542476	C	T	SNP	TEKT4	ENST00000295201	human	ensembl	74_37	+1	known	missense	c.1270	p.R424C	0.689	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT4	HGNC	ENSG00000163060				53	0	0	32	5	13.5135
CSRP2BP	0	genome.wustl.edu	37	20	18142527	18142527	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	18142527	18142527	G	A	SNP	CSRP2BP	ENST00000435364	human	ensembl	74_37	+1	known	missense	c.746	p.R249Q	1.000	NULL	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	CSRP2BP	HGNC	ENSG00000149474				167	0	0	152	33	17.8378
RPN2	0	genome.wustl.edu	37	20	35858392	35858392	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	35858392	35858392	A	G	SNP	RPN2	ENST00000237530	human	ensembl	74_37	+1	known	missense	c.1511	p.K504R	1.000	pfam_Swp1	pfam_Swp1	-	no_errors	RPN2	HGNC	ENSG00000118705				101	0	0	43	7	14
PIGT	0	genome.wustl.edu	37	20	44045194	44045194	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	44045194	44045194	G	A	SNP	PIGT	ENST00000279036	human	ensembl	74_37	+1	known	silent	c.225	p.Q75	0.999	pfam_PIG-T	pfam_PIG-T	-	no_errors	PIGT	HGNC	ENSG00000124155				46	0	0	23	6	20.6897
NTSR1	0	genome.wustl.edu	37	20	61391604	61391604	+	Silent	SNP	C	C	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	61391604	61391604	C	A	SNP	NTSR1	ENST00000370501	human	ensembl	74_37	+1	known	silent	c.1242	p.R414	0.996	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_NT1_rcpt,prints_GPCR_Rhodpsn,prints_NT_rcpt	-	no_errors	NTSR1	HGNC	ENSG00000101188				60	0	0	56	310	84.6995
MYT1	0	genome.wustl.edu	37	20	62839769	62839769	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	62839769	62839769	A	G	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	missense	c.1220	p.Q407R	0.078	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132				49	0	0	146	10	6.41026
ANGPT4	0	genome.wustl.edu	37	20	853672	853672	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	853672	853672	C	T	SNP	ANGPT4	ENST00000381922	human	ensembl	74_37	-1	known	nonsense	c.1443	p.W481*	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT4	HGNC	ENSG00000101280				63	0	0	66	26	28.2609
RSPO4	0	genome.wustl.edu	37	20	948593	948593	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	20	948593	948593	T	G	SNP	RSPO4	ENST00000217260	human	ensembl	74_37	-1	known	missense	c.268	p.K90Q	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO4	HGNC	ENSG00000101282				126	0	0	130	19	12.7517
LTN1	0	genome.wustl.edu	37	21	30316135	30316135	+	Silent	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	21	30316135	30316135	T	G	SNP	LTN1	ENST00000389194	human	ensembl	74_37	-1	known	silent	c.4212	p.L1404	0.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862				156	0	0	62	32	34.0426
ITSN1	0	genome.wustl.edu	37	21	35190767	35190767	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	21	35190767	35190767	A	G	SNP	ITSN1	ENST00000381285	human	ensembl	74_37	+1	known	missense	c.2924	p.K975R	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,superfamily_P-loop_NTPase,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN1	HGNC	ENSG00000205726				162	0	0	142	11	7.18954
DOPEY2	0	genome.wustl.edu	37	21	37650614	37650614	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	21	37650614	37650614	T	C	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	missense	c.5930	p.L1977P	1.000	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197				85	0	0	67	25	27.1739
TEKT4P2	0	genome.wustl.edu	37	21	9907316	9907316	+	RNA	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	21	9907316	9907316	G	T	SNP	TEKT4P2	ENST00000416067	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TEKT4P2	HGNC	ENSG00000188681				58	0	0	30	3	9.09091
POTEH	0	genome.wustl.edu	37	22	16287661	16287661	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	16287661	16287661	G	A	SNP	POTEH	ENST00000343518	human	ensembl	74_37	-1	known	silent	c.225	p.S75	0.081	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEH	HGNC	ENSG00000198062				17	0	0	21	5	19.2308
GNAZ	0	genome.wustl.edu	37	22	23465312	23465312	+	Missense_Mutation	SNP	C	C	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	23465312	23465312	C	G	SNP	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	missense	c.762	p.I254M	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				91	0	0	64	22	25.5814
GNAZ	0	genome.wustl.edu	37	22	23465478	23465478	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	23465478	23465478	G	A	SNP	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	missense	c.928	p.D310N	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				40	0	0	61	5	7.57576
TFIP11	0	genome.wustl.edu	37	22	26895380	26895380	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	26895380	26895380	C	T	SNP	TFIP11	ENST00000405938	human	ensembl	74_37	-1	known	missense	c.1019	p.R340Q	1.000	NULL	pfam_GCFC_dom,pfam_TIP_N,pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	TFIP11	HGNC	ENSG00000100109				103	0	0	71	16	18.3908
NF2	0	genome.wustl.edu	37	22	30074212	30074212	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	30074212	30074212	C	T	SNP	NF2	ENST00000338641	human	ensembl	74_37	+1	known	missense	c.1474	p.P492S	1.000	pirsf_ERM,pfam_ERM_C_dom	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,pfscan_FERM_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,prints_Tropomyosin	-	no_errors	NF2	HGNC	ENSG00000186575				146	0	0	74	38	33.9286
ENSG00000233080	0	genome.wustl.edu	37	22	35590865	35590865	+	RNA	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	35590865	35590865	G	T	SNP	ENSG00000233080	ENST00000423311	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTA-714B7.5	Clone_based_vega_gene	ENSG00000233080				24	0	0	14	7	33.3333
PACSIN2	0	genome.wustl.edu	37	22	43287027	43287027	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	43287027	43287027	C	T	SNP	PACSIN2	ENST00000263246	human	ensembl	74_37	-1	known	missense	c.379	p.G127S	0.985	NULL	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN2	HGNC	ENSG00000100266				57	0	0	35	4	10.2564
CELSR1	0	genome.wustl.edu	37	22	46804928	46804928	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	22	46804928	46804928	C	T	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.5191	p.A1731T	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				44	0	0	17	5	22.7273
KIAA1407	0	genome.wustl.edu	37	3	113753894	113753894	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	3	113753894	113753894	T	G	SNP	KIAA1407	ENST00000295878	human	ensembl	74_37	-1	known	missense	c.696	p.Q232H	1.000	NULL	NULL	-	no_errors	KIAA1407	HGNC	ENSG00000163617				123	0	0	97	36	27.0677
RHO	0	genome.wustl.edu	37	3	129251538	129251538	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	3	129251538	129251538	T	G	SNP	RHO	ENST00000296271	human	ensembl	74_37	+1	known	missense	c.859	p.F287V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin,prints_Opsin	pfam_GPCR_Rhodpsn,pfam_Rhodopsin_N,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	RHO	HGNC	ENSG00000163914				69	0	0	48	11	18.6441
KIF15	0	genome.wustl.edu	37	3	44842992	44842992	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	3	44842992	44842992	T	G	SNP	KIF15	ENST00000326047	human	ensembl	74_37	+1	known	missense	c.1273	p.F425V	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF15	HGNC	ENSG00000163808				87	0	0	46	17	26.9841
BSN	0	genome.wustl.edu	37	3	49680049	49680049	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	3	49680049	49680049	A	C	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.982	p.S328R	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061				40	0	0	3	14	82.3529
TACR3	0	genome.wustl.edu	37	4	104577395	104577395	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	104577395	104577395	C	T	SNP	TACR3	ENST00000304883	human	ensembl	74_37	-1	known	missense	c.844	p.D282N	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt,prints_Neurokn_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NK1_rcpt	-	no_errors	TACR3	HGNC	ENSG00000169836				110	1	0.900901	113	11	8.87097
COL25A1	0	genome.wustl.edu	37	4	110223041	110223041	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	110223041	110223041	G	A	SNP	COL25A1	ENST00000399132	human	ensembl	74_37	-1	known	silent	c.135	p.A45	0.486	NULL	pfam_Collagen	-	no_errors	COL25A1	HGNC	ENSG00000188517				119	0	0	76	20	20.8333
DDX60	0	genome.wustl.edu	37	4	169138150	169138150	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	169138150	169138150	G	A	SNP	DDX60	ENST00000393743	human	ensembl	74_37	-1	known	silent	c.5073	p.D1691	0.765	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628				78	0	0	53	16	23.1884
FAT1	0	genome.wustl.edu	37	4	187554958	187554958	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	187554958	187554958	G	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	silent	c.4203	p.H1401	0.968	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				110	0	0	63	13	17.1053
TRIML2	0	genome.wustl.edu	37	4	189012817	189012817	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	189012817	189012817	T	C	SNP	TRIML2	ENST00000512729	human	ensembl	74_37	-1	known	missense	c.874	p.T292A	0.002	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIML2	HGNC	ENSG00000179046				305	1	0.326797	194	12	5.82524
SLIT2	0	genome.wustl.edu	37	4	20591350	20591350	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	20591350	20591350	A	G	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.3172	p.K1058E	0.994	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				25	0	0	13	4	23.5294
TBC1D1	0	genome.wustl.edu	37	4	38046040	38046040	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	38046040	38046040	T	G	SNP	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	missense	c.1471	p.F491V	0.985	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882				97	0	0	92	25	21.3675
RBM47	0	genome.wustl.edu	37	4	40440178	40440178	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	40440178	40440178	C	T	SNP	RBM47	ENST00000295971	human	ensembl	74_37	-1	known	missense	c.733	p.V245M	1.000	tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	RBM47	HGNC	ENSG00000163694				138	0	0	87	47	35.0746
ATP10D	0	genome.wustl.edu	37	4	47582421	47582421	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	47582421	47582421	T	C	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	silent	c.3574	p.L1192	0.051	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				219	0	0	172	10	5.49451
KIT	0	genome.wustl.edu	37	4	55561768	55561768	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	55561768	55561768	A	G	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	missense	c.158	p.E53G	0.002	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,smart_Ig_sub	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404				86	0	0	52	17	24.6377
EVC2	0	genome.wustl.edu	37	4	5586387	5586387	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	5586387	5586387	T	C	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.3020	p.K1007R	0.032	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				37	0	0	29	4	12.1212
STAP1	0	genome.wustl.edu	37	4	68447130	68447130	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	68447130	68447130	C	T	SNP	STAP1	ENST00000265404	human	ensembl	74_37	+1	known	silent	c.471	p.S157	0.000	NULL	pfam_SH2,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_SH2	-	no_errors	STAP1	HGNC	ENSG00000035720				167	0	0	85	79	48.1707
THAP9	0	genome.wustl.edu	37	4	83838294	83838294	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	4	83838294	83838294	T	G	SNP	THAP9	ENST00000302236	human	ensembl	74_37	+1	known	missense	c.929	p.L310R	0.841	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP9	HGNC	ENSG00000168152				141	0	0	153	11	6.70732
AQPEP	0	genome.wustl.edu	37	5	115335576	115335576	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	115335576	115335576	T	G	SNP	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	missense	c.1492	p.F498V	0.989	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901				65	0	0	62	4	6.06061
DMXL1	0	genome.wustl.edu	37	5	118484481	118484481	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	118484481	118484481	T	G	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	missense	c.2959	p.L987V	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869				100	0	0	71	10	12.3457
CDC25C	0	genome.wustl.edu	37	5	137622934	137622934	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	137622934	137622934	T	G	SNP	CDC25C	ENST00000323760	human	ensembl	74_37	-1	known	missense	c.950	p.K317T	1.000	superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,prints_MPI_Phosphatase	pfam_MPI_Phosphatase,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom,prints_MPI_Phosphatase	-	no_errors	CDC25C	HGNC	ENSG00000158402				53	0	0	33	9	21.4286
PCDHA10	0	genome.wustl.edu	37	5	140236750	140236750	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	140236750	140236750	G	A	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.1117	p.V373I	0.999	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				153	0	0	83	21	20.1923
PCDHB5	0	genome.wustl.edu	37	5	140516360	140516360	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	140516360	140516360	C	T	SNP	PCDHB5	ENST00000231134	human	ensembl	74_37	+1	known	silent	c.1344	p.P448	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209				264	0	0	146	44	23.1579
ANKH	0	genome.wustl.edu	37	5	14713673	14713673	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	14713673	14713673	G	A	SNP	ANKH	ENST00000284268	human	ensembl	74_37	-1	known	silent	c.1245	p.L415	0.746	NULL	pfam_ANKH	-	no_errors	ANKH	HGNC	ENSG00000154122				39	0	0	50	4	7.40741
BTNL8	0	genome.wustl.edu	37	5	180374616	180374616	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	180374616	180374616	A	G	SNP	BTNL8	ENST00000340184	human	ensembl	74_37	+1	known	missense	c.778	p.K260E	0.008	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTNL8	HGNC	ENSG00000113303				319	0	0	403	39	8.82353
BTNL8	0	genome.wustl.edu	37	5	180375359	180375359	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	180375359	180375359	A	C	SNP	BTNL8	ENST00000340184	human	ensembl	74_37	+1	known	missense	c.792	p.K264N	0.025	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTNL8	HGNC	ENSG00000113303				173	0	0	198	25	11.2108
BTNL8	0	genome.wustl.edu	37	5	180377026	180377026	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	180377026	180377026	A	G	SNP	BTNL8	ENST00000340184	human	ensembl	74_37	+1	known	missense	c.985	p.S329G	0.001	superfamily_ConA-like_lec_gl_sf,smart_PRY,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTNL8	HGNC	ENSG00000113303				46	0	0	52	6	10.3448
BTNL8	0	genome.wustl.edu	37	5	180377398	180377398	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	180377398	180377398	A	C	SNP	BTNL8	ENST00000340184	human	ensembl	74_37	+1	known	missense	c.1357	p.N453H	0.187	superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTNL8	HGNC	ENSG00000113303				91	0	0	103	19	15.5738
BTNL8	0	genome.wustl.edu	37	5	180377443	180377443	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	180377443	180377443	A	G	SNP	BTNL8	ENST00000340184	human	ensembl	74_37	+1	known	missense	c.1402	p.K468E	0.000	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTNL8	HGNC	ENSG00000113303				83	0	0	85	12	12.3711
IRX4	0	genome.wustl.edu	37	5	1879701	1879701	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	1879701	1879701	T	G	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	missense	c.653	p.K218T	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430				72	0	0	58	10	14.7059
ZDHHC11	0	genome.wustl.edu	37	5	840653	840653	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	840653	840653	G	A	SNP	ZDHHC11	ENST00000283441	human	ensembl	74_37	-1	known	silent	c.741	p.G247	0.001	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11	HGNC	ENSG00000188818				298	1	0.334448	242	32	11.6788
RSPH4A	0	genome.wustl.edu	37	6	116948943	116948943	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	116948943	116948943	A	T	SNP	RSPH4A	ENST00000229554	human	ensembl	74_37	+1	known	missense	c.1073	p.K358M	1.000	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH4A	HGNC	ENSG00000111834				102	0	0	69	17	19.7674
PEX3	0	genome.wustl.edu	37	6	143793448	143793448	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	143793448	143793448	A	G	SNP	PEX3	ENST00000367591	human	ensembl	74_37	+1	known	missense	c.730	p.T244A	1.000	pfam_Peroxin-3	pfam_Peroxin-3	-	no_errors	PEX3	HGNC	ENSG00000034693				58	0	0	53	8	13.1148
OR14J1	0	genome.wustl.edu	37	6	29274938	29274938	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	29274938	29274938	G	A	SNP	OR14J1	ENST00000377160	human	ensembl	74_37	+1	known	missense	c.472	p.A158T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14J1	HGNC	ENSG00000204695				154	1	0.645161	153	14	8.38323
BTBD9	0	genome.wustl.edu	37	6	38561952	38561952	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	38561952	38561952	A	G	SNP	BTBD9	ENST00000403056	human	ensembl	74_37	-1	known	missense	c.337	p.F113L	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_BTB_POZ,pfam_BACK,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_BTB/POZ_fold,superfamily_Galactose-bd-like,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD9	HGNC	ENSG00000183826				283	0	0	201	61	23.2824
HSP90AB1	0	genome.wustl.edu	37	6	44217547	44217547	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	44217547	44217547	T	G	SNP	HSP90AB1	ENST00000353801	human	ensembl	74_37	+1	known	missense	c.490	p.S164A	1.000	pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam	pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	-	no_errors	HSP90AB1	HGNC	ENSG00000096384				291	0	0	229	80	25.89
PTCHD4	0	genome.wustl.edu	37	6	47847079	47847079	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	47847079	47847079	T	C	SNP	PTCHD4	ENST00000339488	human	ensembl	74_37	-1	known	missense	c.1501	p.S501G	0.996	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD4	HGNC	ENSG00000244694				42	0	0	13	11	45.8333
PKHD1	0	genome.wustl.edu	37	6	51890809	51890809	+	Missense_Mutation	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	51890809	51890809	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.3799	p.A1267T	0.007	superfamily_Ig_E-set,smart_IPT	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				62	0	0	42	13	23.6364
KIAA1586	0	genome.wustl.edu	37	6	56918933	56918933	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	56918933	56918933	A	G	SNP	KIAA1586	ENST00000370733	human	ensembl	74_37	+1	known	missense	c.1636	p.R546G	1.000	superfamily_RNaseH-like_dom	superfamily_RNaseH-like_dom	-	no_errors	KIAA1586	HGNC	ENSG00000168116				47	0	0	23	16	41.0256
BAI3	0	genome.wustl.edu	37	6	69348663	69348663	+	Silent	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	69348663	69348663	T	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.96	p.T32	1.000	pfscan_CUB_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				83	0	0	69	5	6.75676
COL12A1	0	genome.wustl.edu	37	6	75862083	75862083	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	75862083	75862083	T	C	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	silent	c.3681	p.E1227	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				65	0	0	30	7	18.9189
ANKRD6	0	genome.wustl.edu	37	6	90326294	90326294	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	90326294	90326294	T	G	SNP	ANKRD6	ENST00000339746	human	ensembl	74_37	+1	known	missense	c.632	p.L211R	0.999	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD6	HGNC	ENSG00000135299				76	0	0	42	20	32.2581
POLR2J3	0	genome.wustl.edu	37	7	102212758	102212758	+	RNA	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	102212758	102212758	G	T	SNP	POLR2J3	ENST00000504157	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	POLR2J3	HGNC	ENSG00000168255				52	0	0	27	9	25
PIK3CG	0	genome.wustl.edu	37	7	106509364	106509364	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	106509364	106509364	A	G	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	missense	c.1358	p.E453G	0.993	pfam_PI3K_C2_dom,superfamily_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851				98	0	0	68	13	16.0494
ZNF425	0	genome.wustl.edu	37	7	148801027	148801027	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	148801027	148801027	T	G	SNP	ZNF425	ENST00000378061	human	ensembl	74_37	-1	known	missense	c.1936	p.S646R	0.865	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947				200	0	0	127	17	11.8056
INTS4L2	0	genome.wustl.edu	37	7	65160128	65160128	+	RNA	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	65160128	65160128	T	G	SNP	INTS4L2	ENST00000430126	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	INTS4L2	HGNC	ENSG00000232270				45	0	0	9	3	25
CRCP	0	genome.wustl.edu	37	7	65579838	65579838	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	65579838	65579838	A	G	SNP	CRCP	ENST00000431089	human	ensembl	74_37	+1	putative	missense	c.23	p.E8G	0.988	NULL	pfam_RNA_pol_II_Rpb4,superfamily_HRDC-like,smart_RNA_pol_II_Rpb4_core	-	no_errors	CRCP	HGNC	ENSG00000241258				47	0	0	43	4	8.51064
GTF2IRD2	0	genome.wustl.edu	37	7	74211859	74211859	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	74211859	74211859	C	T	SNP	GTF2IRD2	ENST00000405086	human	ensembl	74_37	-1	known	silent	c.1992	p.K664	0.135	superfamily_RNaseH-like_dom	pfam_GTF2I,superfamily_GTF2I,superfamily_RNaseH-like_dom,pfscan_GTF2I	-	no_errors	GTF2IRD2	HGNC	ENSG00000196275				49	0	0	37	13	26
HSPB1	0	genome.wustl.edu	37	7	75932122	75932122	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	75932122	75932122	G	A	SNP	HSPB1	ENST00000248553	human	ensembl	74_37	+1	known	silent	c.93	p.Q31	1.000	prints_Alpha-crystallin/HSP	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB1	HGNC	ENSG00000106211				17	0	0	11	3	21.4286
ABCB1	0	genome.wustl.edu	37	7	87160630	87160630	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	87160630	87160630	C	A	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	nonsense	c.2665	p.E889*	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563				106	0	0	85	14	14.1414
GSDMC	0	genome.wustl.edu	37	8	130760962	130760962	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	8	130760962	130760962	A	C	SNP	GSDMC	ENST00000276708	human	ensembl	74_37	-1	known	missense	c.1312	p.F438V	1.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMC	HGNC	ENSG00000147697				66	0	0	63	11	14.8649
FAM135B	0	genome.wustl.edu	37	8	139144979	139144979	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	8	139144979	139144979	T	C	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.4078	p.T1360A	1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				282	0	0	301	29	8.78788
RUNX1T1	0	genome.wustl.edu	37	8	92998514	92998514	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	8	92998514	92998514	G	A	SNP	RUNX1T1	ENST00000436581	human	ensembl	74_37	-1	known	nonsense	c.1150	p.R384*	1.000	pfam_NHR2	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG8	-	no_errors	RUNX1T1	HGNC	ENSG00000079102				127	0	0	140	9	6.04027
GABBR2	0	genome.wustl.edu	37	9	101125010	101125010	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	9	101125010	101125010	T	G	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	missense	c.1880	p.K627T	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928				48	0	0	16	16	50
FKTN	0	genome.wustl.edu	37	9	108397526	108397526	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	9	108397526	108397526	A	G	SNP	FKTN	ENST00000223528	human	ensembl	74_37	+1	known	missense	c.1367	p.E456G	1.000	NULL	pfam_LicD,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom	-	no_errors	FKTN	HGNC	ENSG00000106692				84	0	0	55	34	38.2022
TNFSF8	0	genome.wustl.edu	37	9	117692483	117692483	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	9	117692483	117692483	G	A	SNP	TNFSF8	ENST00000223795	human	ensembl	74_37	-1	known	missense	c.101	p.T34M	0.349	pirsf_TNF_CD30_ligand_type	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_CD30_ligand_type,pfscan_TNF_dom	-	no_errors	TNFSF8	HGNC	ENSG00000106952				130	0	0	64	69	51.8797
CERCAM	0	genome.wustl.edu	37	9	131196814	131196814	+	Missense_Mutation	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	9	131196814	131196814	A	G	SNP	CERCAM	ENST00000372838	human	ensembl	74_37	+1	known	missense	c.1457	p.K486R	1.000	pfam_Glyco_trans_25	pfam_Glyco_trans_25	-	no_errors	CERCAM	HGNC	ENSG00000167123				69	0	0	51	4	7.27273
PPP1R26	0	genome.wustl.edu	37	9	138377178	138377178	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	9	138377178	138377178	G	A	SNP	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	silent	c.822	p.V274	0.000	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422				253	0	0	92	85	48.0226
IFNA17	0	genome.wustl.edu	37	9	21227998	21227998	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	9	21227998	21227998	A	T	SNP	IFNA17	ENST00000413767	human	ensembl	74_37	-1	known	missense	c.175	p.F59I	0.176	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA17	HGNC	ENSG00000234829				230	0	0	154	9	5.52147
NOX1	0	genome.wustl.edu	37	X	100117182	100117182	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	100117182	100117182	T	C	SNP	NOX1	ENST00000372966	human	ensembl	74_37	-1	known	missense	c.782	p.K261R	0.026	NULL	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX1	HGNC	ENSG00000007952				195	0	0	111	31	21.831
NXF5	0	genome.wustl.edu	37	X	101095862	101095862	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	101095862	101095862	C	T	SNP	NXF5	ENST00000263032	human	ensembl	74_37	-1	known	silent	c.486	p.L162	0.281	NULL	pfam_Tap_RNA-bd	-	no_errors	NXF5	HGNC	ENSG00000126952				96	0	0	67	9	11.8421
ARMCX5	0	genome.wustl.edu	37	X	101857231	101857231	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	101857231	101857231	T	C	SNP	ARMCX5	ENST00000246174	human	ensembl	74_37	+1	known	silent	c.162	p.A54	0.037	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	ARMCX5	HGNC	ENSG00000125962				82	0	0	59	9	13.2353
BHLHB9	0	genome.wustl.edu	37	X	102004547	102004547	+	Silent	SNP	A	A	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	102004547	102004547	A	G	SNP	BHLHB9	ENST00000361229	human	ensembl	74_37	+1	known	silent	c.624	p.K208	0.962	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	BHLHB9	HGNC	ENSG00000198908				294	0	0	185	46	19.9134
NXF3	0	genome.wustl.edu	37	X	102337226	102337226	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	102337226	102337226	T	G	SNP	NXF3	ENST00000395065	human	ensembl	74_37	-1	known	missense	c.847	p.S283R	0.003	NULL	pfam_Tap_RNA-bd,pfam_NTF2,pfscan_Nuclear_transport_factor_2_euk	-	no_errors	NXF3	HGNC	ENSG00000147206				256	0	0	165	39	19.1176
ACSL4	0	genome.wustl.edu	37	X	108887374	108887374	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	108887374	108887374	T	C	SNP	ACSL4	ENST00000340800	human	ensembl	74_37	-1	known	missense	c.2020	p.S674G	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL4	HGNC	ENSG00000068366				92	0	0	79	21	21
DOCK11	0	genome.wustl.edu	37	X	117788650	117788650	+	Missense_Mutation	SNP	A	A	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	117788650	117788650	A	T	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	missense	c.4781	p.E1594V	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251				107	0	0	70	22	23.913
TENM1	0	genome.wustl.edu	37	X	123657356	123657356	+	Missense_Mutation	SNP	A	A	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	123657356	123657356	A	C	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.2891	p.V964G	0.997	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694				123	0	0	68	35	33.9806
DCAF12L2	0	genome.wustl.edu	37	X	125298907	125298907	+	Missense_Mutation	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	125298907	125298907	G	A	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	missense	c.1001	p.P334L	0.997	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354				149	0	0	79	48	37.7953
CXorf40A	0	genome.wustl.edu	37	X	148627278	148627278	+	Missense_Mutation	SNP	G	G	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	148627278	148627278	G	T	SNP	CXorf40A	ENST00000359293	human	ensembl	74_37	+1	known	missense	c.102	p.Q34H	0.001	superfamily_PUA-like_domain	superfamily_PUA-like_domain	-	no_errors	CXorf40A	HGNC	ENSG00000197620				92	0	0	48	8	14.2857
GABRQ	0	genome.wustl.edu	37	X	151817720	151817720	+	Silent	SNP	C	C	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	151817720	151817720	C	T	SNP	GABRQ	ENST00000370306	human	ensembl	74_37	+1	known	silent	c.534	p.T178	0.127	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAt_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABAAb_rcpt,prints_GABAAa_rcpt,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRQ	HGNC	ENSG00000147402				145	0	0	75	8	9.63855
PLXNB3	0	genome.wustl.edu	37	X	153042361	153042361	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	153042361	153042361	T	G	SNP	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	missense	c.4922	p.V1641G	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753				15	0	0	8	4	33.3333
MAGEB18	0	genome.wustl.edu	37	X	26157256	26157256	+	Silent	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	26157256	26157256	T	C	SNP	MAGEB18	ENST00000325250	human	ensembl	74_37	+1	known	silent	c.154	p.L52	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB18	HGNC	ENSG00000176774				69	0	0	55	6	9.83607
ZNF674	0	genome.wustl.edu	37	X	46360233	46360233	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	46360233	46360233	T	G	SNP	ZNF674	ENST00000523374	human	ensembl	74_37	-1	known	missense	c.791	p.K264T	0.002	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF674	HGNC	ENSG00000251192				14	0	0	15	7	31.8182
CACNA1F	0	genome.wustl.edu	37	X	49061780	49061780	+	Silent	SNP	G	G	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	49061780	49061780	G	A	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	silent	c.5751	p.F1917	0.988	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001				34	0	0	28	3	9.67742
KIAA2022	0	genome.wustl.edu	37	X	73961054	73961054	+	Missense_Mutation	SNP	T	T	C			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	73961054	73961054	T	C	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.3338	p.K1113R	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030				108	0	0	76	4	5
GPR143	0	genome.wustl.edu	37	X	9693829	9693829	+	Missense_Mutation	SNP	T	T	G			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	X	9693829	9693829	T	G	SNP	GPR143	ENST00000380929	human	ensembl	74_37	-1	known	missense	c.1232	p.K411T	0.000	pfam_Ocular_alb1	pfam_Ocular_alb1,pfam_GPCR_2_secretin-like,prints_Ocular_alb1	-	no_errors	GPR143	HGNC	ENSG00000101850				33	0	0	28	5	15.1515
ZNF518A	0	genome.wustl.edu	37	10	97918065	97918065	+	RNA	DEL	C	C	-			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	10	97918065	97918065	C	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.967	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				91	0	0	58	16	21.6216
BTNL8	0	genome.wustl.edu	37	5	180377441	180377441	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	180377441	180377441	A	-	DEL	BTNL8	ENST00000340184	human	ensembl	74_37	+1	known	frame_shift_del	c.1400	p.E467fs	0.001	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTNL8	HGNC	ENSG00000113303				89	0	0	93	11	10.5769
SREK1IP1	0	genome.wustl.edu	37	5	64023940	64023941	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	5	64023940	64023941	-	T	INS	SREK1IP1	ENST00000513458	human	ensembl	74_37	-1	known	frame_shift_ins	c.272_271	p.R91fs	0.998:1.000	NULL	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	SREK1IP1	HGNC	ENSG00000153006				11	0	0	4	2	33.3333
DSP	0	genome.wustl.edu	37	6	7542148	7542149	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	6	7542148	7542149	-	A	INS	DSP	ENST00000379802	human	ensembl	74_37	+1	known	frame_shift_ins	c.2_1	p.M0fs	0.955:0.997	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				22	0	0	17	2	10.5263
GARS	0	genome.wustl.edu	37	7	30634583	30634585	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-BR-8687-01A-11D-2394-08	TCGA-BR-8687-10A-01D-2394-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fd5f700f-a8cf-471b-a268-6ec604c3bed6	54a3ff23-3014-4dc2-8bf9-d5c6b3e63618	7	30634583	30634585	CTG	-	DEL	GARS	ENST00000389266	human	ensembl	74_37	+1	known	in_frame_del	c.46_48	p.L19in_frame_del	0.090:0.073:0.025	NULL	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,prints_tRNA-synt_gly,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_tRNA-synt_gly	-	no_errors	GARS	HGNC	ENSG00000106105				17	0	0	13	2	13.3333
