Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PRRC2C	0	genome.wustl.edu	37	1	171505357	171505357	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	1	171505357	171505357	T	C	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	missense	c.2233	p.Y745H	0.998	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523				66	0	0	45	3	6.25
BPNT1	0	genome.wustl.edu	37	1	220242771	220242771	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	1	220242771	220242771	C	T	SNP	BPNT1	ENST00000322067	human	ensembl	74_37	-1	known	missense	c.337	p.V113M	1.000	pfam_Inositol_monophosphatase	pfam_Inositol_monophosphatase	-	no_errors	BPNT1	HGNC	ENSG00000162813				116	0	0	96	28	22.5806
NEXN	0	genome.wustl.edu	37	1	78395101	78395101	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	1	78395101	78395101	G	C	SNP	NEXN	ENST00000334785	human	ensembl	74_37	+1	known	missense	c.965	p.R322T	1.000	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	NEXN	HGNC	ENSG00000162614				116	0	0	70	29	29.2929
COL24A1	0	genome.wustl.edu	37	1	86591541	86591541	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	1	86591541	86591541	C	T	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	missense	c.478	p.D160N	0.988	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502				98	0	0	92	6	6.12245
USP54	0	genome.wustl.edu	37	10	75258563	75258563	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	10	75258563	75258563	G	A	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	nonsense	c.4879	p.R1627*	0.958	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348				206	0	0	94	32	25.3968
PRR5L	0	genome.wustl.edu	37	11	36484155	36484155	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	11	36484155	36484155	C	A	SNP	PRR5L	ENST00000378867	human	ensembl	74_37	+1	known	missense	c.976	p.P326T	0.993	NULL	pfam_HbrB	-	no_errors	PRR5L	HGNC	ENSG00000135362				46	0	0	27	6	18.1818
ARFGAP2	0	genome.wustl.edu	37	11	47196833	47196833	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	11	47196833	47196833	G	C	SNP	ARFGAP2	ENST00000524782	human	ensembl	74_37	-1	known	missense	c.296	p.A99G	1.000	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ARFGAP2	HGNC	ENSG00000149182				214	0	0	174	45	20.5479
MS4A14	0	genome.wustl.edu	37	11	60183690	60183690	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	11	60183690	60183690	C	T	SNP	MS4A14	ENST00000300187	human	ensembl	74_37	+1	known	missense	c.1249	p.P417S	0.000	NULL	pfam_CD20-like	-	no_errors	MS4A14	HGNC	ENSG00000166928				115	0	0	55	22	28.5714
FIBP	0	genome.wustl.edu	37	11	65655421	65655421	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	11	65655421	65655421	C	T	SNP	FIBP	ENST00000338369	human	ensembl	74_37	-1	known	missense	c.268	p.A90T	1.000	pfam_FIBP	pfam_FIBP	-	no_errors	FIBP	HGNC	ENSG00000172500				40	0	0	17	5	22.7273
WNK1	0	genome.wustl.edu	37	12	1005298	1005298	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	12	1005298	1005298	C	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	missense	c.7139	p.S2380F	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237				150	0	0	167	20	10.6952
GSG1	0	genome.wustl.edu	37	12	13241798	13241798	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	12	13241798	13241798	C	T	SNP	GSG1	ENST00000324458	human	ensembl	74_37	-1	known	missense	c.479	p.R160K	1.000	NULL	pfam_GSG-1	-	no_errors	GSG1	HGNC	ENSG00000111305				104	0	0	58	17	22.6667
EP400	0	genome.wustl.edu	37	12	132464274	132464274	+	Silent	SNP	C	C	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	12	132464274	132464274	C	A	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	silent	c.1479	p.A493	0.103	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				44	0	0	41	3	6.81818
GALNT8	0	genome.wustl.edu	37	12	4853826	4853826	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	12	4853826	4853826	G	A	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	missense	c.820	p.V274I	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035				72	0	0	44	28	38.8889
DGKA	0	genome.wustl.edu	37	12	56334503	56334503	+	Silent	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	12	56334503	56334503	C	T	SNP	DGKA	ENST00000331886	human	ensembl	74_37	+1	known	silent	c.1014	p.V338	0.959	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKA	HGNC	ENSG00000065357				139	0	0	374	52	12.2066
DGKA	0	genome.wustl.edu	37	12	56335359	56335359	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	12	56335359	56335359	C	T	SNP	DGKA	ENST00000331886	human	ensembl	74_37	+1	known	missense	c.1241	p.P414L	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKA	HGNC	ENSG00000065357				224	0	0	800	68	7.8341
MYCBP2	0	genome.wustl.edu	37	13	77671839	77671839	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	13	77671839	77671839	C	T	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.9450	p.M3150I	1.000	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				264	0	0	205	47	18.6508
FANCM	0	genome.wustl.edu	37	14	45657009	45657009	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	14	45657009	45657009	G	A	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.4698	p.M1566I	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790				74	0	0	43	14	24.5614
ZFYVE26	0	genome.wustl.edu	37	14	68250043	68250043	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	14	68250043	68250043	G	A	SNP	ZFYVE26	ENST00000347230	human	ensembl	74_37	-1	known	missense	c.3826	p.P1276S	0.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE26	HGNC	ENSG00000072121				293	0	0	188	49	20.6751
MAPKBP1	0	genome.wustl.edu	37	15	42115796	42115796	+	Silent	SNP	C	C	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	15	42115796	42115796	C	A	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	silent	c.3768	p.A1256	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802				94	0	0	56	14	20
RHBDL3	0	genome.wustl.edu	37	17	30615917	30615917	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	17	30615917	30615917	G	A	SNP	RHBDL3	ENST00000269051	human	ensembl	74_37	+1	known	missense	c.401	p.R134Q	1.000	pirsf_Peptidase_S54_rhomboid_met	pfam_Peptidase_S54_rhomboid_dom,pirsf_Peptidase_S54_rhomboid_met,pfscan_EF_hand_dom	-	no_errors	RHBDL3	HGNC	ENSG00000141314				60	0	0	44	12	21.4286
C17orf85	0	genome.wustl.edu	37	17	3716433	3716433	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	17	3716433	3716433	G	A	SNP	C17orf85	ENST00000389005	human	ensembl	74_37	-1	known	nonsense	c.1768	p.Q590*	1.000	NULL	pfam_DUF2414	-	no_errors	C17orf85	HGNC	ENSG00000074356				248	0	0	183	42	18.6667
C17orf85	0	genome.wustl.edu	37	17	3716434	3716434	+	Silent	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	17	3716434	3716434	C	T	SNP	C17orf85	ENST00000389005	human	ensembl	74_37	-1	known	silent	c.1767	p.E589	1.000	NULL	pfam_DUF2414	-	no_errors	C17orf85	HGNC	ENSG00000074356				242	0	0	180	41	18.552
EFTUD2	0	genome.wustl.edu	37	17	42940215	42940215	+	Silent	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	17	42940215	42940215	G	A	SNP	EFTUD2	ENST00000426333	human	ensembl	74_37	-1	known	silent	c.1473	p.H491	0.919	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EFTUD2	HGNC	ENSG00000108883				104	0	0	73	30	29.1262
RALBP1	0	genome.wustl.edu	37	18	9535908	9535908	+	Silent	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	18	9535908	9535908	C	T	SNP	RALBP1	ENST00000019317	human	ensembl	74_37	+1	known	silent	c.1941	p.S647	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	RALBP1	HGNC	ENSG00000017797				38	0	0	26	2	7.14286
PPP4R1	0	genome.wustl.edu	37	18	9595144	9595144	+	Silent	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	18	9595144	9595144	C	T	SNP	PPP4R1	ENST00000400556	human	ensembl	74_37	-1	known	silent	c.60	p.V20	1.000	NULL	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R1	HGNC	ENSG00000154845				156	0	0	113	25	18.1159
SUPT5H	0	genome.wustl.edu	37	19	39960816	39960816	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	19	39960816	39960816	G	A	SNP	SUPT5H	ENST00000432763	human	ensembl	74_37	+1	known	missense	c.1432	p.V478M	1.000	pfam_KOW,superfamily_Translation_prot_SH3-like,smart_KOW,pirsf_TF_Spt5	pfam_TF_Spt5_NGN-domain,pfam_KOW,pfam_Spt5_N,superfamily_Translation_prot_SH3-like,smart_Transcrpt_antiterm_NusG_N_dom,smart_KOW,pirsf_TF_Spt5	-	no_errors	SUPT5H	HGNC	ENSG00000196235				359	0	0	206	57	21.673
CKM	0	genome.wustl.edu	37	19	45815134	45815134	+	Silent	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	19	45815134	45815134	G	A	SNP	CKM	ENST00000221476	human	ensembl	74_37	-1	known	silent	c.526	p.L176	0.999	pfam_ATP-guanido_PTrfase_cat	pfam_ATP-guanido_PTrfase_cat,pfam_ATP-guanido_PTrfase_N,superfamily_ATP-guanido_PTrfase_N	-	no_errors	CKM	HGNC	ENSG00000104879				58	0	0	34	10	22.7273
ENSG00000232220	0	genome.wustl.edu	37	19	54377880	54377880	+	RNA	SNP	C	C	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	19	54377880	54377880	C	G	SNP	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220				17	0	0	13	8	38.0952
KCNF1	0	genome.wustl.edu	37	2	11053370	11053370	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	2	11053370	11053370	C	T	SNP	KCNF1	ENST00000295082	human	ensembl	74_37	+1	known	missense	c.818	p.T273M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNF1	HGNC	ENSG00000162975				51	0	0	54	13	19.403
GPR39	0	genome.wustl.edu	37	2	133175294	133175294	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	2	133175294	133175294	G	A	SNP	GPR39	ENST00000329321	human	ensembl	74_37	+1	known	missense	c.679	p.A227T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR39	HGNC	ENSG00000183840				103	0	0	66	20	23.2558
GDF7	0	genome.wustl.edu	37	2	20871059	20871059	+	Silent	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	2	20871059	20871059	G	A	SNP	GDF7	ENST00000272224	human	ensembl	74_37	+1	known	silent	c.1227	p.A409	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF7	HGNC	ENSG00000143869				27	0	0	23	6	20.6897
TNS1	0	genome.wustl.edu	37	2	218683433	218683433	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	2	218683433	218683433	G	A	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.3310	p.R1104W	0.205	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				75	0	0	51	10	16.3934
TCF23	0	genome.wustl.edu	37	2	27373194	27373194	+	Silent	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	2	27373194	27373194	G	A	SNP	TCF23	ENST00000296096	human	ensembl	74_37	+1	known	silent	c.426	p.P142	0.370	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF23	HGNC	ENSG00000163792				340	1	0.293255	284	59	17.2012
EMILIN3	0	genome.wustl.edu	37	20	39991532	39991532	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	20	39991532	39991532	A	G	SNP	EMILIN3	ENST00000332312	human	ensembl	74_37	-1	known	missense	c.677	p.F226S	1.000	NULL	pfam_EMI_domain,pfscan_EMI_domain	-	no_errors	EMILIN3	HGNC	ENSG00000183798				100	0	0	52	14	21.2121
C3orf72	0	genome.wustl.edu	37	3	138669287	138669287	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	138669287	138669287	G	C	SNP	C3orf72	ENST00000383165	human	ensembl	74_37	+1	known	missense	c.401	p.G134A	0.001	NULL	NULL	-	no_errors	C3orf72	HGNC	ENSG00000206262				65	0	0	47	10	17.5439
GHSR	0	genome.wustl.edu	37	3	172165669	172165669	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	172165669	172165669	A	T	SNP	GHSR	ENST00000241256	human	ensembl	74_37	-1	known	missense	c.535	p.F179I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GHS-R,prints_GPCR_Rhodpsn	-	no_errors	GHSR	HGNC	ENSG00000121853				68	0	0	42	5	10.6383
TBCCD1	0	genome.wustl.edu	37	3	186272346	186272346	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	186272346	186272346	A	G	SNP	TBCCD1	ENST00000338733	human	ensembl	74_37	-1	known	missense	c.1241	p.V414A	0.968	pfam_Tubulin-bd_cofactor_C_dom	pfam_Tubulin-bd_cofactor_C_dom,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	TBCCD1	HGNC	ENSG00000113838				102	0	0	59	14	19.1781
RFC4	0	genome.wustl.edu	37	3	186509621	186509621	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	186509621	186509621	T	C	SNP	RFC4	ENST00000296273	human	ensembl	74_37	-1	known	missense	c.694	p.K232E	0.869	superfamily_P-loop_NTPase	pfam_Rep_factorC_C_dom,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC4	HGNC	ENSG00000163918				206	0	0	175	10	5.40541
KCNH8	0	genome.wustl.edu	37	3	19384207	19384207	+	Splice_Site	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	19384207	19384207	G	A	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	splice_site	c.570+1	e4+1	1.000	-	-	-	no_errors	KCNH8	HGNC	ENSG00000183960				161	0	0	96	26	21.3115
SNRK	0	genome.wustl.edu	37	3	43344605	43344605	+	RNA	SNP	T	T	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	43344605	43344605	T	G	SNP	SNRK	ENST00000462810	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNRK	HGNC	ENSG00000163788				26	0	0	15	7	31.8182
ASB5	0	genome.wustl.edu	37	4	177142387	177142387	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	4	177142387	177142387	C	A	SNP	ASB5	ENST00000296525	human	ensembl	74_37	-1	known	nonsense	c.589	p.E197*	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB5	HGNC	ENSG00000164122				106	0	0	91	9	9
C4orf50	0	genome.wustl.edu	37	4	5969171	5969171	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	4	5969171	5969171	C	T	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	missense	c.1849	p.V617I	0.004	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215				174	0	0	63	24	27.5862
F12	0	genome.wustl.edu	37	5	176832124	176832124	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	5	176832124	176832124	C	T	SNP	F12	ENST00000253496	human	ensembl	74_37	-1	known	missense	c.460	p.E154K	0.000	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Fibronectin_type1,smart_Fibronectin_type1,pfscan_Fibronectin_type1	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_EG-like_dom,pfam_Fibronectin_type1,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	F12	HGNC	ENSG00000131187				156	1	0.636943	80	22	21.5686
KIAA0947	0	genome.wustl.edu	37	5	5463022	5463022	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	5	5463022	5463022	C	T	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.3575	p.S1192F	0.974	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				25	0	0	16	3	15.7895
ENC1	0	genome.wustl.edu	37	5	73931260	73931260	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	5	73931260	73931260	C	G	SNP	ENC1	ENST00000302351	human	ensembl	74_37	-1	known	missense	c.1051	p.E351Q	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	ENC1	HGNC	ENSG00000171617				185	0	0	119	12	9.16031
SMOC2	0	genome.wustl.edu	37	6	168910683	168910683	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	6	168910683	168910683	G	T	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	missense	c.173	p.R58M	0.999	pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562				159	0	0	128	37	22.4242
HIST1H1E	0	genome.wustl.edu	37	6	26156976	26156976	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	6	26156976	26156976	G	A	SNP	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	missense	c.358	p.A120T	0.112	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298				46	0	0	17	9	34.6154
ZFP57	0	genome.wustl.edu	37	6	29643828	29643828	+	Silent	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	6	29643828	29643828	G	A	SNP	ZFP57	ENST00000488757	human	ensembl	74_37	-1	known	silent	c.132	p.V44	0.342	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644				383	0	0	189	69	26.7442
RING1	0	genome.wustl.edu	37	6	33177736	33177736	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	6	33177736	33177736	G	A	SNP	RING1	ENST00000374656	human	ensembl	74_37	+1	known	missense	c.284	p.R95Q	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RING1	HGNC	ENSG00000204227				62	0	0	36	11	23.4043
CREB5	0	genome.wustl.edu	37	7	28844124	28844124	+	Silent	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	7	28844124	28844124	C	T	SNP	CREB5	ENST00000357727	human	ensembl	74_37	+1	known	silent	c.1011	p.T337	1.000	pirsf_TF_cAMP-dep	pfam_bZIP,smart_bZIP,pirsf_TF_cAMP-dep,pfscan_Znf_C2H2,pfscan_bZIP	-	no_errors	CREB5	HGNC	ENSG00000146592				300	0	0	221	39	15
RNF216	0	genome.wustl.edu	37	7	5781105	5781105	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	7	5781105	5781105	C	A	SNP	RNF216	ENST00000389902	human	ensembl	74_37	-1	known	missense	c.543	p.L181F	0.147	NULL	smart_Znf_C6HC	-	no_errors	RNF216	HGNC	ENSG00000011275				633	1	0.157729	449	103	18.6594
ESCO2	0	genome.wustl.edu	37	8	27660907	27660907	+	Silent	SNP	C	C	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	8	27660907	27660907	C	G	SNP	ESCO2	ENST00000305188	human	ensembl	74_37	+1	known	silent	c.1758	p.T586	0.998	NULL	NULL	-	no_errors	ESCO2	HGNC	ENSG00000171320				251	0	0	195	40	17.0213
SNORD13	0	genome.wustl.edu	37	8	33371030	33371030	+	RNA	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	8	33371030	33371030	C	T	SNP	SNORD13	ENST00000459299	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.901	-	-	-	no_errors	SNORD13	HGNC	ENSG00000239039				267	0	0	174	49	21.9731
SULF1	0	genome.wustl.edu	37	8	70536309	70536309	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	8	70536309	70536309	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.1727	p.R576H	1.000	pfam_Extracellular_sulfatase_C,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				102	0	0	80	21	20.7921
PTGDS	0	genome.wustl.edu	37	9	139873804	139873804	+	Silent	SNP	C	C	T			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	9	139873804	139873804	C	T	SNP	PTGDS	ENST00000224167	human	ensembl	74_37	+1	known	silent	c.384	p.A128	0.004	superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_PstgldnD_synth	-	no_errors	PTGDS	HGNC	ENSG00000107317				29	0	0	25	6	19.3548
FREM1	0	genome.wustl.edu	37	9	14748594	14748594	+	Silent	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	9	14748594	14748594	G	A	SNP	FREM1	ENST00000380881	human	ensembl	74_37	-1	known	silent	c.5604	p.S1868	0.000	NULL	pfam_C-type_lectin,pfam_Calx_beta,superfamily_C-type_lectin_fold,superfamily_Cadherin-like,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	FREM1	HGNC	ENSG00000164946				443	0	0	330	76	18.7192
C9orf131	0	genome.wustl.edu	37	9	35045805	35045805	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	9	35045805	35045805	A	G	SNP	C9orf131	ENST00000312292	human	ensembl	74_37	+1	known	missense	c.3179	p.Q1060R	0.423	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038				327	1	0.304878	194	56	22.4
DAPK1	0	genome.wustl.edu	37	9	90321137	90321137	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	9	90321137	90321137	G	A	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.3226	p.V1076M	0.983	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730				60	0	0	25	10	28.5714
LRRC8B	0	genome.wustl.edu	37	1	90058582	90058582	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	1	90058582	90058582	A	-	DEL	LRRC8B	ENST00000330947	human	ensembl	74_37	+1	known	frame_shift_del	c.2392	p.T798fs	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8B	HGNC	ENSG00000197147				261	0	0	172	45	20.7373
TJP1	0	genome.wustl.edu	37	15	30065540	30065545	+	In_Frame_Del	DEL	TCCAAA	TCCAAA	-			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	TCCAAA	TCCAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	15	30065540	30065545	TCCAAA	-	DEL	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	in_frame_del	c.105_100	p.FG34in_frame_del	0.996:1.000:1.000:1.000:1.000:1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067				262	0	0	186	23	11.0048
ABCA9	0	genome.wustl.edu	37	17	67004307	67004317	+	Frame_Shift_Del	DEL	CCAGTGCTTGG	CCAGTGCTTGG	-			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	CCAGTGCTTGG	CCAGTGCTTGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	17	67004307	67004317	CCAGTGCTTGG	-	DEL	ABCA9	ENST00000340001	human	ensembl	74_37	-1	known	frame_shift_del	c.3217_3207	p.Q1070fs	1.000:0.982:0.928:0.629:0.014:0.976:0.999:0.999:1.000:1.000:0.974	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258				262	0	0	226	22	8.87097
LTBP4	0	genome.wustl.edu	37	19	41122902	41122902	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	19	41122902	41122902	C	-	DEL	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	frame_shift_del	c.3121	p.T1042fs	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006				74	0	0	62	10	13.8889
ZC3H15	0	genome.wustl.edu	37	2	187368932	187368933	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	2	187368932	187368933	-	GA	INS	ZC3H15	ENST00000337859	human	ensembl	74_37	+1	known	frame_shift_ins	c.708_709	p.R239fs	1.000:1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H15	HGNC	ENSG00000065548				105	0	0	114	17	12.9771
SREBF2	0	genome.wustl.edu	37	22	42262865	42262866	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	22	42262865	42262866	GA	-	DEL	SREBF2	ENST00000361204	human	ensembl	74_37	+1	known	frame_shift_del	c.119_120	p.E41fs	1.000:0.996	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF2	HGNC	ENSG00000198911				367	0	0	248	54	17.8808
TBCCD1	0	genome.wustl.edu	37	3	186272188	186272190	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CD-5802-01A-11D-1600-08	TCGA-CD-5802-10A-01D-1600-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c1b44966-0f72-4c4f-8783-ab3ffe7f17b2	af722e36-4912-45c4-b431-a2ceff596bac	3	186272188	186272190	AGA	-	DEL	TBCCD1	ENST00000338733	human	ensembl	74_37	-1	known	in_frame_del	c.1399_1397	p.F466in_frame_del	1.000:1.000:1.000	NULL	pfam_Tubulin-bd_cofactor_C_dom,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	TBCCD1	HGNC	ENSG00000113838				225	0	0	224	43	16.1049
