Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
LOC100129138	0	genome.wustl.edu	37	1	104615911	104615911	+	RNA	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	104615911	104615911	T	G	SNP	LOC100129138	ENST00000418362	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	RP11-364B6.1	Clone_based_vega_gene	ENSG00000215869				15	0	0	15	4	21.0526
PRAMEF4	0	genome.wustl.edu	37	1	12939698	12939698	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	12939698	12939698	T	G	SNP	PRAMEF4	ENST00000235349	human	ensembl	74_37	-1	known	missense	c.1104	p.Q368H	0.002	NULL	NULL	-	no_errors	PRAMEF4	HGNC	ENSG00000243073				298	0	0	173	119	40.7534
PDE4DIP	0	genome.wustl.edu	37	1	144952198	144952198	+	Nonstop_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	144952198	144952198	T	C	SNP	PDE4DIP	ENST00000369348	human	ensembl	74_37	-1	known	nonstop	c.932	p.*311W	0.977	NULL	pfam_Spindle_assoc	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				118	1	0.840336	128	22	14.6667
FLG2	0	genome.wustl.edu	37	1	152327439	152327439	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	152327439	152327439	A	C	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	missense	c.2823	p.S941R	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520				288	0	0	355	117	24.7881
FLG2	0	genome.wustl.edu	37	1	152327670	152327670	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	152327670	152327670	A	C	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	missense	c.2592	p.S864R	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520				176	0	0	254	22	7.97101
LMNA	0	genome.wustl.edu	37	1	156100427	156100427	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	156100427	156100427	G	A	SNP	LMNA	ENST00000368300	human	ensembl	74_37	+1	known	missense	c.376	p.D126N	1.000	pfam_IF	pfam_IF,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNA	HGNC	ENSG00000160789				40	0	0	28	11	28.2051
CD1C	0	genome.wustl.edu	37	1	158259869	158259869	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	158259869	158259869	G	A	SNP	CD1C	ENST00000368170	human	ensembl	74_37	+1	known	silent	c.15	p.Q5	0.000	NULL	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1C	HGNC	ENSG00000158481				80	0	0	57	26	31.3253
CD1B	0	genome.wustl.edu	37	1	158298772	158298772	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	158298772	158298772	C	G	SNP	CD1B	ENST00000368168	human	ensembl	74_37	-1	known	missense	c.919	p.A307P	0.003	NULL	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1B	HGNC	ENSG00000158485				53	0	0	54	11	16.9231
OR6Y1	0	genome.wustl.edu	37	1	158517014	158517014	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	158517014	158517014	A	C	SNP	OR6Y1	ENST00000302617	human	ensembl	74_37	-1	known	missense	c.882	p.I294M	0.981	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6Y1	HGNC	ENSG00000197532				88	0	0	70	31	30.6931
OR10J3	0	genome.wustl.edu	37	1	159283665	159283665	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	159283665	159283665	T	G	SNP	OR10J3	ENST00000332217	human	ensembl	74_37	-1	known	missense	c.785	p.K262T	1.000	pfam_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J3	HGNC	ENSG00000196266				65	0	0	77	28	26.6667
OR10J3	0	genome.wustl.edu	37	1	159284373	159284373	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	159284373	159284373	A	C	SNP	OR10J3	ENST00000332217	human	ensembl	74_37	-1	known	missense	c.77	p.L26R	0.093	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J3	HGNC	ENSG00000196266				165	0	0	134	48	26.3736
OLFML2B	0	genome.wustl.edu	37	1	161987209	161987209	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	161987209	161987209	C	T	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	missense	c.527	p.R176Q	0.996	NULL	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745				60	0	0	35	45	56.25
DDR2	0	genome.wustl.edu	37	1	162741933	162741933	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	162741933	162741933	G	A	SNP	DDR2	ENST00000367921	human	ensembl	74_37	+1	known	missense	c.1624	p.A542T	1.000	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733				32	0	0	22	11	33.3333
SELP	0	genome.wustl.edu	37	1	169562867	169562867	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	169562867	169562867	G	A	SNP	SELP	ENST00000263686	human	ensembl	74_37	-1	known	silent	c.2383	p.L795	0.998	NULL	pfam_Sushi_SCR_CCP,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELP	HGNC	ENSG00000174175				38	0	0	43	17	28.3333
TNN	0	genome.wustl.edu	37	1	175046771	175046771	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	175046771	175046771	T	C	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	silent	c.217	p.L73	0.000	NULL	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				29	0	0	35	12	25.5319
PAPPA2	0	genome.wustl.edu	37	1	176681096	176681096	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	176681096	176681096	A	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.3777	p.K1259	0.058	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				66	0	0	48	27	36
UBR4	0	genome.wustl.edu	37	1	19489100	19489100	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	19489100	19489100	C	T	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	silent	c.4770	p.V1590	0.985	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481				20	0	0	22	13	37.1429
KCNT2	0	genome.wustl.edu	37	1	196227371	196227371	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	196227371	196227371	A	G	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.3164	p.L1055P	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				53	0	0	64	22	25.5814
KCNT2	0	genome.wustl.edu	37	1	196250004	196250004	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	196250004	196250004	G	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.2896	p.L966I	0.979	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				36	0	0	37	17	31.4815
CFHR3	0	genome.wustl.edu	37	1	196757392	196757392	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	196757392	196757392	C	T	SNP	CFHR3	ENST00000367425	human	ensembl	74_37	+1	known	silent	c.477	p.S159	0.026	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR3	HGNC	ENSG00000116785				13	0	0	19	4	17.3913
FMOD	0	genome.wustl.edu	37	1	203317143	203317143	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	203317143	203317143	A	G	SNP	FMOD	ENST00000354955	human	ensembl	74_37	-1	known	missense	c.256	p.F86L	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	FMOD	HGNC	ENSG00000122176				8	0	0	21	9	30
PCNXL2	0	genome.wustl.edu	37	1	233344423	233344423	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	233344423	233344423	T	G	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.2704	p.I902L	1.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				47	0	0	39	16	29.0909
RYR2	0	genome.wustl.edu	37	1	237608821	237608821	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	237608821	237608821	A	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.1285	p.R429W	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				29	0	0	34	6	15
MYOM3	0	genome.wustl.edu	37	1	24413270	24413270	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	24413270	24413270	A	G	SNP	MYOM3	ENST00000330966	human	ensembl	74_37	-1	known	silent	c.1665	p.P555	0.835	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM3	HGNC	ENSG00000142661				65	0	0	43	4	8.51064
AHCTF1	0	genome.wustl.edu	37	1	247021041	247021041	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	247021041	247021041	G	A	SNP	AHCTF1	ENST00000326225	human	ensembl	74_37	-1	known	missense	c.4235	p.P1412L	0.000	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	AHCTF1	HGNC	ENSG00000153207				31	0	0	47	3	6
OR14A16	0	genome.wustl.edu	37	1	247978545	247978545	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	247978545	247978545	A	C	SNP	OR14A16	ENST00000357627	human	ensembl	74_37	-1	known	missense	c.487	p.S163A	0.011	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14A16	HGNC	ENSG00000196772				65	0	0	114	29	20.2797
COL16A1	0	genome.wustl.edu	37	1	32120438	32120438	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	32120438	32120438	C	T	SNP	COL16A1	ENST00000271069	human	ensembl	74_37	-1	known	missense	c.4312	p.E1438K	1.000	NULL	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL16A1	HGNC	ENSG00000084636				187	0	0	91	56	38.0952
MAP7D1	0	genome.wustl.edu	37	1	36636835	36636835	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	36636835	36636835	C	T	SNP	MAP7D1	ENST00000373151	human	ensembl	74_37	+1	known	missense	c.310	p.R104W	0.555	NULL	pfam_MAP7	-	no_errors	MAP7D1	HGNC	ENSG00000116871				57	0	0	31	3	8.82353
PTPRF	0	genome.wustl.edu	37	1	44086848	44086848	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	44086848	44086848	T	A	SNP	PTPRF	ENST00000359947	human	ensembl	74_37	+1	known	missense	c.5600	p.M1867K	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC	ENSG00000142949				25	0	0	12	7	36.8421
LRRIQ3	0	genome.wustl.edu	37	1	74507054	74507054	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	74507054	74507054	A	C	SNP	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	missense	c.1561	p.L521V	0.000	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620				69	0	0	40	41	50.6173
H6PD	0	genome.wustl.edu	37	1	9322285	9322285	+	Silent	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	9322285	9322285	A	C	SNP	H6PD	ENST00000377403	human	ensembl	74_37	+1	known	silent	c.913	p.R305	0.910	pfam_G6P_DH_C	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,prints_G6P_DH,tigrfam_6-phosphogluconolactonase_DevB	-	no_errors	H6PD	HGNC	ENSG00000049239				17	0	0	4	8	66.6667
LPPR4	0	genome.wustl.edu	37	1	99772202	99772202	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	1	99772202	99772202	G	C	SNP	LPPR4	ENST00000370185	human	ensembl	74_37	+1	known	missense	c.1928	p.G643A	1.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR4	Uniprot_gn	ENSG00000117600				35	0	0	16	7	30.4348
CUZD1	0	genome.wustl.edu	37	10	124594423	124594423	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	124594423	124594423	T	A	SNP	CUZD1	ENST00000368904	human	ensembl	74_37	-1	known	missense	c.1181	p.N394I	0.242	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	CUZD1	HGNC	ENSG00000138161				35	0	0	50	26	34.2105
PTF1A	0	genome.wustl.edu	37	10	23481522	23481522	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	23481522	23481522	C	T	SNP	PTF1A	ENST00000376504	human	ensembl	74_37	+1	known	silent	c.63	p.F21	0.997	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	PTF1A	HGNC	ENSG00000168267				58	0	0	46	13	22.0339
GPR158	0	genome.wustl.edu	37	10	25888082	25888082	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	25888082	25888082	T	G	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.3527	p.F1176C	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				32	0	0	28	17	37.7778
MYO3A	0	genome.wustl.edu	37	10	26432425	26432425	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	26432425	26432425	G	A	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.2311	p.D771N	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				20	0	0	30	13	30.2326
ANK3	0	genome.wustl.edu	37	10	61832206	61832206	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	61832206	61832206	T	G	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.8433	p.K2811N	0.028	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				50	0	0	66	33	33.3333
ANK3	0	genome.wustl.edu	37	10	61834976	61834976	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	61834976	61834976	T	G	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.5663	p.K1888T	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				59	0	0	57	28	32.9412
JMJD1C	0	genome.wustl.edu	37	10	64974609	64974609	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	64974609	64974609	C	T	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	missense	c.1318	p.D440N	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				54	0	0	81	30	27.027
ITIH5	0	genome.wustl.edu	37	10	7618705	7618705	+	Silent	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	7618705	7618705	T	G	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	silent	c.1689	p.G563	0.001	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243				27	0	0	32	25	43.8596
LARP4B	0	genome.wustl.edu	37	10	888940	888940	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	10	888940	888940	G	A	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	missense	c.578	p.T193M	1.000	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				30	0	0	35	12	25.5319
PGR	0	genome.wustl.edu	37	11	100999459	100999459	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	100999459	100999459	A	G	SNP	PGR	ENST00000325455	human	ensembl	74_37	-1	known	silent	c.343	p.L115	0.756	pfam_Progest_rcpt,prints_Progest_rcpt	pfam_Progest_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Progest_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	PGR	HGNC	ENSG00000082175				14	0	0	15	3	16.6667
DDI1	0	genome.wustl.edu	37	11	103908222	103908222	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	103908222	103908222	A	G	SNP	DDI1	ENST00000302259	human	ensembl	74_37	+1	known	silent	c.672	p.E224	1.000	pfam_Peptidase_aspartic_DDI1-type	pfam_Peptidase_aspartic_DDI1-type,pfam_Ubiquitin_dom,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	DDI1	HGNC	ENSG00000170967				131	0	0	84	43	33.8583
RDX	0	genome.wustl.edu	37	11	110126036	110126036	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	110126036	110126036	T	G	SNP	RDX	ENST00000530749	human	ensembl	74_37	-1	known	missense	c.773	p.K258T	1.000	pirsf_ERM,pfam_FERM_PH-like_C,pfscan_FERM_domain	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	RDX	HGNC	ENSG00000137710				25	0	0	35	8	18.6047
ZBTB16	0	genome.wustl.edu	37	11	113934258	113934258	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	113934258	113934258	C	G	SNP	ZBTB16	ENST00000335953	human	ensembl	74_37	+1	known	missense	c.236	p.T79S	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB16	HGNC	ENSG00000109906				40	0	0	43	8	15.6863
PHLDB1	0	genome.wustl.edu	37	11	118509945	118509945	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	118509945	118509945	G	A	SNP	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	silent	c.2712	p.P904	0.994	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144				86	0	0	52	14	21.2121
GRAMD1B	0	genome.wustl.edu	37	11	123477446	123477446	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	123477446	123477446	T	G	SNP	GRAMD1B	ENST00000322282	human	ensembl	74_37	+1	known	missense	c.1024	p.F342V	1.000	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1B	HGNC	ENSG00000023171				33	0	0	12	5	29.4118
OR6M1	0	genome.wustl.edu	37	11	123676403	123676403	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	123676403	123676403	T	G	SNP	OR6M1	ENST00000309154	human	ensembl	74_37	-1	known	missense	c.655	p.I219L	0.852	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6M1	HGNC	ENSG00000196099				22	0	0	36	13	26.5306
OR10G8	0	genome.wustl.edu	37	11	123900377	123900377	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	123900377	123900377	C	T	SNP	OR10G8	ENST00000431524	human	ensembl	74_37	+1	known	silent	c.48	p.P16	0.035	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G8	HGNC	ENSG00000234560				120	0	0	141	39	21.6667
NTM	0	genome.wustl.edu	37	11	132016335	132016335	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	132016335	132016335	C	T	SNP	NTM	ENST00000539799	human	ensembl	74_37	+1	known	silent	c.327	p.D109	0.831	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NTM	HGNC	ENSG00000182667				53	0	0	17	29	63.0435
THYN1	0	genome.wustl.edu	37	11	134121176	134121176	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	134121176	134121176	T	G	SNP	THYN1	ENST00000341541	human	ensembl	74_37	-1	known	missense	c.70	p.K24Q	0.484	NULL	pfam_EVE_domain,superfamily_PUA-like_domain	-	no_errors	THYN1	HGNC	ENSG00000151500				288	0	0	230	67	22.5589
DCDC1	0	genome.wustl.edu	37	11	31086653	31086653	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	31086653	31086653	T	G	SNP	DCDC1	ENST00000597505	human	ensembl	74_37	-1	putative	missense	c.2346	p.Q782H	0.983	superfamily_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Doublecortin_dom,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959				27	0	0	37	10	21.2766
OR51F1	0	genome.wustl.edu	37	11	4790367	4790367	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	4790367	4790367	A	G	SNP	OR51F1	ENST00000380383	human	ensembl	74_37	-1	known	missense	c.802	p.S268P	0.769	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51F1	HGNC	ENSG00000188069				40	0	0	57	26	31.3253
OR4A47	0	genome.wustl.edu	37	11	48511002	48511002	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	48511002	48511002	T	G	SNP	OR4A47	ENST00000446524	human	ensembl	74_37	+1	known	missense	c.658	p.L220V	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A47	HGNC	ENSG00000237388				58	0	0	81	36	30.7692
OR51S1	0	genome.wustl.edu	37	11	4869842	4869842	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	4869842	4869842	T	C	SNP	OR51S1	ENST00000322101	human	ensembl	74_37	-1	known	silent	c.597	p.E199	0.007	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51S1	HGNC	ENSG00000176922				83	0	0	64	27	29.6703
OR51G1	0	genome.wustl.edu	37	11	4945136	4945136	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	4945136	4945136	T	A	SNP	OR51G1	ENST00000321961	human	ensembl	74_37	-1	known	missense	c.434	p.K145M	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51G1	HGNC	ENSG00000176879				37	0	0	43	17	28.3333
OR51A4	0	genome.wustl.edu	37	11	4967541	4967541	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	4967541	4967541	G	A	SNP	OR51A4	ENST00000380373	human	ensembl	74_37	-1	known	missense	c.790	p.R264C	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51A4	HGNC	ENSG00000205497				152	0	0	214	24	10.084
OR4A5	0	genome.wustl.edu	37	11	51412307	51412307	+	Nonsense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	51412307	51412307	A	T	SNP	OR4A5	ENST00000319760	human	ensembl	74_37	-1	known	nonsense	c.89	p.L30*	0.068	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A5	HGNC	ENSG00000221840				37	0	0	37	15	28.8462
OR4P4	0	genome.wustl.edu	37	11	55406423	55406423	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	55406423	55406423	T	G	SNP	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	missense	c.590	p.V197G	0.218	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927				20	0	0	33	29	46.7742
OR5D14	0	genome.wustl.edu	37	11	55563048	55563048	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	55563048	55563048	G	T	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.17	p.R6M	0.025	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113				64	0	0	89	44	33.0827
OR52H1	0	genome.wustl.edu	37	11	5565929	5565929	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	5565929	5565929	A	T	SNP	OR52H1	ENST00000322653	human	ensembl	74_37	-1	known	missense	c.825	p.N275K	0.891	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52H1	HGNC	ENSG00000181616				56	0	0	63	27	30
OR8J3	0	genome.wustl.edu	37	11	55904446	55904446	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	55904446	55904446	A	C	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.749	p.V250G	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822				48	0	0	70	24	25.5319
OR8K1	0	genome.wustl.edu	37	11	56113874	56113874	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	56113874	56113874	T	G	SNP	OR8K1	ENST00000279783	human	ensembl	74_37	+1	known	missense	c.360	p.I120M	0.038	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K1	HGNC	ENSG00000150261				145	0	0	181	66	26.7206
P2RX3	0	genome.wustl.edu	37	11	57114108	57114108	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	57114108	57114108	C	T	SNP	P2RX3	ENST00000263314	human	ensembl	74_37	+1	known	silent	c.210	p.Y70	0.997	pfam_P2X_purnocptor,prints_P2X3_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X3_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX3	HGNC	ENSG00000109991				29	0	0	30	10	25
BEST1	0	genome.wustl.edu	37	11	61729795	61729795	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	61729795	61729795	T	C	SNP	BEST1	ENST00000449131	human	ensembl	74_37	+1	known	missense	c.989	p.I330T	0.014	NULL	pfam_Bestrophin/UPF0187	-	no_errors	BEST1	HGNC	ENSG00000167995				25	0	0	38	3	7.31707
AHNAK	0	genome.wustl.edu	37	11	62287621	62287621	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	62287621	62287621	G	A	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	silent	c.14268	p.D4756	0.023	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				169	0	0	189	79	29.4776
CCDC88B	0	genome.wustl.edu	37	11	64109148	64109148	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	64109148	64109148	G	A	SNP	CCDC88B	ENST00000356786	human	ensembl	74_37	+1	known	silent	c.609	p.E203	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam	-	no_errors	CCDC88B	HGNC	ENSG00000168071				25	0	0	22	3	12
MAP4K2	0	genome.wustl.edu	37	11	64564487	64564487	+	Silent	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	64564487	64564487	G	C	SNP	MAP4K2	ENST00000294066	human	ensembl	74_37	-1	known	silent	c.1374	p.S458	0.708	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K2	HGNC	ENSG00000168067				53	0	0	40	15	27.2727
NUMA1	0	genome.wustl.edu	37	11	71733400	71733400	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	71733400	71733400	A	T	SNP	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	missense	c.357	p.F119L	1.000	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497				150	0	0	142	42	22.8261
USP35	0	genome.wustl.edu	37	11	77921035	77921035	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	77921035	77921035	G	A	SNP	USP35	ENST00000529308	human	ensembl	74_37	+1	known	missense	c.2134	p.V712M	0.007	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369				30	0	0	16	10	38.4615
OR10A3	0	genome.wustl.edu	37	11	7960149	7960149	+	Silent	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	7960149	7960149	T	G	SNP	OR10A3	ENST00000360759	human	ensembl	74_37	-1	known	silent	c.919	p.R307	0.015	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A3	HGNC	ENSG00000170683				35	0	0	43	13	23.2143
PIDD	0	genome.wustl.edu	37	11	799408	799408	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	799408	799408	G	A	SNP	PIDD	ENST00000347755	human	ensembl	74_37	-1	known	missense	c.2632	p.R878C	0.134	superfamily_DEATH-like_dom	pfam_Peptidase_S68_pidd,pfam_Death_domain,pfam_Leu-rich_rpt,pfam_ZU5,superfamily_DEATH-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Death_domain,pfscan_Death_domain,pfscan_ZU5	-	no_errors	PIDD	HGNC	ENSG00000177595				93	0	0	41	22	34.9206
GRM5	0	genome.wustl.edu	37	11	88781002	88781002	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	88781002	88781002	T	C	SNP	GRM5	ENST00000305447	human	ensembl	74_37	-1	known	silent	c.39	p.K13	1.000	prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_5,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_1,pfscan_GPCR_3_C	-	no_errors	GRM5	HGNC	ENSG00000168959				25	0	0	37	8	17.7778
PIWIL4	0	genome.wustl.edu	37	11	94337220	94337220	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	94337220	94337220	C	T	SNP	PIWIL4	ENST00000299001	human	ensembl	74_37	+1	known	silent	c.1636	p.L546	0.959	superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL4	HGNC	ENSG00000134627				9	0	0	26	14	35
VPS29	0	genome.wustl.edu	37	12	110939866	110939866	+	RNA	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	110939866	110939866	G	C	SNP	VPS29	ENST00000548259	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.508	-	-	-	no_errors	VPS29	HGNC	ENSG00000111237				27	0	0	44	23	34.3284
SLCO1C1	0	genome.wustl.edu	37	12	20854340	20854340	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	20854340	20854340	G	T	SNP	SLCO1C1	ENST00000381552	human	ensembl	74_37	+1	known	missense	c.218	p.R73M	1.000	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO1C1	HGNC	ENSG00000139155				62	0	0	12	58	82.8571
SLCO1B1	0	genome.wustl.edu	37	12	21370153	21370153	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	21370153	21370153	A	C	SNP	SLCO1B1	ENST00000256958	human	ensembl	74_37	+1	known	missense	c.1598	p.K533T	0.533	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B1	HGNC	ENSG00000134538				36	0	0	5	35	87.5
ABCC9	0	genome.wustl.edu	37	12	22047092	22047092	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	22047092	22047092	G	A	SNP	ABCC9	ENST00000261200	human	ensembl	74_37	-1	known	missense	c.1676	p.A559V	0.921	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,prints_Sulphonylurea_rcpt-2	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2	-	no_errors	ABCC9	HGNC	ENSG00000069431				62	0	0	4	40	90.9091
KRAS	0	genome.wustl.edu	37	12	25398281	25398281	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	25398281	25398281	C	T	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.38	p.G13D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703				11	0	0	1	11	91.6667
SCAF11	0	genome.wustl.edu	37	12	46355485	46355485	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	46355485	46355485	C	T	SNP	SCAF11	ENST00000369367	human	ensembl	74_37	-1	known	missense	c.217	p.E73K	1.000	smart_Znf_RING,pfscan_Znf_RING	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	SCAF11	HGNC	ENSG00000139218				41	0	0	47	40	45.977
HDAC7	0	genome.wustl.edu	37	12	48196037	48196037	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	48196037	48196037	C	T	SNP	HDAC7	ENST00000380610	human	ensembl	74_37	-1	known	missense	c.91	p.G31S	0.998	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC7	HGNC	ENSG00000061273				25	0	0	21	2	8.69565
TESPA1	0	genome.wustl.edu	37	12	55360985	55360985	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	55360985	55360985	A	T	SNP	TESPA1	ENST00000316577	human	ensembl	74_37	-1	known	missense	c.292	p.L98M	1.000	NULL	NULL	-	no_errors	TESPA1	HGNC	ENSG00000135426				29	0	0	28	8	22.2222
IKZF4	0	genome.wustl.edu	37	12	56415326	56415326	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	56415326	56415326	G	A	SNP	IKZF4	ENST00000262032	human	ensembl	74_37	+1	known	missense	c.49	p.V17I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF4	HGNC	ENSG00000123411				15	0	0	6	8	57.1429
VWF	0	genome.wustl.edu	37	12	6103072	6103072	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	6103072	6103072	C	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.6554	p.R2185Q	0.997	pirsf_VWF,pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				47	0	0	5	37	88.0952
GPR162	0	genome.wustl.edu	37	12	6936089	6936089	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	6936089	6936089	G	A	SNP	GPR162	ENST00000311268	human	ensembl	74_37	+1	known	missense	c.1487	p.R496Q	0.469	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR162,prints_GCR_153/162	-	no_errors	GPR162	HGNC	ENSG00000250510				130	1	0.763359	73	4	5.19481
CAPS2	0	genome.wustl.edu	37	12	75698628	75698628	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	75698628	75698628	A	C	SNP	CAPS2	ENST00000409445	human	ensembl	74_37	-1	known	missense	c.745	p.L249V	0.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CAPS2	HGNC	ENSG00000180881				44	0	0	26	28	51.8519
NAV3	0	genome.wustl.edu	37	12	78443823	78443823	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	78443823	78443823	T	C	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	silent	c.2074	p.L692	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				27	0	0	34	19	35.8491
MIR618	0	genome.wustl.edu	37	12	81329555	81329555	+	RNA	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	81329555	81329555	T	C	SNP	MIR618	ENST00000385287	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR618	HGNC	ENSG00000208022				22	0	0	35	13	27.0833
C12orf50	0	genome.wustl.edu	37	12	88383059	88383059	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	88383059	88383059	T	G	SNP	C12orf50	ENST00000298699	human	ensembl	74_37	-1	known	missense	c.682	p.K228Q	0.988	NULL	NULL	-	no_errors	C12orf50	HGNC	ENSG00000165805				9	0	0	29	13	30.9524
ENSG00000243008	0	genome.wustl.edu	37	13	25144710	25144710	+	RNA	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	25144710	25144710	A	G	SNP	ENSG00000243008	ENST00000453498	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-556N21.1	Clone_based_vega_gene	ENSG00000243008				11	0	0	22	8	26.6667
ENSG00000243008	0	genome.wustl.edu	37	13	25144712	25144712	+	RNA	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	25144712	25144712	A	C	SNP	ENSG00000243008	ENST00000453498	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-556N21.1	Clone_based_vega_gene	ENSG00000243008				11	0	0	22	8	26.6667
FRY	0	genome.wustl.edu	37	13	32699009	32699009	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	32699009	32699009	C	A	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.713	p.A238D	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910				60	0	0	78	44	36.0656
SMAD9	0	genome.wustl.edu	37	13	37439801	37439801	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	37439801	37439801	G	A	SNP	SMAD9	ENST00000379826	human	ensembl	74_37	-1	known	silent	c.876	p.S292	0.995	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD9	HGNC	ENSG00000120693				63	0	0	48	18	27.2727
POSTN	0	genome.wustl.edu	37	13	38158997	38158997	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	38158997	38158997	C	T	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	missense	c.964	p.E322K	1.000	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_FAS1_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110				35	0	0	51	19	27.1429
SPERT	0	genome.wustl.edu	37	13	46287490	46287490	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	46287490	46287490	C	T	SNP	SPERT	ENST00000310521	human	ensembl	74_37	+1	known	silent	c.330	p.A110	0.149	NULL	NULL	-	no_errors	SPERT	HGNC	ENSG00000174015				85	0	0	70	24	25.5319
HTR2A	0	genome.wustl.edu	37	13	47409677	47409677	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	47409677	47409677	G	A	SNP	HTR2A	ENST00000378688	human	ensembl	74_37	-1	known	silent	c.711	p.I237	0.035	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT2A_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2A	HGNC	ENSG00000102468				42	0	0	30	37	55.2239
THSD1	0	genome.wustl.edu	37	13	52952250	52952250	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	13	52952250	52952250	T	G	SNP	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	missense	c.1855	p.S619R	0.996	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				59	0	0	67	19	22.093
OR4N2	0	genome.wustl.edu	37	14	20295670	20295670	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	20295670	20295670	A	T	SNP	OR4N2	ENST00000315947	human	ensembl	74_37	+1	known	missense	c.63	p.Q21H	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294				376	0	0	525	44	7.73286
RNF31	0	genome.wustl.edu	37	14	24617255	24617255	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	24617255	24617255	G	A	SNP	RNF31	ENST00000324103	human	ensembl	74_37	+1	known	missense	c.263	p.S88N	0.993	pfam_PUB_domain	pfam_PUB_domain,pfam_Znf_C6HC,superfamily_UBA-like,superfamily_DEATH-like_dom,superfamily_Znf_FYVE_PHD,smart_Znf_RanBP2,smart_Znf_C6HC,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RanBP2	-	no_errors	RNF31	HGNC	ENSG00000092098				67	0	0	7	41	85.4167
PRKD1	0	genome.wustl.edu	37	14	30046521	30046521	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	30046521	30046521	T	G	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.2662	p.S888R	0.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304				51	0	0	14	51	78.4615
AKAP6	0	genome.wustl.edu	37	14	33291387	33291387	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	33291387	33291387	A	C	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	missense	c.4368	p.E1456D	1.000	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320				32	0	0	26	5	16.129
LRFN5	0	genome.wustl.edu	37	14	42360793	42360793	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	42360793	42360793	G	T	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.1726	p.A576S	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379				54	0	0	91	24	20.8696
PTGDR	0	genome.wustl.edu	37	14	52741454	52741454	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	52741454	52741454	C	T	SNP	PTGDR	ENST00000306051	human	ensembl	74_37	+1	known	silent	c.852	p.R284	0.987	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Pglndn_D_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Pglndn_D_rcpt,prints_Prostanoid_rcpt	-	no_errors	PTGDR	HGNC	ENSG00000168229				22	0	0	19	13	40.625
TTLL5	0	genome.wustl.edu	37	14	76238105	76238105	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	76238105	76238105	G	A	SNP	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	missense	c.2044	p.A682T	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685				129	0	0	50	34	40.4762
GPATCH2L	0	genome.wustl.edu	37	14	76621146	76621146	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	76621146	76621146	T	C	SNP	GPATCH2L	ENST00000261530	human	ensembl	74_37	+1	known	missense	c.440	p.L147P	1.000	NULL	NULL	-	no_errors	GPATCH2L	HGNC	ENSG00000089916				32	0	0	29	22	43.1373
C14orf177	0	genome.wustl.edu	37	14	99182660	99182660	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	14	99182660	99182660	T	C	SNP	C14orf177	ENST00000325812	human	ensembl	74_37	+1	known	silent	c.132	p.S44	0.000	NULL	NULL	-	no_errors	C14orf177	HGNC	ENSG00000176605				24	0	0	12	12	50
OR4N4	0	genome.wustl.edu	37	15	22383400	22383400	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	22383400	22383400	G	A	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.928	p.V310M	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706				25	0	0	16	10	38.4615
ZNF770	0	genome.wustl.edu	37	15	35275157	35275157	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	35275157	35275157	T	A	SNP	ZNF770	ENST00000356321	human	ensembl	74_37	-1	known	missense	c.479	p.H160L	0.177	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF770	HGNC	ENSG00000198146				44	0	0	32	24	42.8571
EHD4	0	genome.wustl.edu	37	15	42211597	42211597	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	42211597	42211597	C	A	SNP	EHD4	ENST00000220325	human	ensembl	74_37	-1	known	missense	c.735	p.K245N	0.998	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD4	HGNC	ENSG00000103966				36	0	0	29	14	32.5581
SEMA6D	0	genome.wustl.edu	37	15	48055225	48055225	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	48055225	48055225	T	G	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.671	p.L224R	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				19	0	0	14	10	41.6667
SLC12A1	0	genome.wustl.edu	37	15	48594956	48594956	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	48594956	48594956	C	T	SNP	SLC12A1	ENST00000380993	human	ensembl	74_37	+1	known	silent	c.3174	p.P1058	0.943	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt2,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A1	HGNC	ENSG00000074803				63	0	0	27	22	44.898
GLDN	0	genome.wustl.edu	37	15	51687172	51687172	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	51687172	51687172	C	T	SNP	GLDN	ENST00000335449	human	ensembl	74_37	+1	known	silent	c.682	p.L228	0.000	NULL	pfam_Olfac-like,pfam_Collagen,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	GLDN	HGNC	ENSG00000186417				13	0	0	4	8	66.6667
ZNF280D	0	genome.wustl.edu	37	15	56924164	56924164	+	Silent	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	56924164	56924164	G	T	SNP	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	silent	c.2472	p.I824	0.023	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280D	HGNC	ENSG00000137871				68	0	0	68	45	39.823
RORA	0	genome.wustl.edu	37	15	60919479	60919479	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	60919479	60919479	C	A	SNP	RORA	ENST00000261523	human	ensembl	74_37	-1	known	missense	c.95	p.R32I	0.021	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt	-	no_errors	RORA	HGNC	ENSG00000069667				54	0	0	35	19	35.1852
CSK	0	genome.wustl.edu	37	15	75091247	75091247	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	75091247	75091247	C	T	SNP	CSK	ENST00000220003	human	ensembl	74_37	+1	known	silent	c.210	p.G70	0.593	pfscan_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	CSK	HGNC	ENSG00000103653				48	0	0	28	2	6.66667
ADAMTSL3	0	genome.wustl.edu	37	15	84659886	84659886	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	84659886	84659886	A	C	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.3893	p.H1298P	0.000	pfscan_Ig-like_dom	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218				169	0	0	90	66	42.3077
MESP2	0	genome.wustl.edu	37	15	90321444	90321444	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	15	90321444	90321444	C	A	SNP	MESP2	ENST00000341735	human	ensembl	74_37	+1	known	missense	c.1073	p.P358Q	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MESP2	HGNC	ENSG00000188095				34	0	0	9	10	52.6316
HS3ST2	0	genome.wustl.edu	37	16	22926778	22926778	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	16	22926778	22926778	T	C	SNP	HS3ST2	ENST00000261374	human	ensembl	74_37	+1	known	silent	c.999	p.T333	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST2	HGNC	ENSG00000122254				178	0	0	115	55	32.3529
PRKCB	0	genome.wustl.edu	37	16	24104114	24104114	+	Silent	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	16	24104114	24104114	A	C	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	silent	c.532	p.R178	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501				83	0	0	43	53	55.2083
RAB11FIP3	0	genome.wustl.edu	37	16	511421	511421	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	16	511421	511421	G	C	SNP	RAB11FIP3	ENST00000457159	human	ensembl	74_37	+1	known	missense	c.732	p.K244N	0.947	NULL	pfam_Rab-bd_FIP-RBD,pfscan_EF_hand_dom	-	no_errors	RAB11FIP3	HGNC	ENSG00000090565				130	0	0	50	4	7.40741
FAM86A	0	genome.wustl.edu	37	16	5140541	5140541	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	16	5140541	5140541	G	C	SNP	FAM86A	ENST00000427587	human	ensembl	74_37	-1	known	missense	c.368	p.S123C	0.046	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	FAM86A	HGNC	ENSG00000118894				86	0	0	32	3	8.57143
TMEM231	0	genome.wustl.edu	37	16	75575315	75575315	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	16	75575315	75575315	C	T	SNP	TMEM231	ENST00000568377	human	ensembl	74_37	-1	known	missense	c.790	p.V264M	1.000	pfam_TMEM231	pfam_TMEM231	-	no_errors	TMEM231	HGNC	ENSG00000205084				32	0	0	16	15	48.3871
ADAMTS18	0	genome.wustl.edu	37	16	77334269	77334269	+	Silent	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	16	77334269	77334269	A	T	SNP	ADAMTS18	ENST00000282849	human	ensembl	74_37	-1	known	silent	c.2565	p.A855	0.986	pfam_ADAM_spacer1	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS18	HGNC	ENSG00000140873				51	0	0	55	20	26.6667
MYH4	0	genome.wustl.edu	37	17	10346803	10346803	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	10346803	10346803	G	A	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	silent	c.5709	p.L1903	0.995	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				66	0	0	49	34	40.9639
PMP22	0	genome.wustl.edu	37	17	15134380	15134380	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	15134380	15134380	C	A	SNP	PMP22	ENST00000312280	human	ensembl	74_37	-1	known	missense	c.337	p.A113S	0.898	pfam_PMP22/EMP/MP20/Claudin,prints_PMP22_EMP_MP20	pfam_PMP22/EMP/MP20/Claudin,prints_PMP22,prints_PMP22_EMP_MP20	-	no_errors	PMP22	HGNC	ENSG00000109099				32	0	0	29	3	9.375
ZNF286A	0	genome.wustl.edu	37	17	15619704	15619704	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	15619704	15619704	A	T	SNP	ZNF286A	ENST00000413242	human	ensembl	74_37	+1	known	missense	c.666	p.K222N	0.989	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF286A	HGNC	ENSG00000255104				21	0	0	20	11	35.4839
PIGL	0	genome.wustl.edu	37	17	16221220	16221220	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	16221220	16221220	A	C	SNP	PIGL	ENST00000225609	human	ensembl	74_37	+1	known	missense	c.658	p.K220Q	1.000	superfamily_LmbE-like_dom	pfam_GlcNAc_PI_deacetylase-related,superfamily_LmbE-like_dom	-	no_errors	PIGL	HGNC	ENSG00000108474				73	0	0	6	36	85.7143
WDR81	0	genome.wustl.edu	37	17	1637458	1637458	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	1637458	1637458	G	A	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	silent	c.5127	p.P1709	0.001	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716				35	0	0	23	4	14.8148
SPECC1	0	genome.wustl.edu	37	17	19999988	19999988	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	19999988	19999988	G	A	SNP	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	nonsense	c.24	p.W8*	0.997	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				142	0	0	47	32	40.5063
KCNJ12	0	genome.wustl.edu	37	17	21319358	21319358	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	21319358	21319358	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.704	p.P235L	0.999	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				32	0	0	22	3	12
FAM27L	0	genome.wustl.edu	37	17	21826233	21826233	+	RNA	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	21826233	21826233	G	A	SNP	FAM27L	ENST00000426869	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM27L	HGNC	ENSG00000178130				44	0	0	20	18	47.3684
VTN	0	genome.wustl.edu	37	17	26695926	26695926	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	26695926	26695926	A	G	SNP	VTN	ENST00000226218	human	ensembl	74_37	-1	known	missense	c.793	p.Y265H	1.000	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat	pfam_Hemopexin-like_repeat,pfam_Somatomedin_B_dom,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	VTN	HGNC	ENSG00000109072				94	0	0	61	34	35.7895
TMEM132E	0	genome.wustl.edu	37	17	32953468	32953468	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	32953468	32953468	C	T	SNP	TMEM132E	ENST00000321639	human	ensembl	74_37	+1	known	silent	c.390	p.I130	1.000	NULL	NULL	-	no_errors	TMEM132E	HGNC	ENSG00000181291				19	0	0	16	8	33.3333
OR1E1	0	genome.wustl.edu	37	17	3301149	3301149	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	3301149	3301149	T	G	SNP	OR1E1	ENST00000322608	human	ensembl	74_37	-1	known	missense	c.556	p.K186Q	0.068	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1E1	HGNC	ENSG00000180016				27	0	0	22	24	52.1739
ENSG00000224113	0	genome.wustl.edu	37	17	33332531	33332531	+	RNA	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	33332531	33332531	T	C	SNP	ENSG00000224113	ENST00000415412	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RP5-837J1.2	Clone_based_vega_gene	ENSG00000224113				36	0	0	30	16	34.7826
AP2B1	0	genome.wustl.edu	37	17	33951554	33951554	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	33951554	33951554	A	T	SNP	AP2B1	ENST00000312678	human	ensembl	74_37	+1	known	missense	c.664	p.I222F	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP2B1	HGNC	ENSG00000006125				57	0	0	54	31	36.4706
TRPV1	0	genome.wustl.edu	37	17	3495503	3495503	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	3495503	3495503	G	A	SNP	TRPV1	ENST00000399756	human	ensembl	74_37	-1	known	missense	c.142	p.R48W	0.712	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV1	HGNC	ENSG00000196689				20	0	0	2	6	75
GSG2	0	genome.wustl.edu	37	17	3628131	3628131	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	3628131	3628131	A	T	SNP	GSG2	ENST00000325418	human	ensembl	74_37	+1	known	missense	c.902	p.Q301L	0.000	NULL	pfam_DUF3635,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	GSG2	HGNC	ENSG00000177602				57	0	0	46	3	6.12245
KCNH4	0	genome.wustl.edu	37	17	40315668	40315668	+	Silent	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	40315668	40315668	G	C	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	silent	c.2433	p.L811	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558				20	0	0	9	7	43.75
UBE2Z	0	genome.wustl.edu	37	17	46998578	46998578	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	46998578	46998578	C	G	SNP	UBE2Z	ENST00000360943	human	ensembl	74_37	+1	known	missense	c.747	p.I249M	1.000	superfamily_UBQ-conjugating_enzyme/RWD	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2Z	HGNC	ENSG00000159202				26	0	0	17	4	19.0476
CACNA1G	0	genome.wustl.edu	37	17	48646631	48646631	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	48646631	48646631	C	T	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	missense	c.460	p.R154W	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283				67	0	0	55	16	22.5352
TLK2	0	genome.wustl.edu	37	17	60637416	60637416	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	60637416	60637416	A	C	SNP	TLK2	ENST00000326270	human	ensembl	74_37	+1	known	missense	c.760	p.K254Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TLK2	HGNC	ENSG00000146872				44	0	0	40	15	27.2727
C17orf74	0	genome.wustl.edu	37	17	7330106	7330106	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	7330106	7330106	C	T	SNP	C17orf74	ENST00000333870	human	ensembl	74_37	+1	known	nonsense	c.796	p.R266*	0.085	NULL	NULL	-	no_errors	C17orf74	HGNC	ENSG00000184560				33	0	0	23	9	28.125
EVPL	0	genome.wustl.edu	37	17	74006521	74006521	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	74006521	74006521	T	A	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	missense	c.2765	p.E922V	1.000	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880				36	0	0	19	8	29.6296
MGAT5B	0	genome.wustl.edu	37	17	74942478	74942478	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	74942478	74942478	C	T	SNP	MGAT5B	ENST00000428789	human	ensembl	74_37	+1	known	silent	c.1896	p.Y632	0.986	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MGAT5B	HGNC	ENSG00000167889				39	0	0	16	3	15.7895
RCVRN	0	genome.wustl.edu	37	17	9808171	9808171	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	9808171	9808171	G	A	SNP	RCVRN	ENST00000226193	human	ensembl	74_37	-1	known	silent	c.327	p.Y109	0.998	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	RCVRN	HGNC	ENSG00000109047				120	0	0	49	25	33.7838
CXADRP3	0	genome.wustl.edu	37	18	14478666	14478666	+	RNA	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	14478666	14478666	T	G	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.488	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766				20	0	0	32	15	31.9149
LAMA3	0	genome.wustl.edu	37	18	21357584	21357584	+	Splice_Site	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	21357584	21357584	G	T	SNP	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	splice_site	c.1468+1	e11+1	1.000	-	-	-	no_errors	LAMA3	HGNC	ENSG00000053747				43	0	0	59	9	13.2353
RIT2	0	genome.wustl.edu	37	18	40323528	40323528	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	40323528	40323528	A	C	SNP	RIT2	ENST00000326695	human	ensembl	74_37	-1	known	missense	c.584	p.L195R	1.000	smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RIT2	HGNC	ENSG00000152214				68	0	0	82	24	22.6415
PIAS2	0	genome.wustl.edu	37	18	44470842	44470842	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	44470842	44470842	C	T	SNP	PIAS2	ENST00000585916	human	ensembl	74_37	-1	known	missense	c.200	p.R67Q	0.996	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS2	HGNC	ENSG00000078043				70	0	0	72	32	30.7692
MYO5B	0	genome.wustl.edu	37	18	47363930	47363930	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	47363930	47363930	A	G	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	silent	c.5095	p.L1699	1.000	pfam_Dil_domain,pfscan_Dilute	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306				30	0	0	53	5	8.62069
CCDC102B	0	genome.wustl.edu	37	18	66678349	66678349	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	66678349	66678349	T	G	SNP	CCDC102B	ENST00000584156	human	ensembl	74_37	+1	known	missense	c.1442	p.L481R	0.001	NULL	NULL	-	no_errors	CCDC102B	HGNC	ENSG00000150636				40	0	0	15	31	67.3913
LAMA1	0	genome.wustl.edu	37	18	6943298	6943298	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	6943298	6943298	T	G	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.8948	p.N2983T	0.903	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				59	0	0	48	66	57.8947
LAMA1	0	genome.wustl.edu	37	18	7034595	7034595	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	7034595	7034595	A	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.1934	p.F645Y	1.000	pfam_Laminin_B_type_IV,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				61	0	0	39	54	58.0645
COL5A3	0	genome.wustl.edu	37	19	10071440	10071440	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	10071440	10071440	C	A	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	nonsense	c.4978	p.E1660*	0.449	pfam_Fib_collagen_C,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573				70	0	0	42	27	39.1304
ELAVL3	0	genome.wustl.edu	37	19	11577597	11577597	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	11577597	11577597	C	T	SNP	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	missense	c.55	p.G19S	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361				25	0	0	13	5	27.7778
CILP2	0	genome.wustl.edu	37	19	19655402	19655402	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	19655402	19655402	C	T	SNP	CILP2	ENST00000291495	human	ensembl	74_37	+1	known	missense	c.2048	p.S683L	1.000	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP2	HGNC	ENSG00000160161				18	0	0	10	5	33.3333
ZNF626	0	genome.wustl.edu	37	19	20808024	20808024	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	20808024	20808024	T	G	SNP	ZNF626	ENST00000601440	human	ensembl	74_37	-1	known	missense	c.659	p.K220T	0.714	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF626	HGNC	ENSG00000188171				48	0	0	29	18	38.2979
ZNF85	0	genome.wustl.edu	37	19	21117821	21117821	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	21117821	21117821	A	C	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	missense	c.197	p.K66T	0.050	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750				40	0	0	15	8	34.7826
ZNF99	0	genome.wustl.edu	37	19	22941160	22941160	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	22941160	22941160	A	G	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	silent	c.1278	p.A426	0.390	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973				50	0	0	23	14	37.8378
ZNF724P	0	genome.wustl.edu	37	19	23405457	23405457	+	Silent	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	23405457	23405457	T	G	SNP	ZNF724P	ENST00000418100	human	ensembl	74_37	-1	novel	silent	c.1590	p.G530	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF724P	HGNC	ENSG00000196081				51	0	0	41	3	6.81818
LRFN3	0	genome.wustl.edu	37	19	36430970	36430970	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	36430970	36430970	C	T	SNP	LRFN3	ENST00000246529	human	ensembl	74_37	+1	known	missense	c.643	p.R215C	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN3	HGNC	ENSG00000126243				248	0	0	364	46	11.2195
WDR62	0	genome.wustl.edu	37	19	36583682	36583682	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	36583682	36583682	A	G	SNP	WDR62	ENST00000401500	human	ensembl	74_37	+1	known	missense	c.2302	p.T768A	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702				131	0	0	185	26	12.3223
ZNF529	0	genome.wustl.edu	37	19	37037814	37037814	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	37037814	37037814	A	G	SNP	ZNF529	ENST00000591340	human	ensembl	74_37	-1	known	missense	c.1646	p.L549P	0.057	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF529	HGNC	ENSG00000186020				56	0	0	139	22	13.6646
ZNF382	0	genome.wustl.edu	37	19	37117657	37117657	+	Silent	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	37117657	37117657	T	G	SNP	ZNF382	ENST00000292928	human	ensembl	74_37	+1	known	silent	c.858	p.P286	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF382	HGNC	ENSG00000161298				109	0	0	297	40	11.8694
RYR1	0	genome.wustl.edu	37	19	38966081	38966081	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	38966081	38966081	C	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	silent	c.4284	p.N1428	1.000	pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				25	0	0	64	5	7.24638
PAF1	0	genome.wustl.edu	37	19	39876874	39876874	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	39876874	39876874	C	T	SNP	PAF1	ENST00000221265	human	ensembl	74_37	-1	known	silent	c.1353	p.E451	1.000	NULL	pfam_RNA_pol_II-assoc_Paf1	-	no_errors	PAF1	HGNC	ENSG00000006712				107	0	0	240	53	18.0887
TIMM50	0	genome.wustl.edu	37	19	39980387	39980387	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	39980387	39980387	C	T	SNP	TIMM50	ENST00000314349	human	ensembl	74_37	+1	known	missense	c.1298	p.S433F	1.000	NULL	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF	-	no_errors	TIMM50	HGNC	ENSG00000105197				14	0	0	21	14	40
FCGBP	0	genome.wustl.edu	37	19	40392045	40392045	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	40392045	40392045	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.8341	p.V2781M	0.301	pfam_TIL_dom,superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				42	0	0	95	12	11.215
FCGBP	0	genome.wustl.edu	37	19	40433051	40433051	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	40433051	40433051	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	silent	c.1218	p.T406	0.010	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				38	0	0	76	10	11.6279
GRIK5	0	genome.wustl.edu	37	19	42509893	42509893	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	42509893	42509893	C	T	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	missense	c.2245	p.G749S	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737				23	0	0	14	4	22.2222
BCAM	0	genome.wustl.edu	37	19	45321843	45321843	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	45321843	45321843	C	T	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	silent	c.1143	p.V381	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244				32	0	0	24	15	38.4615
TEAD2	0	genome.wustl.edu	37	19	49845738	49845738	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	49845738	49845738	C	T	SNP	TEAD2	ENST00000311227	human	ensembl	74_37	-1	known	missense	c.1187	p.R396Q	1.000	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD2	HGNC	ENSG00000074219				62	0	0	49	21	30
ZNF577	0	genome.wustl.edu	37	19	52376330	52376330	+	Silent	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	52376330	52376330	T	G	SNP	ZNF577	ENST00000301399	human	ensembl	74_37	-1	known	silent	c.913	p.R305	0.922	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF577	HGNC	ENSG00000161551				74	0	0	44	50	53.1915
VN1R4	0	genome.wustl.edu	37	19	53770759	53770759	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	53770759	53770759	A	C	SNP	VN1R4	ENST00000311170	human	ensembl	74_37	-1	known	missense	c.160	p.F54V	0.281	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R4	HGNC	ENSG00000228567				37	0	0	48	7	12.7273
ENSG00000227407	0	genome.wustl.edu	37	19	54942266	54942266	+	RNA	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	54942266	54942266	T	G	SNP	ENSG00000227407	ENST00000457113	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	AC008746.3	Clone_based_vega_gene	ENSG00000227407				78	0	0	43	9	17.3077
ZNF835	0	genome.wustl.edu	37	19	57175393	57175393	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	57175393	57175393	A	T	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	missense	c.1174	p.C392S	0.958	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				34	0	0	21	23	52.2727
ZNF814	0	genome.wustl.edu	37	19	58385546	58385546	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	58385546	58385546	G	T	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	missense	c.1212	p.D404E	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514				12	0	0	29	5	14.7059
CERS4	0	genome.wustl.edu	37	19	8326872	8326872	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	8326872	8326872	C	T	SNP	CERS4	ENST00000251363	human	ensembl	74_37	+1	known	missense	c.1064	p.A355V	0.000	pirsf_Longevity_assurance_LAG1_LAC1	pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS4	HGNC	ENSG00000090661				39	0	0	12	10	45.4545
OR7E24	0	genome.wustl.edu	37	19	9362443	9362443	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	19	9362443	9362443	C	T	SNP	OR7E24	ENST00000456448	human	ensembl	74_37	+1	known	missense	c.724	p.P242S	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7E24	HGNC	ENSG00000237521				9	0	0	12	4	25
AFF3	0	genome.wustl.edu	37	2	100368730	100368730	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	100368730	100368730	G	A	SNP	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	nonsense	c.1030	p.Q344*	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218				49	0	0	14	13	48.1481
KLF11	0	genome.wustl.edu	37	2	10188508	10188508	+	Silent	SNP	C	C	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	10188508	10188508	C	G	SNP	KLF11	ENST00000305883	human	ensembl	74_37	+1	known	silent	c.1044	p.L348	0.119	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF11	HGNC	ENSG00000172059				74	0	0	74	4	5.12821
RGPD4	0	genome.wustl.edu	37	2	108488148	108488148	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	108488148	108488148	G	A	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	missense	c.3688	p.G1230S	0.009	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862				134	0	0	38	167	81.4634
RANBP2	0	genome.wustl.edu	37	2	109347834	109347834	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	109347834	109347834	G	A	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	silent	c.309	p.L103	1.000	pfscan_TPR-contain_dom	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				94	0	0	63	54	46.1538
RANBP2	0	genome.wustl.edu	37	2	109356991	109356991	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	109356991	109356991	G	A	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.829	p.E277K	1.000	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				245	0	0	42	235	84.8375
POTEE	0	genome.wustl.edu	37	2	131985873	131985873	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	131985873	131985873	T	C	SNP	POTEE	ENST00000356920	human	ensembl	74_37	+1	known	missense	c.974	p.L325P	0.167	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEE	HGNC	ENSG00000188219				30	0	0	49	10	16.9492
CCDC74A	0	genome.wustl.edu	37	2	132290251	132290251	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	132290251	132290251	C	T	SNP	CCDC74A	ENST00000295171	human	ensembl	74_37	+1	known	missense	c.773	p.P258L	0.029	NULL	NULL	-	no_errors	CCDC74A	HGNC	ENSG00000163040				100	0	0	74	4	5.12821
MCM6	0	genome.wustl.edu	37	2	136626249	136626249	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	136626249	136626249	G	A	SNP	MCM6	ENST00000264156	human	ensembl	74_37	-1	known	missense	c.547	p.P183S	1.000	superfamily_NA-bd_OB-fold,smart_MCM_DNA-dep_ATPase,prints_MCM6	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM6,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM6	HGNC	ENSG00000076003				72	0	0	53	24	31.1688
THSD7B	0	genome.wustl.edu	37	2	138320844	138320844	+	Silent	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	138320844	138320844	A	G	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	silent	c.3201	p.V1067	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229				19	0	0	15	7	31.8182
LRP1B	0	genome.wustl.edu	37	2	141598520	141598520	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	141598520	141598520	T	G	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.5081	p.K1694T	1.000	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				42	0	0	30	35	53.8462
SCN2A	0	genome.wustl.edu	37	2	166210751	166210751	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	166210751	166210751	A	C	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.2969	p.N990T	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531				167	0	0	134	75	35.8852
CSRNP3	0	genome.wustl.edu	37	2	166535567	166535567	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	166535567	166535567	C	T	SNP	CSRNP3	ENST00000314499	human	ensembl	74_37	+1	known	silent	c.1062	p.S354	0.746	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP3	HGNC	ENSG00000178662				91	0	0	34	26	43.3333
XIRP2	0	genome.wustl.edu	37	2	168115844	168115844	+	Silent	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	168115844	168115844	A	C	SNP	XIRP2	ENST00000420519	human	ensembl	74_37	+1	known	silent	c.2887	p.R963	1.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	XIRP2	HGNC	ENSG00000163092				38	0	0	26	11	29.7297
TTN	0	genome.wustl.edu	37	2	179431873	179431873	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	179431873	179431873	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.71282	p.T23761S	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				66	0	0	51	41	44.5652
TTN	0	genome.wustl.edu	37	2	179498022	179498022	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	179498022	179498022	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.35274	p.Y11758	0.997	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				83	0	0	56	44	44
TTN	0	genome.wustl.edu	37	2	179544122	179544122	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	179544122	179544122	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.29954	p.P9985Q	1.000	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				41	0	0	35	15	30
TTN	0	genome.wustl.edu	37	2	179560121	179560121	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	179560121	179560121	T	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.27492	p.K9164N	0.991	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				71	0	0	38	22	36.6667
TTN	0	genome.wustl.edu	37	2	179593353	179593353	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	179593353	179593353	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.15568	p.S5190G	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				19	0	0	14	15	51.7241
KCTD18	0	genome.wustl.edu	37	2	201363767	201363767	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	201363767	201363767	T	C	SNP	KCTD18	ENST00000359878	human	ensembl	74_37	-1	known	missense	c.413	p.N138S	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD18	HGNC	ENSG00000155729				36	0	0	22	38	63.3333
INO80D	0	genome.wustl.edu	37	2	206927685	206927685	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	206927685	206927685	G	A	SNP	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	missense	c.56	p.S19L	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933				21	0	0	11	5	31.25
MAP2	0	genome.wustl.edu	37	2	210574735	210574735	+	Silent	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	210574735	210574735	T	A	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	silent	c.4830	p.S1610	1.000	NULL	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				76	0	0	41	33	44.5946
CPS1	0	genome.wustl.edu	37	2	211465397	211465397	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	211465397	211465397	G	A	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	silent	c.1686	p.E562	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfscan_ATP-grasp,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826				103	0	0	58	27	31.7647
UGT1A4	0	genome.wustl.edu	37	2	234681146	234681146	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	234681146	234681146	C	T	SNP	UGT1A4	ENST00000373409	human	ensembl	74_37	+1	known	missense	c.1546	p.R516W	0.109	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474				33	0	0	23	20	46.5116
TTC27	0	genome.wustl.edu	37	2	33036126	33036126	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	33036126	33036126	G	A	SNP	TTC27	ENST00000317907	human	ensembl	74_37	+1	known	silent	c.2034	p.G678	0.665	NULL	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC27	HGNC	ENSG00000018699				67	0	0	37	21	36.2069
SLC8A1	0	genome.wustl.edu	37	2	40657171	40657171	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	40657171	40657171	C	A	SNP	SLC8A1	ENST00000332839	human	ensembl	74_37	-1	known	missense	c.250	p.A84S	1.000	tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,pfscan_DnaJ_domain,prints_Na_Ca_Ex,prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A1	HGNC	ENSG00000183023				52	0	0	66	40	37.7358
REG3G	0	genome.wustl.edu	37	2	79255359	79255359	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	79255359	79255359	A	C	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.485	p.N162T	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954				51	0	0	25	13	34.2105
LYG2	0	genome.wustl.edu	37	2	99860569	99860569	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	2	99860569	99860569	G	A	SNP	LYG2	ENST00000333017	human	ensembl	74_37	-1	known	missense	c.413	p.A138V	0.997	pfam_TGlycosylase-like_SLT,superfamily_Lysozyme-like_dom,pirsf_Glyco_hydro_23,prints_Glyco_hydro_23	pfam_TGlycosylase-like_SLT,superfamily_Lysozyme-like_dom,pirsf_Glyco_hydro_23,prints_Glyco_hydro_23	-	no_errors	LYG2	HGNC	ENSG00000185674				45	0	0	24	24	50
PAX1	0	genome.wustl.edu	37	20	21687617	21687617	+	Silent	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	21687617	21687617	G	C	SNP	PAX1	ENST00000398485	human	ensembl	74_37	+1	known	silent	c.828	p.T276	0.136	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX1	HGNC	ENSG00000125813				41	0	0	64	4	5.88235
PYGB	0	genome.wustl.edu	37	20	25276278	25276278	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	25276278	25276278	G	A	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	missense	c.2351	p.C784Y	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994				69	0	0	107	19	15.0794
FAM83C	0	genome.wustl.edu	37	20	33874645	33874645	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	33874645	33874645	C	A	SNP	FAM83C	ENST00000374408	human	ensembl	74_37	-1	known	missense	c.1937	p.G646V	0.563	NULL	pfam_DUF1669	-	no_errors	FAM83C	HGNC	ENSG00000125998				37	0	0	72	15	17.2414
CHD6	0	genome.wustl.edu	37	20	40049347	40049347	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	40049347	40049347	G	A	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	silent	c.5928	p.A1976	0.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				114	0	0	298	38	11.3095
CHD6	0	genome.wustl.edu	37	20	40049356	40049356	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	40049356	40049356	A	C	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.5919	p.N1973K	0.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				116	0	0	314	48	13.2597
MMP9	0	genome.wustl.edu	37	20	44639165	44639165	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	44639165	44639165	G	A	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	missense	c.415	p.D139N	1.000	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				48	0	0	101	11	9.82143
PROKR2	0	genome.wustl.edu	37	20	5282999	5282999	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	5282999	5282999	A	C	SNP	PROKR2	ENST00000217270	human	ensembl	74_37	-1	known	missense	c.842	p.L281R	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PROKR2	HGNC	ENSG00000101292				34	0	0	80	23	22.3301
PTK6	0	genome.wustl.edu	37	20	62166342	62166342	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	20	62166342	62166342	C	T	SNP	PTK6	ENST00000217185	human	ensembl	74_37	-1	known	missense	c.301	p.A101T	0.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	PTK6	HGNC	ENSG00000101213				21	0	0	28	3	9.67742
TPTE	0	genome.wustl.edu	37	21	10908834	10908834	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	21	10908834	10908834	T	A	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.1511	p.E504V	0.487	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				22	0	0	33	18	35.2941
TPTE	0	genome.wustl.edu	37	21	10934995	10934995	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	21	10934995	10934995	T	C	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	silent	c.798	p.E266	1.000	pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				71	0	0	123	13	9.55882
TPTE	0	genome.wustl.edu	37	21	10971302	10971302	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	21	10971302	10971302	G	A	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.55	p.P19S	0.000	NULL	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				46	0	0	34	7	17.0732
BAGE2	0	genome.wustl.edu	37	21	11058248	11058248	+	RNA	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	21	11058248	11058248	G	A	SNP	BAGE2	ENST00000470054	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BAGE2	HGNC	ENSG00000187172				91	0	0	123	7	5.38462
TRPM2	0	genome.wustl.edu	37	21	45820246	45820246	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	21	45820246	45820246	C	T	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	silent	c.2313	p.I771	1.000	NULL	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				33	0	0	13	7	35
PCBP3	0	genome.wustl.edu	37	21	47321018	47321018	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	21	47321018	47321018	G	C	SNP	PCBP3	ENST00000400314	human	ensembl	74_37	+1	known	missense	c.330	p.K110N	1.000	smart_KH_dom	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP3	HGNC	ENSG00000183570				50	0	0	32	14	30.4348
PRAME	0	genome.wustl.edu	37	22	22891014	22891014	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	22	22891014	22891014	C	T	SNP	PRAME	ENST00000398741	human	ensembl	74_37	-1	known	silent	c.1005	p.S335	0.000	NULL	NULL	-	no_errors	PRAME	HGNC	ENSG00000185686				145	0	0	112	33	22.7586
ZNF70	0	genome.wustl.edu	37	22	24087318	24087318	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	22	24087318	24087318	G	A	SNP	ZNF70	ENST00000341976	human	ensembl	74_37	-1	known	missense	c.10	p.P4S	0.036	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF70	HGNC	ENSG00000187792				76	0	0	94	9	8.73786
FAM211B	0	genome.wustl.edu	37	22	24985869	24985869	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	22	24985869	24985869	C	T	SNP	FAM211B	ENST00000318753	human	ensembl	74_37	-1	known	missense	c.226	p.V76M	0.995	NULL	NULL	-	no_errors	FAM211B	HGNC	ENSG00000178026				15	0	0	10	3	23.0769
LNP1	0	genome.wustl.edu	37	3	100170656	100170656	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	100170656	100170656	G	A	SNP	LNP1	ENST00000383693	human	ensembl	74_37	+1	known	missense	c.250	p.D84N	0.000	NULL	NULL	-	no_errors	LNP1	HGNC	ENSG00000206535				58	0	0	36	45	55.5556
CD200R1L	0	genome.wustl.edu	37	3	112548191	112548191	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	112548191	112548191	C	A	SNP	CD200R1L	ENST00000398214	human	ensembl	74_37	-1	known	missense	c.87	p.Q29H	0.004	NULL	pfam_CD80_C2-set,pfscan_Ig-like_dom	-	no_errors	CD200R1L	HGNC	ENSG00000206531				49	0	0	36	23	38.9831
CASR	0	genome.wustl.edu	37	3	121981057	121981057	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	121981057	121981057	G	A	SNP	CASR	ENST00000498619	human	ensembl	74_37	+1	known	missense	c.1175	p.R392Q	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	CASR	HGNC	ENSG00000036828				57	0	0	22	32	59.2593
P2RY13	0	genome.wustl.edu	37	3	151046346	151046346	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	151046346	151046346	G	A	SNP	P2RY13	ENST00000325602	human	ensembl	74_37	-1	known	silent	c.498	p.F166	0.003	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_P2Y13_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_P2Y13_rcpt,prints_GPCR_Rhodpsn,prints_P2Y14_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	P2RY13	HGNC	ENSG00000181631				46	0	0	28	39	58.209
GHSR	0	genome.wustl.edu	37	3	172165990	172165990	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	172165990	172165990	G	A	SNP	GHSR	ENST00000241256	human	ensembl	74_37	-1	known	missense	c.214	p.R72C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GHS-R,prints_GPCR_Rhodpsn	-	no_errors	GHSR	HGNC	ENSG00000121853				39	0	0	21	21	50
NLGN1	0	genome.wustl.edu	37	3	173997382	173997382	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	173997382	173997382	A	T	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.1711	p.N571Y	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760				55	0	0	37	19	33.9286
NAALADL2	0	genome.wustl.edu	37	3	174814991	174814991	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	174814991	174814991	C	T	SNP	NAALADL2	ENST00000454872	human	ensembl	74_37	+1	known	missense	c.455	p.S152L	0.899	NULL	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694				84	0	0	69	45	39.4737
IL1RAP	0	genome.wustl.edu	37	3	190366294	190366294	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	190366294	190366294	G	A	SNP	IL1RAP	ENST00000072516	human	ensembl	74_37	+1	known	missense	c.1513	p.A505T	1.000	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL1RAP	HGNC	ENSG00000196083				86	0	0	83	25	23.1481
ARPP21	0	genome.wustl.edu	37	3	35835432	35835432	+	Silent	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	35835432	35835432	T	A	SNP	ARPP21	ENST00000417925	human	ensembl	74_37	+1	known	silent	c.2424	p.G808	0.992	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	ARPP21	HGNC	ENSG00000172995				20	0	0	13	16	55.1724
NISCH	0	genome.wustl.edu	37	3	52521668	52521668	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	52521668	52521668	C	T	SNP	NISCH	ENST00000345716	human	ensembl	74_37	+1	known	silent	c.2160	p.G720	1.000	NULL	pfam_Phox,pfam_Leu-rich_rpt,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	NISCH	HGNC	ENSG00000010322				37	0	0	20	33	62.2642
GRM7	0	genome.wustl.edu	37	3	6903438	6903438	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	6903438	6903438	T	C	SNP	GRM7	ENST00000402647	human	ensembl	74_37	+1	known	silent	c.363	p.T121	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277				38	0	0	36	14	28
EPHA3	0	genome.wustl.edu	37	3	89468410	89468410	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	3	89468410	89468410	T	C	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	silent	c.1944	p.I648	0.998	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				65	0	0	27	44	61.9718
MTTP	0	genome.wustl.edu	37	4	100528022	100528022	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	100528022	100528022	A	G	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	missense	c.1462	p.S488G	0.114	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823				27	0	0	24	15	38.4615
H2AFZ	0	genome.wustl.edu	37	4	100870839	100870839	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	100870839	100870839	G	A	SNP	H2AFZ	ENST00000296417	human	ensembl	74_37	-1	known	missense	c.62	p.S21L	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	H2AFZ	HGNC	ENSG00000164032				111	0	0	50	28	35.8974
ENSG00000251577	0	genome.wustl.edu	37	4	104512559	104512559	+	RNA	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	104512559	104512559	T	G	SNP	ENSG00000251577	ENST00000502936	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-297P16.3	Clone_based_vega_gene	ENSG00000251577				8	0	0	13	15	53.5714
NDST3	0	genome.wustl.edu	37	4	119158338	119158338	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	119158338	119158338	T	G	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.2081	p.L694R	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				53	0	0	19	14	42.4242
PDGFC	0	genome.wustl.edu	37	4	157732094	157732094	+	Silent	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	157732094	157732094	T	A	SNP	PDGFC	ENST00000502773	human	ensembl	74_37	-1	known	silent	c.390	p.P130	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_PDGF/VEGF_dom,superfamily_CUB_dom,smart_CUB_dom,smart_PDGF/VEGF_dom,pfscan_CUB_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFC	HGNC	ENSG00000145431				42	0	0	42	23	35.3846
GRIA2	0	genome.wustl.edu	37	4	158282799	158282799	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	158282799	158282799	A	C	SNP	GRIA2	ENST00000296526	human	ensembl	74_37	+1	known	missense	c.2401	p.S801R	1.000	pfam_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA2	HGNC	ENSG00000120251				33	0	0	30	18	37.5
SPOCK3	0	genome.wustl.edu	37	4	167675653	167675653	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	167675653	167675653	T	A	SNP	SPOCK3	ENST00000512648	human	ensembl	74_37	-1	putative	nonsense	c.937	p.R313*	0.992	NULL	pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPOCK3	HGNC	ENSG00000196104				35	0	0	29	24	45.283
CLRN2	0	genome.wustl.edu	37	4	17528460	17528460	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	17528460	17528460	A	G	SNP	CLRN2	ENST00000511148	human	ensembl	74_37	+1	known	missense	c.454	p.I152V	0.933	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin	-	no_errors	CLRN2	HGNC	ENSG00000249581				43	0	0	11	12	52.1739
VEGFC	0	genome.wustl.edu	37	4	177713384	177713384	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	177713384	177713384	C	T	SNP	VEGFC	ENST00000280193	human	ensembl	74_37	-1	known	missense	c.82	p.A28T	0.998	NULL	pfam_PDGF/VEGF_dom,pfam_CXCXC_repeat,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	VEGFC	HGNC	ENSG00000150630				11	0	0	5	7	58.3333
AGA	0	genome.wustl.edu	37	4	178363527	178363527	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	178363527	178363527	C	T	SNP	AGA	ENST00000264595	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	0.376	NULL	pfam_Peptidase_T2	-	no_errors	AGA	HGNC	ENSG00000038002				39	0	0	18	14	43.75
TENM3	0	genome.wustl.edu	37	4	183601767	183601767	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	183601767	183601767	A	G	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.1711	p.K571E	1.000	smart_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				45	0	0	18	16	47.0588
WHSC1	0	genome.wustl.edu	37	4	1980505	1980505	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	1980505	1980505	T	C	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	missense	c.3967	p.C1323R	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685				38	0	0	10	18	64.2857
KLB	0	genome.wustl.edu	37	4	39439358	39439358	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	39439358	39439358	G	A	SNP	KLB	ENST00000257408	human	ensembl	74_37	+1	known	missense	c.1348	p.D450N	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KLB	HGNC	ENSG00000134962				157	0	0	55	33	37.5
NPFFR2	0	genome.wustl.edu	37	4	73012916	73012916	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	73012916	73012916	A	G	SNP	NPFFR2	ENST00000308744	human	ensembl	74_37	+1	known	missense	c.956	p.K319R	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPFF_rcpt_2,prints_NPFF_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPFFR2	HGNC	ENSG00000056291				33	0	0	35	29	45.3125
FAM47E-STBD1	0	genome.wustl.edu	37	4	77230709	77230709	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	77230709	77230709	T	C	SNP	FAM47E-STBD1	ENST00000237642	human	ensembl	74_37	+1	known	silent	c.633	p.S211	0.089	NULL	pfam_CBM_fam20,superfamily_Carb-bd-like_fold,pfscan_CBM_fam20	-	no_errors	FAM47E-STBD1	HGNC	ENSG00000118804				37	0	0	26	13	33.3333
PTPN13	0	genome.wustl.edu	37	4	87687620	87687620	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	4	87687620	87687620	G	T	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	nonsense	c.4294	p.E1432*	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				13	0	0	4	3	42.8571
CTNND2	0	genome.wustl.edu	37	5	11411757	11411757	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	11411757	11411757	T	G	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	missense	c.330	p.Q110H	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862				17	0	0	27	19	41.3043
IL4	0	genome.wustl.edu	37	5	132010172	132010172	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	132010172	132010172	G	A	SNP	IL4	ENST00000231449	human	ensembl	74_37	+1	known	missense	c.157	p.V53I	0.002	pfam_IL-4,superfamily_4_helix_cytokine-like_core,smart_IL-4/IL-13,pirsf_IL-4,prints_IL-4	pfam_IL-4,superfamily_4_helix_cytokine-like_core,smart_IL-4/IL-13,pirsf_IL-4,prints_IL-4	-	no_errors	IL4	HGNC	ENSG00000113520				49	0	0	45	3	6.25
PCDHB3	0	genome.wustl.edu	37	5	140481367	140481367	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	140481367	140481367	C	T	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	silent	c.1134	p.N378	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205				49	0	0	38	21	35.5932
ENSG00000255622	0	genome.wustl.edu	37	5	140536790	140536790	+	Nonsense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	140536790	140536790	T	G	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	nonsense	c.1214	p.L405*	0.679	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622				19	0	0	19	13	40.625
FCHSD1	0	genome.wustl.edu	37	5	141026260	141026260	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	141026260	141026260	G	A	SNP	FCHSD1	ENST00000435817	human	ensembl	74_37	-1	known	silent	c.954	p.G318	0.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FCHSD1	HGNC	ENSG00000197948				35	0	0	13	9	40.9091
FBXL7	0	genome.wustl.edu	37	5	15937126	15937126	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	15937126	15937126	A	G	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	missense	c.1307	p.K436R	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580				33	0	0	12	22	64.7059
GABRA6	0	genome.wustl.edu	37	5	161113263	161113263	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	161113263	161113263	A	C	SNP	GABRA6	ENST00000274545	human	ensembl	74_37	+1	known	missense	c.66	p.E22D	0.001	prints_GABBAa6_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863				52	0	0	40	24	37.5
MYO10	0	genome.wustl.edu	37	5	16671582	16671582	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	16671582	16671582	G	A	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	silent	c.5379	p.D1793	1.000	superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				21	0	0	31	15	32.6087
LOC202181	0	genome.wustl.edu	37	5	177059531	177059531	+	RNA	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	177059531	177059531	C	T	SNP	LOC202181	ENST00000515045	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	RP11-1277A3.2	Clone_based_vega_gene	ENSG00000246596				77	0	0	25	29	53.7037
GUSBP1	0	genome.wustl.edu	37	5	21459614	21459614	+	RNA	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	21459614	21459614	G	A	SNP	GUSBP1	ENST00000509649	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GUSBP1	HGNC	ENSG00000183666				105	0	0	33	43	56.5789
PARP8	0	genome.wustl.edu	37	5	50117139	50117139	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	50117139	50117139	T	C	SNP	PARP8	ENST00000281631	human	ensembl	74_37	+1	known	silent	c.1761	p.P587	0.992	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP8	HGNC	ENSG00000151883				56	0	0	8	31	79.4872
ELOVL2	0	genome.wustl.edu	37	6	10995345	10995345	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	10995345	10995345	C	T	SNP	ELOVL2	ENST00000354666	human	ensembl	74_37	-1	known	missense	c.400	p.V134I	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL2	HGNC	ENSG00000197977				75	0	0	42	27	39.1304
RFPL4B	0	genome.wustl.edu	37	6	112671377	112671377	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	112671377	112671377	A	C	SNP	RFPL4B	ENST00000441065	human	ensembl	74_37	+1	known	missense	c.467	p.K156T	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL4B	HGNC	ENSG00000251258				64	0	0	32	18	36
ROS1	0	genome.wustl.edu	37	6	117710930	117710930	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	117710930	117710930	G	C	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	missense	c.1342	p.R448G	0.067	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				38	0	0	29	17	36.9565
MYB	0	genome.wustl.edu	37	6	135539112	135539112	+	Silent	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	135539112	135539112	C	A	SNP	MYB	ENST00000341911	human	ensembl	74_37	+1	known	silent	c.2280	p.V760	1.000	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513				43	0	0	24	20	45.4545
KATNA1	0	genome.wustl.edu	37	6	149916259	149916259	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	149916259	149916259	C	T	SNP	KATNA1	ENST00000335647	human	ensembl	74_37	-1	known	silent	c.1389	p.E463	1.000	pfam_Vps4_C,superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNA1	HGNC	ENSG00000186625				62	0	0	26	18	40.9091
TIAM2	0	genome.wustl.edu	37	6	155465823	155465823	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	155465823	155465823	G	A	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	missense	c.1714	p.D572N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426				56	0	0	30	28	48.2759
TIAM2	0	genome.wustl.edu	37	6	155485683	155485683	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	155485683	155485683	G	A	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	silent	c.2163	p.K721	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426				128	0	0	51	35	40.6977
PNLDC1	0	genome.wustl.edu	37	6	160225002	160225002	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	160225002	160225002	T	G	SNP	PNLDC1	ENST00000610273	human	ensembl	74_37	+1	known	missense	c.221	p.I74R	0.944	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	PNLDC1	HGNC	ENSG00000146453				100	0	0	63	36	36.3636
MYLIP	0	genome.wustl.edu	37	6	16143326	16143326	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	16143326	16143326	G	A	SNP	MYLIP	ENST00000356840	human	ensembl	74_37	+1	known	silent	c.540	p.S180	0.007	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	pfam_FERM_N,pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,pfscan_Znf_RING,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	MYLIP	HGNC	ENSG00000007944				56	0	0	33	20	37.7358
SLC17A1	0	genome.wustl.edu	37	6	25820066	25820066	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	25820066	25820066	T	C	SNP	SLC17A1	ENST00000244527	human	ensembl	74_37	-1	known	silent	c.285	p.Q95	0.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Pi_cotranspt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Pi_cotranspt	-	no_errors	SLC17A1	HGNC	ENSG00000124568				53	0	0	42	34	44.7368
SLC17A3	0	genome.wustl.edu	37	6	25850086	25850086	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	25850086	25850086	T	A	SNP	SLC17A3	ENST00000397060	human	ensembl	74_37	-1	known	missense	c.1218	p.L406F	0.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A3	HGNC	ENSG00000124564				69	0	0	34	27	44.2623
HIST1H4K	0	genome.wustl.edu	37	6	27799250	27799250	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	27799250	27799250	T	A	SNP	HIST1H4K	ENST00000357549	human	ensembl	74_37	-1	known	missense	c.56	p.H19L	1.000	superfamily_Histone-fold,smart_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4K	HGNC	ENSG00000197914				36	0	0	16	16	50
VARS2	0	genome.wustl.edu	37	6	30890003	30890003	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	30890003	30890003	G	A	SNP	VARS2	ENST00000541562	human	ensembl	74_37	+1	known	silent	c.2007	p.Q669	1.000	pfam_aa-tRNA-synth_Ia,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS2	HGNC	ENSG00000137411				95	0	0	27	27	50
HLA-DRB6	0	genome.wustl.edu	37	6	32522570	32522570	+	RNA	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	32522570	32522570	G	A	SNP	HLA-DRB6	ENST00000411500	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HLA-DRB6	HGNC	ENSG00000229391				105	0	0	27	5	15.625
SLC26A8	0	genome.wustl.edu	37	6	35965625	35965625	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	35965625	35965625	C	T	SNP	SLC26A8	ENST00000355574	human	ensembl	74_37	-1	known	missense	c.517	p.V173I	0.000	NULL	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A8	HGNC	ENSG00000112053				91	0	0	39	23	37.0968
PKHD1	0	genome.wustl.edu	37	6	51484093	51484093	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	51484093	51484093	T	C	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.12011	p.E4004G	0.834	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				50	0	0	28	28	50
MANEA	0	genome.wustl.edu	37	6	96054138	96054138	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	96054138	96054138	C	T	SNP	MANEA	ENST00000358812	human	ensembl	74_37	+1	known	missense	c.1246	p.P416S	1.000	NULL	superfamily_Glycoside_hydrolase_SF	-	no_errors	MANEA	HGNC	ENSG00000172469				39	0	0	31	19	38
MMS22L	0	genome.wustl.edu	37	6	97629852	97629852	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	97629852	97629852	T	A	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.2312	p.Q771L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263				130	0	0	64	44	40.7407
MMS22L	0	genome.wustl.edu	37	6	97629859	97629859	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	6	97629859	97629859	T	G	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.2305	p.I769L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263				131	0	0	65	51	43.9655
MUC17	0	genome.wustl.edu	37	7	100674400	100674400	+	Splice_Site	SNP	G	G	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	100674400	100674400	G	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	splice_site	c.83-1	e2-1	0.388	-	-	-	no_errors	MUC17	HGNC	ENSG00000169876				112	0	0	58	55	48.6726
MUC17	0	genome.wustl.edu	37	7	100675338	100675338	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	100675338	100675338	G	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.641	p.G214V	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				224	0	0	105	136	56.4315
MUC17	0	genome.wustl.edu	37	7	100675869	100675869	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	100675869	100675869	G	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.1172	p.G391E	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				289	0	0	147	179	54.908
PIK3CG	0	genome.wustl.edu	37	7	106508581	106508581	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	106508581	106508581	A	G	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	missense	c.575	p.D192G	1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851				53	0	0	35	23	39.6552
PIK3CG	0	genome.wustl.edu	37	7	106508825	106508825	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	106508825	106508825	C	T	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	silent	c.819	p.R273	0.429	pfam_PI3K_Ras-bd_dom,smart_PI3K_Ras-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851				41	0	0	44	17	27.8689
GPR37	0	genome.wustl.edu	37	7	124404054	124404054	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	124404054	124404054	T	C	SNP	GPR37	ENST00000303921	human	ensembl	74_37	-1	known	missense	c.977	p.K326R	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37	HGNC	ENSG00000170775				199	0	0	135	38	21.9653
GRM8	0	genome.wustl.edu	37	7	126409924	126409924	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	126409924	126409924	A	C	SNP	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	missense	c.1352	p.F451C	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603				42	0	0	46	18	28.125
PLXNA4	0	genome.wustl.edu	37	7	131859619	131859619	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	131859619	131859619	A	C	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.3935	p.I1312S	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				87	0	0	48	26	35.1351
LRGUK	0	genome.wustl.edu	37	7	133948719	133948719	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	133948719	133948719	C	T	SNP	LRGUK	ENST00000285928	human	ensembl	74_37	+1	known	missense	c.2470	p.R824C	0.611	NULL	pfam_GK/Ca_channel_bsu,pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	-	no_errors	LRGUK	HGNC	ENSG00000155530				33	0	0	19	18	48.6486
JHDM1D	0	genome.wustl.edu	37	7	139791694	139791694	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	139791694	139791694	G	A	SNP	JHDM1D	ENST00000397560	human	ensembl	74_37	-1	known	missense	c.2641	p.P881S	0.993	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	JHDM1D	HGNC	ENSG00000006459				81	0	0	21	72	77.4194
ABCB5	0	genome.wustl.edu	37	7	20685666	20685666	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	20685666	20685666	T	G	SNP	ABCB5	ENST00000404938	human	ensembl	74_37	+1	putative	missense	c.886	p.F296V	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				43	0	0	77	24	23.7624
VPS41	0	genome.wustl.edu	37	7	38783011	38783011	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	38783011	38783011	C	T	SNP	VPS41	ENST00000310301	human	ensembl	74_37	-1	known	missense	c.2113	p.D705N	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_VPS41	pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_VPS41,pfscan_Znf_RING	-	no_errors	VPS41	HGNC	ENSG00000006715				58	0	0	66	28	29.7872
POU6F2	0	genome.wustl.edu	37	7	39247061	39247061	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	39247061	39247061	A	C	SNP	POU6F2	ENST00000403058	human	ensembl	74_37	+1	known	missense	c.353	p.N118T	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536				122	0	0	184	27	12.7962
ERV3-1	0	genome.wustl.edu	37	7	64452191	64452191	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	64452191	64452191	A	G	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	missense	c.1214	p.L405P	0.480	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462				23	0	0	31	6	16.2162
MLXIPL	0	genome.wustl.edu	37	7	73008307	73008307	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	73008307	73008307	A	C	SNP	MLXIPL	ENST00000313375	human	ensembl	74_37	-1	known	missense	c.2447	p.L816R	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLXIPL	HGNC	ENSG00000009950				34	0	0	28	20	41.6667
MAGI2	0	genome.wustl.edu	37	7	78636484	78636484	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	78636484	78636484	A	C	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.340	p.L114V	1.000	smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391				41	0	0	48	34	41.4634
CACNA2D1	0	genome.wustl.edu	37	7	81746398	81746398	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	81746398	81746398	T	C	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	missense	c.488	p.H163R	1.000	pfam_VWA_N	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956				66	0	0	76	48	38.7097
PCLO	0	genome.wustl.edu	37	7	82545288	82545288	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	82545288	82545288	T	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.12014	p.K4005T	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				170	0	0	233	205	46.8037
ABCB1	0	genome.wustl.edu	37	7	87148690	87148690	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	87148690	87148690	C	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.2879	p.G960E	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563				53	0	0	57	26	31.3253
CCDC132	0	genome.wustl.edu	37	7	92983058	92983058	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	92983058	92983058	G	A	SNP	CCDC132	ENST00000305866	human	ensembl	74_37	+1	known	missense	c.2570	p.R857Q	1.000	pfam_DUF2451_C	pfam_Vacuolar_sorting-assoc_54,pfam_DUF2451_C	-	no_errors	CCDC132	HGNC	ENSG00000004766				68	0	0	154	28	15.3846
RIMS2	0	genome.wustl.edu	37	8	104955056	104955056	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	104955056	104955056	T	C	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.2603	p.L868P	1.000	superfamily_C2_dom	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				26	0	0	46	11	19.2982
ZFPM2	0	genome.wustl.edu	37	8	106813708	106813708	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	106813708	106813708	T	C	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	silent	c.1398	p.S466	0.854	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				33	0	0	89	20	18.3486
SOX7	0	genome.wustl.edu	37	8	10683705	10683705	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	10683705	10683705	G	A	SNP	SOX7	ENST00000553390	human	ensembl	74_37	-1	known	silent	c.351	p.S117	0.999	superfamily_HMG_box_dom,pfscan_HMG_box_dom	pfam_Sox_C_TAD,pfam_G_patch_dom,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_HMG_box_dom	-	no_errors	SOX7	HGNC	ENSG00000171056				16	0	0	11	3	21.4286
PKHD1L1	0	genome.wustl.edu	37	8	110476639	110476639	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	110476639	110476639	T	G	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.7578	p.F2526L	1.000	superfamily_Pectin_lyase_fold/virulence,smart_PbH1	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				20	0	0	19	19	50
CSMD3	0	genome.wustl.edu	37	8	113237068	113237068	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	113237068	113237068	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.11056	p.A3686T	0.184	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				94	0	0	118	80	40.404
CSMD3	0	genome.wustl.edu	37	8	113256779	113256779	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	113256779	113256779	T	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.10246	p.T3416S	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				48	0	0	56	26	31.7073
ZFAT	0	genome.wustl.edu	37	8	135521911	135521911	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	135521911	135521911	A	G	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.3443	p.L1148P	0.797	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				83	0	0	75	23	23.4694
FAM135B	0	genome.wustl.edu	37	8	139164740	139164740	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	139164740	139164740	C	A	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.1978	p.D660Y	0.977	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				66	0	0	80	28	25.9259
BAI1	0	genome.wustl.edu	37	8	143569806	143569806	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	143569806	143569806	G	A	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	nonsense	c.2390	p.W797*	1.000	pfam_DUF3497,prints_GPCR_2_brain-spec_angio_inhib	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790				75	0	0	61	21	25.6098
CSMD1	0	genome.wustl.edu	37	8	3855585	3855585	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	3855585	3855585	A	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.658	p.S220P	0.985	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				11	0	0	4	5	55.5556
PRKDC	0	genome.wustl.edu	37	8	48733370	48733370	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	48733370	48733370	G	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.9243	p.Y3081	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				20	0	0	29	8	21.6216
PCMTD1	0	genome.wustl.edu	37	8	52733168	52733168	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	52733168	52733168	G	T	SNP	PCMTD1	ENST00000360540	human	ensembl	74_37	-1	known	missense	c.817	p.P273T	1.000	NULL	pfam_PCMT	-	no_errors	PCMTD1	HGNC	ENSG00000168300				131	0	0	205	11	5.09259
NKAIN3	0	genome.wustl.edu	37	8	63659635	63659635	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	63659635	63659635	G	A	SNP	NKAIN3	ENST00000328472	human	ensembl	74_37	+1	known	missense	c.418	p.V140I	0.146	pfam_Na/K-Atpase_Interacting	pfam_Na/K-Atpase_Interacting	-	no_errors	NKAIN3	HGNC	ENSG00000185942				18	0	0	50	5	9.09091
CYP7B1	0	genome.wustl.edu	37	8	65527645	65527645	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	65527645	65527645	T	G	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	missense	c.995	p.K332T	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817				58	0	0	72	13	15.2941
EYA1	0	genome.wustl.edu	37	8	72184108	72184108	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	72184108	72184108	G	T	SNP	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	nonsense	c.851	p.S284*	1.000	NULL	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313				198	1	0.502513	281	79	21.9444
TRPA1	0	genome.wustl.edu	37	8	72970017	72970017	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	72970017	72970017	C	T	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	missense	c.1028	p.R343H	0.998	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321				37	0	0	51	35	40.6977
JPH1	0	genome.wustl.edu	37	8	75227106	75227106	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	75227106	75227106	C	G	SNP	JPH1	ENST00000342232	human	ensembl	74_37	-1	known	missense	c.1129	p.A377P	1.000	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH1	HGNC	ENSG00000104369				98	0	0	101	68	40.2367
LRRCC1	0	genome.wustl.edu	37	8	86041417	86041417	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	86041417	86041417	G	A	SNP	LRRCC1	ENST00000360375	human	ensembl	74_37	+1	known	missense	c.1429	p.E477K	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin	-	no_errors	LRRCC1	HGNC	ENSG00000133739				113	0	0	133	37	21.7647
ABCA1	0	genome.wustl.edu	37	9	107645431	107645431	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	107645431	107645431	G	A	SNP	ABCA1	ENST00000374736	human	ensembl	74_37	-1	known	missense	c.310	p.R104C	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029				53	0	0	46	43	48.3146
PAPPA	0	genome.wustl.edu	37	9	118949686	118949686	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	118949686	118949686	A	C	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.669	p.Q223H	0.997	superfamily_ConA-like_lec_gl_sf,smart_LamG-like	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				33	0	0	57	13	18.5714
ASTN2	0	genome.wustl.edu	37	9	119903754	119903754	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	119903754	119903754	G	A	SNP	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	missense	c.1019	p.A340V	1.000	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219				28	0	0	18	32	64
NUP214	0	genome.wustl.edu	37	9	134015972	134015972	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	134015972	134015972	T	C	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.1169	p.M390T	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				91	0	0	74	121	62.0513
AK8	0	genome.wustl.edu	37	9	135742311	135742311	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	135742311	135742311	C	T	SNP	AK8	ENST00000298545	human	ensembl	74_37	-1	known	missense	c.199	p.A67T	0.997	pfam_Adenylate_kin,superfamily_P-loop_NTPase	pfam_Adenylate_kin,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin	-	no_errors	AK8	HGNC	ENSG00000165695				64	0	0	41	77	65.2542
GTF3C5	0	genome.wustl.edu	37	9	135926199	135926199	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	135926199	135926199	G	A	SNP	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	missense	c.602	p.G201D	0.105	pfam_TF_IIIC_su-5	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308				71	0	0	110	23	17.2932
PMPCA	0	genome.wustl.edu	37	9	139313586	139313586	+	RNA	SNP	G	G	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	139313586	139313586	G	T	SNP	PMPCA	ENST00000462616	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PMPCA	HGNC	ENSG00000165688				43	0	0	63	32	33.6842
ENTPD2	0	genome.wustl.edu	37	9	139946039	139946039	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	139946039	139946039	C	T	SNP	ENTPD2	ENST00000355097	human	ensembl	74_37	-1	known	silent	c.309	p.A103	0.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD2	HGNC	ENSG00000054179				52	0	0	52	4	7.14286
MLLT3	0	genome.wustl.edu	37	9	20414346	20414346	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	20414346	20414346	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.498	p.S166	0.975	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843				40	0	0	72	4	5.26316
TRPM6	0	genome.wustl.edu	37	9	77454993	77454993	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	77454993	77454993	A	C	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	missense	c.491	p.V164G	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121				92	0	0	55	43	43.8776
AGTPBP1	0	genome.wustl.edu	37	9	88203282	88203282	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	88203282	88203282	T	G	SNP	AGTPBP1	ENST00000376109	human	ensembl	74_37	-1	known	missense	c.2870	p.Q957P	1.000	pfam_Peptidase_M14	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGTPBP1	HGNC	ENSG00000135049				27	0	0	43	12	21.8182
S1PR3	0	genome.wustl.edu	37	9	91616715	91616715	+	Silent	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	91616715	91616715	C	T	SNP	S1PR3	ENST00000358157	human	ensembl	74_37	+1	known	silent	c.600	p.C200	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_S1P_rcpt,prints_GPCR_Rhodpsn,prints_Cnbnoid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG3_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn,prints_EDG1_rcpt,prints_Cnbnoid_rcpt	-	no_errors	S1PR3	HGNC	ENSG00000213694				62	0	0	81	18	18.1818
IPPK	0	genome.wustl.edu	37	9	95400381	95400381	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	95400381	95400381	G	A	SNP	IPPK	ENST00000287996	human	ensembl	74_37	-1	known	missense	c.818	p.S273L	0.186	pfam_Ins_P5_2-kin	pfam_Ins_P5_2-kin	-	no_errors	IPPK	HGNC	ENSG00000127080				19	0	0	23	6	20.6897
XKRX	0	genome.wustl.edu	37	X	100177864	100177864	+	Silent	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	100177864	100177864	G	A	SNP	XKRX	ENST00000328526	human	ensembl	74_37	-1	known	silent	c.561	p.I187	0.995	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKRX	HGNC	ENSG00000182489				57	0	0	48	32	40
COL4A5	0	genome.wustl.edu	37	X	107936061	107936061	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	107936061	107936061	A	G	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	missense	c.4612	p.R1538G	1.000	pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153				24	0	0	27	32	54.2373
CT47B1	0	genome.wustl.edu	37	X	120009284	120009284	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	120009284	120009284	C	T	SNP	CT47B1	ENST00000371311	human	ensembl	74_37	-1	known	missense	c.241	p.A81T	0.000	NULL	NULL	-	no_errors	CT47B1	HGNC	ENSG00000236446				19	0	0	22	23	51.1111
DCAF12L2	0	genome.wustl.edu	37	X	125298575	125298575	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	125298575	125298575	C	G	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	missense	c.1333	p.V445L	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354				51	0	0	57	34	37.3626
FAM45B	0	genome.wustl.edu	37	X	129629682	129629682	+	RNA	SNP	G	G	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	129629682	129629682	G	A	SNP	FAM45B	ENST00000592932	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.459	-	-	-	no_errors	FAM45B	HGNC	ENSG00000221930				44	0	0	37	37	50
PASD1	0	genome.wustl.edu	37	X	150840247	150840247	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	150840247	150840247	A	C	SNP	PASD1	ENST00000370357	human	ensembl	74_37	+1	known	missense	c.1433	p.N478T	0.000	NULL	superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC	ENSG00000166049				18	0	0	16	23	58.9744
ZBED1	0	genome.wustl.edu	37	X	2406722	2406722	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	2406722	2406722	C	A	SNP	ZBED1	ENST00000381218	human	ensembl	74_37	-1	known	missense	c.2039	p.G680V	0.162	NULL	pfam_HATC_dom_C,pfam_Znf_BED_prd,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED1	HGNC	ENSG00000214717				62	0	0	28	3	9.67742
DMD	0	genome.wustl.edu	37	X	32490353	32490353	+	Silent	SNP	T	T	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	32490353	32490353	T	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	silent	c.2877	p.E959	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				45	0	0	36	32	47.0588
TIMM17B	0	genome.wustl.edu	37	X	48754135	48754135	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	48754135	48754135	C	T	SNP	TIMM17B	ENST00000396779	human	ensembl	74_37	-1	known	nonsense	c.33	p.W11*	1.000	pfam_Tim17/Tim22/Tim23/PMP24	pfam_Tim17/Tim22/Tim23/PMP24	-	no_errors	TIMM17B	HGNC	ENSG00000126768				25	0	0	24	16	40
USP51	0	genome.wustl.edu	37	X	55513611	55513611	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	55513611	55513611	A	C	SNP	USP51	ENST00000500968	human	ensembl	74_37	-1	known	missense	c.1762	p.L588V	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP51	HGNC	ENSG00000247746				32	0	0	30	21	41.1765
LPAR4	0	genome.wustl.edu	37	X	78011422	78011422	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	78011422	78011422	A	C	SNP	LPAR4	ENST00000435339	human	ensembl	74_37	+1	known	missense	c.1056	p.E352D	0.663	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	LPAR4	HGNC	ENSG00000147145				39	0	0	34	36	51.4286
POU3F4	0	genome.wustl.edu	37	X	82763585	82763585	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	82763585	82763585	C	T	SNP	POU3F4	ENST00000373200	human	ensembl	74_37	+1	known	missense	c.253	p.R85C	1.000	pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F4	HGNC	ENSG00000196767				10	0	0	5	4	44.4444
NELL1	0	genome.wustl.edu	37	11	21596648	21596649	+	RNA	INS	-	-	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	21596648	21596649	-	T	INS	NELL1	ENST00000529218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	NELL1	HGNC	ENSG00000165973				9	0	0	14	6	30
FAM111B	0	genome.wustl.edu	37	11	58892377	58892377	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	11	58892377	58892377	A	-	DEL	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	frame_shift_del	c.807	p.K272fs	0.000	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				35	0	0	54	6	10
KSR2	0	genome.wustl.edu	37	12	118198972	118198972	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	12	118198972	118198972	G	-	DEL	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.P277fs	0.998	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435				214	0	0	172	59	25.5411
POLDIP2	0	genome.wustl.edu	37	17	26684390	26684391	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	26684390	26684391	-	C	INS	POLDIP2	ENST00000540200	human	ensembl	74_37	-1	known	frame_shift_ins	c.82_81	p.P27fs	0.174:0.160	NULL	pfam_ApaG_domain,pfam_Hemimethylated_DNA-bd_dom,superfamily_ApaG_domain,superfamily_Hemimethylated_DNA-bd_dom,pfscan_ApaG_domain	-	no_errors	POLDIP2	HGNC	ENSG00000004142				8	0	0	4	2	33.3333
EFCAB5	0	genome.wustl.edu	37	17	28384851	28384852	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	28384851	28384852	-	T	INS	EFCAB5	ENST00000394835	human	ensembl	74_37	+1	known	frame_shift_ins	c.2523_2524	p.K843fs	0.010:0.977	NULL	pfscan_EF_hand_dom	-	no_errors	EFCAB5	HGNC	ENSG00000176927				75	0	0	103	25	19.5312
PSMC5	0	genome.wustl.edu	37	17	61907794	61907796	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	17	61907794	61907796	AAG	-	DEL	PSMC5	ENST00000310144	human	ensembl	74_37	+1	known	in_frame_del	c.485_487	p.E163in_frame_del	1.000:0.999:1.000	superfamily_P-loop_NTPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC5	HGNC	ENSG00000087191				73	0	0	35	21	37.5
PIGN	0	genome.wustl.edu	37	18	59742019	59742021	+	In_Frame_Del	DEL	ATA	ATA	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	ATA	ATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	59742019	59742021	ATA	-	DEL	PIGN	ENST00000357637	human	ensembl	74_37	-1	known	in_frame_del	c.2612_2610	p.I870in_frame_del	1.000:0.998:0.599	pfam_GPI_EtnP_transferase_1_C	pfam_GPI_EtnP_transferase_1_C,pfam_Phosphodiest/P_Trfase,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGN	HGNC	ENSG00000197563				24	0	0	14	15	51.7241
VAPA	0	genome.wustl.edu	37	18	9931832	9931846	+	In_Frame_Del	DEL	AAATCTTAAATTGCG	AAATCTTAAATTGCG	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	AAATCTTAAATTGCG	AAATCTTAAATTGCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	18	9931832	9931846	AAATCTTAAATTGCG	-	DEL	VAPA	ENST00000340541	human	ensembl	74_37	+1	known	in_frame_del	c.105_119	p.LKLRN37in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:0.997:1.000:1.000:0.961:1.000:1.000:0.997:1.000:1.000	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	-	no_errors	VAPA	HGNC	ENSG00000101558				91	0	0	56	23	29.1139
APC	0	genome.wustl.edu	37	5	112175951	112175952	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	5	112175951	112175952	-	A	INS	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_ins	c.4660_4661	p.T1556fs	0.925:0.945	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				63	0	0	28	34	54.8387
INTS4L2	0	genome.wustl.edu	37	7	65150713	65150714	+	RNA	INS	-	-	A			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	7	65150713	65150714	-	A	INS	INTS4L2	ENST00000430126	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.995	-	-	-	no_errors	INTS4L2	HGNC	ENSG00000232270				26	0	0	29	7	19.4444
ENSG00000199405	0	genome.wustl.edu	37	8	56815414	56815414	+	RNA	DEL	T	T	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	8	56815414	56815414	T	-	DEL	ENSG00000199405	ENST00000362535	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.582	-	-	-	no_errors	SNORA1	RFAM	ENSG00000199405				10	0	0	10	4	28.5714
TMEM245	0	genome.wustl.edu	37	9	111798631	111798632	+	In_Frame_Ins	INS	-	-	TGGCACTGC			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	111798631	111798632	-	TGGCACTGC	INS	TMEM245	ENST00000374586	human	ensembl	74_37	-1	known	in_frame_ins	c.2254_2253	p.751in_frame_insAVP	1.000:0.472	pfam_UPF0118	pfam_UPF0118	-	no_errors	TMEM245	HGNC	ENSG00000106771				47	0	0	41	6	12.766
ZNF79	0	genome.wustl.edu	37	9	130207312	130207313	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	130207312	130207313	TA	-	DEL	ZNF79	ENST00000342483	human	ensembl	74_37	+1	known	frame_shift_del	c.1333_1334	p.Y445fs	0.993:0.902	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF79	HGNC	ENSG00000196152				112	0	0	123	26	17.4497
HRCT1	0	genome.wustl.edu	37	9	35906584	35906586	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	35906584	35906586	CCA	-	DEL	HRCT1	ENST00000354323	human	ensembl	74_37	+1	known	in_frame_del	c.300_302	p.H104in_frame_del	0.016:0.009:0.003	NULL	NULL	-	no_errors	HRCT1	HGNC	ENSG00000196196				8	0	0	20	3	13.0435
CNTNAP3B	0	genome.wustl.edu	37	9	43844265	43844265	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	9	43844265	43844265	G	-	DEL	CNTNAP3B	ENST00000377564	human	ensembl	74_37	+1	known	frame_shift_del	c.1599	p.L534fs	0.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3B	HGNC	ENSG00000154529				43	0	0	49	5	9.25926
DUSP9	0	genome.wustl.edu	37	X	152915673	152915674	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	152915673	152915674	-	G	INS	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	frame_shift_ins	c.1068_1069	p.Q358fs	0.006:0.150	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829				74	0	0	57	29	33.7209
ATRX	0	genome.wustl.edu	37	X	76937769	76937770	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	76937769	76937770	-	T	INS	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_ins	c.2979_2978	p.K994fs	0.993:0.997	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224				35	0	0	80	61	43.2624
CYLC1	0	genome.wustl.edu	37	X	83129336	83129336	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CD-8535-01A-11D-2340-08	TCGA-CD-8535-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2bf27b50-c850-413f-8c3c-c70f47612721	10b5ccce-a8cf-45c5-bef4-4b452366c67e	X	83129336	83129336	T	-	DEL	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	frame_shift_del	c.1620	p.S541fs	0.065	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035				23	0	0	28	15	34.8837
