Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
LRIF1	0	genome.wustl.edu	37	1	111494912	111494912	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	111494912	111494912	C	T	SNP	LRIF1	ENST00000369763	human	ensembl	74_37	-1	known	silent	c.594	p.A198	0.939	NULL	NULL	-	no_errors	LRIF1	HGNC	ENSG00000121931				24	0	0	45	14	23.7288
FLG	0	genome.wustl.edu	37	1	152282997	152282997	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	152282997	152282997	G	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.4365	p.H1455	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				155	0	0	423	100	19.1205
OR6Y1	0	genome.wustl.edu	37	1	158517539	158517539	+	Silent	SNP	A	A	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	158517539	158517539	A	T	SNP	OR6Y1	ENST00000302617	human	ensembl	74_37	-1	known	silent	c.357	p.L119	0.014	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6Y1	HGNC	ENSG00000197532				39	0	0	193	12	5.85366
TNR	0	genome.wustl.edu	37	1	175293536	175293536	+	Silent	SNP	G	G	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	175293536	175293536	G	T	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	silent	c.3913	p.R1305	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				28	0	0	65	14	17.7215
DIEXF	0	genome.wustl.edu	37	1	210004191	210004191	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	210004191	210004191	G	C	SNP	DIEXF	ENST00000491415	human	ensembl	74_37	+1	known	missense	c.191	p.S64T	1.000	NULL	pfam_Digest_organ_expansion_fac-prd,superfamily_P-loop_NTPase	-	no_errors	DIEXF	HGNC	ENSG00000117597				40	0	0	138	27	16.3636
H3F3A	0	genome.wustl.edu	37	1	226252104	226252104	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	226252104	226252104	A	G	SNP	H3F3A	ENST00000366813	human	ensembl	74_37	+1	known	missense	c.52	p.R18G	0.996	superfamily_Histone-fold,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	H3F3A	HGNC	ENSG00000163041				28	0	0	58	44	43.1373
RAB4A	0	genome.wustl.edu	37	1	229438703	229438703	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	229438703	229438703	C	T	SNP	RAB4A	ENST00000366690	human	ensembl	74_37	+1	known	silent	c.636	p.N212	0.286	smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB4A	HGNC	ENSG00000168118				88	0	0	205	55	21.1538
SIPA1L2	0	genome.wustl.edu	37	1	232650081	232650081	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	232650081	232650081	C	G	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.1005	p.Q335H	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				55	0	0	103	72	41.1429
RYR2	0	genome.wustl.edu	37	1	237711767	237711767	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	237711767	237711767	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.2937	p.M979I	1.000	pfam_Ryanodine_rcpt	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				14	0	0	56	9	13.8462
MATN1	0	genome.wustl.edu	37	1	31188993	31188993	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	31188993	31188993	G	A	SNP	MATN1	ENST00000373765	human	ensembl	74_37	-1	known	missense	c.970	p.R324C	0.999	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Matrilin_coiled-coil_trimer,pfam_EGF-like_Ca-bd_dom,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_VWF_A	-	no_errors	MATN1	HGNC	ENSG00000162510				67	0	0	61	43	41.3462
CSMD2	0	genome.wustl.edu	37	1	34180219	34180219	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	34180219	34180219	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.3374	p.R1125H	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				223	0	0	232	125	35.014
C1orf168	0	genome.wustl.edu	37	1	57257869	57257869	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	57257869	57257869	A	G	SNP	C1orf168	ENST00000343433	human	ensembl	74_37	-1	known	missense	c.617	p.L206S	0.000	NULL	superfamily_SH3_domain	-	no_errors	C1orf168	HGNC	ENSG00000187889				83	0	0	128	52	28.8889
C1orf141	0	genome.wustl.edu	37	1	67591508	67591508	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	67591508	67591508	G	A	SNP	C1orf141	ENST00000371006	human	ensembl	74_37	-1	known	missense	c.160	p.L54F	0.000	NULL	NULL	-	no_errors	C1orf141	HGNC	ENSG00000203963				45	0	0	104	38	26.7606
DIRAS3	0	genome.wustl.edu	37	1	68512429	68512429	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	68512429	68512429	G	A	SNP	DIRAS3	ENST00000370981	human	ensembl	74_37	-1	known	silent	c.552	p.T184	0.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS3	HGNC	ENSG00000162595				75	0	0	120	34	22.0779
PDZD7	0	genome.wustl.edu	37	10	102778901	102778901	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	10	102778901	102778901	G	A	SNP	PDZD7	ENST00000370215	human	ensembl	74_37	-1	known	silent	c.1002	p.S334	0.664	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD7	HGNC	ENSG00000186862				8	0	0	6	4	40
BEND7	0	genome.wustl.edu	37	10	13523095	13523095	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	10	13523095	13523095	G	A	SNP	BEND7	ENST00000396900	human	ensembl	74_37	-1	known	silent	c.867	p.D289	0.999	NULL	pfam_BEN_domain	-	no_errors	BEND7	HGNC	ENSG00000165626				34	0	0	66	26	28.2609
CUBN	0	genome.wustl.edu	37	10	17153024	17153024	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	10	17153024	17153024	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	silent	c.909	p.C303	0.329	superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				43	0	0	58	24	29.2683
HSD17B7P2	0	genome.wustl.edu	37	10	38654432	38654432	+	RNA	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	10	38654432	38654432	A	G	SNP	HSD17B7P2	ENST00000494540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSD17B7P2	HGNC	ENSG00000099251				23	0	0	67	4	5.6338
TRPC6	0	genome.wustl.edu	37	11	101375501	101375501	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	11	101375501	101375501	G	A	SNP	TRPC6	ENST00000344327	human	ensembl	74_37	-1	known	missense	c.199	p.R67W	1.000	NULL	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC6_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC6	HGNC	ENSG00000137672				59	0	0	132	46	25.8427
PSMC3	0	genome.wustl.edu	37	11	47445614	47445614	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	11	47445614	47445614	C	T	SNP	PSMC3	ENST00000298852	human	ensembl	74_37	-1	known	missense	c.574	p.D192N	1.000	superfamily_P-loop_NTPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC3	HGNC	ENSG00000165916				198	0	0	274	103	27.321
MYRF	0	genome.wustl.edu	37	11	61548671	61548671	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	11	61548671	61548671	C	T	SNP	MYRF	ENST00000278836	human	ensembl	74_37	+1	known	silent	c.2634	p.S878	0.997	NULL	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	MYRF	HGNC	ENSG00000124920				123	0	0	142	48	25.2632
NPAS4	0	genome.wustl.edu	37	11	66191453	66191453	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	11	66191453	66191453	C	T	SNP	NPAS4	ENST00000311034	human	ensembl	74_37	+1	known	silent	c.1092	p.T364	0.138	NULL	pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	NPAS4	HGNC	ENSG00000174576				175	0	0	296	81	21.4854
AMOTL1	0	genome.wustl.edu	37	11	94602562	94602562	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	11	94602562	94602562	C	T	SNP	AMOTL1	ENST00000433060	human	ensembl	74_37	+1	known	silent	c.2688	p.R896	0.014	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL1	HGNC	ENSG00000166025				11	0	0	24	9	27.2727
ANO4	0	genome.wustl.edu	37	12	101442178	101442178	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	101442178	101442178	G	C	SNP	ANO4	ENST00000392977	human	ensembl	74_37	+1	known	missense	c.1311	p.W437C	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO4	HGNC	ENSG00000151572				27	0	0	75	16	17.5824
TMEM132B	0	genome.wustl.edu	37	12	126135433	126135433	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	126135433	126135433	G	A	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	silent	c.1833	p.P611	0.001	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364				37	0	0	41	13	24.0741
ST8SIA1	0	genome.wustl.edu	37	12	22487055	22487055	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	22487055	22487055	C	T	SNP	ST8SIA1	ENST00000396037	human	ensembl	74_37	-1	known	missense	c.112	p.V38M	0.999	pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA1	HGNC	ENSG00000111728				118	0	0	210	78	27.0833
KRT6C	0	genome.wustl.edu	37	12	52864970	52864970	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	52864970	52864970	G	A	SNP	KRT6C	ENST00000252250	human	ensembl	74_37	-1	known	silent	c.1023	p.Y341	0.985	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6C	HGNC	ENSG00000170465				127	0	0	386	85	18.0467
KRT18	0	genome.wustl.edu	37	12	53345379	53345379	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	53345379	53345379	G	A	SNP	KRT18	ENST00000388835	human	ensembl	74_37	+1	known	missense	c.772	p.E258K	0.971	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT18	HGNC	ENSG00000111057				43	0	0	65	24	26.9663
MARS	0	genome.wustl.edu	37	12	57906632	57906632	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	57906632	57906632	C	T	SNP	MARS	ENST00000262027	human	ensembl	74_37	+1	known	missense	c.1852	p.R618C	1.000	pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Met-tRNA_synth	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_WHEP-TRS,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_S15_NS1_RNA-bd,superfamily_Thioredoxin-like_fold,pfscan_WHEP-TRS,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS	HGNC	ENSG00000166986				144	0	0	176	161	47.7745
PZP	0	genome.wustl.edu	37	12	9345130	9345130	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	9345130	9345130	G	A	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.1460	p.S487L	0.000	pfam_A2M_N_2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838				52	0	0	169	34	16.7488
GPC6	0	genome.wustl.edu	37	13	95034748	95034748	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	13	95034748	95034748	C	T	SNP	GPC6	ENST00000377047	human	ensembl	74_37	+1	known	silent	c.1233	p.S411	0.990	pfam_Glypican	pfam_Glypican	-	no_errors	GPC6	HGNC	ENSG00000183098				70	0	0	511	49	8.75
EIF5	0	genome.wustl.edu	37	14	103806119	103806119	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	14	103806119	103806119	C	T	SNP	EIF5	ENST00000216554	human	ensembl	74_37	+1	known	silent	c.1050	p.V350	1.000	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	pfam_Transl_init_fac_IF2/IF5,pfam_W2_domain,superfamily_ARM-type_fold,superfamily_Transl_init_fac_IF2/IF5_N,superfamily_Transl_init_fac_IF2/IF5_Zn-bd,smart_Transl_init_fac_IF2/IF5,smart_W2_domain	-	no_errors	EIF5	HGNC	ENSG00000100664				24	0	0	69	5	6.75676
AP1G2	0	genome.wustl.edu	37	14	24033856	24033856	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	14	24033856	24033856	G	A	SNP	AP1G2	ENST00000308724	human	ensembl	74_37	-1	known	missense	c.836	p.T279M	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP1_complex_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP1_complex_gsu,pfscan_Clathrin_g-adaptin_app	-	no_errors	AP1G2	HGNC	ENSG00000213983				57	0	0	57	12	17.3913
LRFN5	0	genome.wustl.edu	37	14	42356678	42356678	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	14	42356678	42356678	T	A	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.850	p.C284S	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379				49	0	0	124	33	21.0191
KCNH5	0	genome.wustl.edu	37	14	63483640	63483640	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	14	63483640	63483640	C	T	SNP	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	missense	c.106	p.V36M	1.000	superfamily_PAS	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015				29	0	0	82	28	25.4545
TMEM63C	0	genome.wustl.edu	37	14	77709373	77709373	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	14	77709373	77709373	G	A	SNP	TMEM63C	ENST00000298351	human	ensembl	74_37	+1	known	missense	c.1315	p.V439I	1.000	pfam_DUF221	pfam_DUF221	-	no_errors	TMEM63C	HGNC	ENSG00000165548				34	0	0	19	23	54.7619
ATP10A	0	genome.wustl.edu	37	15	26026198	26026198	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	26026198	26026198	G	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.622	p.R208W	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				74	0	0	99	38	27.7372
CASC5	0	genome.wustl.edu	37	15	40949646	40949646	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	40949646	40949646	A	G	SNP	CASC5	ENST00000346991	human	ensembl	74_37	+1	known	missense	c.6766	p.M2256V	1.000	NULL	NULL	-	no_errors	CASC5	HGNC	ENSG00000137812				28	0	0	101	30	22.9008
DUOX2	0	genome.wustl.edu	37	15	45387645	45387645	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	45387645	45387645	A	G	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.4229	p.L1410P	0.987	pfam_Fe_red_NAD-bd_6	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				76	0	0	155	62	28.5714
IGDCC4	0	genome.wustl.edu	37	15	65688196	65688196	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	65688196	65688196	C	T	SNP	IGDCC4	ENST00000352385	human	ensembl	74_37	-1	novel	missense	c.1303	p.V435I	0.444	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC4	HGNC	ENSG00000103742				13	0	0	18	9	33.3333
LCTL	0	genome.wustl.edu	37	15	66857601	66857601	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	66857601	66857601	C	T	SNP	LCTL	ENST00000341509	human	ensembl	74_37	-1	known	missense	c.103	p.G35R	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCTL	HGNC	ENSG00000188501				23	0	0	69	14	16.8675
PAQR5	0	genome.wustl.edu	37	15	69677202	69677202	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	69677202	69677202	C	T	SNP	PAQR5	ENST00000340965	human	ensembl	74_37	+1	known	silent	c.366	p.A122	0.847	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR5	HGNC	ENSG00000137819				41	0	0	47	15	24.1935
KIAA1024	0	genome.wustl.edu	37	15	79749511	79749511	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	15	79749511	79749511	G	A	SNP	KIAA1024	ENST00000305428	human	ensembl	74_37	+1	known	missense	c.1022	p.G341E	1.000	NULL	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330				71	0	0	211	56	20.9738
ITGAL	0	genome.wustl.edu	37	16	30505536	30505536	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	16	30505536	30505536	A	G	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.1217	p.Y406C	1.000	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844				104	0	0	171	45	20.8333
PDPR	0	genome.wustl.edu	37	16	70176523	70176523	+	Silent	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	16	70176523	70176523	A	G	SNP	PDPR	ENST00000288050	human	ensembl	74_37	+1	known	silent	c.1539	p.E513	1.000	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom	-	no_errors	PDPR	HGNC	ENSG00000090857				56	0	0	181	33	15.4206
HYDIN	0	genome.wustl.edu	37	16	71127826	71127826	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	16	71127826	71127826	C	T	SNP	HYDIN	ENST00000448089	human	ensembl	74_37	-1	known	missense	c.1340	p.R447H	1.000	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				28	0	0	84	29	25.6637
MYH3	0	genome.wustl.edu	37	17	10535852	10535852	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	17	10535852	10535852	C	T	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	missense	c.4897	p.A1633T	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063				181	0	0	199	89	30.9028
RAB5C	0	genome.wustl.edu	37	17	40278857	40278857	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	17	40278857	40278857	C	T	SNP	RAB5C	ENST00000346213	human	ensembl	74_37	-1	known	missense	c.451	p.A151T	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB5C	HGNC	ENSG00000108774				88	0	0	68	46	40.3509
WNK4	0	genome.wustl.edu	37	17	40948262	40948262	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	17	40948262	40948262	C	T	SNP	WNK4	ENST00000246914	human	ensembl	74_37	+1	known	missense	c.3553	p.R1185C	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK4	HGNC	ENSG00000126562				31	0	0	26	18	40.9091
RND2	0	genome.wustl.edu	37	17	41179268	41179268	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	17	41179268	41179268	G	A	SNP	RND2	ENST00000544533	human	ensembl	74_37	+1	known	missense	c.259	p.D87N	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RND2	HGNC	ENSG00000108830				148	0	0	207	68	24.7273
TP53	0	genome.wustl.edu	37	17	7578235	7578235	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	17	7578235	7578235	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.614	p.Y205C	0.989	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				45	0	0	17	53	75.7143
CSNK1D	0	genome.wustl.edu	37	17	80231183	80231183	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	17	80231183	80231183	G	A	SNP	CSNK1D	ENST00000314028	human	ensembl	74_37	-1	known	silent	c.75	p.L25	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1D	HGNC	ENSG00000141551				28	0	0	6	23	79.3103
SERPINB13	0	genome.wustl.edu	37	18	61260156	61260156	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	18	61260156	61260156	C	T	SNP	SERPINB13	ENST00000344731	human	ensembl	74_37	+1	known	silent	c.423	p.A141	0.639	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB13	HGNC	ENSG00000197641				45	0	0	111	38	25.5034
SLC1A6	0	genome.wustl.edu	37	19	15072947	15072947	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	15072947	15072947	C	T	SNP	SLC1A6	ENST00000221742	human	ensembl	74_37	-1	known	missense	c.802	p.A268T	1.000	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A6	HGNC	ENSG00000105143				87	0	0	134	48	26.3736
CPAMD8	0	genome.wustl.edu	37	19	17038952	17038952	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	17038952	17038952	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	silent	c.3378	p.T1126	0.968	pfam_Methyltransf_FA	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				57	0	0	91	35	27.7778
HNRNPUL1	0	genome.wustl.edu	37	19	41808848	41808848	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	41808848	41808848	C	T	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	nonsense	c.1966	p.R656*	1.000	NULL	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323				58	0	0	75	5	6.25
EML2	0	genome.wustl.edu	37	19	46119147	46119147	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	46119147	46119147	C	A	SNP	EML2	ENST00000587152	human	ensembl	74_37	-1	known	missense	c.2113	p.G705C	1.000	pfam_WD40_repeat,superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML2	HGNC	ENSG00000125746				26	0	0	46	7	13.2075
TMEM143	0	genome.wustl.edu	37	19	48863423	48863423	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	48863423	48863423	G	A	SNP	TMEM143	ENST00000293261	human	ensembl	74_37	-1	known	missense	c.275	p.S92L	0.996	NULL	pfam_DUF3754	-	no_errors	TMEM143	HGNC	ENSG00000161558				36	0	0	50	39	43.8202
ZNF880	0	genome.wustl.edu	37	19	52887688	52887688	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	52887688	52887688	T	A	SNP	ZNF880	ENST00000422689	human	ensembl	74_37	+1	known	missense	c.855	p.N285K	0.003	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF880	HGNC	ENSG00000221923				30	0	0	42	75	64.1026
ZNF845	0	genome.wustl.edu	37	19	53856730	53856730	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	53856730	53856730	G	A	SNP	ZNF845	ENST00000458035	human	ensembl	74_37	+1	known	silent	c.2802	p.K934	0.672	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF845	HGNC	ENSG00000213799				10	0	0	82	7	7.86517
ZNF845	0	genome.wustl.edu	37	19	53856761	53856761	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	19	53856761	53856761	T	C	SNP	ZNF845	ENST00000458035	human	ensembl	74_37	+1	known	missense	c.2833	p.C945R	0.612	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF845	HGNC	ENSG00000213799				9	0	0	71	7	8.97436
LRP1B	0	genome.wustl.edu	37	2	141607716	141607716	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	141607716	141607716	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	nonsense	c.4894	p.R1632*	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				27	0	0	117	36	23.5294
NEB	0	genome.wustl.edu	37	2	152348933	152348933	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	152348933	152348933	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.24841	p.R8281W	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				34	0	0	88	27	23.4783
ITGB6	0	genome.wustl.edu	37	2	160994710	160994710	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	160994710	160994710	C	A	SNP	ITGB6	ENST00000283249	human	ensembl	74_37	-1	known	nonsense	c.1108	p.E370*	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB6	HGNC	ENSG00000115221				49	0	0	108	51	32.0755
TLK1	0	genome.wustl.edu	37	2	171902756	171902756	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	171902756	171902756	G	A	SNP	TLK1	ENST00000431350	human	ensembl	74_37	-1	known	missense	c.1097	p.P366L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TLK1	HGNC	ENSG00000198586				44	0	0	181	61	25.2066
TTN	0	genome.wustl.edu	37	2	179428276	179428276	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	179428276	179428276	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.74879	p.R24960Q	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				53	0	0	140	48	25.5319
ZNF385B	0	genome.wustl.edu	37	2	180348116	180348116	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	180348116	180348116	C	T	SNP	ZNF385B	ENST00000410066	human	ensembl	74_37	-1	known	missense	c.553	p.V185I	1.000	smart_Znf_U1	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385B	HGNC	ENSG00000144331				26	0	0	78	12	13.3333
NCKAP1	0	genome.wustl.edu	37	2	183860435	183860435	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	183860435	183860435	G	A	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	silent	c.753	p.S251	0.990	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1	-	no_errors	NCKAP1	HGNC	ENSG00000061676				30	0	0	83	30	26.5487
USP37	0	genome.wustl.edu	37	2	219324515	219324515	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	219324515	219324515	C	A	SNP	USP37	ENST00000258399	human	ensembl	74_37	-1	known	nonsense	c.2641	p.E881*	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19/C67	-	no_errors	USP37	HGNC	ENSG00000135913				57	0	0	122	85	41.0628
DES	0	genome.wustl.edu	37	2	220290450	220290450	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	220290450	220290450	G	A	SNP	DES	ENST00000373960	human	ensembl	74_37	+1	known	missense	c.1354	p.E452K	1.000	NULL	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin	-	no_errors	DES	HGNC	ENSG00000175084				10	0	0	21	3	12.5
CXXC11	0	genome.wustl.edu	37	2	242814202	242814202	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	242814202	242814202	C	T	SNP	CXXC11	ENST00000343216	human	ensembl	74_37	+1	known	silent	c.495	p.N165	0.000	NULL	NULL	-	no_errors	CXXC11	HGNC	ENSG00000188011				17	0	0	4	3	42.8571
ABCG5	0	genome.wustl.edu	37	2	44065004	44065004	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	44065004	44065004	G	A	SNP	ABCG5	ENST00000260645	human	ensembl	74_37	-1	known	silent	c.234	p.S78	0.937	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG5	HGNC	ENSG00000138075				78	0	0	177	33	15.7143
MPHOSPH10	0	genome.wustl.edu	37	2	71360098	71360098	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	71360098	71360098	G	A	SNP	MPHOSPH10	ENST00000244230	human	ensembl	74_37	+1	known	missense	c.160	p.E54K	0.994	pfam_Mpp10,pirsf_snoRNP_Mpp10	pfam_Mpp10,pirsf_snoRNP_Mpp10	-	no_errors	MPHOSPH10	HGNC	ENSG00000124383				23	0	0	71	30	29.703
ASAP2	0	genome.wustl.edu	37	2	9475294	9475294	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	2	9475294	9475294	G	A	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.835	p.V279I	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693				34	0	0	93	46	33.0935
SIRPD	0	genome.wustl.edu	37	20	1532406	1532406	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	1532406	1532406	C	T	SNP	SIRPD	ENST00000381623	human	ensembl	74_37	-1	known	missense	c.352	p.V118M	0.887	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	SIRPD	HGNC	ENSG00000125900				33	0	0	218	36	14.1732
TGM3	0	genome.wustl.edu	37	20	2298062	2298062	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	2298062	2298062	G	A	SNP	TGM3	ENST00000381458	human	ensembl	74_37	+1	known	missense	c.914	p.R305Q	0.201	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM3	HGNC	ENSG00000125780				103	0	0	393	55	12.2768
NINL	0	genome.wustl.edu	37	20	25456683	25456683	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	25456683	25456683	C	T	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	missense	c.3244	p.D1082N	0.006	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				58	0	0	195	31	13.7168
FRG1B	0	genome.wustl.edu	37	20	29628236	29628236	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	29628236	29628236	G	C	SNP	FRG1B	ENST00000278882	human	ensembl	74_37	+1	known	missense	c.238	p.A80P	1.000	pfam_FRG1,superfamily_Actin_cross-linking	pfam_FRG1,superfamily_Actin_cross-linking	-	no_errors	FRG1B	HGNC	ENSG00000149531				33	0	0	323	20	5.8309
MYBL2	0	genome.wustl.edu	37	20	42343870	42343870	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	42343870	42343870	G	A	SNP	MYBL2	ENST00000217026	human	ensembl	74_37	+1	known	missense	c.1921	p.E641K	0.907	NULL	pfam_C-myb_C,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL2	HGNC	ENSG00000101057				246	0	0	843	132	13.5385
ZNF831	0	genome.wustl.edu	37	20	57767405	57767405	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	57767405	57767405	C	T	SNP	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	missense	c.1331	p.T444M	0.996	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203				45	0	0	90	14	13.4615
HSPA13	0	genome.wustl.edu	37	21	15746181	15746181	+	Silent	SNP	T	T	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	21	15746181	15746181	T	C	SNP	HSPA13	ENST00000285667	human	ensembl	74_37	-1	known	silent	c.1173	p.E391	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA13	HGNC	ENSG00000155304				45	0	0	194	49	20.1646
C22orf29	0	genome.wustl.edu	37	22	19839351	19839351	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	22	19839351	19839351	C	T	SNP	C22orf29	ENST00000328554	human	ensembl	74_37	-1	known	missense	c.434	p.R145H	0.000	NULL	NULL	-	no_errors	C22orf29	HGNC	ENSG00000215012				114	0	0	106	46	30.2632
GOLGA4	0	genome.wustl.edu	37	3	37379168	37379168	+	Silent	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	3	37379168	37379168	A	G	SNP	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	silent	c.6339	p.A2113	0.990	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674				14	0	0	35	11	23.913
ULK4	0	genome.wustl.edu	37	3	41860979	41860979	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	3	41860979	41860979	G	C	SNP	ULK4	ENST00000301831	human	ensembl	74_37	-1	known	missense	c.1784	p.P595R	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ULK4	HGNC	ENSG00000168038				27	0	0	45	31	40.7895
ROBO1	0	genome.wustl.edu	37	3	78766527	78766527	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	3	78766527	78766527	G	T	SNP	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	missense	c.815	p.A272E	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855				47	0	0	150	9	5.66038
TTC29	0	genome.wustl.edu	37	4	147824735	147824735	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	4	147824735	147824735	C	T	SNP	TTC29	ENST00000398886	human	ensembl	74_37	-1	known	missense	c.625	p.E209K	0.995	smart_TPR_repeat	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC29	HGNC	ENSG00000137473				13	0	0	28	6	17.6471
TRIML2	0	genome.wustl.edu	37	4	189012857	189012857	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	4	189012857	189012857	C	T	SNP	TRIML2	ENST00000512729	human	ensembl	74_37	-1	known	silent	c.834	p.K278	0.002	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIML2	HGNC	ENSG00000179046				189	0	0	165	70	29.7872
GABRG1	0	genome.wustl.edu	37	4	46066506	46066506	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	4	46066506	46066506	G	A	SNP	GABRG1	ENST00000295452	human	ensembl	74_37	-1	known	missense	c.577	p.H193Y	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg1_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG1	HGNC	ENSG00000163285				32	0	0	105	36	25.5319
PPBP	0	genome.wustl.edu	37	4	74853296	74853296	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	4	74853296	74853296	G	A	SNP	PPBP	ENST00000296028	human	ensembl	74_37	-1	known	silent	c.222	p.P74	0.001	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	PPBP	HGNC	ENSG00000163736				33	0	0	67	39	36.7925
GAK	0	genome.wustl.edu	37	4	860839	860839	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	4	860839	860839	G	A	SNP	GAK	ENST00000314167	human	ensembl	74_37	-1	known	missense	c.2777	p.P926L	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_Kinase-like_dom,superfamily_DnaJ_domain,superfamily_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_DnaJ_domain,pfscan_Prot_kinase_dom,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	GAK	HGNC	ENSG00000178950				77	0	0	32	24	42.8571
DMP1	0	genome.wustl.edu	37	4	88583812	88583812	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	4	88583812	88583812	C	A	SNP	DMP1	ENST00000339673	human	ensembl	74_37	+1	known	missense	c.882	p.D294E	1.000	pfam_DMP1	pfam_DMP1	-	no_errors	DMP1	HGNC	ENSG00000152592				23	0	0	43	18	29.5082
YTHDC2	0	genome.wustl.edu	37	5	112868582	112868582	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	112868582	112868582	C	T	SNP	YTHDC2	ENST00000161863	human	ensembl	74_37	+1	known	nonsense	c.682	p.Q228*	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_YTH_domain,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,pfam_R3H_ss-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_R3H_ss-bd,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_R3H_ss-bd,pfscan_YTH_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	YTHDC2	HGNC	ENSG00000047188				36	0	0	50	22	30.5556
PRR16	0	genome.wustl.edu	37	5	120021685	120021685	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	120021685	120021685	C	A	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	missense	c.196	p.Q66K	1.000	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838				24	0	0	68	35	33.9806
FBN2	0	genome.wustl.edu	37	5	127686616	127686616	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	127686616	127686616	T	G	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	missense	c.2756	p.E919A	1.000	pirsf_FBN,pfam_TB_dom,superfamily_TB_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829				55	0	0	110	14	11.2903
HTR4	0	genome.wustl.edu	37	5	147900486	147900486	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	147900486	147900486	G	A	SNP	HTR4	ENST00000362016	human	ensembl	74_37	-1	known	missense	c.548	p.A183V	0.004	pfscan_GPCR_Rhodpsn_7TM,prints_5HT4_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HTR4	HGNC	ENSG00000164270				23	0	0	16	37	69.8113
HMP19	0	genome.wustl.edu	37	5	173491317	173491317	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	173491317	173491317	C	T	SNP	HMP19	ENST00000303177	human	ensembl	74_37	+1	known	missense	c.212	p.T71M	1.000	pfam_Calcyon_neuron-sp,pirsf_Calcyon_neuron-sp	pfam_Calcyon_neuron-sp,pirsf_Calcyon_neuron-sp	-	no_errors	NSG2	Uniprot_gn	ENSG00000170091				9	0	0	41	16	28.0702
GUSBP1	0	genome.wustl.edu	37	5	21497235	21497235	+	RNA	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	21497235	21497235	C	T	SNP	GUSBP1	ENST00000508260	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GUSBP1	HGNC	ENSG00000183666				45	0	0	95	5	5
UGT3A2	0	genome.wustl.edu	37	5	36049480	36049480	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	36049480	36049480	C	T	SNP	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	silent	c.354	p.A118	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671				28	0	0	148	30	16.8539
VCAN	0	genome.wustl.edu	37	5	82850854	82850854	+	Silent	SNP	A	A	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	5	82850854	82850854	A	G	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	silent	c.9732	p.T3244	0.533	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				33	0	0	49	23	31.9444
CLVS2	0	genome.wustl.edu	37	6	123369783	123369783	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	123369783	123369783	G	A	SNP	CLVS2	ENST00000275162	human	ensembl	74_37	+1	known	missense	c.581	p.R194Q	1.000	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	CLVS2	HGNC	ENSG00000146352				32	0	0	93	67	41.875
STX11	0	genome.wustl.edu	37	6	144508430	144508430	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	144508430	144508430	C	T	SNP	STX11	ENST00000367568	human	ensembl	74_37	+1	known	silent	c.666	p.R222	0.998	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX11	HGNC	ENSG00000135604				64	0	0	139	16	10.3226
HIST1H2AK	0	genome.wustl.edu	37	6	27806093	27806093	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	27806093	27806093	C	A	SNP	HIST1H2AK	ENST00000330180	human	ensembl	74_37	-1	known	missense	c.25	p.G9C	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AK	HGNC	ENSG00000184348				38	0	0	78	16	17.0213
HLA-A	0	genome.wustl.edu	37	6	29910607	29910607	+	Silent	SNP	G	G	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	29910607	29910607	G	C	SNP	HLA-A	ENST00000376806	human	ensembl	74_37	+1	known	silent	c.147	p.V49	0.021	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-A	HGNC	ENSG00000206503				43	0	0	60	10	14.2857
PPP1R10	0	genome.wustl.edu	37	6	30569423	30569423	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	30569423	30569423	C	T	SNP	PPP1R10	ENST00000376511	human	ensembl	74_37	-1	known	missense	c.2726	p.R909H	1.000	pfam_Znf_CCCH,smart_Znf_CCCH	pfam_TFIIS_N,pfam_Znf_CCCH,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_Znf_CCCH	-	no_errors	PPP1R10	HGNC	ENSG00000204569				33	0	0	29	33	53.2258
DDR1	0	genome.wustl.edu	37	6	30861167	30861167	+	Silent	SNP	C	C	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	30861167	30861167	C	G	SNP	DDR1	ENST00000376575	human	ensembl	74_37	+1	known	silent	c.1314	p.L438	0.452	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR1	HGNC	ENSG00000204580				17	0	0	30	12	28.5714
VWA7	0	genome.wustl.edu	37	6	31736828	31736828	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	31736828	31736828	C	T	SNP	VWA7	ENST00000375686	human	ensembl	74_37	-1	known	silent	c.1470	p.V490	1.000	NULL	NULL	-	no_errors	VWA7	HGNC	ENSG00000204396				15	0	0	32	6	15.7895
TNXB	0	genome.wustl.edu	37	6	32053689	32053689	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	32053689	32053689	G	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.2986	p.R996W	0.002	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				71	0	0	102	30	22.7273
DLK2	0	genome.wustl.edu	37	6	43418488	43418488	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	43418488	43418488	C	T	SNP	DLK2	ENST00000357338	human	ensembl	74_37	-1	known	missense	c.941	p.G314E	0.997	NULL	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLK2	HGNC	ENSG00000171462				108	0	0	131	39	22.9412
CNR1	0	genome.wustl.edu	37	6	88853594	88853594	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	88853594	88853594	G	A	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.1400	p.T467M	1.000	pirsf_Canbinoid_rcpt_1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432				149	1	0.666667	299	91	23.3333
PNISR	0	genome.wustl.edu	37	6	99858715	99858715	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	6	99858715	99858715	C	A	SNP	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	missense	c.403	p.A135S	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424				55	0	0	83	40	32.5203
OR9A4	0	genome.wustl.edu	37	7	141619040	141619040	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	141619040	141619040	G	A	SNP	OR9A4	ENST00000548136	human	ensembl	74_37	+1	known	missense	c.365	p.R122H	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A4	HGNC	ENSG00000258083				83	0	0	160	63	28.2511
OR2A1	0	genome.wustl.edu	37	7	144015544	144015544	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	144015544	144015544	C	T	SNP	OR2A1	ENST00000408951	human	ensembl	74_37	+1	known	silent	c.327	p.S109	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A1	HGNC	ENSG00000221970				86	0	0	181	27	12.9808
HECW1	0	genome.wustl.edu	37	7	43351432	43351432	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	43351432	43351432	G	A	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	missense	c.98	p.R33H	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746				70	0	0	231	43	15.6934
NPC1L1	0	genome.wustl.edu	37	7	44555794	44555794	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	44555794	44555794	C	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	silent	c.3603	p.A1201	0.001	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				10	0	0	15	17	53.125
RADIL	0	genome.wustl.edu	37	7	4856077	4856077	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	4856077	4856077	G	A	SNP	RADIL	ENST00000399583	human	ensembl	74_37	-1	known	missense	c.1748	p.P583L	0.998	pfscan_Dilute	pfam_Dil_domain,pfam_Ras-assoc,pfam_PDZ,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927				23	0	0	37	22	37.2881
TNRC18	0	genome.wustl.edu	37	7	5410958	5410958	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	5410958	5410958	C	T	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	silent	c.3267	p.P1089	0.023	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				26	0	0	80	13	13.9785
ADAM22	0	genome.wustl.edu	37	7	87564471	87564471	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	87564471	87564471	G	A	SNP	ADAM22	ENST00000265727	human	ensembl	74_37	+1	known	silent	c.216	p.T72	0.983	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM22	HGNC	ENSG00000008277				27	0	0	34	11	24.4444
DLX5	0	genome.wustl.edu	37	7	96651486	96651486	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	96651486	96651486	G	A	SNP	DLX5	ENST00000486603	human	ensembl	74_37	-1	putative	missense	c.551	p.A184V	0.000	smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	DLX5	HGNC	ENSG00000105880				75	0	0	151	40	20.9424
ANXA13	0	genome.wustl.edu	37	8	124710691	124710691	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	124710691	124710691	T	C	SNP	ANXA13	ENST00000262219	human	ensembl	74_37	-1	known	missense	c.418	p.M140V	1.000	pfam_Annexin_repeat,prints_Annexin	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXIII	-	no_errors	ANXA13	HGNC	ENSG00000104537				114	0	0	257	50	16.2866
CPSF1	0	genome.wustl.edu	37	8	145619684	145619684	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	145619684	145619684	G	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	silent	c.3654	p.V1218	1.000	pfam_Cleavage/polyA-sp_fac_asu_C	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				20	0	0	27	10	27.027
SLC7A2	0	genome.wustl.edu	37	8	17419560	17419560	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	17419560	17419560	G	A	SNP	SLC7A2	ENST00000004531	human	ensembl	74_37	+1	known	missense	c.1732	p.V578I	0.000	tigrfam_Cat_AA_permease	pfam_AA-permease/SLC12A_dom,tigrfam_Cat_AA_permease	-	no_errors	SLC7A2	HGNC	ENSG00000003989				54	0	0	22	40	64.5161
PREX2	0	genome.wustl.edu	37	8	69002817	69002817	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	69002817	69002817	C	G	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.2117	p.T706S	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				31	0	0	58	21	26.5823
GDF6	0	genome.wustl.edu	37	8	97157137	97157137	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	97157137	97157137	C	A	SNP	GDF6	ENST00000287020	human	ensembl	74_37	-1	known	missense	c.1022	p.R341L	0.999	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466				29	0	0	23	13	36.1111
NR4A3	0	genome.wustl.edu	37	9	102590396	102590396	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	9	102590396	102590396	G	A	SNP	NR4A3	ENST00000330847	human	ensembl	74_37	+1	known	silent	c.105	p.S35	0.831	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508				56	0	0	80	12	13.0435
ASTN2	0	genome.wustl.edu	37	9	120053646	120053646	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	9	120053646	120053646	T	G	SNP	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	missense	c.589	p.I197L	1.000	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219				57	0	0	33	26	44.0678
CDK5RAP2	0	genome.wustl.edu	37	9	123253728	123253728	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	9	123253728	123253728	G	A	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.1339	p.R447C	1.000	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				15	0	0	23	6	20.6897
TBC1D8B	0	genome.wustl.edu	37	X	106069407	106069407	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	106069407	106069407	T	A	SNP	TBC1D8B	ENST00000357242	human	ensembl	74_37	+1	known	missense	c.975	p.N325K	1.000	pfam_GRAM,smart_GRAM	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8B	HGNC	ENSG00000133138				21	0	0	79	48	37.7953
COL4A6	0	genome.wustl.edu	37	X	107403858	107403858	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	107403858	107403858	C	T	SNP	COL4A6	ENST00000372216	human	ensembl	74_37	-1	known	missense	c.4363	p.G1455R	0.999	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A6	HGNC	ENSG00000197565				42	0	0	77	50	39.3701
TENM1	0	genome.wustl.edu	37	X	123540199	123540199	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	123540199	123540199	G	A	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.5123	p.T1708M	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694				29	0	0	105	73	41.0112
DCAF12L2	0	genome.wustl.edu	37	X	125299289	125299289	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	125299289	125299289	C	T	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	missense	c.619	p.V207I	0.754	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354				46	0	0	47	37	44.0476
SOX3	0	genome.wustl.edu	37	X	139586543	139586543	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	139586543	139586543	C	T	SNP	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	missense	c.683	p.G228D	0.997	pfam_TF_SOX	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595				9	0	0	25	17	40.4762
CSF2RA	0	genome.wustl.edu	37	X	1413315	1413315	+	Silent	SNP	G	G	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	1413315	1413315	G	A	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	silent	c.741	p.S247	0.000	superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223				106	0	0	183	48	20.7792
ASMTL	0	genome.wustl.edu	37	X	1546729	1546729	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	1546729	1546729	C	T	SNP	ASMTL	ENST00000381317	human	ensembl	74_37	-1	known	silent	c.795	p.A265	0.000	NULL	pfam_Maf,pfam_O_MeTrfase_2,tigrfam_Maf	-	no_errors	ASMTL	HGNC	ENSG00000169093				135	0	0	152	46	23.2323
PAGE3	0	genome.wustl.edu	37	X	55290256	55290256	+	Silent	SNP	C	C	T			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	X	55290256	55290256	C	T	SNP	PAGE3	ENST00000374951	human	ensembl	74_37	-1	known	silent	c.81	p.V27	0.020	pfam_GAGE	pfam_GAGE	-	no_errors	PAGE3	HGNC	ENSG00000204279				12	0	0	40	25	38.4615
ENSG00000203849	0	genome.wustl.edu	37	1	142720897	142720898	+	RNA	INS	-	-	A			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	142720897	142720898	-	A	INS	ENSG00000203849	ENST00000595144	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.135:0.096	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849				8	0	0	86	10	10.4167
SLC26A9	0	genome.wustl.edu	37	1	205884241	205884251	+	Frame_Shift_Del	DEL	GGGTGAAGAGT	GGGTGAAGAGT	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	GGGTGAAGAGT	GGGTGAAGAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	1	205884241	205884251	GGGTGAAGAGT	-	DEL	SLC26A9	ENST00000340781	human	ensembl	74_37	-1	known	frame_shift_del	c.2443_2433	p.L812fs	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	NULL	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A9	HGNC	ENSG00000174502				70	0	0	106	8	7.01754
EIF3A	0	genome.wustl.edu	37	10	120809415	120809415	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	10	120809415	120809415	T	-	DEL	EIF3A	ENST00000369144	human	ensembl	74_37	-1	known	frame_shift_del	c.2556	p.E853fs	1.000	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	EIF3A	HGNC	ENSG00000107581				146	0	0	325	153	32.0084
MICALCL	0	genome.wustl.edu	37	11	12316344	12316345	+	In_Frame_Ins	INS	-	-	CTC			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	11	12316344	12316345	-	CTC	INS	MICALCL	ENST00000256186	human	ensembl	74_37	+1	known	in_frame_ins	c.1366_1367	p.460in_frame_insP	0.004:0.006	NULL	pfam_DUF3585,smart_ProQ/FinO	-	no_errors	MICALCL	HGNC	ENSG00000133808				22	0	0	57	6	9.52381
EP400	0	genome.wustl.edu	37	12	132547093	132547094	+	In_Frame_Ins	INS	-	-	CAG			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	12	132547093	132547094	-	CAG	INS	EP400	ENST00000333577	human	ensembl	74_37	+1	known	in_frame_ins	c.8289_8290	p.2767in_frame_insQ	0.900:0.920	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				64	0	0	99	17	14.6552
GLG1	0	genome.wustl.edu	37	16	74502858	74502858	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	16	74502858	74502858	C	-	DEL	GLG1	ENST00000205061	human	ensembl	74_37	-1	known	frame_shift_del	c.2422	p.E808fs	1.000	pfam_Cys-rich_GLG1_repeat	pfam_Cys-rich_GLG1_repeat	-	no_errors	GLG1	HGNC	ENSG00000090863				62	0	0	71	15	17.4419
DIDO1	0	genome.wustl.edu	37	20	61512380	61512381	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	20	61512380	61512381	-	G	INS	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	frame_shift_ins	c.4928_4927	p.R1643fs	0.000:0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				40	0	0	62	8	11.4286
MICALL2	0	genome.wustl.edu	37	7	1478596	1478596	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	1478596	1478596	C	-	DEL	MICALL2	ENST00000297508	human	ensembl	74_37	-1	known	frame_shift_del	c.2002	p.A668fs	0.015	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL2	HGNC	ENSG00000164877				60	0	0	66	63	48.8372
AKAP9	0	genome.wustl.edu	37	7	91671392	91671393	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	7	91671392	91671393	AG	-	DEL	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	frame_shift_del	c.4986_4987	p.R1666fs	1.000:1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				17	0	0	111	6	5.12821
VPS13B	0	genome.wustl.edu	37	8	100523457	100523458	+	In_Frame_Ins	INS	-	-	AAG			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	100523457	100523458	-	AAG	INS	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	in_frame_ins	c.4425_4426	p.1476in_frame_insK	0.998:1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				31	0	0	121	88	42.1053
ZNF395	0	genome.wustl.edu	37	8	28209226	28209228	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	8	28209226	28209228	GCA	-	DEL	ZNF395	ENST00000344423	human	ensembl	74_37	-1	known	in_frame_del	c.1019_1017	p.A341in_frame_del	0.082:0.295:0.411	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF395	HGNC	ENSG00000186918				105	0	0	140	10	6.66667
ZNF189	0	genome.wustl.edu	37	9	104171731	104171752	+	Frame_Shift_Del	DEL	ATACACACAGGAGAGAAACCTT	ATACACACAGGAGAGAAACCTT	-			TCGA-CD-8533-01A-11D-2340-08	TCGA-CD-8533-10A-01D-2341-08	ATACACACAGGAGAGAAACCTT	ATACACACAGGAGAGAAACCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a110abe-5f70-40d6-91b0-cabdf62cc4a9	ef0ea92f-074f-4403-b367-d73456d3b6a3	9	104171731	104171752	ATACACACAGGAGAGAAACCTT	-	DEL	ZNF189	ENST00000339664	human	ensembl	74_37	+1	known	frame_shift_del	c.1681_1702	p.H562fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF189	HGNC	ENSG00000136870				40	0	0	39	8	17.0213
